1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
|
/****************************************************************************
* NCSA HDF *
* Scientific Data Technologies *
* National Center for Supercomputing Applications *
* University of Illinois at Urbana-Champaign *
* 605 E. Springfield, Champaign IL 61820 *
* *
* For conditions of distribution and use, see the accompanying *
* hdf/COPYING file. *
* *
****************************************************************************/
#include "H5Image.h"
/*-------------------------------------------------------------------------
* Function: H5IMmake_image
*
* Purpose:
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: May 01, 2001
*
* Comments:
* based on HDF5 Image and Palette Specification
* http://hdf.ncsa.uiuc.edu/HDF5/H5Image/ImageSpec.html
*
* The two required attributes that identify the data as an image are
* the name="CLASS" with the value of "IMAGE", and the name="VERSION"
* with the current value of "1.2"
*
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t H5IMmake_image( hid_t loc_id,
const char *dset_name,
const hsize_t *dims,
hid_t plist_id,
const void *buffer )
{
char *attr_name[] = {"CLASS","IMAGE_VERSION"};
char *attr_data[] = {"IMAGE","1.2"};
int rank;
herr_t status;
const H5IM_imageinfo_t *imageinfo;
if ( plist_id == H5IM_8BIT )
{
imageinfo = &H5IM_create_dflt8bit;
rank = 2;
}
else
{
/*to do */
}
/* First we make the dataset */
status = H5Lmake_dataset( loc_id, dset_name, rank, dims, H5T_NATIVE_UCHAR, H5T_NATIVE_UCHAR, buffer );
/* Then we attach the required attributes */
/* Attach the CLASS attribute */
status = H5Lattach_attribute( loc_id, dset_name, attr_name[0], attr_data[0] );
/* Attach the VERSION attribute */
status = H5Lattach_attribute( loc_id, dset_name, attr_name[1], attr_data[1] );
/* Attach the IMAGE_SUBCLASS attribute */
status = H5Lattach_attribute( loc_id, dset_name, "IMAGE_SUBCLASS", imageinfo->subclass );
/* Attach the INTERLACE_MODE attribute. This attribute is only for true color images*/
if ( rank == 3 )
status = H5Lattach_attribute( loc_id, dset_name, "INTERLACE_MODE", imageinfo->interlace );
/* We now attach the optional attributes */
/* Attach the IMAGE_COLORMODEL attribute */
status = H5Lattach_attribute( loc_id, dset_name, "IMAGE_COLORMODEL", imageinfo->color_model );
return status;
}
#if 0
herr_t H5Lmake_image( hid_t loc_id,
const char *dset_name,
const hsize_t *dims,
hid_t file_type_id,
hid_t mem_type_id,
const void *buffer,
H5L_imageinfo_t imageinfo )
{
char *attr_name[] = {"CLASS","IMAGE_VERSION"};
char *attr_data[] = {"IMAGE","1.2"};
char attr_color[20];
char attr_subclass[20];
char attr_interlace[20];
herr_t status;
int rank;
/* First we find the type of image. Version 1.2 only supports indexed and true color images.
* Indexed images are stored as 2D datasets, true color images are stored as 3D datasets,
* with the third dimension defining the number of color planes in the image.
*/
switch ( imageinfo.subclass )
{
case H5L_IMAGE_GRAYSCALE:
strcpy(attr_subclass,"IMAGE_GRAYSCALE");
return FAIL;
break;
case H5L_IMAGE_BITMAP:
strcpy(attr_subclass,"IMAGE_BITMAP");
return FAIL;
break;
case H5L_IMAGE_TRUECOLOR:
strcpy(attr_subclass,"IMAGE_TRUECOLOR");
rank = 3;
break;
case H5L_IMAGE_INDEXED:
strcpy(attr_subclass,"IMAGE_INDEXED");
rank = 2;
break;
default:
return FAIL;
};
/* Find the interlace mode */
switch ( imageinfo.interlace )
{
case H5L_INTERLACE_PIXEL:
strcpy(attr_interlace,"INTERLACE_PIXEL");
break;
case H5L_INTERLACE_PLANE:
strcpy(attr_interlace,"INTERLACE_PLANE");
break;
case H5L_INTERLACE_LINE:
strcpy(attr_interlace,"INTERLACE_LINE");
break;
};
/* Make the dataset */
status = H5Lmake_dataset( loc_id, dset_name, rank, dims, file_type_id, mem_type_id, buffer );
/* Then we attach the required attributes */
/* Attach the CLASS attribute */
status = H5Lattach_attribute( loc_id, dset_name, attr_name[0], attr_data[0] );
/* Attach the VERSION attribute */
status = H5Lattach_attribute( loc_id, dset_name, attr_name[1], attr_data[1] );
/* Attach the IMAGE_SUBCLASS attribute */
status = H5Lattach_attribute( loc_id, dset_name, "IMAGE_SUBCLASS", attr_subclass );
/* Attach the INTERLACE_MODE attribute. This attribute is only for true color images*/
if ( rank == 3 )
status = H5Lattach_attribute( loc_id, dset_name, "INTERLACE_MODE", attr_interlace );
/* We now attach the optional attributes */
/* Image color model atrribute */
switch ( imageinfo.color_model )
{
case H5L_MODEL_RGB:
strcpy(attr_color,"RGB");
break;
case H5L_MODEL_YUV:
strcpy(attr_color,"YUV");
break;
case H5L_MODEL_CMY:
strcpy(attr_color,"CMY");
break;
case H5L_MODEL_CMYK:
strcpy(attr_color,"CMYK");
case H5L_MODEL_YCBCR:
strcpy(attr_color,"YCbCr");
break;
case H5L_MODEL_HSV:
strcpy(attr_color,"HSV");
break;
default:
return FAIL;
};
/* Attach the IMAGE_COLORMODEL attribute */
status = H5Lattach_attribute( loc_id, dset_name, "IMAGE_COLORMODEL", attr_color );
return status;
}
/*-------------------------------------------------------------------------
* Function: H5Lmake_image_indexed
*
* Purpose:
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: May 01, 2001
*
* Comments:
*
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t H5Lmake_image_indexed( hid_t loc_id,
const char *dset_name,
const hsize_t *dims,
hid_t file_type_id,
hid_t mem_type_id,
const void *buffer )
{
H5L_imageinfo_t imageinfo;
herr_t status;
/* Initialize the image info for an indexed, RGB color model image */
imageinfo.subclass = H5L_IMAGE_INDEXED;
imageinfo.interlace = H5L_INTERLACE_PIXEL;
imageinfo.white_is_zero = -1;
imageinfo.minmax[0] = -1;
imageinfo.minmax[1] = -1;
imageinfo.bkindex = -1;
imageinfo.trindex = -1;
imageinfo.aspect_ratio = -1;
imageinfo.color_model = H5L_MODEL_RGB;
imageinfo.gamma_correction = -1;
/* Make the image dataset */
status = H5Lmake_image( loc_id, dset_name, dims, file_type_id, mem_type_id,
buffer, imageinfo );
return status;
}
/*-------------------------------------------------------------------------
* Function: H5Lmake_image_truecolor
*
* Purpose:
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: May 01, 2001
*
* Comments:
*
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t H5Lmake_image_truecolor( hid_t loc_id,
const char *dset_name,
const hsize_t *dims,
hid_t file_type_id,
hid_t mem_type_id,
const void *buffer )
{
H5L_imageinfo_t imageinfo;
herr_t status;
/* Initialize the image info for a true color, RGB color model image */
imageinfo.subclass = H5L_IMAGE_TRUECOLOR;
imageinfo.interlace = H5L_INTERLACE_PIXEL;
imageinfo.white_is_zero = -1;
imageinfo.minmax[0] = -1;
imageinfo.minmax[1] = -1;
imageinfo.bkindex = -1;
imageinfo.trindex = -1;
imageinfo.aspect_ratio = -1;
imageinfo.color_model = H5L_MODEL_RGB;
imageinfo.gamma_correction = -1;
/* Make the image dataset */
status = H5Lmake_image( loc_id, dset_name, dims, file_type_id, mem_type_id,
buffer, imageinfo );
return status;
}
/*-------------------------------------------------------------------------
* Function: find_palette
*
* Purpose: operator function used by H5L_find_palette
*
* Return:
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: May 28, 2001
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t find_palette( hid_t UNUSED loc_id, const char *name, void *op_data)
{
/* Define a default zero value for return. This will cause the iterator to continue if
* the palette attribute is not found yet.
*/
int ret = 0;
/* Define a positive value for return value if the attribute was found. This will
* cause the iterator to immediately return that positive value,
* indicating short-circuit success
*/
if( HDstrcmp( name, "PALETTE" ) == 0 )
ret = 1;
return ret;
}
/*-------------------------------------------------------------------------
* Function: H5L_find_palette
*
* Purpose: Find the atrribute "PALETTE" in the image dataset
*
* Return: Success: 1, Failure: 0
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: May 11, 2001
*
* Comments:
* The function uses H5Aiterate with the operator function find_palette
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t H5L_find_palette( hid_t loc_id )
{
unsigned int attr_num; /* Starting attribute to look up */
herr_t ret;
attr_num = 0;
ret = H5Aiterate( loc_id, &attr_num, find_palette, 0 );
return ret;
}
/*-------------------------------------------------------------------------
* Function: H5Lattach_palette
*
* Purpose: This function attaches a palette to an existing image dataset
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: May 01, 2001
*
* Comments:
* based on HDF5 Image and Palette Specification
* http://hdf.ncsa.uiuc.edu/HDF5/H5Image/ImageSpec.html
*
* An image (dataset) within an HDF5 file may optionally specify an array of
* palettes to be viewed with. The dataset will have an attribute
* which contains an array of object reference pointers which refer to palettes in the file.
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t H5Lattach_palette( hid_t loc_id,
const char *image_name,
const char *pal_name,
const hsize_t *pal_dims,
hid_t file_type_id,
hid_t mem_type_id,
const void *pal_data,
H5L_colormodel_t color_model,
H5L_palette_t palette_t,
const char *rangeindex,
const void *minmax )
{
char *attr_name[] = {"CLASS","PAL_COLORMODEL","PAL_TYPE","RANGE_INDEX",
"PAL_MINMAXNUMERIC","PAL_VERSION"};
hid_t image_id;
hid_t attr_type;
hid_t attr_id;
hid_t attr_space_id;
herr_t status;
hid_t attr_class;
hobj_ref_t ref; /* write a new reference */
hobj_ref_t *refbuf; /* buffer to read references */
hssize_t n_refs;
hsize_t dim_ref;
char attr_color[5];
char attr_paltype[11];
int ok_pal;
switch ( color_model )
{
case H5L_MODEL_RGB:
strcpy(attr_color,"RGB");
break;
case H5L_MODEL_YUV:
strcpy(attr_color,"YUV");
break;
case H5L_MODEL_CMY:
strcpy(attr_color,"CMY");
break;
case H5L_MODEL_CMYK:
strcpy(attr_color,"CMYK");
break;
case H5L_MODEL_YCBCR:
strcpy(attr_color,"YCbCr");
break;
case H5L_MODEL_HSV:
strcpy(attr_color,"HSV");
break;
default:
return FAIL;
};
switch ( palette_t )
{
case H5L_PAL_STANDARD:
strcpy(attr_paltype,"STANDARD8");
break;
case H5L_PAL_RANGEINDEX:
strcpy(attr_paltype,"RANGEINDEX");
break;
default:
return FAIL;
};
/* First we create the palette dataset and attach to it the required attributes
* that identify it as a palette
*/
/* Make the palette dataset. The palette is created on the same local id. */
status = H5Lmake_dataset( loc_id, pal_name, 2, pal_dims, file_type_id, mem_type_id, pal_data );
/* Attach the attribute "CLASS" to the >>palette<< dataset*/
status = H5Lattach_attribute( loc_id, pal_name, attr_name[0], "PALETTE" );
/* Attach the attribute "PAL_COLORMODEL" to the >>palette<< dataset*/
status = H5Lattach_attribute( loc_id, pal_name, attr_name[1], attr_color );
/* Attach the attribute "PAL_TYPE" to the >>palette<< dataset*/
status = H5Lattach_attribute( loc_id, pal_name, attr_name[2], attr_paltype );
/* Attach the attribute "PAL_VERSION" to the >>palette<< dataset*/
status = H5Lattach_attribute( loc_id, pal_name, attr_name[5], "1.2" );
/* The image dataset may or not have the attribute "PALETTE"
* First we try to open to see if it is already there; if not, it is created.
* If it exists, the array of references is extended to hold the reference
* to the new palette
*/
/* First we get the image id */
image_id = H5Dopen( loc_id, image_name );
/* Try to find the attribute "PALETTE" on the >>image<< dataset */
ok_pal = H5L_find_palette( image_id );
/* It does not exist. We create the attribute and one reference */
if ( ok_pal <= 0 )
{
attr_space_id = H5Screate( H5S_SCALAR );
/* Create the attribute type for the reference */
attr_type = H5Tcopy( H5T_STD_REF_OBJ );
/* Create the attribute "PALETTE" to be attached to the image*/
attr_id = H5Acreate( image_id, "PALETTE", attr_type, attr_space_id, H5P_DEFAULT );
/* Create a reference. The reference is created on the local id. */
status = H5Rcreate( &ref, loc_id, pal_name, H5R_OBJECT, -1 );
/* Write the attribute with the reference */
status = H5Awrite( attr_id, attr_type, &ref );
status = H5Sclose( attr_space_id );
}
/* The attribute already exists, open it */
else if ( ok_pal == 1 )
{
attr_id = H5Aopen_name( image_id, "PALETTE" );
attr_type = H5Aget_type( attr_id );
attr_class = H5Tget_class( attr_type );
/* Check if it is really a reference */
if ( attr_class == H5T_REFERENCE )
{
/* Get and save the old reference(s) */
attr_space_id = H5Aget_space( attr_id );
n_refs = H5Sget_simple_extent_npoints( attr_space_id );
dim_ref = n_refs + 1;
refbuf = malloc( sizeof(hobj_ref_t) * (int)dim_ref );
status = H5Aread( attr_id, attr_type, refbuf );
status = H5Sclose( attr_space_id );
/* The attribute must be deleted, in order to the new one can reflect the changes*/
status = H5Adelete( image_id, "PALETTE" );
/* Create a new reference for this palette. */
status = H5Rcreate( &ref, loc_id, pal_name, H5R_OBJECT, -1 );
refbuf[n_refs] = ref;
/* Create the data space for the new references */
attr_space_id = H5Screate_simple( 1, &dim_ref, NULL );
/* Create the attribute again with the changes of space */
attr_id = H5Acreate( image_id, "PALETTE", attr_type, attr_space_id, H5P_DEFAULT );
/* Write the attribute with the new references */
status = H5Awrite( attr_id, attr_type, refbuf );
status = H5Sclose( attr_space_id );
free( refbuf );
} /* H5T_REFERENCE */
status = H5Tclose( attr_type );
/* Close the attribute. */
status = H5Aclose( attr_id );
}
/* Close the image dataset. */
status = H5Dclose( image_id );
return status;
}
#endif
|