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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* Programmer: Quincey Koziol <koziol@ncsa.uiuc.edu>
* Friday, February 24, 2006
*
* Purpose: This file contains declarations which are visible only within
* the H5HF package. Source files outside the H5HF package should
* include H5HFprivate.h instead.
*/
#ifndef H5HF_PACKAGE
#error "Do not include this file outside the H5HF package!"
#endif
#ifndef _H5HFpkg_H
#define _H5HFpkg_H
/* Get package's private header */
#include "H5HFprivate.h"
/* Other private headers needed by this file */
#include "H5ACprivate.h" /* Metadata cache */
#include "H5FLprivate.h" /* Free Lists */
#include "H5FSprivate.h" /* File free space */
#include "H5SLprivate.h" /* Skip lists */
/**************************/
/* Package Private Macros */
/**************************/
/* Size of signature information (on disk) */
#define H5HF_SIZEOF_MAGIC 4
/* Fractal heap signatures */
#define H5HF_HDR_MAGIC "FRHP" /* Header */
#define H5HF_DBLOCK_MAGIC "FHDB" /* Direct block */
#define H5HF_IBLOCK_MAGIC "FHIB" /* Indirect block */
/* "Standard" size of prefix information for fractal heap metadata */
#define H5HF_METADATA_PREFIX_SIZE ( \
4 /* Signature */ \
+ 1 /* Version */ \
+ 1 /* Metadata flags */ \
+ 4 /* Metadata checksum */ \
)
/* Size of doubling-table information */
#define H5HF_DTABLE_INFO_SIZE(h) ( \
2 /* Width of table (i.e. # of columns) */ \
+ (h)->sizeof_size /* Starting block size */ \
+ (h)->sizeof_size /* Maximum direct block size */ \
+ 2 /* Max. size of heap (log2 of actual value - i.e. the # of bits) */ \
+ 2 /* Starting # of rows in root indirect block */ \
+ (h)->sizeof_addr /* File address of table managed */ \
+ 2 /* Current # of rows in root indirect block */ \
)
/* Size of the fractal heap header on disk */
#define H5HF_HEADER_SIZE(h) ( \
/* General metadata fields */ \
H5HF_METADATA_PREFIX_SIZE \
\
/* Fractal heap header specific fields */ \
+ 1 /* Address mapping mode */ \
+ 4 /* Min. size of standalone object */ \
+ (h)->sizeof_size /* Total man. free space */ \
+ (h)->sizeof_size /* Total std. free entries */ \
+ (h)->sizeof_addr /* File address of free section header */ \
+ (h)->sizeof_size /* Total size of heap */ \
+ (h)->sizeof_size /* Size of man. space in heap */ \
+ (h)->sizeof_size /* Size of alloacted man. space in heap */ \
+ (h)->sizeof_size /* Size of std. space in heap */ \
+ (h)->sizeof_size /* Number of objects in heap */ \
+ H5HF_DTABLE_INFO_SIZE(h) /* Size of managed obj. doubling-table info */ \
)
/* Size of overhead for a direct block */
#define H5HF_MAN_ABS_DIRECT_OVERHEAD(h) ( \
/* General metadata fields */ \
H5HF_METADATA_PREFIX_SIZE \
\
/* Fractal heap managed, absolutely mapped direct block specific fields */ \
+ (h)->sizeof_addr /* File address of heap owning the block */ \
+ (h)->heap_off_size /* Offset of the block in the heap */ \
)
/* Size of managed indirect block (absolute & mapped) */
#define H5HF_MAN_INDIRECT_SIZE(h, i) ( \
/* General metadata fields */ \
H5HF_METADATA_PREFIX_SIZE \
\
/* Fractal heap managed, absolutely mapped indirect block specific fields */ \
+ (h)->sizeof_addr /* File address of heap owning the block */ \
+ (h)->heap_off_size /* Offset of the block in the heap */ \
+ (MIN((i)->nrows, (h)->man_dtable.max_direct_rows) * (h)->man_dtable.cparam.width * (h)->sizeof_addr) /* Size of entries for direct blocks */ \
+ ((((i)->nrows > (h)->man_dtable.max_direct_rows) ? ((i)->nrows - (h)->man_dtable.max_direct_rows) : 0) * (h)->man_dtable.cparam.width * (h)->sizeof_addr) /* Size of entries for indirect blocks */ \
)
/* Compute the # of bytes required to store an offset into a given buffer size */
#define H5HF_SIZEOF_OFFSET_BITS(b) (((b) + 7) / 8)
#define H5HF_SIZEOF_OFFSET_LEN(l) H5HF_SIZEOF_OFFSET_BITS(H5V_log2_of2((unsigned)(l)))
/* Free space section types for fractal heap */
/* (values stored in free space data structures in file) */
#define H5FS_SECT_FHEAP_SINGLE 0 /* Section is actual bytes in a direct block */
#define H5FS_SECT_FHEAP_RANGE 1 /* Section is a range of direct blocks */
#define H5FS_SECT_FHEAP_INDIRECT 2 /* Section is a range of _indirect_ blocks in an indirect block row */
/****************************/
/* Package Private Typedefs */
/****************************/
/* Doubling-table info */
typedef struct H5HF_dtable_t {
/* Immutable, pre-set information for table */
H5HF_dtable_cparam_t cparam; /* Creation parameters for table */
/* Derived information (stored, varies during lifetime of table) */
haddr_t table_addr; /* Address of first block for table */
/* Undefined if no space allocated for table */
unsigned curr_root_rows; /* Current number of rows in the root indirect block */
/* 0 indicates that the TABLE_ADDR field points
* to direct block (of START_BLOCK_SIZE) instead
* of indirect root block.
*/
/* Computed information (not stored) */
unsigned max_root_rows; /* Maximum # of rows in root indirect block */
unsigned max_direct_rows; /* Maximum # of direct rows in any indirect block */
unsigned max_dir_blk_off_size; /* Max. size of offsets in direct blocks */
unsigned first_row_bits; /* # of bits in address of first row */
hsize_t num_id_first_row; /* Number of IDs in first row of table */
hsize_t *row_block_size; /* Block size per row of indirect block */
hsize_t *row_block_off; /* Cumulative offset per row of indirect block */
hsize_t *row_dblock_free; /* Free space in dblocks for this row */
/* (For indirect block rows, it's the total
* free space in all direct blocks referenced
* from the indirect block
*/
} H5HF_dtable_t;
/* Fractal heap free list info (forward decl - defined in H5HFflist.c) */
typedef struct H5HF_freelist_t H5HF_freelist_t;
/* Forward decl indirect block info */
typedef struct H5HF_indirect_t H5HF_indirect_t;
/* Fractal heap block location */
typedef struct H5HF_block_loc_t {
/* Necessary table fields */
unsigned row; /* Row of block in doubling table */
unsigned col; /* Column of block in doubling table */
/* Derived/computed/cached table fields */
unsigned entry; /* Entry of block in doubling table */
/* Infrastructure */
H5HF_indirect_t *context; /* Pointer to the indirect block containing the block */
struct H5HF_block_loc_t *up; /* Pointer to next level up in the stack of levels */
} H5HF_block_loc_t;
/* Fractal heap block iterator info */
typedef struct H5HF_block_iter_t {
hbool_t ready; /* Set if iterator is finished initializing */
H5HF_block_loc_t *curr; /* Pointer to the current level information for iterator */
} H5HF_block_iter_t;
/* Fractal heap free space section info */
typedef struct H5HF_free_section_t {
H5FS_section_info_t sect_info; /* Free space section information (must be first in struct) */
union {
struct {
H5HF_indirect_t *parent; /* Indirect block parent for free section's direct block */
unsigned par_entry; /* Entry of free section's direct block in parent indirect block */
/* (Needed to retrieve direct block) */
haddr_t dblock_addr; /* Address of direct block for free section */
size_t dblock_size; /* Size of direct block */
/* (Needed to retrieve direct block) */
} single;
struct {
H5HF_indirect_t *iblock; /* Indirect block for free section */
unsigned row; /* Row for range of blocks */
unsigned col; /* Column for range of blocks */
unsigned num_entries; /* Number of entries covered */
} range;
struct {
H5HF_indirect_t *iblock; /* Indirect block for free section */
unsigned row; /* Row for range of blocks */
unsigned col; /* Column for range of blocks */
unsigned num_entries; /* Number of entries covered */
unsigned indir_row; /* Row for indirect range of blocks */
unsigned indir_nrows; /* Number of rows in indirect blocks */
} indirect;
} u;
} H5HF_free_section_t;
/* The fractal heap header information */
/* (Each fractal heap header has certain information that is shared across all
* the instances of blocks in that fractal heap)
*/
typedef struct H5HF_hdr_t {
/* Information for H5AC cache functions, _must_ be first field in structure */
H5AC_info_t cache_info;
/* Shared internal information (varies during lifetime of heap) */
hsize_t total_man_free; /* Total amount of free space in managed blocks */
hsize_t total_std_free; /* Total # of free standalone ID entries */
haddr_t fs_addr; /* Address of free space header on disk */
/* Statistics for heap */
hsize_t total_size; /* Total amount of space used by heap (managed & standalone) */
hsize_t man_size; /* Total amount of managed space in heap */
hsize_t man_alloc_size; /* Total amount of allocated managed space in heap */
hsize_t std_size; /* Total amount of standalone space in heap */
hsize_t nobjs; /* Number of objects in heap */
/* Cached/computed values (not stored in header) */
size_t rc; /* Reference count of child blocks */
hbool_t dirty; /* Shared info is modified */
haddr_t heap_addr; /* Address of heap header in the file */
H5AC_protect_t mode; /* Access mode for heap */
H5F_t *f; /* Pointer to file for heap */
size_t sizeof_size; /* Size of file sizes */
size_t sizeof_addr; /* Size of file addresses */
size_t id_len; /* Size of heap IDs */
size_t nsect_classes; /* Number of free space section classes */
H5FS_section_class_t *sect_cls; /* Array of free space section classes */
H5FS_t *fspace; /* Free space list for objects in heap */
hbool_t fspace_open; /* Whether free space is ready */
H5HF_block_iter_t next_block; /* Block iterator for searching for next block with space */
/* Doubling table information */
/* (Partially set by user, partially derived/updated internally) */
H5HF_dtable_t man_dtable; /* Doubling-table info for managed objects */
H5HF_dtable_t std_dtable; /* Doubling-table info for standalone objects */
/* Information set by user */
H5HF_addrmap_t addrmap; /* Type of address mapping */
uint32_t standalone_size; /* Size of object to store standalone */
/* Information derived from user parameters (not stored in header) */
unsigned char heap_off_size; /* Size of heap offsets (in bytes) */
hbool_t debug_objs; /* Is the heap storing objects in 'debug' format */
hbool_t have_io_filter; /* Does the heap have I/O filters for the direct blocks? */
hbool_t write_once; /* Is heap being written in "write once" mode? */
} H5HF_hdr_t;
/* Indirect block entry */
typedef struct H5HF_indirect_ent_t {
haddr_t addr; /* Direct block's address */
/* XXX: Will need space for block size, for blocks with I/O filters */
} H5HF_indirect_ent_t;
/* Fractal heap indirect block */
struct H5HF_indirect_t {
/* Information for H5AC cache functions, _must_ be first field in structure */
H5AC_info_t cache_info;
/* Internal heap information (not stored) */
size_t rc; /* Reference count of child blocks */
hbool_t dirty; /* Info is modified */
H5HF_hdr_t *hdr; /* Shared heap header info */
struct H5HF_indirect_t *parent; /* Shared parent indirect block info */
unsigned par_entry; /* Entry in parent's table */
haddr_t addr; /* Address of this indirect block on disk */
unsigned nrows; /* Total # of rows in indirect block */
unsigned max_rows; /* Max. # of rows in indirect block */
size_t size; /* Size of indirect block on disk */
/* Stored values */
hsize_t block_off; /* Offset of the block within the heap's address space */
H5HF_indirect_ent_t *ents; /* Pointer to block entry table */
};
/* A fractal heap direct block */
typedef struct H5HF_direct_t {
/* Information for H5AC cache functions, _must_ be first field in structure */
H5AC_info_t cache_info;
/* Internal heap information */
H5HF_hdr_t *hdr; /* Shared heap header info */
H5HF_indirect_t *parent; /* Shared parent indirect block info */
unsigned par_entry; /* Entry in parent's table */
size_t size; /* Size of direct block */
unsigned blk_off_size; /* Size of offsets in the block */
uint8_t *blk; /* Pointer to buffer containing block data */
/* Stored values */
hsize_t block_off; /* Offset of the block within the heap's address space */
} H5HF_direct_t;
/* Fractal heap */
struct H5HF_t {
H5HF_hdr_t *hdr; /* Pointer to internal fractal heap header info */
unsigned fo_count; /* Open object count for file */
};
/* Fractal heap metadata statistics info */
typedef struct H5HF_stat_t {
hsize_t total_size; /* Total size of heap allocated (man & std) */
hsize_t man_size; /* Total size of managed space in heap */
hsize_t std_size; /* Total size of standalone space in heap */
hsize_t man_free_space; /* Free space within heap */
hsize_t nobjs; /* Number of objects in heap */
} H5HF_stat_t;
/* Fractal heap "parent info" (for loading a block) */
typedef struct H5HF_parent_t {
H5HF_hdr_t *hdr; /* Pointer to heap header info */
H5HF_indirect_t *iblock; /* Pointer to parent indirect block */
unsigned entry; /* Location of block in parent's entry table */
} H5HF_parent_t;
/*****************************/
/* Package Private Variables */
/*****************************/
/* H5HF header inherits cache-like properties from H5AC */
H5_DLLVAR const H5AC_class_t H5AC_FHEAP_HDR[1];
/* H5HF direct block inherits cache-like properties from H5AC */
H5_DLLVAR const H5AC_class_t H5AC_FHEAP_DBLOCK[1];
/* H5HF indirect block inherits cache-like properties from H5AC */
H5_DLLVAR const H5AC_class_t H5AC_FHEAP_IBLOCK[1];
/* H5HF single section inherits serializable properties from H5FS_section_class_t */
H5_DLLVAR H5FS_section_class_t H5FS_SECT_CLS_FHEAP_SINGLE[1];
/* H5HF range section inherits serializable properties from H5FS_section_class_t */
H5_DLLVAR H5FS_section_class_t H5FS_SECT_CLS_FHEAP_RANGE[1];
/* H5HF indirect section inherits serializable properties from H5FS_section_class_t */
H5_DLLVAR H5FS_section_class_t H5FS_SECT_CLS_FHEAP_INDIRECT[1];
/* Declare a free list to manage the H5HF_hdr_t struct */
H5FL_EXTERN(H5HF_hdr_t);
/* Declare a free list to manage the H5HF_direct_t struct */
H5FL_EXTERN(H5HF_direct_t);
/* Declare a free list to manage heap direct block data to/from disk */
H5FL_BLK_EXTERN(direct_block);
/* Declare a free list to manage the H5HF_indirect_t struct */
H5FL_EXTERN(H5HF_indirect_t);
/* Declare a free list to manage the H5HF_indirect_ent_t sequence information */
H5FL_SEQ_EXTERN(H5HF_indirect_ent_t);
/* Declare a free list to manage the H5HF_free_section_t struct */
H5FL_EXTERN(H5HF_free_section_t);
/******************************/
/* Package Private Prototypes */
/******************************/
/* Routines for managing shared fractal heap header */
H5_DLL H5HF_hdr_t * H5HF_hdr_alloc(H5F_t *f);
H5_DLL herr_t H5HF_hdr_init(H5HF_hdr_t *hdr, haddr_t fh_addr, H5HF_create_t *cparam);
H5_DLL herr_t H5HF_hdr_finish_init(H5HF_hdr_t *hdr);
/* Doubling table routines */
H5_DLL herr_t H5HF_dtable_init(H5HF_dtable_t *dtable);
H5_DLL herr_t H5HF_dtable_dest(H5HF_dtable_t *dtable);
H5_DLL herr_t H5HF_dtable_lookup(const H5HF_dtable_t *dtable, hsize_t off,
unsigned *row, unsigned *col);
H5_DLL unsigned H5HF_dtable_size_to_row(H5HF_dtable_t *dtable, size_t block_size);
/* Heap header routines */
H5_DLL herr_t H5HF_hdr_incr(H5HF_hdr_t *hdr);
H5_DLL herr_t H5HF_hdr_decr(H5HF_hdr_t *hdr);
H5_DLL herr_t H5HF_hdr_dirty(H5HF_hdr_t *hdr);
H5_DLL herr_t H5HF_hdr_adj_free(H5HF_hdr_t *hdr, ssize_t amt);
H5_DLL herr_t H5HF_hdr_extend_heap(H5HF_hdr_t *hdr, hsize_t new_size, hsize_t extra_free);
H5_DLL herr_t H5HF_hdr_inc_alloc(H5HF_hdr_t *hdr, hsize_t new_alloc_size,
unsigned nentries);
/* Indirect block routines */
H5_DLL herr_t H5HF_iblock_incr(H5HF_indirect_t *iblock);
H5_DLL herr_t H5HF_iblock_decr(H5HF_indirect_t *iblock);
H5_DLL herr_t H5HF_iblock_dirty(H5HF_indirect_t *iblock);
H5_DLL H5HF_indirect_t * H5HF_man_iblock_place_dblock(H5HF_hdr_t *fh, hid_t dxpl_id,
size_t min_dblock_size, size_t *entry_p, size_t *dblock_size);
H5_DLL herr_t H5HF_man_iblock_alloc_single(H5HF_hdr_t *hdr, hid_t dxpl_id,
H5HF_free_section_t *sec_node);
H5_DLL herr_t H5HF_man_iblock_alloc_range(H5HF_hdr_t *hdr, hid_t dxpl_id,
H5HF_free_section_t **sec_node);
H5_DLL herr_t H5HF_man_iblock_alloc_indirect(H5HF_hdr_t *hdr, hid_t dxpl_id,
H5HF_free_section_t **sec_node);
H5_DLL H5HF_indirect_t *H5HF_man_iblock_protect(H5HF_hdr_t *hdr, hid_t dxpl_id,
haddr_t iblock_addr, unsigned iblock_nrows,
H5HF_indirect_t *par_iblock, unsigned par_entry,
H5AC_protect_t rw);
/* Direct block routines */
H5_DLL herr_t H5HF_man_dblock_new(H5HF_hdr_t *fh, hid_t dxpl_id, size_t request);
H5_DLL herr_t H5HF_man_dblock_create(hid_t dxpl_id, H5HF_hdr_t *hdr,
H5HF_indirect_t *par_iblock, unsigned par_entry, size_t block_size,
hsize_t block_off, haddr_t *addr_p, H5HF_free_section_t **ret_sec_node);
H5_DLL H5HF_direct_t *H5HF_man_dblock_protect(H5HF_hdr_t *hdr, hid_t dxpl_id,
haddr_t dblock_addr, size_t dblock_size,
H5HF_indirect_t *par_iblock, unsigned par_entry,
H5AC_protect_t rw);
/* Routines for internal operations */
H5_DLL herr_t H5HF_free_section_free_cb(void *item, void UNUSED *key,
void UNUSED *op_data);
H5_DLL herr_t H5HF_man_locate_block(H5HF_hdr_t *hdr, hid_t dxpl_id,
hsize_t obj_off, hbool_t locate_indirect, H5HF_indirect_t **par_iblock,
unsigned *par_entry, H5AC_protect_t rw);
H5_DLL herr_t H5HF_man_find(H5HF_hdr_t *fh, hid_t dxpl_id, size_t request,
H5HF_free_section_t **sec_node/*out*/);
H5_DLL herr_t H5HF_man_insert(H5HF_hdr_t *fh, hid_t dxpl_id,
H5HF_free_section_t *sec_node, size_t obj_size, const void *obj,
void *id);
H5_DLL herr_t H5HF_man_read(H5HF_hdr_t *fh, hid_t dxpl_id, hsize_t obj_off,
size_t obj_len, void *obj);
/* Metadata cache callbacks */
H5_DLL herr_t H5HF_cache_hdr_dest(H5F_t *f, H5HF_hdr_t *hdr);
H5_DLL herr_t H5HF_cache_dblock_dest(H5F_t *f, H5HF_direct_t *dblock);
H5_DLL herr_t H5HF_cache_iblock_dest(H5F_t *f, H5HF_indirect_t *iblock);
/* Debugging routines for dumping file structures */
H5_DLL herr_t H5HF_hdr_debug(H5F_t *f, hid_t dxpl_id, haddr_t addr,
FILE *stream, int indent, int fwidth);
H5_DLL herr_t H5HF_dblock_debug(H5F_t *f, hid_t dxpl_id, haddr_t addr,
FILE *stream, int indent, int fwidth, haddr_t hdr_addr, size_t nrec);
H5_DLL herr_t H5HF_iblock_debug(H5F_t *f, hid_t dxpl_id, haddr_t addr,
FILE *stream, int indent, int fwidth, haddr_t hdr_addr, unsigned nrows);
/* Statistics routines */
H5_DLL herr_t H5HF_stat_info(H5HF_t *fh, H5HF_stat_t *stats);
/* Block iteration routines */
H5_DLL herr_t H5HF_man_iter_init(H5HF_block_iter_t *biter);
H5_DLL herr_t H5HF_man_iter_start_offset(H5HF_hdr_t *hdr, hid_t dxpl_id,
H5HF_block_iter_t *biter, hsize_t offset);
H5_DLL herr_t H5HF_man_iter_start_entry(H5HF_hdr_t *hdr, H5HF_block_iter_t *biter,
H5HF_indirect_t *iblock, unsigned start_entry);
H5_DLL herr_t H5HF_man_iter_next(H5HF_hdr_t *hdr, H5HF_block_iter_t *biter,
unsigned nentries);
H5_DLL herr_t H5HF_man_iter_up(H5HF_block_iter_t *biter);
H5_DLL herr_t H5HF_man_iter_down(H5HF_block_iter_t *biter, H5HF_indirect_t *iblock);
H5_DLL herr_t H5HF_man_iter_reset(H5HF_block_iter_t *biter);
H5_DLL herr_t H5HF_man_iter_update_iblock(H5HF_block_iter_t *biter, H5HF_indirect_t *iblock);
H5_DLL herr_t H5HF_man_iter_curr(H5HF_block_iter_t *biter, unsigned *row, unsigned *col,
unsigned *entry, H5HF_indirect_t **block);
H5_DLL herr_t H5HF_man_iter_offset(H5HF_hdr_t *hdr, H5HF_block_iter_t *biter,
hsize_t *offset);
H5_DLL hbool_t H5HF_man_iter_ready(H5HF_block_iter_t *biter);
/* Free space manipulation routines */
H5_DLL herr_t H5HF_space_start(H5HF_hdr_t *hdr, hid_t dxpl_id);
H5_DLL htri_t H5HF_space_find(H5HF_hdr_t *hdr, hid_t dxpl_id, hsize_t request,
H5HF_free_section_t **node);
H5_DLL herr_t H5HF_space_add(H5HF_hdr_t *hdr, hid_t dxpl_id, H5HF_free_section_t *node);
H5_DLL herr_t H5HF_space_close(H5HF_hdr_t *hdr, hid_t dxpl_id);
/* Testing routines */
#ifdef H5HF_TESTING
H5_DLL herr_t H5HF_get_cparam_test(H5HF_t *fh, H5HF_create_t *cparam);
H5_DLL hsize_t H5HF_get_dblock_free_test(H5HF_t *fh, unsigned row);
H5_DLL size_t H5HF_get_dblock_overhead(H5HF_t *fh);
#endif /* H5HF_TESTING */
#endif /* _H5HFpkg_H */
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