1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/* Programmer: Robb Matzke <matzke@llnl.gov>
* Friday, September 19, 1997
*
*/
#define H5F_PACKAGE /*suppress error about including H5Fpkg */
#define H5G_PACKAGE /*suppress error about including H5Gpkg */
/* Packages needed by this file... */
#include "H5private.h" /* Generic Functions */
#include "H5Eprivate.h" /* Error handling */
#include "H5Fpkg.h" /* File access */
#include "H5Gpkg.h" /* Groups */
#include "H5HLprivate.h" /* Local Heaps */
#include "H5MMprivate.h" /* Memory management */
/* Private prototypes */
/*-------------------------------------------------------------------------
* Function: H5G_stab_create
*
* Purpose: Creates a new empty symbol table (object header, name heap,
* and B-tree). The caller can specify an initial size for the
* name heap. The object header of the group is opened for
* write access.
*
* In order for the B-tree to operate correctly, the first
* item in the heap is the empty string, and must appear at
* heap offset zero.
*
* Errors:
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 1 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5G_stab_create(H5F_t *f, hid_t dxpl_id, size_t init, H5G_entry_t *self/*out*/)
{
size_t name; /*offset of "" name */
H5O_stab_t stab; /*symbol table message */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5G_stab_create, FAIL)
/*
* Check arguments.
*/
HDassert(f);
HDassert(self);
init = MAX(init, H5HL_SIZEOF_FREE(f) + 2);
/* Create symbol table private heap */
if (H5HL_create(f, dxpl_id, init, &(stab.heap_addr)/*out*/)<0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "can't create heap")
name = H5HL_insert(f, dxpl_id, stab.heap_addr, 1, "");
if ((size_t)(-1)==name)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "can't initialize heap")
/*
* B-tree's won't work if the first name isn't at the beginning
* of the heap.
*/
assert(0 == name);
/* Create the B-tree */
if (H5B_create(f, dxpl_id, H5B_SNODE, NULL, &(stab.btree_addr)/*out*/) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "can't create B-tree")
/*
* Create symbol table object header. It has a zero link count
* since nothing refers to it yet. The link count will be
* incremented if the object is added to the group directed graph.
*/
if (H5O_create(f, dxpl_id, 4 + 2 * H5F_SIZEOF_ADDR(f), self/*out*/) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "can't create header")
/*
* Insert the symbol table message into the object header and the symbol
* table entry.
*/
if (H5O_modify(self, H5O_STAB_ID, H5O_NEW_MESG, H5O_FLAG_CONSTANT, H5O_UPDATE_TIME, &stab, dxpl_id)<0) {
H5O_close(self);
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "can't create message")
}
self->cache.stab.btree_addr = stab.btree_addr;
self->cache.stab.heap_addr = stab.heap_addr;
self->type = H5G_CACHED_STAB;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_stab_create() */
/*-------------------------------------------------------------------------
* Function: H5G_stab_find
*
* Purpose: Finds a symbol named NAME in the symbol table whose
* description is stored in GRP_ENT in file F and returns its
* symbol table entry through OBJ_ENT (which is optional).
*
* Errors:
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 1 1997
*
* Modifications:
*
* Pedro Vicente, <pvn@ncsa.uiuc.edu> 22 Aug 2002
* Added `id to name' support.
* Added a deep copy of the symbol table entry
*
*-------------------------------------------------------------------------
*/
herr_t
H5G_stab_find(H5G_entry_t *grp_ent, const char *name,
H5G_entry_t *obj_ent/*out*/, hid_t dxpl_id)
{
H5G_bt_ud1_t udata; /*data to pass through B-tree */
H5O_stab_t stab; /*symbol table message */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5G_stab_find, FAIL)
/* Check arguments */
assert(grp_ent);
assert(grp_ent->file);
assert(obj_ent);
assert(name && *name);
/* set up the udata */
if (NULL == H5O_read(grp_ent, H5O_STAB_ID, 0, &stab, dxpl_id))
HGOTO_ERROR(H5E_SYM, H5E_BADMESG, FAIL, "can't read message")
udata.common.name = name;
udata.common.heap_addr = stab.heap_addr;
udata.ent = obj_ent;
/* search the B-tree */
if (H5B_find(grp_ent->file, dxpl_id, H5B_SNODE, stab.btree_addr, &udata) < 0)
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "not found")
/* Set the name for the symbol entry OBJ_ENT */
if (H5G_ent_set_name( grp_ent, obj_ent, name ) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "cannot insert name")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_stab_find() */
/*-------------------------------------------------------------------------
* Function: H5G_stab_insert
*
* Purpose: Insert a new symbol into the table described by GRP_ENT in
* file F. The name of the new symbol is NAME and its symbol
* table entry is OBJ_ENT.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 1 1997
*
*-------------------------------------------------------------------------
*/
herr_t
H5G_stab_insert(H5G_entry_t *grp_ent, const char *name, H5G_entry_t *obj_ent,
hbool_t inc_link, hid_t dxpl_id)
{
H5O_stab_t stab; /*symbol table message */
H5G_bt_ud1_t udata; /*data to pass through B-tree */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5G_stab_insert, FAIL)
/* check arguments */
assert(grp_ent && grp_ent->file);
assert(name && *name);
assert(obj_ent && obj_ent->file);
if (grp_ent->file->shared != obj_ent->file->shared)
HGOTO_ERROR(H5E_SYM, H5E_LINK, FAIL, "interfile hard links are not allowed")
/* Set the name for the symbol entry OBJ_ENT */
if (H5G_ent_set_name( grp_ent, obj_ent, name ) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "cannot insert name")
/* initialize data to pass through B-tree */
if (NULL == H5O_read(grp_ent, H5O_STAB_ID, 0, &stab, dxpl_id))
HGOTO_ERROR(H5E_SYM, H5E_BADMESG, FAIL, "not a symbol table")
udata.common.name = name;
udata.common.heap_addr = stab.heap_addr;
udata.ent = obj_ent;
/* insert */
if (H5B_insert(grp_ent->file, dxpl_id, H5B_SNODE, stab.btree_addr, &udata) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINSERT, FAIL, "unable to insert entry")
/* Increment link count on object, if appropriate */
if(inc_link)
if (H5O_link(obj_ent, 1, dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_LINK, FAIL, "unable to increment hard link count")
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5G_stab_remove
*
* Purpose: Remove NAME from a symbol table.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Thursday, September 17, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5G_stab_remove(H5G_entry_t *grp_ent, const char *name, hid_t dxpl_id)
{
H5O_stab_t stab; /*symbol table message */
H5G_bt_ud2_t udata; /*data to pass through B-tree */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5G_stab_remove, FAIL)
assert(grp_ent && grp_ent->file);
assert(name && *name);
/* initialize data to pass through B-tree */
if (NULL==H5O_read(grp_ent, H5O_STAB_ID, 0, &stab, dxpl_id))
HGOTO_ERROR(H5E_SYM, H5E_BADMESG, FAIL, "not a symbol table")
udata.common.name = name;
udata.common.heap_addr = stab.heap_addr;
udata.adj_link = TRUE;
/* remove */
if (H5B_remove(grp_ent->file, dxpl_id, H5B_SNODE, stab.btree_addr, &udata)<0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to remove entry")
done:
FUNC_LEAVE_NOAPI(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5G_stab_delete
*
* Purpose: Delete entire symbol table information from file
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Thursday, March 20, 2003
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5G_stab_delete(H5F_t *f, hid_t dxpl_id, const H5O_stab_t *stab, hbool_t adj_link)
{
H5G_bt_ud2_t udata; /*data to pass through B-tree */
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI(H5G_stab_delete, FAIL);
assert(f);
assert(stab);
assert(H5F_addr_defined(stab->btree_addr));
assert(H5F_addr_defined(stab->heap_addr));
/* Set up user data for B-tree deletion */
udata.common.name = NULL;
udata.common.heap_addr = stab->heap_addr;
udata.adj_link = adj_link;
/* Delete entire B-tree */
if(H5B_delete(f, dxpl_id, H5B_SNODE, stab->btree_addr, &udata)<0)
HGOTO_ERROR(H5E_SYM, H5E_CANTDELETE, FAIL, "unable to delete symbol table B-tree");
/* Delete local heap for names */
if(H5HL_delete(f, dxpl_id, stab->heap_addr)<0)
HGOTO_ERROR(H5E_SYM, H5E_CANTDELETE, FAIL, "unable to delete symbol table heap");
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5G_stab_delete() */
/*-------------------------------------------------------------------------
* Function: H5G_stab_copy_tmp
*
* Purpose: copy a group symbol table and memeber objects from SRC file to DST file.
*
* Return: Non-negative on success
* Negative on failure.
*
* Programmer: Peter Cao
* September 10, 2005
*
* Note: This routine should be replaced with proper call to "real"
* stab creation routine after the "big group revision" checkin
* occurs. -QAK
*
*-------------------------------------------------------------------------
*/
herr_t
H5G_stab_copy_tmp(H5F_t *f_dst, H5O_stab_t *stab_dst, hid_t dxpl_id)
{
size_t size_init, name_offset;
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5G_stab_copy_tmp, FAIL)
HDassert(f_dst);
HDassert(stab_dst);
/* create B-tree private heap */
size_init = MAX(H5G_SIZE_HINT, H5HL_SIZEOF_FREE(f_dst) + 2);
if (H5HL_create(f_dst, dxpl_id, size_init, &(stab_dst->heap_addr))<0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "can't create heap")
name_offset = H5HL_insert(f_dst, dxpl_id, stab_dst->heap_addr, 1, "");
if ((size_t)(-1)==name_offset)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "can't initialize heap")
assert(0 == name_offset);
/* create the B-tree */
if (H5B_create(f_dst, dxpl_id, H5B_SNODE, NULL, &(stab_dst->btree_addr)) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "can't create B-tree")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_stab_copy_tmp() */
|