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|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*-------------------------------------------------------------------------
*
* Created: H5O.c
* Aug 5 1997
* Robb Matzke <matzke@llnl.gov>
*
* Purpose: Object header virtual functions.
*
*-------------------------------------------------------------------------
*/
#define H5F_PACKAGE /*suppress error about including H5Fpkg */
#define H5O_PACKAGE /*suppress error about including H5Opkg */
#include "H5private.h" /* Generic Functions */
#include "H5Dprivate.h" /* Datasets */
#include "H5Eprivate.h" /* Error handling */
#include "H5Fpkg.h" /* File access */
#include "H5FLprivate.h" /* Free lists */
#include "H5HGprivate.h" /* Global Heaps */
#include "H5Iprivate.h" /* IDs */
#include "H5Lprivate.h" /* Links */
#include "H5MFprivate.h" /* File memory management */
#include "H5MMprivate.h" /* Memory management */
#include "H5Opkg.h" /* Object headers */
#ifdef H5_HAVE_GETTIMEOFDAY
#include <sys/time.h>
#endif /* H5_HAVE_GETTIMEOFDAY */
/* Local macros */
/* Load native information for a message, if it's not already present */
/* (Only works for messages with decode callback) */
#define LOAD_NATIVE(F, DXPL, MSG, ERR) \
if(NULL == (MSG)->native) { \
const H5O_msg_class_t *decode_type; \
\
/* Check for shared message */ \
if ((MSG)->flags & H5O_FLAG_SHARED) \
decode_type = H5O_MSG_SHARED; \
else \
decode_type = (MSG)->type; \
\
/* Decode the message */ \
HDassert(decode_type->decode); \
if(NULL == ((MSG)->native = (decode_type->decode)((F), (DXPL), (MSG)->raw))) \
HGOTO_ERROR(H5E_OHDR, H5E_CANTDECODE, ERR, "unable to decode message") \
} /* end if */
/* Private typedefs */
/* User data for iteration while removing a message */
typedef struct {
H5F_t *f; /* Pointer to file for insertion */
hid_t dxpl_id; /* DXPL during iteration */
int sequence; /* Sequence # to search for */
unsigned nfailed; /* # of failed message removals */
H5O_operator_t op; /* Callback routine for removal operations */
void *op_data; /* Callback data for removal operations */
hbool_t adj_link; /* Whether to adjust links when removing messages */
} H5O_iter_ud1_t;
/* Typedef for "internal library" iteration operations */
typedef herr_t (*H5O_lib_operator_t)(H5O_mesg_t *mesg/*in,out*/, unsigned idx,
unsigned * oh_flags_ptr, void *operator_data/*in,out*/);
/* Some syntactic sugar to make the compiler happy with two different kinds of iterator callbacks */
typedef union {
H5O_operator_t app_op; /* Application callback for each message */
H5O_lib_operator_t lib_op; /* Library internal callback for each message */
} H5O_mesg_operator_t;
/*
* This table contains a list of object types, descriptions, and the
* functions that determine if some object is a particular type. The table
* is allocated dynamically.
*/
typedef struct H5O_typeinfo_t {
H5G_obj_t type; /*one of the public H5G_* types */
htri_t (*isa)(H5O_t*); /*function to determine type */
char *desc; /*description of object type */
} H5O_typeinfo_t;
/* Node in skip list to map addresses from one file to another during object header copy */
typedef struct H5O_addr_map_t {
haddr_t src_addr; /* Address of object in source file */
haddr_t dst_addr; /* Address of object in destination file */
hbool_t is_locked; /* Indicate that the destination object is locked currently */
hsize_t inc_ref_count; /* Number of deferred increments to reference count */
} H5O_addr_map_t;
/* Package variables */
/* Header message ID to class mapping */
const H5O_msg_class_t *const H5O_msg_class_g[] = {
H5O_MSG_NULL, /*0x0000 Null */
H5O_MSG_SDSPACE, /*0x0001 Simple Dimensionality */
#ifdef H5_GROUP_REVISION
H5O_MSG_LINFO, /*0x0002 Link information */
#else /* H5_GROUP_REVISION */
NULL,
#endif /* H5_GROUP_REVISION */
H5O_MSG_DTYPE, /*0x0003 Data Type */
H5O_MSG_FILL, /*0x0004 Old data storage -- fill value */
H5O_MSG_FILL_NEW, /*0x0005 New Data storage -- fill value */
#ifdef H5_GROUP_REVISION
H5O_MSG_LINK, /*0x0006 Link */
#else /* H5_GROUP_REVISION */
NULL,
#endif /* H5_GROUP_REVISION */
H5O_MSG_EFL, /*0x0007 Data storage -- external data files */
H5O_MSG_LAYOUT, /*0x0008 Data Layout */
#ifdef H5O_ENABLE_BOGUS
H5O_MSG_BOGUS, /*0x0009 "Bogus" */
#else /* H5O_ENABLE_BOGUS */
NULL, /*0x0009 "Bogus" */
#endif /* H5O_ENABLE_BOGUS */
#ifdef H5_GROUP_REVISION
H5O_MSG_GINFO, /*0x000A Group Information */
#else /* H5_GROUP_REVISION */
NULL,
#endif /* H5_GROUP_REVISION */
H5O_MSG_PLINE, /*0x000B Data storage -- filter pipeline */
H5O_MSG_ATTR, /*0x000C Attribute list */
H5O_MSG_NAME, /*0x000D Object name */
H5O_MSG_MTIME, /*0x000E Object modification date and time */
H5O_MSG_SHARED, /*0x000F Shared header message */
H5O_MSG_CONT, /*0x0010 Object header continuation */
H5O_MSG_STAB, /*0x0011 Symbol table */
H5O_MSG_MTIME_NEW, /*0x0012 New Object modification date and time */
};
/* Header object ID to class mapping */
/*
* Initialize the object class info table. Begin with the most general types
* and end with the most specific. For instance, any object that has a
* datatype message is a datatype but only some of them are datasets.
*/
const H5O_obj_class_t *const H5O_obj_class_g[] = {
H5O_OBJ_DATATYPE, /* Datatype object (H5G_TYPE - 2) */
H5O_OBJ_DATASET, /* Dataset object (H5G_DATASET - 1) */
H5O_OBJ_GROUP, /* Group object (H5G_GROUP - 0) */
};
/* Declare a free list to manage the H5O_t struct */
H5FL_DEFINE(H5O_t);
/* Declare a free list to manage the H5O_mesg_t sequence information */
H5FL_SEQ_DEFINE(H5O_mesg_t);
/* Declare a free list to manage the H5O_chunk_t sequence information */
H5FL_SEQ_DEFINE(H5O_chunk_t);
/* Declare a free list to manage the chunk image information */
H5FL_BLK_DEFINE(chunk_image);
/* Library private variables */
/* Local variables */
/* Declare external the free list for time_t's */
H5FL_EXTERN(time_t);
/* Declare extern the free list for H5O_cont_t's */
H5FL_EXTERN(H5O_cont_t);
/* Declare a free list to manage the H5O_addr_map_t struct */
H5FL_DEFINE_STATIC(H5O_addr_map_t);
/* PRIVATE PROTOTYPES */
static hid_t H5O_open_by_loc(H5G_loc_t *obj_loc, hid_t dxpl_id);
static H5O_loc_t * H5O_get_oloc(hid_t id);
static herr_t H5O_new(H5F_t *f, hid_t dxpl_id, size_t size_hint,
H5O_loc_t *loc/*out*/, haddr_t header);
static herr_t H5O_reset_real(const H5O_msg_class_t *type, void *native);
static void * H5O_copy_real(const H5O_msg_class_t *type, const void *mesg,
void *dst);
static int H5O_count_real(H5O_loc_t *loc, const H5O_msg_class_t *type,
hid_t dxpl_id);
#ifdef NOT_YET
static herr_t H5O_share(H5F_t *f, hid_t dxpl_id, const H5O_msg_class_t *type, const void *mesg,
H5HG_t *hobj/*out*/);
#endif /* NOT_YET */
static unsigned H5O_find_in_ohdr(H5F_t *f, hid_t dxpl_id, H5O_t *oh,
const H5O_msg_class_t **type_p, int sequence);
static int H5O_modify_real(H5O_loc_t *loc, const H5O_msg_class_t *type,
int overwrite, unsigned flags, unsigned update_flags, const void *mesg,
hid_t dxpl_id);
static int H5O_append_real(H5F_t *f, hid_t dxpl_id, H5O_t *oh,
const H5O_msg_class_t *type, unsigned flags, const void *mesg,
unsigned * oh_flags_ptr);
static herr_t H5O_remove_real(const H5O_loc_t *loc, const H5O_msg_class_t *type,
int sequence, H5O_operator_t op, void *op_data, hbool_t adj_link, hid_t dxpl_id);
static unsigned H5O_alloc(H5F_t *f, hid_t dxpl_id, H5O_t *oh,
const H5O_msg_class_t *type, size_t size, hbool_t * oh_dirtied_ptr);
static herr_t H5O_alloc_msgs(H5O_t *oh, size_t min_alloc);
static htri_t H5O_move_msgs_forward(H5F_t *f, H5O_t *oh, hid_t dxpl_id);
static htri_t H5O_merge_null(H5F_t *f, H5O_t *oh);
static htri_t H5O_remove_empty_chunks(H5F_t *f, H5O_t *oh, hid_t dxpl_id);
static herr_t H5O_condense_header(H5F_t *f, H5O_t *oh, hid_t dxpl_id);
static htri_t H5O_alloc_extend_chunk(H5F_t *f, H5O_t *oh,
unsigned chunkno, size_t size, unsigned * msg_idx);
static unsigned H5O_alloc_new_chunk(H5F_t *f, hid_t dxpl_id, H5O_t *oh,
size_t size);
static herr_t H5O_delete_oh(H5F_t *f, hid_t dxpl_id, H5O_t *oh);
static herr_t H5O_delete_mesg(H5F_t *f, hid_t dxpl_id, H5O_mesg_t *mesg,
hbool_t adj_link);
static unsigned H5O_new_mesg(H5F_t *f, H5O_t *oh, unsigned *flags,
const H5O_msg_class_t *orig_type, const void *orig_mesg, H5O_shared_t *sh_mesg,
const H5O_msg_class_t **new_type, const void **new_mesg, hid_t dxpl_id,
unsigned * oh_flags_ptr);
static herr_t H5O_write_mesg(H5O_t *oh, unsigned idx, const H5O_msg_class_t *type,
const void *mesg, unsigned flags, unsigned update_flags,
unsigned * oh_flags_ptr);
static herr_t H5O_iterate_real(const H5O_loc_t *loc, const H5O_msg_class_t *type,
H5AC_protect_t prot, hbool_t internal, H5O_mesg_operator_t op, void *op_data, hid_t dxpl_id);
static H5G_obj_t H5O_obj_type_real(H5O_t *oh);
static const H5O_obj_class_t *H5O_obj_class(H5O_t *oh);
static void * H5O_copy_mesg_file(const H5O_msg_class_t *type, H5F_t *file_src, void *mesg_src,
H5F_t *file_dst, hid_t dxpl_id, H5O_copy_t *cpy_info, void *udata);
static herr_t H5O_copy_header_real(const H5O_loc_t *oloc_src, H5O_loc_t *oloc_dst /*out */,
hid_t dxpl_id, H5O_copy_t *cpy_info);
static herr_t H5O_copy_free_addrmap_cb(void *item, void *key, void *op_data);
static herr_t H5O_copy_obj_by_ref(H5O_loc_t *src_oloc, hid_t dxpl_id,
H5O_loc_t *dst_oloc, H5G_loc_t *dst_root_loc, H5O_copy_t *cpy_info);
/*-------------------------------------------------------------------------
* Function: H5Oopen
*
* Purpose: Opens an object within an HDF5 file.
*
* This function opens an object in the same way that H5Gopen,
* H5Topen, and H5Dopen do. However, H5Oopen doesn't require
* the type of object to be known beforehand. This can be
* useful in user-defined links, for instance, when only a
* path is known.
*
* The opened object should be closed again with H5Oclose
* or H5Gclose, H5Tclose, or H5Dclose.
* Return: Success: An open object identifier
* Failure: Negative
*
* Programmer: James Laird
* July 14 2006
*
*-------------------------------------------------------------------------
*/
hid_t
H5Oopen(hid_t loc_id, const char *name, hid_t lapl_id)
{
H5G_loc_t loc;
H5G_loc_t obj_loc; /* Location used to open group */
H5G_name_t obj_path; /* Opened object group hier. path */
H5O_loc_t obj_oloc; /* Opened object object location */
hbool_t loc_found = FALSE; /* Entry at 'name' found */
hid_t ret_value = FAIL;
FUNC_ENTER_API(H5Oopen, FAIL)
H5TRACE3("i","isi",loc_id,name,lapl_id);
/* Check args */
if(H5G_loc(loc_id, &loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
if(!name || !*name)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no name")
/* Set up opened group location to fill in */
obj_loc.oloc = &obj_oloc;
obj_loc.path = &obj_path;
H5G_loc_reset(&obj_loc);
/* Find the object's location */
if(H5G_loc_find(&loc, name, &obj_loc/*out*/, lapl_id, H5AC_dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "group not found")
loc_found = TRUE;
if((ret_value = H5O_open_by_loc(&obj_loc, H5AC_dxpl_id)) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTOPENOBJ, FAIL, "unable to open object")
done:
if(ret_value < 0) {
if(loc_found) {
if(H5G_loc_free(&obj_loc) < 0)
HDONE_ERROR(H5E_SYM, H5E_CANTRELEASE, FAIL, "can't free location")
}
} /* end if */
FUNC_LEAVE_API(ret_value)
} /* end H5Oopen() */
/*-------------------------------------------------------------------------
* Function: H5Oopen_by_addr
*
* Purpose: Warning! This function is EXTREMELY DANGEROUS!
* Improper use can lead to FILE CORRUPTION, INACCESSIBLE DATA,
* and other VERY BAD THINGS!
*
* This function opens an object using its address within the
* HDF5 file, similar to an HDF5 hard link. The open object
* is identical to an object opened with H5Oopen() and should
* be closed with H5Oclose() or a type-specific closing
* function (such as H5Gclose() ).
*
* This function is very dangerous if called on an invalid
* address. For this reason, H5Oincr_refcount() should be
* used to prevent HDF5 from deleting any object that is
* referenced by address (e.g. by a user-defined link).
* H5Odecr_refcount() should be used when the object is
* no longer being referenced by address (e.g. when the UD link
* is deleted).
*
* The address of the HDF5 file on disk has no effect on
* H5Oopen_by_addr(), nor does the use of any unusual file
* drivers. The "address" is really the offset within the
* HDF5 file, and HDF5's file drivers will transparently
* map this to an address on disk for the filesystem.
*
* Return: Success: An open object identifier
* Failure: Negative
*
* Programmer: James Laird
* July 14 2006
*
*-------------------------------------------------------------------------
*/
hid_t
H5Oopen_by_addr(hid_t loc_id, haddr_t addr)
{
H5G_loc_t loc;
H5G_loc_t obj_loc; /* Location used to open group */
H5G_name_t obj_path; /* Opened object group hier. path */
H5O_loc_t obj_oloc; /* Opened object object location */
hbool_t loc_found = FALSE; /* Location at 'name' found */
hid_t ret_value = FAIL;
FUNC_ENTER_API(H5Oopen_by_addr, FAIL)
H5TRACE2("i","ia",loc_id,addr);
/* Check args */
if(H5G_loc(loc_id, &loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
if(addr == 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no address supplied")
/* Set up opened group location to fill in */
obj_loc.oloc = &obj_oloc;
obj_loc.path = &obj_path;
H5G_loc_reset(&obj_loc);
obj_loc.oloc->addr = addr;
obj_loc.oloc->file = loc.oloc->file;
H5G_name_reset(obj_loc.path);
if((ret_value = H5O_open_by_loc(&obj_loc, H5AC_dxpl_id)) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTOPENOBJ, FAIL, "unable to open object")
done:
if(ret_value < 0) {
if(loc_found) {
if(H5G_loc_free(&obj_loc) < 0)
HDONE_ERROR(H5E_SYM, H5E_CANTRELEASE, FAIL, "can't free location")
}
} /* end if */
FUNC_LEAVE_API(ret_value)
} /* end H5Oopen_by_addr() */
/*-------------------------------------------------------------------------
* Function: H5Oclose
*
* Purpose: Close an open file object.
*
* This is the companion to H5Oopen. It is used to close any
* open object in an HDF5 file (but not IDs are that not file
* objects, such as property lists and dataspaces). It has
* the same effect as calling H5Gclose, H5Dclose, or H5Tclose.
*
* Return: Success: Non-negative
* Failure: Negative
*
* Programmer: James Laird
* July 14 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5Oclose(hid_t object_id)
{
herr_t ret_value = SUCCEED;
FUNC_ENTER_API(H5Oclose, FAIL)
H5TRACE1("e","i",object_id);
/* Get the type of the object and open it in the correct way */
switch(H5I_get_type(object_id))
{
case(H5I_GROUP):
case(H5I_DATATYPE):
case(H5I_DATASET):
if(H5I_object(object_id) == NULL)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a valid object")
if(H5I_dec_ref(object_id) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTRELEASE, FAIL, "unable to close object")
break;
default:
HGOTO_ERROR(H5E_ARGS, H5E_CANTRELEASE, FAIL, "not a valid file object ID (dataset, group, or datatype)")
break;
} /* end switch */
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Oclose() */
/*-------------------------------------------------------------------------
* Function: H5Oincr_refcount
*
* Purpose: Warning! This function is EXTREMELY DANGEROUS!
* Improper use can lead to FILE CORRUPTION, INACCESSIBLE DATA,
* and other VERY BAD THINGS!
*
* This function increments the "hard link" reference count
* for an object. It should be used when a user-defined link
* that references an object by address is created. When the
* link is deleted, H5Odecr_refcount should be used.
*
* Return: Success: Non-negative
* Failure: Negative
*
* Programmer: James Laird
* July 14 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5Oincr_refcount(hid_t object_id)
{
H5O_loc_t *oloc;
herr_t ret_value = SUCCEED;
FUNC_ENTER_API(H5Oincr_refcount, FAIL)
H5TRACE1("Is","i",object_id);
/* Get the object's oloc so we can adjust its link count */
if((oloc = H5O_get_oloc(object_id)) == NULL)
HGOTO_ERROR(H5E_ATOM, H5E_BADVALUE, FAIL, "unable to get object location from ID")
if(H5O_link(oloc, 1, H5AC_dxpl_id) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_LINKCOUNT, FAIL, "modifying object link count failed")
done:
FUNC_LEAVE_API(ret_value)
} /* end H5O_incr_refcount() */
/*-------------------------------------------------------------------------
* Function: H5Odecr_refcount
*
* Purpose: Warning! This function is EXTREMELY DANGEROUS!
* Improper use can lead to FILE CORRUPTION, INACCESSIBLE DATA,
* and other VERY BAD THINGS!
*
* This function decrements the "hard link" reference count
* for an object. It should be used when user-defined links
* that reference an object by address are deleted, and only
* after H5Oincr_refcount has already been used.
*
* Return: Success: The object's new refcount
* Failure: Negative
*
* Programmer: James Laird
* July 14 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5Odecr_refcount(hid_t object_id)
{
H5O_loc_t *oloc;
herr_t ret_value = SUCCEED;
FUNC_ENTER_API(H5Odecr_refcount, FAIL)
H5TRACE1("Is","i",object_id);
/* Get the object's oloc so we can adjust its link count */
if((oloc = H5O_get_oloc(object_id)) == NULL)
HGOTO_ERROR(H5E_ATOM, H5E_BADVALUE, FAIL, "unable to get object location from ID")
if(H5O_link(oloc, -1, H5AC_dxpl_id) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_LINKCOUNT, FAIL, "modifying object link count failed")
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Odecr_refcount() */
/*-------------------------------------------------------------------------
* Function: H5O_open_by_loc
*
* Purpose: Opens an object and returns an ID given its group loction.
*
* This functions simply invokes H5G_open, H5T_open, or
* H5D_open depending on the object type.
*
* Return: Success: Open object identifier
* Failure: Negative
*
* Programmer: James Laird
* July 25 2006
*
*-------------------------------------------------------------------------
*/
static hid_t
H5O_open_by_loc(H5G_loc_t *obj_loc, hid_t dxpl_id)
{
H5G_t *grp = NULL;
H5D_t *dset = NULL;
H5T_t *type = NULL;
hid_t ret_value;
FUNC_ENTER_NOAPI(H5O_open_by_loc, FAIL)
HDassert(obj_loc);
/* Get the type of the object and open it in the correct way */
switch(H5O_obj_type(obj_loc->oloc, dxpl_id))
{
case(H5G_GROUP):
/* Open the group */
if((grp = H5G_open(obj_loc, dxpl_id)) == NULL)
HGOTO_ERROR(H5E_SYM, H5E_CANTOPENOBJ, FAIL, "unable to open group")
/* Register an atom for the group */
if((ret_value = H5I_register(H5I_GROUP, grp)) < 0)
HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, FAIL, "unable to register group")
break;
case(H5G_DATASET):
/* Open the group */
if((dset = H5D_open(obj_loc, dxpl_id)) == NULL)
HGOTO_ERROR(H5E_SYM, H5E_CANTOPENOBJ, FAIL, "unable to open dataset")
/* Register an atom for the group */
if((ret_value = H5I_register(H5I_DATASET, dset)) < 0)
HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, FAIL, "unable to register dataset")
break;
case(H5G_TYPE):
/* Open the group */
if((type = H5T_open(obj_loc, dxpl_id)) == NULL)
HGOTO_ERROR(H5E_SYM, H5E_CANTOPENOBJ, FAIL, "unable to open datatype")
/* Register an atom for the group */
if((ret_value = H5I_register(H5I_DATATYPE, type)) < 0)
HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, FAIL, "unable to register datatype")
break;
default:
HGOTO_ERROR(H5E_SYM, H5E_BADTYPE, FAIL, "invalid object type")
}
done:
if(ret_value < 0) {
if(grp != NULL)
H5G_close(grp);
else if(dset != NULL)
H5D_close(dset);
else if(type != NULL)
H5T_close(type);
} /* end if */
FUNC_LEAVE_NOAPI(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5O_get_oloc
*
* Purpose: Gets the oloc for an object given its ID.
*
* Return: Success: Pointer to H5O_loc_t
* Failure: NULL
*
* Programmer: James Laird
* July 25 2006
*
*-------------------------------------------------------------------------
*/
static H5O_loc_t *
H5O_get_oloc(hid_t object_id)
{
H5G_t *grp = NULL;
H5D_t *dset = NULL;
H5T_t *type = NULL;
H5O_loc_t *ret_value;
FUNC_ENTER_NOAPI(H5O_get_oloc, NULL)
switch(H5I_get_type(object_id))
{
case(H5I_GROUP):
if((grp = H5I_object(object_id)) == NULL)
HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, NULL, "couldn't get group from ID")
if((ret_value = H5G_oloc(grp)) == NULL)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, NULL, "unable to get object location from group ID")
break;
case(H5I_DATASET):
if((dset = H5I_object(object_id)) == NULL)
HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, NULL, "couldn't get dataset from ID")
if((ret_value = H5D_oloc(dset)) == NULL)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, NULL, "unable to get object location from dataset ID")
break;
case(H5I_DATATYPE):
if((type = H5I_object(object_id)) == NULL)
HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, NULL, "couldn't get type from ID")
if((ret_value = H5T_oloc(type)) == NULL)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, NULL, "unable to get object location from datatype ID")
break;
default:
HGOTO_ERROR(H5E_SYM, H5E_BADTYPE, NULL, "invalid object type")
}
done:
FUNC_LEAVE_NOAPI(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5O_create
*
* Purpose: Creates a new object header. Allocates space for it and
* then calls an initialization function. The object header
* is opened for write access and should eventually be
* closed by calling H5O_close().
*
* Return: Success: Non-negative, the ENT argument contains
* information about the object header,
* including its address.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 5 1997
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_create(H5F_t *f, hid_t dxpl_id, size_t size_hint, H5O_loc_t *loc/*out*/)
{
haddr_t header;
herr_t ret_value = SUCCEED; /* return value */
FUNC_ENTER_NOAPI(H5O_create, FAIL)
/* check args */
HDassert(f);
HDassert(loc);
size_hint = H5O_ALIGN(MAX(H5O_MIN_SIZE, size_hint));
/* allocate disk space for header and first chunk */
if(HADDR_UNDEF == (header = H5MF_alloc(f, H5FD_MEM_OHDR, dxpl_id,
(hsize_t)H5O_SIZEOF_HDR(f) + size_hint)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "file allocation failed for object header header")
/* initialize the object header */
if(H5O_new(f, dxpl_id, size_hint, loc, header) != SUCCEED)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to initialize object header")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_create() */
/*-------------------------------------------------------------------------
* Function: H5O_new
*
* Purpose: Initialize a new object header, sets the link count to 0,
* and caches the header. The object header is opened for
* write access and should eventually be closed by calling
* H5O_close().
*
* Return: Success: SUCCEED, the ENT argument contains
* information about the object header,
* including its address.
* Failure: FAIL
*
* Programmer: Bill Wendling
* 1, November 2002
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O_new(H5F_t *f, hid_t dxpl_id, size_t size_hint, H5O_loc_t *loc/*out*/, haddr_t header)
{
H5O_t *oh = NULL;
haddr_t tmp_addr;
herr_t ret_value = SUCCEED; /* return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_new)
/* check args */
HDassert(f);
HDassert(loc);
size_hint = H5O_ALIGN(MAX(H5O_MIN_SIZE, size_hint));
loc->file = f;
loc->addr = header;
/* allocate the object header and fill in header fields */
if(NULL == (oh = H5FL_MALLOC(H5O_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
oh->version = H5O_VERSION;
oh->nlink = 0;
/* create the chunk list and initialize the first chunk */
oh->nchunks = 1;
oh->alloc_nchunks = H5O_NCHUNKS;
if(NULL == (oh->chunk = H5FL_SEQ_MALLOC(H5O_chunk_t, (size_t)oh->alloc_nchunks)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
tmp_addr = loc->addr + (hsize_t)H5O_SIZEOF_HDR(f);
oh->chunk[0].dirty = TRUE;
oh->chunk[0].addr = tmp_addr;
oh->chunk[0].size = size_hint;
if(NULL == (oh->chunk[0].image = H5FL_BLK_CALLOC(chunk_image, size_hint)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
/* create the message list and initialize the first message */
oh->nmesgs = 1;
oh->alloc_nmesgs = H5O_NMESGS;
if(NULL == (oh->mesg = H5FL_SEQ_CALLOC(H5O_mesg_t, (size_t)oh->alloc_nmesgs)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
oh->mesg[0].type = H5O_MSG_NULL;
oh->mesg[0].dirty = TRUE;
oh->mesg[0].native = NULL;
oh->mesg[0].raw = oh->chunk[0].image + H5O_SIZEOF_MSGHDR(f);
oh->mesg[0].raw_size = size_hint - H5O_SIZEOF_MSGHDR(f);
oh->mesg[0].chunkno = 0;
/* cache it */
if(H5AC_set(f, dxpl_id, H5AC_OHDR, loc->addr, oh, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to cache object header")
/* open it */
if(H5O_open(loc) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTOPENOBJ, FAIL, "unable to open object header")
done:
if(ret_value < 0 && oh) {
if(H5O_dest(f, oh) < 0)
HDONE_ERROR(H5E_OHDR, H5E_CANTFREE, FAIL, "unable to destroy object header data")
} /* end if */
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_new() */
/*-------------------------------------------------------------------------
* Function: H5O_open
*
* Purpose: Opens an object header which is described by the symbol table
* entry OBJ_ENT.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Monday, January 5, 1998
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_open(const H5O_loc_t *loc)
{
FUNC_ENTER_NOAPI_NOFUNC(H5O_open)
/* Check args */
HDassert(loc);
HDassert(loc->file);
#ifdef H5O_DEBUG
if (H5DEBUG(O))
HDfprintf(H5DEBUG(O), "> %a\n", loc->addr);
#endif
/* Increment open-lock counters */
loc->file->nopen_objs++;
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5O_open() */
/*-------------------------------------------------------------------------
* Function: H5O_close
*
* Purpose: Closes an object header that was previously open.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Monday, January 5, 1998
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_close(H5O_loc_t *loc)
{
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5O_close, FAIL)
/* Check args */
HDassert(loc);
HDassert(loc->file);
HDassert(loc->file->nopen_objs > 0);
/* Decrement open-lock counters */
--loc->file->nopen_objs;
#ifdef H5O_DEBUG
if (H5DEBUG(O)) {
if(loc->file->file_id < 0 && 1 == loc->file->shared->nrefs) {
HDfprintf(H5DEBUG(O), "< %a auto %lu remaining\n",
loc->addr,
(unsigned long)(loc->file->nopen_objs));
} else {
HDfprintf(H5DEBUG(O), "< %a\n", loc->addr);
}
} /* end if */
#endif
/*
* If the file open object count has reached the number of open mount points
* (each of which has a group open in the file) attempt to close the file.
*/
if(loc->file->nopen_objs == loc->file->mtab.nmounts) {
/* Attempt to close down the file hierarchy */
if(H5F_try_close(loc->file) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTCLOSEFILE, FAIL, "problem attempting file close")
} /* end if */
if(H5O_loc_free(loc) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTRELEASE, FAIL, "problem attempting to free location")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_close() */
/*-------------------------------------------------------------------------
* Function: H5O_reset
*
* Purpose: Some message data structures have internal fields that
* need to be freed. This function does that if appropriate
* but doesn't free NATIVE.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 12 1997
*
* Modifications:
* Changed to use IDs for types, instead of type objects, then
* call "real" routine.
* Quincey Koziol
* Feb 14 2003
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_reset(unsigned type_id, void *native)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
herr_t ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5O_reset,FAIL);
/* check args */
assert(type_id < NELMTS(H5O_msg_class_g));
type=H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
assert(type);
/* Call the "real" reset routine */
if((ret_value=H5O_reset_real(type, native)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_READERROR, FAIL, "unable to reset object header");
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5O_reset() */
/*-------------------------------------------------------------------------
* Function: H5O_reset_real
*
* Purpose: Some message data structures have internal fields that
* need to be freed. This function does that if appropriate
* but doesn't free NATIVE.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 12 1997
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O_reset_real(const H5O_msg_class_t *type, void *native)
{
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_reset_real);
/* check args */
assert(type);
if (native) {
if (type->reset) {
if ((type->reset) (native) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "reset method failed");
} else {
HDmemset(native, 0, type->native_size);
}
}
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5O_reset_real() */
/*-------------------------------------------------------------------------
* Function: H5O_free
*
* Purpose: Similar to H5O_reset() except it also frees the message
* pointer.
*
* Return: Success: NULL
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Thursday, May 21, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
void *
H5O_free (unsigned type_id, void *mesg)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
void * ret_value; /* Return value */
FUNC_ENTER_NOAPI_NOFUNC(H5O_free)
/* check args */
HDassert(type_id < NELMTS(H5O_msg_class_g));
type = H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
HDassert(type);
/* Call the "real" free routine */
ret_value = H5O_free_real(type, mesg);
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_free() */
/*-------------------------------------------------------------------------
* Function: H5O_free_mesg
*
* Purpose: Call H5O_free_real() on a message.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Tuesday, Sep 6, 2005
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_free_mesg(H5O_mesg_t *mesg)
{
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5O_free_mesg)
/* check args */
HDassert(mesg);
/* Free any native information */
if(mesg->flags & H5O_FLAG_SHARED)
mesg->native = H5O_free_real(H5O_MSG_SHARED, mesg->native);
else
mesg->native = H5O_free_real(mesg->type, mesg->native);
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5O_free_mesg() */
/*-------------------------------------------------------------------------
* Function: H5O_free_real
*
* Purpose: Similar to H5O_reset() except it also frees the message
* pointer.
*
* Return: Success: NULL
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Thursday, May 21, 1998
*
*-------------------------------------------------------------------------
*/
void *
H5O_free_real(const H5O_msg_class_t *type, void *msg_native)
{
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5O_free_real)
/* check args */
HDassert(type);
if(msg_native) {
H5O_reset_real(type, msg_native);
if (NULL!=(type->free))
(type->free)(msg_native);
else
H5MM_xfree (msg_native);
} /* end if */
FUNC_LEAVE_NOAPI(NULL)
} /* end H5O_free_real() */
/*-------------------------------------------------------------------------
* Function: H5O_copy
*
* Purpose: Copies a message. If MESG is is the null pointer then a null
* pointer is returned with no error.
*
* Return: Success: Ptr to the new message
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Thursday, May 21, 1998
*
* Modifications:
* Changed to use IDs for types, instead of type objects, then
* call "real" routine.
* Quincey Koziol
* Feb 14 2003
*
*-------------------------------------------------------------------------
*/
void *
H5O_copy (unsigned type_id, const void *mesg, void *dst)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
void *ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5O_copy, NULL);
/* check args */
assert(type_id < NELMTS(H5O_msg_class_g));
type=H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
assert(type);
/* Call the "real" copy routine */
if((ret_value=H5O_copy_real(type, mesg, dst))==NULL)
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, NULL, "unable to copy object header message");
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5O_copy() */
/*-------------------------------------------------------------------------
* Function: H5O_copy_real
*
* Purpose: Copies a message. If MESG is is the null pointer then a null
* pointer is returned with no error.
*
* Return: Success: Ptr to the new message
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Thursday, May 21, 1998
*
*-------------------------------------------------------------------------
*/
static void *
H5O_copy_real(const H5O_msg_class_t *type, const void *mesg, void *dst)
{
void *ret_value = NULL;
FUNC_ENTER_NOAPI_NOINIT(H5O_copy_real)
/* check args */
HDassert(type);
HDassert(type->copy);
if(mesg)
if(NULL == (ret_value = (type->copy)(mesg, dst, 0)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, NULL, "unable to copy object header message")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_copy_real() */
/*-------------------------------------------------------------------------
* Function: H5O_link
*
* Purpose: Adjust the link count for an object header by adding
* ADJUST to the link count.
*
* Return: Success: New link count
*
* Failure: Negative
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 5 1997
*
*-------------------------------------------------------------------------
*/
int
H5O_link(const H5O_loc_t *loc, int adjust, hid_t dxpl_id)
{
H5O_t *oh = NULL;
unsigned oh_flags = H5AC__NO_FLAGS_SET; /* used to indicate whether the
* object was deleted as a result
* of this action.
*/
int ret_value = FAIL;
FUNC_ENTER_NOAPI(H5O_link, FAIL)
/* check args */
HDassert(loc);
HDassert(loc->file);
HDassert(H5F_addr_defined(loc->addr));
if(adjust != 0 && 0 == (loc->file->intent & H5F_ACC_RDWR))
HGOTO_ERROR(H5E_OHDR, H5E_WRITEERROR, FAIL, "no write intent on file")
/* get header */
if(NULL == (oh = H5AC_protect(loc->file, dxpl_id, H5AC_OHDR, loc->addr,
NULL, NULL, H5AC_WRITE)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, FAIL, "unable to load object header")
/* adjust link count */
if(adjust < 0) {
if(oh->nlink + adjust < 0)
HGOTO_ERROR(H5E_OHDR, H5E_LINKCOUNT, FAIL, "link count would be negative")
oh->nlink += adjust;
oh_flags |= H5AC__DIRTIED_FLAG;
/* Check if the object should be deleted */
if(oh->nlink == 0) {
/* Check if the object is still open by the user */
if(H5FO_opened(loc->file, loc->addr) != NULL) {
/* Flag the object to be deleted when it's closed */
if(H5FO_mark(loc->file, loc->addr, TRUE) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTDELETE, FAIL, "can't mark object for deletion")
} /* end if */
else {
/* Delete object right now */
if(H5O_delete_oh(loc->file, dxpl_id, oh) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTDELETE, FAIL, "can't delete object from file")
/* Mark the object header as deleted */
oh_flags = H5C__DELETED_FLAG;
} /* end else */
} /* end if */
} else if (adjust > 0) {
/* A new object, or one that will be deleted */
if(oh->nlink == 0) {
/* Check if the object is current open, but marked for deletion */
if(H5FO_marked(loc->file, loc->addr) > 0) {
/* Remove "delete me" flag on the object */
if(H5FO_mark(loc->file, loc->addr, FALSE) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTDELETE, FAIL, "can't mark object for deletion")
} /* end if */
} /* end if */
oh->nlink += adjust;
oh_flags |= H5AC__DIRTIED_FLAG;
} /* end if */
/* Set return value */
ret_value = oh->nlink;
done:
if (oh && H5AC_unprotect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, oh, oh_flags) < 0)
HDONE_ERROR(H5E_OHDR, H5E_PROTECT, FAIL, "unable to release object header")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_link() */
/*-------------------------------------------------------------------------
* Function: H5O_count
*
* Purpose: Counts the number of messages in an object header which are a
* certain type.
*
* Return: Success: Number of messages of specified type.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* Tuesday, April 21, 1998
*
*-------------------------------------------------------------------------
*/
int
H5O_count(H5O_loc_t *loc, unsigned type_id, hid_t dxpl_id)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
int ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5O_count, FAIL)
/* Check args */
HDassert(loc);
HDassert(loc->file);
HDassert(H5F_addr_defined(loc->addr));
HDassert(type_id < NELMTS(H5O_msg_class_g));
type = H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
HDassert(type);
/* Call the "real" count routine */
if((ret_value = H5O_count_real(loc, type, dxpl_id)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOUNT, FAIL, "unable to count object header messages")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_count() */
/*-------------------------------------------------------------------------
* Function: H5O_count_real
*
* Purpose: Counts the number of messages in an object header which are a
* certain type.
*
* Return: Success: Number of messages of specified type.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* Tuesday, April 21, 1998
*
*-------------------------------------------------------------------------
*/
static int
H5O_count_real(H5O_loc_t *loc, const H5O_msg_class_t *type, hid_t dxpl_id)
{
H5O_t *oh = NULL;
int acc;
unsigned u;
int ret_value;
FUNC_ENTER_NOAPI(H5O_count_real, FAIL)
/* Check args */
HDassert(loc);
HDassert(loc->file);
HDassert(H5F_addr_defined(loc->addr));
HDassert(type);
/* Load the object header */
if(NULL == (oh = H5AC_protect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, NULL, NULL, H5AC_READ)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, FAIL, "unable to load object header")
/* Loop over all messages, counting the ones of the type looked for */
for(u = acc = 0; u < oh->nmesgs; u++)
if(oh->mesg[u].type == type)
acc++;
/* Set return value */
ret_value = acc;
done:
if (oh && H5AC_unprotect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, oh, H5AC__NO_FLAGS_SET) != SUCCEED)
HDONE_ERROR(H5E_OHDR, H5E_PROTECT, FAIL, "unable to release object header")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_count_real() */
/*-------------------------------------------------------------------------
* Function: H5O_exists
*
* Purpose: Determines if a particular message exists in an object
* header without trying to decode the message.
*
* Return: Success: FALSE if the message does not exist; TRUE if
* th message exists.
*
* Failure: FAIL if the existence of the message could
* not be determined due to some error such as
* not being able to read the object header.
*
* Programmer: Robb Matzke
* Monday, November 2, 1998
*
*-------------------------------------------------------------------------
*/
htri_t
H5O_exists(H5O_loc_t *loc, unsigned type_id, int sequence, hid_t dxpl_id)
{
H5O_t *oh = NULL; /* Object header for location */
htri_t ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5O_exists, FAIL)
HDassert(loc);
HDassert(loc->file);
HDassert(type_id < NELMTS(H5O_msg_class_g));
HDassert(sequence >= 0);
/* Load the object header */
if(NULL == (oh = H5AC_protect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, NULL, NULL, H5AC_READ)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, FAIL, "unable to load object header")
/* Call the "real" exists routine */
if((ret_value = H5O_exists_oh(oh, type_id, sequence)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_READERROR, FAIL, "unable to verify object header message")
done:
if(oh && H5AC_unprotect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, oh, H5AC__NO_FLAGS_SET) != SUCCEED)
HDONE_ERROR(H5E_OHDR, H5E_PROTECT, FAIL, "unable to release object header")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_exists() */
/*-------------------------------------------------------------------------
* Function: H5O_exists_oh
*
* Purpose: Determines if a particular message exists in an object
* header without trying to decode the message.
*
* Return: Success: FALSE if the message does not exist; TRUE if
* th message exists.
*
* Failure: FAIL if the existence of the message could
* not be determined due to some error such as
* not being able to read the object header.
*
* Programmer: Robb Matzke
* Monday, November 2, 1998
*
*-------------------------------------------------------------------------
*/
htri_t
H5O_exists_oh(H5O_t *oh, unsigned type_id, int sequence)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
unsigned u; /* Local index variable */
htri_t ret_value; /* Return value */
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5O_exists_oh)
HDassert(oh);
HDassert(type_id < NELMTS(H5O_msg_class_g));
type = H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
HDassert(type);
HDassert(sequence >= 0);
/* Scan through the messages looking for the right one */
for(u = 0; u < oh->nmesgs; u++) {
if(type->id != oh->mesg[u].type->id)
continue;
if(--sequence < 0)
break;
} /* end for */
/* Set return value */
ret_value = (sequence < 0);
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_exists_oh() */
/*-------------------------------------------------------------------------
* Function: H5O_read
*
* Purpose: Reads a message from an object header and returns a pointer
* to it. The caller will usually supply the memory through
* MESG and the return value will be MESG. But if MESG is
* the null pointer, then this function will malloc() memory
* to hold the result and return its pointer instead.
*
* Return: Success: Ptr to message in native format. The message
* should be freed by calling H5O_reset(). If
* MESG is a null pointer then the caller should
* also call H5MM_xfree() on the return value
* after calling H5O_reset().
*
* Failure: NULL
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 6 1997
*
*-------------------------------------------------------------------------
*/
void *
H5O_read(const H5O_loc_t *loc, unsigned type_id, int sequence, void *mesg, hid_t dxpl_id)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
void *ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5O_read, NULL)
/* check args */
HDassert(loc);
HDassert(loc->file);
HDassert(H5F_addr_defined(loc->addr));
HDassert(type_id < NELMTS(H5O_msg_class_g));
type = H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
HDassert(type);
HDassert(sequence >= 0);
/* Call the "real" read routine */
if((ret_value = H5O_read_real(loc, type, sequence, mesg, dxpl_id)) == NULL)
HGOTO_ERROR(H5E_OHDR, H5E_READERROR, NULL, "unable to load object header")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_read() */
/*-------------------------------------------------------------------------
* Function: H5O_read_real
*
* Purpose: Reads a message from an object header and returns a pointer
* to it. The caller will usually supply the memory through
* MESG and the return value will be MESG. But if MESG is
* the null pointer, then this function will malloc() memory
* to hold the result and return its pointer instead.
*
* Return: Success: Ptr to message in native format. The message
* should be freed by calling H5O_reset(). If
* MESG is a null pointer then the caller should
* also call H5MM_xfree() on the return value
* after calling H5O_reset().
*
* Failure: NULL
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 6 1997
*
*-------------------------------------------------------------------------
*/
void *
H5O_read_real(const H5O_loc_t *loc, const H5O_msg_class_t *type, int sequence, void *mesg, hid_t dxpl_id)
{
H5O_t *oh = NULL;
int idx;
void *ret_value = NULL;
FUNC_ENTER_NOAPI_NOINIT(H5O_read_real)
/* check args */
HDassert(loc);
HDassert(loc->file);
HDassert(H5F_addr_defined(loc->addr));
HDassert(type);
HDassert(sequence >= 0);
/* copy the message to the user-supplied buffer */
if(NULL == (oh = H5AC_protect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, NULL, NULL, H5AC_READ)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, NULL, "unable to load object header")
/* can we get it from the object header? */
if((idx = H5O_find_in_ohdr(loc->file, dxpl_id, oh, &type, sequence)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_NOTFOUND, NULL, "unable to find message in object header")
if(oh->mesg[idx].flags & H5O_FLAG_SHARED) {
/*
* If the message is shared then then the native pointer points to an
* H5O_MSG_SHARED message. We use that information to look up the real
* message in the global heap or some other object header.
*/
H5O_shared_t *shared;
shared = (H5O_shared_t *)(oh->mesg[idx].native);
ret_value = H5O_shared_read(loc->file, dxpl_id, shared, type, mesg);
} else {
/*
* The message is not shared, but rather exists in the object
* header. The object header caches the native message (along with
* the raw message) so we must copy the native message before
* returning.
*/
if(NULL==(ret_value = (type->copy) (oh->mesg[idx].native, mesg, 0)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, NULL, "unable to copy message to user space")
} /* end else */
done:
if(oh && H5AC_unprotect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, oh, H5AC__NO_FLAGS_SET) < 0)
HDONE_ERROR(H5E_OHDR, H5E_PROTECT, NULL, "unable to release object header")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_read_real() */
/*-------------------------------------------------------------------------
* Function: H5O_find_in_ohdr
*
* Purpose: Find a message in the object header without consulting
* a symbol table entry.
*
* Return: Success: Index number of message.
* Failure: Negative
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 6 1997
*
* Modifications:
* Robb Matzke, 1999-07-28
* The ADDR argument is passed by value.
*
* Bill Wendling, 2003-09-30
* Modified so that the object header needs to be AC_protected
* before calling this function.
*-------------------------------------------------------------------------
*/
static unsigned
H5O_find_in_ohdr(H5F_t *f, hid_t dxpl_id, H5O_t *oh, const H5O_msg_class_t **type_p, int sequence)
{
unsigned u;
unsigned ret_value;
FUNC_ENTER_NOAPI_NOINIT(H5O_find_in_ohdr);
/* Check args */
assert(f);
assert(oh);
assert(type_p);
/* Scan through the messages looking for the right one */
for (u = 0; u < oh->nmesgs; u++) {
if (*type_p && (*type_p)->id != oh->mesg[u].type->id)
continue;
if (--sequence < 0)
break;
}
if (sequence >= 0)
HGOTO_ERROR(H5E_OHDR, H5E_NOTFOUND, UFAIL, "unable to find object header message");
/*
* Decode the message if necessary. If the message is shared then decode
* a shared message, ignoring the message type.
*/
LOAD_NATIVE(f, dxpl_id, &(oh->mesg[u]), UFAIL)
/*
* Return the message type. If this is a shared message then return the
* pointed-to type.
*/
*type_p = oh->mesg[u].type;
/* Set return value */
ret_value=u;
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5O_modify
*
* Purpose: Modifies an existing message or creates a new message.
* The cache fields in that symbol table entry ENT are *not*
* updated, you must do that separately because they often
* depend on multiple object header messages. Besides, we
* don't know which messages will be constant and which will
* not.
*
* The OVERWRITE argument is either a sequence number of a
* message to overwrite (usually zero) or the constant
* H5O_NEW_MESG (-1) to indicate that a new message is to
* be created. If the message to overwrite doesn't exist then
* it is created (but only if it can be inserted so its sequence
* number is OVERWRITE; that is, you can create a message with
* the sequence number 5 if there is no message with sequence
* number 4).
*
* The UPDATE_TIME argument is a boolean that allows the caller
* to skip updating the modification time. This is useful when
* several calls to H5O_modify will be made in a sequence.
*
* Return: Success: The sequence number of the message that
* was modified or created.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 6 1997
*
*-------------------------------------------------------------------------
*/
int
H5O_modify(H5O_loc_t *loc, unsigned type_id, int overwrite,
unsigned flags, unsigned update_flags, const void *mesg, hid_t dxpl_id)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
int ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5O_modify, FAIL)
/* check args */
HDassert(loc);
HDassert(loc->file);
HDassert(H5F_addr_defined(loc->addr));
HDassert(type_id < NELMTS(H5O_msg_class_g));
type = H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
HDassert(type);
HDassert(mesg);
HDassert(0 == (flags & ~H5O_FLAG_BITS));
/* Call the "real" modify routine */
if((ret_value = H5O_modify_real(loc, type, overwrite, flags, update_flags, mesg, dxpl_id)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_WRITEERROR, FAIL, "unable to write object header message")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_modify() */
/*-------------------------------------------------------------------------
* Function: H5O_modify_real
*
* Purpose: Modifies an existing message or creates a new message.
* The cache fields in that symbol table entry ENT are *not*
* updated, you must do that separately because they often
* depend on multiple object header messages. Besides, we
* don't know which messages will be constant and which will
* not.
*
* The OVERWRITE argument is either a sequence number of a
* message to overwrite (usually zero) or the constant
* H5O_NEW_MESG (-1) to indicate that a new message is to
* be created. If the message to overwrite doesn't exist then
* it is created (but only if it can be inserted so its sequence
* number is OVERWRITE; that is, you can create a message with
* the sequence number 5 if there is no message with sequence
* number 4).
*
* The UPDATE_TIME argument is a boolean that allows the caller
* to skip updating the modification time. This is useful when
* several calls to H5O_modify will be made in a sequence.
*
* Return: Success: The sequence number of the message that
* was modified or created.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 6 1997
*
*-------------------------------------------------------------------------
*/
static int
H5O_modify_real(H5O_loc_t *loc, const H5O_msg_class_t *type, int overwrite,
unsigned flags, unsigned update_flags, const void *mesg, hid_t dxpl_id)
{
H5O_t *oh = NULL;
unsigned oh_flags = H5AC__NO_FLAGS_SET;
int sequence;
unsigned idx; /* Index of message to modify */
H5O_mesg_t *idx_msg; /* Pointer to message to modify */
H5O_shared_t sh_mesg;
int ret_value;
FUNC_ENTER_NOAPI_NOINIT(H5O_modify_real)
/* check args */
HDassert(loc);
HDassert(loc->file);
HDassert(H5F_addr_defined(loc->addr));
HDassert(type);
HDassert(mesg);
HDassert(0 == (flags & ~H5O_FLAG_BITS));
if(0 == (loc->file->intent & H5F_ACC_RDWR))
HGOTO_ERROR(H5E_OHDR, H5E_WRITEERROR, FAIL, "no write intent on file")
if(NULL == (oh = H5AC_protect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, NULL, NULL, H5AC_WRITE)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, FAIL, "unable to load object header")
/* Count similar messages */
for(idx = 0, sequence = -1, idx_msg=&oh->mesg[0]; idx < oh->nmesgs; idx++, idx_msg++) {
if(type->id != idx_msg->type->id)
continue;
if(++sequence == overwrite)
break;
} /* end for */
/* Was the right message found? */
if(overwrite >= 0 && (idx >= oh->nmesgs || sequence != overwrite)) {
/* But can we insert a new one with this sequence number? */
if(overwrite == sequence + 1)
overwrite = -1;
else
HGOTO_ERROR(H5E_OHDR, H5E_NOTFOUND, FAIL, "message not found")
} /* end if */
/* Check for creating new message */
if(overwrite < 0) {
/* Create a new message */
if((idx = H5O_new_mesg(loc->file, oh, &flags, type, mesg, &sh_mesg, &type, &mesg, dxpl_id, &oh_flags)) == UFAIL)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to create new message")
/* Set the correct sequence number for the message created */
sequence++;
} else if(oh->mesg[idx].flags & H5O_FLAG_CONSTANT) {
HGOTO_ERROR(H5E_OHDR, H5E_WRITEERROR, FAIL, "unable to modify constant message")
} else if(oh->mesg[idx].flags & H5O_FLAG_SHARED) {
HGOTO_ERROR(H5E_OHDR, H5E_WRITEERROR, FAIL, "unable to modify shared (constant) message")
}
/* Write the information to the message */
if(H5O_write_mesg(oh, idx, type, mesg, flags, update_flags, &oh_flags) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to write message")
/* Update the modification time message if any */
if(update_flags & H5O_UPDATE_TIME)
H5O_touch_oh(loc->file, dxpl_id, oh, FALSE, &oh_flags);
/* Set return value */
ret_value = sequence;
done:
if(oh && H5AC_unprotect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, oh, oh_flags) < 0)
HDONE_ERROR(H5E_OHDR, H5E_PROTECT, FAIL, "unable to release object header")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_modify_real() */
/*-------------------------------------------------------------------------
* Function: H5O_protect
*
* Purpose: Wrapper around H5AC_protect for use during a H5O_protect->
* H5O_append->...->H5O_append->H5O_unprotect sequence of calls
* during an object's creation.
*
* Return: Success: Pointer to the object header structure for the
* object.
*
* Failure: NULL
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Dec 31 2002
*
*-------------------------------------------------------------------------
*/
H5O_t *
H5O_protect(H5O_loc_t *loc, hid_t dxpl_id)
{
H5O_t *ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5O_protect, NULL)
/* check args */
HDassert(loc);
HDassert(loc->file);
HDassert(H5F_addr_defined(loc->addr));
if(0 == (loc->file->intent & H5F_ACC_RDWR))
HGOTO_ERROR(H5E_OHDR, H5E_WRITEERROR, NULL, "no write intent on file")
if(NULL == (ret_value = H5AC_protect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, NULL, NULL, H5AC_WRITE)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, NULL, "unable to load object header")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_protect() */
/*-------------------------------------------------------------------------
* Function: H5O_unprotect
*
* Purpose: Wrapper around H5AC_unprotect for use during a H5O_protect->
* H5O_append->...->H5O_append->H5O_unprotect sequence of calls
* during an object's creation.
*
* Return: Success: Non-negative
*
* Failure: Negative
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Dec 31 2002
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_unprotect(H5O_loc_t *loc, H5O_t *oh, hid_t dxpl_id, unsigned oh_flags)
{
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5O_unprotect, FAIL)
/* check args */
HDassert(loc);
HDassert(loc->file);
HDassert(H5F_addr_defined(loc->addr));
HDassert(oh);
if(H5AC_unprotect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, oh, oh_flags) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_PROTECT, FAIL, "unable to release object header")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_unprotect() */
/*-------------------------------------------------------------------------
* Function: H5O_append
*
* Purpose: Simplified version of H5O_modify, used when creating a new
* object header message (usually during object creation)
*
* Return: Success: The sequence number of the message that
* was created.
*
* Failure: Negative
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Dec 31 2002
*
*-------------------------------------------------------------------------
*/
int
H5O_append(H5F_t *f, hid_t dxpl_id, H5O_t *oh, unsigned type_id, unsigned flags,
const void *mesg, unsigned * oh_flags_ptr)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
int ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5O_append,FAIL);
/* check args */
assert(f);
assert(oh);
assert(type_id < NELMTS(H5O_msg_class_g));
type=H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
assert(type);
assert(0==(flags & ~H5O_FLAG_BITS));
assert(mesg);
assert(oh_flags_ptr);
/* Call the "real" append routine */
if((ret_value=H5O_append_real( f, dxpl_id, oh, type, flags, mesg, oh_flags_ptr)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_WRITEERROR, FAIL, "unable to append to object header");
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5O_append() */
/*-------------------------------------------------------------------------
* Function: H5O_append_real
*
* Purpose: Simplified version of H5O_modify, used when creating a new
* object header message (usually during object creation)
*
* Return: Success: The sequence number of the message that
* was created.
*
* Failure: Negative
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Dec 31 2002
*
*-------------------------------------------------------------------------
*/
static int
H5O_append_real(H5F_t *f, hid_t dxpl_id, H5O_t *oh, const H5O_msg_class_t *type,
unsigned flags, const void *mesg, unsigned * oh_flags_ptr)
{
unsigned idx; /* Index of message to modify */
H5O_shared_t sh_mesg;
int ret_value = FAIL;
FUNC_ENTER_NOAPI_NOINIT(H5O_append_real);
/* check args */
assert(f);
assert(oh);
assert(type);
assert(0==(flags & ~H5O_FLAG_BITS));
assert(mesg);
assert(oh_flags_ptr);
/* Create a new message */
if((idx=H5O_new_mesg(f,oh,&flags,type,mesg,&sh_mesg,&type,&mesg,dxpl_id,oh_flags_ptr))==UFAIL)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to create new message");
/* Write the information to the message */
if(H5O_write_mesg(oh,idx,type,mesg,flags,0,oh_flags_ptr) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to write message");
/* Set return value */
ret_value = idx;
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5O_append_real () */
/*-------------------------------------------------------------------------
* Function: H5O_new_mesg
*
* Purpose: Create a new message in an object header
*
* Return: Success: Index of message
* Failure: Negative
*
* Programmer: Quincey Koziol
* Friday, September 3, 2003
*
*-------------------------------------------------------------------------
*/
static unsigned
H5O_new_mesg(H5F_t *f, H5O_t *oh, unsigned *flags, const H5O_msg_class_t *orig_type,
const void *orig_mesg, H5O_shared_t *sh_mesg, const H5O_msg_class_t **new_type,
const void **new_mesg, hid_t dxpl_id, unsigned * oh_flags_ptr)
{
size_t size; /* Size of space allocated for object header */
unsigned ret_value=UFAIL; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_new_mesg);
/* check args */
assert(f);
assert(oh);
assert(flags);
assert(orig_type);
assert(orig_mesg);
assert(sh_mesg);
assert(new_mesg);
assert(new_type);
assert(oh_flags_ptr);
/* Check for shared message */
if (*flags & H5O_FLAG_SHARED) {
HDmemset(sh_mesg,0,sizeof(H5O_shared_t));
if (NULL==orig_type->get_share)
HGOTO_ERROR(H5E_OHDR, H5E_UNSUPPORTED, UFAIL, "message class is not sharable");
if ((orig_type->get_share)(f, orig_mesg, sh_mesg/*out*/) < 0) {
/*
* If the message isn't shared then turn off the shared bit
* and treat it as an unshared message.
*/
H5E_clear_stack (NULL);
*flags &= ~H5O_FLAG_SHARED;
} else {
/* Change type & message to use shared information */
*new_type=H5O_MSG_SHARED;
*new_mesg=sh_mesg;
} /* end else */
} /* end if */
else {
*new_type=orig_type;
*new_mesg=orig_mesg;
} /* end else */
/* Compute the size needed to store the message on disk */
if ((size = ((*new_type)->raw_size) (f, *new_mesg)) >=H5O_MAX_SIZE)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, UFAIL, "object header message is too large");
/* Allocate space in the object headed for the message */
if ((ret_value = H5O_alloc(f, dxpl_id, oh, orig_type, size, oh_flags_ptr)) == UFAIL)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, UFAIL, "unable to allocate space for message");
/* Increment any links in message */
if((*new_type)->link && ((*new_type)->link)(f,dxpl_id,(*new_mesg)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_LINKCOUNT, UFAIL, "unable to adjust shared object link count");
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5O_new_mesg() */
/*-------------------------------------------------------------------------
* Function: H5O_write_mesg
*
* Purpose: Write message to object header
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Friday, September 3, 2003
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O_write_mesg(H5O_t *oh, unsigned idx, const H5O_msg_class_t *type,
const void *mesg, unsigned flags, unsigned update_flags,
unsigned * oh_flags_ptr)
{
H5O_mesg_t *idx_msg; /* Pointer to message to modify */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_write_mesg);
/* check args */
assert(oh);
assert(type);
assert(mesg);
assert(oh_flags_ptr);
/* Set pointer to the correct message */
idx_msg=&oh->mesg[idx];
/* Reset existing native information */
if(!(update_flags&H5O_UPDATE_DATA_ONLY))
H5O_reset_real(type, idx_msg->native);
/* Copy the native value for the message */
if (NULL == (idx_msg->native = (type->copy) (mesg, idx_msg->native, update_flags)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to copy message to object header");
idx_msg->flags = flags;
idx_msg->dirty = TRUE;
*oh_flags_ptr |= H5AC__DIRTIED_FLAG;
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5O_write_mesg() */
/*-------------------------------------------------------------------------
* Function: H5O_touch_oh
*
* Purpose: If FORCE is non-zero then create a modification time message
* unless one already exists. Then update any existing
* modification time message with the current time.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Monday, July 27, 1998
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_touch_oh(H5F_t *f,
hid_t dxpl_id,
H5O_t *oh,
hbool_t force,
unsigned * oh_flags_ptr)
{
unsigned idx;
time_t now;
size_t size;
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_touch_oh);
assert(oh);
assert(oh_flags_ptr);
/* Look for existing message */
for (idx=0; idx < oh->nmesgs; idx++) {
if (H5O_MSG_MTIME==oh->mesg[idx].type || H5O_MSG_MTIME_NEW==oh->mesg[idx].type)
break;
}
#ifdef H5_HAVE_GETTIMEOFDAY
{
struct timeval now_tv;
HDgettimeofday(&now_tv, NULL);
now = now_tv.tv_sec;
}
#else /* H5_HAVE_GETTIMEOFDAY */
now = HDtime(NULL);
#endif /* H5_HAVE_GETTIMEOFDAY */
/* Create a new message */
if (idx==oh->nmesgs) {
if (!force)
HGOTO_DONE(SUCCEED); /*nothing to do*/
size = (H5O_MSG_MTIME_NEW->raw_size)(f, &now);
if ((idx=H5O_alloc(f, dxpl_id, oh, H5O_MSG_MTIME_NEW, size, oh_flags_ptr))==UFAIL)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to allocate space for modification time message");
}
/* Update the native part */
if (NULL==oh->mesg[idx].native) {
if (NULL==(oh->mesg[idx].native = H5FL_MALLOC(time_t)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "memory allocation failed for modification time message");
}
*((time_t*)(oh->mesg[idx].native)) = now;
oh->mesg[idx].dirty = TRUE;
*oh_flags_ptr |= H5AC__DIRTIED_FLAG;
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5O_touch
*
* Purpose: Touch an object by setting the modification time to the
* current time and marking the object as dirty. Unless FORCE
* is non-zero, nothing happens if there is no MTIME message in
* the object header.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Monday, July 27, 1998
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_touch(H5O_loc_t *loc, hbool_t force, hid_t dxpl_id)
{
H5O_t *oh = NULL;
unsigned oh_flags = H5AC__NO_FLAGS_SET;
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5O_touch, FAIL)
/* check args */
HDassert(loc);
HDassert(loc->file);
HDassert(H5F_addr_defined(loc->addr));
if(0 == (loc->file->intent & H5F_ACC_RDWR))
HGOTO_ERROR(H5E_OHDR, H5E_WRITEERROR, FAIL, "no write intent on file")
/* Get the object header */
if(NULL == (oh = H5AC_protect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, NULL, NULL, H5AC_WRITE)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, FAIL, "unable to load object header")
/* Create/Update the modification time message */
if(H5O_touch_oh(loc->file, dxpl_id, oh, force, &oh_flags) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to update object modificaton time")
done:
if(oh && H5AC_unprotect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, oh, oh_flags) < 0)
HDONE_ERROR(H5E_OHDR, H5E_PROTECT, FAIL, "unable to release object header")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_touch() */
#ifdef H5O_ENABLE_BOGUS
/*-------------------------------------------------------------------------
* Function: H5O_bogus_oh
*
* Purpose: Create a "bogus" message unless one already exists.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* <koziol@ncsa.uiuc.edu>
* Tuesday, January 21, 2003
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_bogus_oh(H5F_t *f, hid_t dxpl_id, H5O_t *oh, hbool_t * oh_flags_ptr)
{
int idx;
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER(H5O_bogus_oh, FAIL)
HDassert(f);
HDassert(oh);
HDassert(oh_flags_ptr);
/* Look for existing message */
for(idx = 0; idx < oh->nmesgs; idx++)
if(H5O_MSG_BOGUS == oh->mesg[idx].type)
break;
/* Create a new message */
if(idx == oh->nmesgs) {
size_t size = (H5O_MSG_BOGUS->raw_size)(f, NULL);
if((idx = H5O_alloc(f, dxpl_id, oh, H5O_MSG_BOGUS, size, oh_flags_ptr)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to allocate space for 'bogus' message")
/* Allocate the native message in memory */
if(NULL == (oh->mesg[idx].native = H5MM_malloc(sizeof(H5O_bogus_t))))
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "memory allocation failed for 'bogus' message")
/* Update the native part */
((H5O_bogus_t *)(oh->mesg[idx].native))->u = H5O_BOGUS_VALUE;
/* Mark the message and object header as dirty */
*oh_flags_ptr = TRUE;
oh->mesg[idx].dirty = TRUE;
oh->dirty = TRUE;
} /* end if */
done:
FUNC_LEAVE(ret_value)
} /* end H5O_bogus_oh() */
/*-------------------------------------------------------------------------
* Function: H5O_bogus
*
* Purpose: Create a "bogus" message in an object.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* <koziol@ncsa.uiuc.edu>
* Tuesday, January 21, 2003
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_bogus(H5O_loc_t *loc, hid_t dxpl_id)
{
H5O_t *oh = NULL;
unsigned oh_flags = H5AC__NO_FLAGS_SET;
herr_t ret_value = SUCCEED;
FUNC_ENTER(H5O_bogus, FAIL)
/* check args */
HDassert(loc);
HDassert(loc->file);
HDassert(H5F_addr_defined(loc->addr));
/* Verify write access to the file */
if(0 == (loc->file->intent & H5F_ACC_RDWR))
HGOTO_ERROR(H5E_OHDR, H5E_WRITEERROR, FAIL, "no write intent on file")
/* Get the object header */
if(NULL == (oh = H5AC_protect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, NULL, NULL, H5AC_WRITE)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, FAIL, "unable to load object header")
/* Create the "bogus" message */
if(H5O_bogus_oh(ent->file, dxpl_id, oh, &oh_flags) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to update object 'bogus' message")
done:
if(oh && H5AC_unprotect(ent->file, dxpl_id, H5AC_OHDR, ent->header, oh, oh_flags) < 0)
HDONE_ERROR(H5E_OHDR, H5E_PROTECT, FAIL, "unable to release object header")
FUNC_LEAVE(ret_value)
} /* end H5O_bogus() */
#endif /* H5O_ENABLE_BOGUS */
/*-------------------------------------------------------------------------
* Function: H5O_remove
*
* Purpose: Removes the specified message from the object header.
* If sequence is H5O_ALL (-1) then all messages of the
* specified type are removed. Removing a message causes
* the sequence numbers to change for subsequent messages of
* the same type.
*
* No attempt is made to join adjacent free areas of the
* object header into a single larger free area.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 28 1997
*
* Modifications:
*
* Robb Matzke, 7 Jan 1998
* Does not remove constant messages.
*
* Changed to use IDs for types, instead of type objects, then
* call "real" routine.
* Quincey Koziol
* Feb 14 2003
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_remove(H5O_loc_t *loc, unsigned type_id, int sequence, hbool_t adj_link, hid_t dxpl_id)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
herr_t ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5O_remove, FAIL)
/* check args */
HDassert(loc);
HDassert(loc->file);
HDassert(H5F_addr_defined(loc->addr));
HDassert(type_id < NELMTS(H5O_msg_class_g));
type = H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
HDassert(type);
/* Call the "real" remove routine */
if((ret_value = H5O_remove_real(loc, type, sequence, NULL, NULL, adj_link, dxpl_id)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTDELETE, FAIL, "unable to remove object header message")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_remove() */
/*-------------------------------------------------------------------------
* Function: H5O_remove_op
*
* Purpose: Removes messages from the object header that a callback
* routine indicates should be removed.
*
* No attempt is made to join adjacent free areas of the
* object header into a single larger free area.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Sep 6 2005
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_remove_op(const H5O_loc_t *loc, unsigned type_id, int sequence,
H5O_operator_t op, void *op_data, hbool_t adj_link, hid_t dxpl_id)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
herr_t ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5O_remove_op, FAIL)
/* check args */
HDassert(loc);
HDassert(loc->file);
HDassert(H5F_addr_defined(loc->addr));
HDassert(type_id < NELMTS(H5O_msg_class_g));
type = H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
HDassert(type);
/* Call the "real" remove routine */
if((ret_value = H5O_remove_real(loc, type, sequence, op, op_data, adj_link, dxpl_id)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTDELETE, FAIL, "unable to remove object header message")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_remove_op() */
/*-------------------------------------------------------------------------
* Function: H5O_remove_cb
*
* Purpose: Object header iterator callback routine to remove messages
* of a particular type that match a particular sequence number,
* or all messages if the sequence number is H5O_ALL (-1).
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Sep 6 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O_remove_cb(H5O_mesg_t *mesg/*in,out*/, unsigned idx, unsigned * oh_flags_ptr,
void *_udata/*in,out*/)
{
H5O_iter_ud1_t *udata = (H5O_iter_ud1_t *)_udata; /* Operator user data */
htri_t try_remove = FALSE; /* Whether to try removing a message */
herr_t ret_value = H5O_ITER_CONT; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_remove_cb)
/* check args */
HDassert(mesg);
/* Check for callback routine */
if(udata->op) {
/* Call the iterator callback */
if((try_remove = (udata->op)(mesg->native, idx, udata->op_data)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTDELETE, H5O_ITER_ERROR, "object header message deletion callback failed")
} /* end if */
else {
/* If there's no callback routine, does the sequence # match? */
if((int)idx == udata->sequence || H5O_ALL == udata->sequence)
try_remove = H5O_ITER_STOP;
} /* end else */
/* Try removing the message, if indicated */
if(try_remove) {
/*
* Keep track of how many times we failed trying to remove constant
* messages.
*/
if(mesg->flags & H5O_FLAG_CONSTANT) {
udata->nfailed++;
} /* end if */
else {
/* Free any space referred to in the file from this message */
if(H5O_delete_mesg(udata->f, udata->dxpl_id, mesg, udata->adj_link) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTDELETE, H5O_ITER_ERROR, "unable to delete file space for object header message")
/* Free any native information */
H5O_free_mesg(mesg);
/* Change message type to nil and zero it */
mesg->type = H5O_MSG_NULL;
HDmemset(mesg->raw, 0, mesg->raw_size);
/* Indicate that the message was modified */
mesg->dirty = TRUE;
/* Indicate that the object header was modified */
*oh_flags_ptr |= H5AC__DIRTIED_FLAG;
} /* end else */
/* Break out now, if we've found the correct message */
if(udata->sequence == H5O_FIRST || udata->sequence != H5O_ALL)
HGOTO_DONE(H5O_ITER_STOP)
} /* end if */
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_remove_cb() */
/*-------------------------------------------------------------------------
* Function: H5O_remove_real
*
* Purpose: Removes the specified message from the object header.
* If sequence is H5O_ALL (-1) then all messages of the
* specified type are removed. Removing a message causes
* the sequence numbers to change for subsequent messages of
* the same type.
*
* No attempt is made to join adjacent free areas of the
* object header into a single larger free area.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 28 1997
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O_remove_real(const H5O_loc_t *loc, const H5O_msg_class_t *type, int sequence,
H5O_operator_t app_op, void *op_data, hbool_t adj_link, hid_t dxpl_id)
{
H5O_iter_ud1_t udata; /* User data for iterator */
H5O_mesg_operator_t op; /* Wrapper for operator */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_remove_real)
/* check args */
HDassert(loc);
HDassert(loc->file);
HDassert(type);
if (0==(loc->file->intent & H5F_ACC_RDWR))
HGOTO_ERROR(H5E_HEAP, H5E_WRITEERROR, FAIL, "no write intent on file")
/* Set up iterator operator data */
udata.f = loc->file;
udata.dxpl_id = dxpl_id;
udata.sequence = sequence;
udata.nfailed = 0;
udata.op = app_op;
udata.op_data = op_data;
udata.adj_link = adj_link;
/* Iterate over the messages, deleting appropriate one(s) */
op.lib_op = H5O_remove_cb;
if(H5O_iterate_real(loc, type, H5AC_WRITE, TRUE, op, &udata, dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "error iterating over messages")
/* Fail if we tried to remove any constant messages */
if(udata.nfailed)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to remove constant message(s)")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_remove_real() */
/*-------------------------------------------------------------------------
*
* Function: H5O_alloc_msgs
*
* Purpose: Allocate more messages for a header
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Nov 21 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O_alloc_msgs(H5O_t *oh, size_t min_alloc)
{
size_t old_alloc; /* Old number of messages allocated */
size_t na; /* New number of messages allocated */
H5O_mesg_t *new_mesg; /* Pointer to new message array */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_alloc_msgs)
/* check args */
HDassert(oh);
/* Initialize number of messages information */
old_alloc = oh->alloc_nmesgs;
na = oh->alloc_nmesgs + MAX (H5O_NMESGS, min_alloc);
/* Attempt to allocate more memory */
if(NULL == (new_mesg = H5FL_SEQ_REALLOC(H5O_mesg_t, oh->mesg, na)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
/* Update ohdr information */
oh->alloc_nmesgs = na;
oh->mesg = new_mesg;
/* Set new object header info to zeros */
HDmemset(&oh->mesg[old_alloc], 0, (oh->alloc_nmesgs - old_alloc) * sizeof(H5O_mesg_t));
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5O_alloc_msgs() */
/*-------------------------------------------------------------------------
*
* Function: H5O_move_msgs_forward
*
* Purpose: Move messages toward first chunk
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Oct 17 2005
*
*-------------------------------------------------------------------------
*/
static htri_t
H5O_move_msgs_forward(H5F_t *f, H5O_t *oh, hid_t dxpl_id)
{
hbool_t packed_msg; /* Flag to indicate that messages were packed */
hbool_t did_packing = FALSE; /* Whether any messages were packed */
htri_t ret_value; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_move_msgs_forward)
/* check args */
HDassert(oh);
/* Loop until no messages packed */
/* (Double loop is not very efficient, but it would be some extra work to add
* a list of messages to each chunk -QAK)
*/
do {
H5O_mesg_t *curr_msg; /* Pointer to current message to operate on */
unsigned u; /* Local index variable */
/* Reset packed messages flag */
packed_msg = FALSE;
/* Scan through messages for messages that can be moved earlier in chunks */
for(u = 0, curr_msg = &oh->mesg[0]; u < oh->nmesgs; u++, curr_msg++) {
if(H5O_NULL_ID == curr_msg->type->id) {
H5O_chunk_t *chunk; /* Pointer to chunk that null message is in */
/* Check if null message is not last in chunk */
chunk = &(oh->chunk[curr_msg->chunkno]);
if((curr_msg->raw + curr_msg->raw_size) != (chunk->image + chunk->size)) {
H5O_mesg_t *nonnull_msg; /* Pointer to current message to operate on */
unsigned v; /* Local index variable */
/* Loop over messages again, looking for the message in the chunk after the null message */
for(v = 0, nonnull_msg = &oh->mesg[0]; v < oh->nmesgs; v++, nonnull_msg++) {
/* Locate message that is immediately after the null message */
if((curr_msg->chunkno == nonnull_msg->chunkno) &&
((curr_msg->raw + curr_msg->raw_size) == (nonnull_msg->raw - H5O_SIZEOF_MSGHDR(f)))) {
/* Don't swap messages if the second message is also a null message */
/* (We'll merge them together later, in another routine) */
if(H5O_NULL_ID != nonnull_msg->type->id) {
/* Make certain non-null message has been translated into native form */
/* (So that when we mark it dirty, it will get copied back into raw chunk image) */
LOAD_NATIVE(f, dxpl_id, nonnull_msg, FAIL)
/* Adjust non-null message's offset in chunk */
nonnull_msg->raw = curr_msg->raw;
/* Adjust null message's offset in chunk */
curr_msg->raw = nonnull_msg->raw +
nonnull_msg->raw_size + H5O_SIZEOF_MSGHDR(f);
/* Mark messages dirty */
curr_msg->dirty = TRUE;
nonnull_msg->dirty = TRUE;
/* Set the flag to indicate that the null message
* was packed - if its not at the end its chunk,
* we'll move it again on the next pass.
*/
packed_msg = TRUE;
} /* end if */
/* Break out of loop */
break;
} /* end if */
} /* end for */
/* Should have been message after null message */
HDassert(v < oh->nmesgs);
} /* end if */
} /* end if */
else {
H5O_mesg_t *null_msg; /* Pointer to current message to operate on */
unsigned v; /* Local index variable */
/* Loop over messages again, looking for large enough null message in earlier chunk */
for(v = 0, null_msg = &oh->mesg[0]; v < oh->nmesgs; v++, null_msg++) {
if(H5O_NULL_ID == null_msg->type->id && curr_msg->chunkno > null_msg->chunkno
&& curr_msg->raw_size <= null_msg->raw_size) {
unsigned old_chunkno; /* Old message information */
uint8_t *old_raw;
size_t old_raw_size;
/* Keep old information about non-null message */
old_chunkno = curr_msg->chunkno;
old_raw = curr_msg->raw;
old_raw_size = curr_msg->raw_size;
/* Make certain non-null message has been translated into native form */
/* (So that when we mark it dirty, it will get copied back into raw chunk image) */
LOAD_NATIVE(f, dxpl_id, curr_msg, FAIL)
/* Change information for non-null message */
if(curr_msg->raw_size == null_msg->raw_size) {
/* Point non-null message at null message's space */
curr_msg->chunkno = null_msg->chunkno;
curr_msg->raw = null_msg->raw;
/* Mark non-null message dirty */
curr_msg->dirty = TRUE;
/* Point null message at old non-null space */
/* (Instead of freeing it and allocating new message) */
null_msg->chunkno = old_chunkno;
null_msg->raw = old_raw;
/* Mark null message dirty */
null_msg->dirty = TRUE;
} /* end if */
else {
unsigned new_null_msg; /* Message index for new null message */
/* Point non-null message at null message's space */
curr_msg->chunkno = null_msg->chunkno;
curr_msg->raw = null_msg->raw;
/* Mark non-null message dirty */
curr_msg->dirty = TRUE;
/* Adjust null message's size & offset */
null_msg->raw += curr_msg->raw_size + H5O_SIZEOF_MSGHDR(f);
null_msg->raw_size -= curr_msg->raw_size + H5O_SIZEOF_MSGHDR(f);
/* Mark null message dirty */
null_msg->dirty = TRUE;
/* Create new null message for previous location of non-null message */
if(oh->nmesgs >= oh->alloc_nmesgs) {
if(H5O_alloc_msgs(oh, (size_t)0) < 0)
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "can't allocate more space for messages")
} /* end if */
/* Get message # for new message */
new_null_msg = oh->nmesgs++;
/* Initialize new null message */
oh->mesg[new_null_msg].type = H5O_MSG_NULL;
oh->mesg[new_null_msg].dirty = TRUE;
oh->mesg[new_null_msg].native = NULL;
oh->mesg[new_null_msg].raw = old_raw;
oh->mesg[new_null_msg].raw_size = old_raw_size;
oh->mesg[new_null_msg].chunkno = old_chunkno;
} /* end else */
/* Indicate that we packed messages */
packed_msg = TRUE;
/* Break out of loop */
/* (If it's possible to move messge to even ealier chunk
* we'll get it on the next pass - QAK)
*/
break;
} /* end if */
} /* end for */
/* If we packed messages, get out of loop and start over */
/* (Don't know if this has any benefit one way or the other -QAK) */
if(packed_msg)
break;
} /* end else */
} /* end for */
/* If we did any packing, remember that */
if(packed_msg)
did_packing = TRUE;
} while(packed_msg);
/* Set return value */
ret_value = did_packing;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5O_move_msgs_forward() */
/*-------------------------------------------------------------------------
*
* Function: H5O_merge_null
*
* Purpose: Merge neighboring null messages in an object header
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Oct 10 2005
*
*-------------------------------------------------------------------------
*/
static htri_t
H5O_merge_null(H5F_t *f, H5O_t *oh)
{
hbool_t merged_msg; /* Flag to indicate that messages were merged */
hbool_t did_merging = FALSE; /* Whether any messages were merged */
htri_t ret_value; /* Return value */
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5O_merge_null)
/* check args */
HDassert(oh != NULL);
/* Loop until no messages merged */
/* (Double loop is not very efficient, but it would be some extra work to add
* a list of messages to each chunk -QAK)
*/
do {
H5O_mesg_t *curr_msg; /* Pointer to current message to operate on */
unsigned u; /* Local index variable */
/* Reset merged messages flag */
merged_msg = FALSE;
/* Scan messages for adjacent null messages & merge them */
for(u = 0, curr_msg = &oh->mesg[0]; u < oh->nmesgs; u++, curr_msg++) {
if(H5O_NULL_ID == curr_msg->type->id) {
H5O_mesg_t *curr_msg2; /* Pointer to current message to operate on */
unsigned v; /* Local index variable */
/* Loop over messages again, looking for null message in same chunk */
for(v = 0, curr_msg2 = &oh->mesg[0]; v < oh->nmesgs; v++, curr_msg2++) {
if(u != v && H5O_NULL_ID == curr_msg2->type->id && curr_msg->chunkno == curr_msg2->chunkno) {
/* Check for second message after first message */
if((curr_msg->raw + curr_msg->raw_size) == (curr_msg2->raw - H5O_SIZEOF_MSGHDR(f))) {
/* Extend first null message length to cover second null message */
curr_msg->raw_size += (H5O_SIZEOF_MSGHDR(f) + curr_msg2->raw_size);
/* Message has been merged */
merged_msg = TRUE;
} /* end if */
/* Check for second message befre first message */
else if((curr_msg->raw - H5O_SIZEOF_MSGHDR(f)) == (curr_msg2->raw + curr_msg2->raw_size)) {
/* Adjust first message address and extend length to cover second message */
curr_msg->raw -= (H5O_SIZEOF_MSGHDR(f) + curr_msg2->raw_size);
curr_msg->raw_size += (H5O_SIZEOF_MSGHDR(f) + curr_msg2->raw_size);
/* Message has been merged */
merged_msg = TRUE;
} /* end if */
/* Second message has been merged, delete it */
if(merged_msg) {
/* Release any information/memory for second message */
H5O_free_mesg(curr_msg2);
/* Mark first message as dirty */
curr_msg->dirty = TRUE;
/* Remove second message from list of messages */
if(v < (oh->nmesgs - 1))
HDmemmove(&oh->mesg[v], &oh->mesg[v + 1], ((oh->nmesgs - 1) - v) * sizeof(H5O_mesg_t));
/* Decrement # of messages */
/* (Don't bother reducing size of message array for now -QAK) */
oh->nmesgs--;
/* Get out of loop */
break;
} /* end if */
} /* end if */
} /* end for */
/* Get out of loop if we merged messages */
if(merged_msg)
break;
} /* end if */
} /* end for */
/* If we did any merging, remember that */
if(merged_msg)
did_merging = TRUE;
} while(merged_msg);
/* Set return value */
ret_value = did_merging;
FUNC_LEAVE_NOAPI(ret_value)
} /* H5O_merge_null() */
/*-------------------------------------------------------------------------
*
* Function: H5O_remove_empty_chunks
*
* Purpose: Attempt to eliminate empty chunks from object header.
*
* This examines a chunk to see if it's empty
* and removes it (and the continuation message that points to it)
* from the object header.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Oct 17 2005
*
*-------------------------------------------------------------------------
*/
static htri_t
H5O_remove_empty_chunks(H5F_t *f, H5O_t *oh, hid_t dxpl_id)
{
hbool_t deleted_chunk; /* Whether to a chunk was deleted */
hbool_t did_deleting = FALSE; /* Whether any chunks were deleted */
htri_t ret_value; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_remove_empty_chunks)
/* check args */
HDassert(oh != NULL);
/* Loop until no chunks are freed */
do {
H5O_mesg_t *null_msg; /* Pointer to null message found */
H5O_mesg_t *cont_msg; /* Pointer to continuation message found */
unsigned u, v; /* Local index variables */
/* Reset 'chunk deleted' flag */
deleted_chunk = FALSE;
/* Scan messages for null messages that fill an entire chunk */
for(u = 0, null_msg = &oh->mesg[0]; u < oh->nmesgs; u++, null_msg++) {
/* If a null message takes up an entire object header chunk (and
* its not the "base" chunk), delete that chunk from object header
*/
if(H5O_NULL_ID == null_msg->type->id && null_msg->chunkno > 0 &&
(H5O_SIZEOF_MSGHDR(f) + null_msg->raw_size) == oh->chunk[null_msg->chunkno].size) {
H5O_mesg_t *curr_msg; /* Pointer to current message to operate on */
unsigned null_msg_no; /* Message # for null message */
unsigned deleted_chunkno; /* Chunk # to delete */
/* Locate continuation message that points to chunk */
for(v = 0, cont_msg = &oh->mesg[0]; v < oh->nmesgs; v++, cont_msg++) {
if(H5O_CONT_ID == cont_msg->type->id) {
/* Decode current continuation message if necessary */
if(NULL == cont_msg->native) {
HDassert(H5O_MSG_CONT->decode);
cont_msg->native = (H5O_MSG_CONT->decode) (f, dxpl_id, cont_msg->raw);
if(NULL == cont_msg->native)
HGOTO_ERROR(H5E_OHDR, H5E_CANTDECODE, FAIL, "unable to decode message")
} /* end if */
/* Check for correct chunk to delete */
if(oh->chunk[null_msg->chunkno].addr == ((H5O_cont_t *)(cont_msg->native))->addr)
break;
} /* end if */
} /* end for */
/* Must be a continuation message that points to chunk containing null message */
HDassert(v < oh->nmesgs);
HDassert(cont_msg);
/* Initialize information about null message */
null_msg_no = u;
deleted_chunkno = null_msg->chunkno;
/*
* Convert continuation message into a null message
*/
/* Free space for chunk referred to in the file from the continuation message */
if(H5O_delete_mesg(f, dxpl_id, cont_msg, TRUE) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTDELETE, H5O_ITER_ERROR, "unable to delete file space for object header message")
/* Free any native information */
H5O_free_mesg(cont_msg);
/* Change message type to nil and zero it */
cont_msg->type = H5O_MSG_NULL;
HDmemset(cont_msg->raw, 0, cont_msg->raw_size);
/* Indicate that the continuation message was modified */
cont_msg->dirty = TRUE;
/*
* Remove chunk from object header's data structure
*/
/* Free memory for chunk image */
H5FL_BLK_FREE(chunk_image, oh->chunk[null_msg->chunkno].image);
/* Remove chunk from list of chunks */
if(null_msg->chunkno < (oh->nchunks - 1))
HDmemmove(&oh->chunk[null_msg->chunkno], &oh->chunk[null_msg->chunkno + 1], ((oh->nchunks - 1) - null_msg->chunkno) * sizeof(H5O_chunk_t));
/* Decrement # of chunks */
/* (Don't bother reducing size of chunk array for now -QAK) */
oh->nchunks--;
/*
* Delete null message (in empty chunk that was be freed) from list of messages
*/
/* Release any information/memory for message */
H5O_free_mesg(null_msg);
/* Remove null message from list of messages */
if(null_msg_no < (oh->nmesgs - 1))
HDmemmove(&oh->mesg[null_msg_no], &oh->mesg[null_msg_no + 1], ((oh->nmesgs - 1) - null_msg_no) * sizeof(H5O_mesg_t));
/* Decrement # of messages */
/* (Don't bother reducing size of message array for now -QAK) */
oh->nmesgs--;
/* Adjust chunk # for messages in chunks after deleted chunk */
for(u = 0, curr_msg = &oh->mesg[0]; u < oh->nmesgs; u++, curr_msg++) {
HDassert(curr_msg->chunkno != deleted_chunkno);
if(curr_msg->chunkno > deleted_chunkno)
curr_msg->chunkno--;
} /* end for */
/* Found chunk to delete */
deleted_chunk = TRUE;
break;
} /* end if */
} /* end for */
/* If we deleted any chunks, remember that */
if(deleted_chunk)
did_deleting = TRUE;
} while(deleted_chunk);
/* Set return value */
ret_value = did_deleting;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5O_remove_empty_chunks() */
/*-------------------------------------------------------------------------
*
* Function: H5O_condense_header
*
* Purpose: Attempt to eliminate empty chunks from object header.
*
* Currently, this just examines a chunk to see if it's empty
* and removes it from the object header. It's possible that
* a more sophiticated algorithm would repack messages from
* one chunk to another.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Oct 4 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O_condense_header(H5F_t *f, H5O_t *oh, hid_t dxpl_id)
{
hbool_t rescan_header; /* Whether to rescan header */
htri_t result; /* Result from packing/merging/etc */
herr_t ret_value = SUCCEED; /* return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_condense_header)
/* check args */
HDassert(oh != NULL);
/* Loop until no changed to the object header messages & chunks */
do {
/* Reset 'rescan chunks' flag */
rescan_header = FALSE;
/* Scan for messages that can be moved earlier in chunks */
result = H5O_move_msgs_forward(f, oh, dxpl_id);
if(result < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTPACK, FAIL, "can't move header messages forward")
if(result > 0)
rescan_header = TRUE;
/* Scan for adjacent null messages & merge them */
result = H5O_merge_null(f, oh);
if(result < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTPACK, FAIL, "can't pack null header messages")
if(result > 0)
rescan_header = TRUE;
/* Scan for empty chunks to remove */
result = H5O_remove_empty_chunks(f, oh, dxpl_id);
if(result < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTPACK, FAIL, "can't remove empty chunk")
if(result > 0)
rescan_header = TRUE;
} while(rescan_header);
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5O_condense_header() */
/*-------------------------------------------------------------------------
*
* Function: H5O_alloc_extend_chunk
*
* Purpose: Attempt to extend a chunk that is allocated on disk.
*
* If the extension is successful, and if the last message
* of the chunk is the null message, then that message will
* be extended with the chunk. Otherwise a new null message
* is created.
*
* f is the file in which the chunk will be written. It is
* included to ensure that there is enough space to extend
* this chunk.
*
* Return: TRUE: The chunk has been extended, and *msg_idx
* contains the message index for null message
* which is large enough to hold size bytes.
*
* FALSE: The chunk cannot be extended, and *msg_idx
* is undefined.
*
* FAIL: Some internal error has been detected.
*
* Programmer: John Mainzer -- 8/16/05
*
*-------------------------------------------------------------------------
*/
static htri_t
H5O_alloc_extend_chunk(H5F_t *f,
H5O_t *oh,
unsigned chunkno,
size_t size,
unsigned * msg_idx)
{
size_t delta; /* Change in chunk's size */
size_t aligned_size = H5O_ALIGN(size);
uint8_t *old_image; /* Old address of chunk's image in memory */
size_t old_size; /* Old size of chunk */
htri_t tri_result; /* Result from checking if chunk can be extended */
int extend_msg = -1;/* Index of null message to extend */
unsigned u; /* Local index variable */
htri_t ret_value = TRUE; /* return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_alloc_extend_chunk)
/* check args */
HDassert(f != NULL);
HDassert(oh != NULL);
HDassert(chunkno < oh->nchunks);
HDassert(size > 0);
HDassert(msg_idx != NULL);
if(!H5F_addr_defined(oh->chunk[chunkno].addr))
HGOTO_ERROR(H5E_OHDR, H5E_NOSPACE, FAIL, "chunk isn't on disk")
/* Test to see if the specified chunk ends with a null messages.
* If successful, set the index of the the null message in extend_msg.
*/
for(u = 0; u < oh->nmesgs; u++) {
/* Check for null message at end of proper chunk */
if(oh->mesg[u].chunkno == chunkno && H5O_NULL_ID == oh->mesg[u].type->id &&
(oh->mesg[u].raw + oh->mesg[u].raw_size == oh->chunk[chunkno].image + oh->chunk[chunkno].size)) {
extend_msg = u;
break;
} /* end if */
} /* end for */
/* If we can extend an existing null message, adjust the delta appropriately */
if(extend_msg >= 0)
delta = MAX(H5O_MIN_SIZE, aligned_size - oh->mesg[extend_msg].raw_size);
else
delta = MAX(H5O_MIN_SIZE, aligned_size + H5O_SIZEOF_MSGHDR(f));
delta = H5O_ALIGN(delta);
/* determine whether the chunk can be extended */
tri_result = H5MF_can_extend(f, H5FD_MEM_OHDR, oh->chunk[chunkno].addr,
(hsize_t)(oh->chunk[chunkno].size), (hsize_t)delta);
if(tri_result == FALSE) { /* can't extend -- we are done */
HGOTO_DONE(FALSE);
} else if(tri_result != TRUE) { /* system error */
HGOTO_ERROR(H5E_RESOURCE, H5E_SYSTEM, FAIL, "can't tell if we can extend chunk")
}
/* If we get this far, we should be able to extend the chunk */
if(H5MF_extend(f, H5FD_MEM_OHDR, oh->chunk[chunkno].addr, (hsize_t)(oh->chunk[chunkno].size), (hsize_t)delta) < 0 )
HGOTO_ERROR(H5E_RESOURCE, H5E_SYSTEM, FAIL, "can't extend chunk")
/* If we can extend an existing null message, take take of that */
if(extend_msg >= 0) {
/* Adjust message size of existing null message */
oh->mesg[extend_msg].dirty = TRUE;
oh->mesg[extend_msg].raw_size += delta;
} /* end if */
/* Create new null message for end of chunk */
else {
/* Create a new null message */
if(oh->nmesgs >= oh->alloc_nmesgs) {
if(H5O_alloc_msgs(oh, (size_t)0) < 0)
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "can't allocate more space for messages")
} /* end if */
/* Set extension message */
extend_msg = oh->nmesgs++;
/* Initialize new null message */
oh->mesg[extend_msg].type = H5O_MSG_NULL;
oh->mesg[extend_msg].dirty = TRUE;
oh->mesg[extend_msg].native = NULL;
oh->mesg[extend_msg].raw = oh->chunk[chunkno].image +
oh->chunk[chunkno].size + H5O_SIZEOF_MSGHDR(f);
oh->mesg[extend_msg].raw_size = delta - H5O_SIZEOF_MSGHDR(f);
oh->mesg[extend_msg].chunkno = chunkno;
} /* end else */
/* Allocate more memory space for chunk's image */
old_image = oh->chunk[chunkno].image;
old_size = oh->chunk[chunkno].size;
oh->chunk[chunkno].size += delta;
oh->chunk[chunkno].image = H5FL_BLK_REALLOC(chunk_image, old_image, oh->chunk[chunkno].size);
oh->chunk[chunkno].dirty = TRUE;
if(NULL == oh->chunk[chunkno].image)
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
/* Wipe new space for chunk */
HDmemset(oh->chunk[chunkno].image + old_size, 0, oh->chunk[chunkno].size - old_size);
/* Spin through existing messages, adjusting them */
for(u = 0; u < oh->nmesgs; u++) {
/* Adjust raw addresses for messages in this chunk to reflect to 'image' address */
if(oh->mesg[u].chunkno == chunkno)
oh->mesg[u].raw = oh->chunk[chunkno].image + (oh->mesg[u].raw - old_image);
/* Find continuation message which points to this chunk and adjust chunk's size */
/* (Chunk 0 doesn't have a continuation message that points to it and
* it's size is directly encoded in the object header) */
if(chunkno > 0 && (H5O_CONT_ID == oh->mesg[u].type->id) &&
(((H5O_cont_t *)(oh->mesg[u].native))->chunkno == chunkno)) {
/* Adjust size of continuation message */
HDassert(((H5O_cont_t *)(oh->mesg[u].native))->size == old_size);
((H5O_cont_t *)(oh->mesg[u].native))->size = oh->chunk[chunkno].size;
/* Flag continuation message as dirty */
oh->mesg[u].dirty = TRUE;
} /* end if */
} /* end for */
/* Set return value */
*msg_idx = extend_msg;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5O_alloc_extend_chunk() */
/*-------------------------------------------------------------------------
* Function: H5O_alloc_new_chunk
*
* Purpose: Allocates a new chunk for the object header, including
* file space.
*
* One of the other chunks will get an object continuation
* message. If there isn't room in any other chunk for the
* object continuation message, then some message from
* another chunk is moved into this chunk to make room.
*
* SIZE need not be aligned.
*
* Return: Success: Index number of the null message for the
* new chunk. The null message will be at
* least SIZE bytes not counting the message
* ID or size fields.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 7 1997
*
*-------------------------------------------------------------------------
*/
static unsigned
H5O_alloc_new_chunk(H5F_t *f,
hid_t dxpl_id,
H5O_t *oh,
size_t size)
{
size_t cont_size; /*continuation message size */
int found_null = (-1); /*best fit null message */
int found_attr = (-1); /*best fit attribute message */
int found_link = (-1); /*best fit link message */
int found_other = (-1); /*best fit other message */
unsigned idx; /*message number */
uint8_t *p = NULL; /*ptr into new chunk */
H5O_cont_t *cont = NULL; /*native continuation message */
int chunkno;
unsigned u;
haddr_t new_chunk_addr;
unsigned ret_value; /*return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_alloc_new_chunk)
/* check args */
HDassert(oh);
HDassert(size > 0);
size = H5O_ALIGN(size);
/*
* Find the smallest null message that will hold an object
* continuation message. Failing that, find the smallest message
* that could be moved to make room for the continuation message.
* Don't ever move continuation message from one chunk to another.
* Prioritize attribute and link messages moving to later chunks,
* instead of more "important" messages.
*/
cont_size = H5O_ALIGN (H5F_SIZEOF_ADDR(f) + H5F_SIZEOF_SIZE(f));
for(u = 0; u < oh->nmesgs; u++) {
int msg_id = oh->mesg[u].type->id; /* Temp. copy of message type ID */
if(H5O_NULL_ID == msg_id) {
if(cont_size == oh->mesg[u].raw_size) {
found_null = u;
break;
} else if(oh->mesg[u].raw_size >= cont_size &&
(found_null < 0 ||
oh->mesg[u].raw_size < oh->mesg[found_null].raw_size)) {
found_null = u;
}
} else if(H5O_CONT_ID == msg_id) {
/*don't consider continuation messages */
} else if(H5O_ATTR_ID == msg_id) {
if(oh->mesg[u].raw_size >= cont_size &&
(found_attr < 0 ||
oh->mesg[u].raw_size < oh->mesg[found_attr].raw_size))
found_attr = u;
#ifdef H5_GROUP_REVISION
} else if(H5O_LINK_ID == msg_id) {
if(oh->mesg[u].raw_size >= cont_size &&
(found_link < 0 ||
oh->mesg[u].raw_size < oh->mesg[found_link].raw_size))
found_link = u;
#endif /* H5_GROUP_REVISION */
} else {
if(oh->mesg[u].raw_size >= cont_size &&
(found_other < 0 ||
oh->mesg[u].raw_size < oh->mesg[found_other].raw_size))
found_other = u;
} /* end else */
} /* end for */
HDassert(found_null >= 0 || found_attr >= 0 || found_link >= 0 || found_other >= 0);
/*
* If we must move some other message to make room for the null
* message, then make sure the new chunk has enough room for that
* other message.
*
* Move attributes first, then link messages, then other messages.
*
*/
if(found_null < 0) {
if(found_attr >= 0)
found_other = found_attr;
else if(found_link >= 0)
found_other = found_link;
HDassert(found_other >= 0);
size += H5O_SIZEOF_MSGHDR(f) + oh->mesg[found_other].raw_size;
} /* end if */
/*
* The total chunk size must include the requested space plus enough
* for the message header. This must be at least some minimum and a
* multiple of the alignment size.
*/
size = MAX(H5O_MIN_SIZE, size + H5O_SIZEOF_MSGHDR(f));
HDassert(size == H5O_ALIGN (size));
/* allocate space in file to hold the new chunk */
new_chunk_addr = H5MF_alloc(f, H5FD_MEM_OHDR, dxpl_id, (hsize_t)size);
if(HADDR_UNDEF == new_chunk_addr)
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, UFAIL, "unable to allocate space for new chunk")
/*
* Create the new chunk giving it a file address.
*/
if(oh->nchunks >= oh->alloc_nchunks) {
unsigned na = oh->alloc_nchunks + H5O_NCHUNKS;
H5O_chunk_t *x = H5FL_SEQ_REALLOC (H5O_chunk_t, oh->chunk, (size_t)na);
if(!x)
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, UFAIL, "memory allocation failed")
oh->alloc_nchunks = na;
oh->chunk = x;
} /* end if */
chunkno = oh->nchunks++;
oh->chunk[chunkno].dirty = TRUE;
oh->chunk[chunkno].addr = new_chunk_addr;
oh->chunk[chunkno].size = size;
if (NULL==(oh->chunk[chunkno].image = p = H5FL_BLK_CALLOC(chunk_image,size)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, UFAIL, "memory allocation failed")
/*
* Make sure we have enough space for all possible new messages
* that could be generated below.
*/
if(oh->nmesgs + 3 > oh->alloc_nmesgs) {
if(H5O_alloc_msgs(oh, (size_t)3) < 0)
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, UFAIL, "can't allocate more space for messages")
} /* end if */
/*
* Describe the messages of the new chunk.
*/
if(found_null < 0) {
found_null = u = oh->nmesgs++;
oh->mesg[u].type = H5O_MSG_NULL;
oh->mesg[u].dirty = TRUE;
oh->mesg[u].native = NULL;
oh->mesg[u].raw = oh->mesg[found_other].raw;
oh->mesg[u].raw_size = oh->mesg[found_other].raw_size;
oh->mesg[u].chunkno = oh->mesg[found_other].chunkno;
oh->mesg[found_other].dirty = TRUE;
/* Copy the message to the new location */
HDmemcpy(p + H5O_SIZEOF_MSGHDR(f),
oh->mesg[found_other].raw,
oh->mesg[found_other].raw_size);
oh->mesg[found_other].raw = p + H5O_SIZEOF_MSGHDR(f);
oh->mesg[found_other].chunkno = chunkno;
p += H5O_SIZEOF_MSGHDR(f) + oh->mesg[found_other].raw_size;
size -= H5O_SIZEOF_MSGHDR(f) + oh->mesg[found_other].raw_size;
} /* end if */
idx = oh->nmesgs++;
oh->mesg[idx].type = H5O_MSG_NULL;
oh->mesg[idx].dirty = TRUE;
oh->mesg[idx].native = NULL;
oh->mesg[idx].raw = p + H5O_SIZEOF_MSGHDR(f);
oh->mesg[idx].raw_size = size - H5O_SIZEOF_MSGHDR(f);
oh->mesg[idx].chunkno = chunkno;
/*
* If the null message that will receive the continuation message
* is larger than the continuation message, then split it into
* two null messages.
*/
if(oh->mesg[found_null].raw_size > cont_size) {
u = oh->nmesgs++;
oh->mesg[u].type = H5O_MSG_NULL;
oh->mesg[u].dirty = TRUE;
oh->mesg[u].native = NULL;
oh->mesg[u].raw = oh->mesg[found_null].raw +
cont_size +
H5O_SIZEOF_MSGHDR(f);
oh->mesg[u].raw_size = oh->mesg[found_null].raw_size -
(cont_size + H5O_SIZEOF_MSGHDR(f));
oh->mesg[u].chunkno = oh->mesg[found_null].chunkno;
oh->mesg[found_null].dirty = TRUE;
oh->mesg[found_null].raw_size = cont_size;
} /* end if */
/*
* Initialize the continuation message.
*/
oh->mesg[found_null].type = H5O_MSG_CONT;
oh->mesg[found_null].dirty = TRUE;
if (NULL==(cont = H5FL_MALLOC(H5O_cont_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, UFAIL, "memory allocation failed")
cont->addr = oh->chunk[chunkno].addr;
cont->size = oh->chunk[chunkno].size;
cont->chunkno = chunkno;
oh->mesg[found_null].native = cont;
/* Set return value */
ret_value = idx;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5O_alloc_new_chunk() */
/*-------------------------------------------------------------------------
* Function: H5O_alloc
*
* Purpose: Allocate enough space in the object header for this message.
*
* Return: Success: Index of message
*
* Failure: Negative
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 6 1997
*
*-------------------------------------------------------------------------
*/
static unsigned
H5O_alloc(H5F_t *f,
hid_t dxpl_id,
H5O_t *oh,
const H5O_msg_class_t *type,
size_t size,
unsigned * oh_flags_ptr)
{
H5O_mesg_t *msg; /* Pointer to newly allocated message */
size_t aligned_size = H5O_ALIGN(size);
unsigned idx; /* Index of message which fits allocation */
unsigned ret_value; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_alloc)
/* check args */
HDassert(oh);
HDassert(type);
HDassert(oh_flags_ptr);
/* look for a null message which is large enough */
for(idx = 0; idx < oh->nmesgs; idx++) {
if(H5O_NULL_ID == oh->mesg[idx].type->id &&
oh->mesg[idx].raw_size >= aligned_size)
break;
} /* end for */
#ifdef LATER
/*
* Perhaps if we join adjacent null messages we could make one
* large enough... we leave this as an exercise for future
* programmers :-) This isn't a high priority because when an
* object header is read from disk the null messages are combined
* anyway.
*/
#endif
/* if we didn't find one, then allocate more header space */
if(idx >= oh->nmesgs) {
unsigned chunkno;
/* check to see if we can extend one of the chunks. If we can,
* do so. Otherwise, we will have to allocate a new chunk.
*
* Note that in this new version of this function, all chunks
* must have file space allocated to them.
*/
for(chunkno = 0; chunkno < oh->nchunks; chunkno++) {
htri_t tri_result;
HDassert(H5F_addr_defined(oh->chunk[chunkno].addr));
tri_result = H5O_alloc_extend_chunk(f, oh, chunkno, size, &idx);
if(tri_result == TRUE)
break;
else if(tri_result == FALSE)
idx = UFAIL;
else
HGOTO_ERROR(H5E_OHDR, H5E_SYSTEM, UFAIL, "H5O_alloc_extend_chunk failed unexpectedly")
} /* end for */
/* if idx is still UFAIL, we were not able to extend a chunk.
* Create a new one.
*/
if(idx == UFAIL)
if((idx = H5O_alloc_new_chunk(f, dxpl_id, oh, size)) == UFAIL)
HGOTO_ERROR(H5E_OHDR, H5E_NOSPACE, UFAIL, "unable to create a new object header data chunk")
} /* end if */
/* Set pointer to newly allocated message */
msg = &(oh->mesg[idx]);
/* do we need to split the null message? */
if(msg->raw_size > aligned_size) {
H5O_mesg_t *null_msg; /* Pointer to null message */
size_t mesg_size = aligned_size + H5O_SIZEOF_MSGHDR(f); /* Total size of newly allocated message */
HDassert(msg->raw_size - aligned_size >= H5O_SIZEOF_MSGHDR(f));
/* Check if we need to extend message table */
if(oh->nmesgs >= oh->alloc_nmesgs) {
if(H5O_alloc_msgs(oh, (size_t)0) < 0)
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, UFAIL, "can't allocate more space for messages")
/* "Retarget" local 'msg' pointer into newly allocated array of messages */
msg = &oh->mesg[idx];
} /* end if */
null_msg = &(oh->mesg[oh->nmesgs++]);
null_msg->type = H5O_MSG_NULL;
null_msg->dirty = TRUE;
null_msg->native = NULL;
null_msg->raw = msg->raw + mesg_size;
null_msg->raw_size = msg->raw_size - mesg_size;
null_msg->chunkno = msg->chunkno;
msg->raw_size = aligned_size;
} /* end if */
/* initialize the new message */
msg->type = type;
msg->dirty = TRUE;
msg->native = NULL;
*oh_flags_ptr |= H5AC__DIRTIED_FLAG;
/* Set return value */
ret_value = idx;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5O_alloc() */
#ifdef NOT_YET
/*-------------------------------------------------------------------------
* Function: H5O_share
*
* Purpose: Writes a message to the global heap.
*
* Return: Success: Non-negative, and HOBJ describes the global heap
* object.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* Thursday, April 2, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O_share (H5F_t *f, hid_t dxpl_id, const H5O_msg_class_t *type, const void *mesg,
H5HG_t *hobj/*out*/)
{
size_t size;
void *buf = NULL;
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_share);
/* Check args */
assert (f);
assert (type);
assert (mesg);
assert (hobj);
/* Encode the message put it in the global heap */
if ((size = (type->raw_size)(f, mesg))>0) {
if (NULL==(buf = H5MM_malloc (size)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed");
if ((type->encode)(f, buf, mesg) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTENCODE, FAIL, "unable to encode message");
if (H5HG_insert (f, dxpl_id, size, buf, hobj) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to store message in global heap");
}
done:
if(buf)
H5MM_xfree (buf);
FUNC_LEAVE_NOAPI(ret_value);
}
#endif /* NOT_YET */
/*-------------------------------------------------------------------------
* Function: H5O_raw_size
*
* Purpose: Call the 'raw_size' method for a
* particular class of object header.
*
* Return: Size of message on success, 0 on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Feb 13 2003
*
*-------------------------------------------------------------------------
*/
size_t
H5O_raw_size(unsigned type_id, const H5F_t *f, const void *mesg)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
size_t ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5O_raw_size,0)
/* Check args */
HDassert(type_id < NELMTS(H5O_msg_class_g));
type=H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
HDassert(type);
HDassert(type->raw_size);
HDassert(f);
HDassert(mesg);
/* Compute the raw data size for the mesg */
if ((ret_value = (type->raw_size)(f, mesg))==0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOUNT, 0, "unable to determine size of message")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_raw_size() */
/*-------------------------------------------------------------------------
* Function: H5O_mesg_size
*
* Purpose: Calculate the final size of an encoded message in an object
* header.
*
* Return: Size of message on success, 0 on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Sep 6 2005
*
*-------------------------------------------------------------------------
*/
size_t
H5O_mesg_size(unsigned type_id, const H5F_t *f, const void *mesg)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
size_t ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5O_mesg_size,0)
/* Check args */
HDassert(type_id < NELMTS(H5O_msg_class_g));
type=H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
HDassert(type);
HDassert(type->raw_size);
HDassert(f);
HDassert(mesg);
/* Compute the raw data size for the mesg */
if((ret_value = (type->raw_size)(f, mesg)) == 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOUNT, 0, "unable to determine size of message")
/* Adjust size for alignment, if necessary */
ret_value = H5O_ALIGN(ret_value);
/* Add space for message header */
ret_value += H5O_SIZEOF_MSGHDR(f);
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_mesg_size() */
/*-------------------------------------------------------------------------
* Function: H5O_get_share
*
* Purpose: Call the 'get_share' method for a
* particular class of object header.
*
* Return: Success: Non-negative, and SHARE describes the shared
* object.
*
* Failure: Negative
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Oct 2 2003
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_get_share(unsigned type_id, H5F_t *f, const void *mesg, H5O_shared_t *share)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
herr_t ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5O_get_share,FAIL)
/* Check args */
HDassert(type_id < NELMTS(H5O_msg_class_g));
type = H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
HDassert(type);
HDassert(type->get_share);
HDassert(f);
HDassert(mesg);
HDassert(share);
/* Compute the raw data size for the mesg */
if((ret_value = (type->get_share)(f, mesg, share)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTGET, FAIL, "unable to retrieve shared message information")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_get_share() */
/*-------------------------------------------------------------------------
* Function: H5O_delete
*
* Purpose: Delete an object header from a file. This frees the file
* space used for the object header (and it's continuation blocks)
* and also walks through each header message and asks it to
* remove all the pieces of the file referenced by the header.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Mar 19 2003
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_delete(H5F_t *f, hid_t dxpl_id, haddr_t addr)
{
H5O_t *oh = NULL; /* Object header information */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5O_delete,FAIL)
/* Check args */
HDassert(f);
HDassert(H5F_addr_defined(addr));
/* Get the object header information */
if(NULL == (oh = H5AC_protect(f, dxpl_id, H5AC_OHDR, addr, NULL, NULL, H5AC_WRITE)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, FAIL, "unable to load object header")
/* Delete object */
if(H5O_delete_oh(f, dxpl_id, oh) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTDELETE, FAIL, "can't delete object from file")
done:
if(oh && H5AC_unprotect(f, dxpl_id, H5AC_OHDR, addr, oh, H5AC__DIRTIED_FLAG | H5C__DELETED_FLAG) < 0)
HDONE_ERROR(H5E_OHDR, H5E_PROTECT, FAIL, "unable to release object header")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_delete() */
/*-------------------------------------------------------------------------
* Function: H5O_delete_oh
*
* Purpose: Internal function to:
* Delete an object header from a file. This frees the file
* space used for the object header (and it's continuation blocks)
* and also walks through each header message and asks it to
* remove all the pieces of the file referenced by the header.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Mar 19 2003
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O_delete_oh(H5F_t *f, hid_t dxpl_id, H5O_t *oh)
{
H5O_mesg_t *curr_msg; /* Pointer to current message being operated on */
unsigned u;
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_delete_oh)
/* Check args */
HDassert(f);
HDassert(oh);
/* Walk through the list of object header messages, asking each one to
* delete any file space used
*/
for(u = 0, curr_msg = &oh->mesg[0]; u < oh->nmesgs; u++, curr_msg++) {
/* Free any space referred to in the file from this message */
if(H5O_delete_mesg(f, dxpl_id, curr_msg, TRUE) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTDELETE, FAIL, "unable to delete file space for object header message")
} /* end for */
/* Free main (first) object header "chunk" */
if(H5MF_xfree(f, H5FD_MEM_OHDR, dxpl_id, (oh->chunk[0].addr - H5O_SIZEOF_HDR(f)), (hsize_t)(oh->chunk[0].size + H5O_SIZEOF_HDR(f))) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTFREE, FAIL, "unable to free object header")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_delete_oh() */
/*-------------------------------------------------------------------------
* Function: H5O_delete_mesg
*
* Purpose: Internal function to:
* Delete an object header message from a file. This frees the file
* space used for anything referred to in the object header message.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* September 26 2003
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O_delete_mesg(H5F_t *f, hid_t dxpl_id, H5O_mesg_t *mesg, hbool_t adj_link)
{
const H5O_msg_class_t *type; /* Type of object to free */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_delete_mesg)
/* Check args */
HDassert(f);
HDassert(mesg);
/* Get the message to free's type */
if(mesg->flags & H5O_FLAG_SHARED)
type = H5O_MSG_SHARED;
else
type = mesg->type;
/* Check if there is a file space deletion callback for this type of message */
if(type->del) {
/*
* Decode the message if necessary.
*/
if(NULL == mesg->native) {
HDassert(type->decode);
mesg->native = (type->decode) (f, dxpl_id, mesg->raw);
if(NULL == mesg->native)
HGOTO_ERROR(H5E_OHDR, H5E_CANTDECODE, FAIL, "unable to decode message")
} /* end if */
if((type->del)(f, dxpl_id, mesg->native, adj_link) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTDELETE, FAIL, "unable to delete file space for object header message")
} /* end if */
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_delete_msg() */
/*-------------------------------------------------------------------------
* Function: H5O_get_info
*
* Purpose: Retrieve information about an object header
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Oct 7 2003
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_get_info(H5O_loc_t *loc, H5O_stat_t *ostat, hid_t dxpl_id)
{
H5O_t *oh = NULL; /* Object header information */
H5O_mesg_t *curr_msg; /* Pointer to current message being operated on */
hsize_t total_size; /* Total amount of space used in file */
hsize_t free_space; /* Free space in object header */
unsigned u; /* Local index variable */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5O_get_info,FAIL)
/* Check args */
HDassert(loc);
HDassert(ostat);
/* Get the object header information */
if(NULL == (oh = H5AC_protect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, NULL, NULL, H5AC_READ)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, FAIL, "unable to load object header")
/* Iterate over all the messages, accumulating the total size & free space */
total_size = H5O_SIZEOF_HDR(loc->file);
free_space = 0;
for(u = 0, curr_msg = &oh->mesg[0]; u < oh->nmesgs; u++, curr_msg++) {
/* Accumulate the size for this message */
total_size += H5O_SIZEOF_MSGHDR(loc->file) + curr_msg->raw_size;
/* Check for this message being free space */
if(H5O_NULL_ID == curr_msg->type->id)
free_space+= H5O_SIZEOF_MSGHDR(loc->file) + curr_msg->raw_size;
} /* end for */
/* Set the information for this object header */
ostat->size = total_size;
ostat->free = free_space;
ostat->nmesgs = oh->nmesgs;
ostat->nchunks = oh->nchunks;
done:
if(oh && H5AC_unprotect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, oh, H5AC__NO_FLAGS_SET) < 0)
HDONE_ERROR(H5E_OHDR, H5E_PROTECT, FAIL, "unable to release object header")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_get_info() */
/*-------------------------------------------------------------------------
* Function: H5O_encode
*
* Purpose: Encode an object(data type and simple data space only)
* description into a buffer.
*
* Return: Success: Non-negative
*
* Failure: Negative
*
* Programmer: Raymond Lu
* slu@ncsa.uiuc.edu
* July 13, 2004
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_encode(H5F_t *f, unsigned char *buf, void *obj, unsigned type_id)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5O_encode,FAIL);
/* check args */
assert(type_id < NELMTS(H5O_msg_class_g));
type=H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
assert(type);
/* Encode */
if ((type->encode)(f, buf, obj) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTENCODE, FAIL, "unable to encode message");
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5O_decode
*
* Purpose: Decode a binary object(data type and data space only)
* description and return a new object handle.
*
* Return: Success: Pointer to object(data type or space)
*
* Failure: NULL
*
* Programmer: Raymond Lu
* slu@ncsa.uiuc.edu
* July 14, 2004
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
void*
H5O_decode(H5F_t *f, const unsigned char *buf, unsigned type_id)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
void *ret_value=NULL; /* Return value */
FUNC_ENTER_NOAPI(H5O_decode,NULL);
/* check args */
assert(type_id < NELMTS(H5O_msg_class_g));
type=H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
assert(type);
/* decode */
if((ret_value = (type->decode)(f, 0, buf))==NULL)
HGOTO_ERROR(H5E_OHDR, H5E_CANTDECODE, NULL, "unable to decode message");
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5O_iterate
*
* Purpose: Iterate through object headers of a certain type.
*
* Return: Returns a negative value if something is wrong, the return
* value of the last operator if it was non-zero, or zero if all
* object headers were processed.
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Nov 19 2004
*
* Description:
* This function interates over the object headers of an object
* specified with 'ent' of type 'type_id'. For each object header of the
* object, the 'op_data' and some additional information (specified below) are
* passed to the 'op' function.
* The operation receives a pointer to the object header message for the
* object being iterated over ('mesg'), and the pointer to the operator data
* passed in to H5O_iterate ('op_data'). The return values from an operator
* are:
* A. Zero causes the iterator to continue, returning zero when all
* object headers of that type have been processed.
* B. Positive causes the iterator to immediately return that positive
* value, indicating short-circuit success.
* C. Negative causes the iterator to immediately return that value,
* indicating failure.
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_iterate(const H5O_loc_t *loc, unsigned type_id, H5O_operator_t app_op,
void *op_data, hid_t dxpl_id)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
H5O_mesg_operator_t op; /* Wrapper for operator */
herr_t ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5O_iterate, FAIL)
/* check args */
HDassert(loc);
HDassert(loc->file);
HDassert(H5F_addr_defined(loc->addr));
HDassert(type_id < NELMTS(H5O_msg_class_g));
type = H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
HDassert(type);
/* Call the "real" iterate routine */
op.app_op = app_op;
if((ret_value = H5O_iterate_real(loc, type, H5AC_READ, FALSE, op, op_data, dxpl_id)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_BADITER, FAIL, "unable to iterate over object header messages")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_iterate() */
/*-------------------------------------------------------------------------
* Function: H5O_iterate_real
*
* Purpose: Iterate through object headers of a certain type.
*
* Return: Returns a negative value if something is wrong, the return
* value of the last operator if it was non-zero, or zero if all
* object headers were processed.
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Sep 6 2005
*
* Description:
* This function interates over the object headers of an object
* specified with 'ent' of type 'type_id'. For each object header of the
* object, the 'op_data' and some additional information (specified below) are
* passed to the 'op' function.
* The operation receives a pointer to the object header message for the
* object being iterated over ('mesg'), and the pointer to the operator data
* passed in to H5O_iterate ('op_data'). The return values from an operator
* are:
* A. Zero causes the iterator to continue, returning zero when all
* object headers of that type have been processed.
* B. Positive causes the iterator to immediately return that positive
* value, indicating short-circuit success.
* C. Negative causes the iterator to immediately return that value,
* indicating failure.
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O_iterate_real(const H5O_loc_t *loc, const H5O_msg_class_t *type, H5AC_protect_t prot,
hbool_t internal, H5O_mesg_operator_t op, void *op_data, hid_t dxpl_id)
{
H5O_t *oh = NULL; /* Pointer to actual object header */
unsigned oh_flags = H5AC__NO_FLAGS_SET; /* Start iteration with no flags set on object header */
unsigned idx; /* Absolute index of current message in all messages */
unsigned sequence; /* Relative index of current message for messages of type */
H5O_mesg_t *idx_msg; /* Pointer to current message */
herr_t ret_value = H5O_ITER_CONT; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_iterate_real)
/* check args */
HDassert(loc);
HDassert(loc->file);
HDassert(H5F_addr_defined(loc->addr));
HDassert(type);
HDassert(op.app_op);
/* Protect the object header to iterate over */
if (NULL == (oh = H5AC_protect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, NULL, NULL, prot)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, FAIL, "unable to load object header");
/* Iterate over messages */
for(sequence = 0, idx = 0, idx_msg = &oh->mesg[0]; idx < oh->nmesgs && !ret_value; idx++, idx_msg++) {
if(type->id == idx_msg->type->id) {
/*
* Decode the message if necessary. If the message is shared then decode
* a shared message, ignoring the message type.
*/
LOAD_NATIVE(loc->file, dxpl_id, idx_msg, FAIL)
/* Check for making an "internal" (i.e. within the H5O package) callback */
if(internal) {
/* Call the "internal" iterator callback */
if((ret_value = (op.lib_op)(idx_msg, sequence, &oh_flags, op_data)) != 0)
break;
} /* end if */
else {
/* Call the iterator callback */
if((ret_value = (op.app_op)(idx_msg->native, sequence, op_data)) != 0)
break;
} /* end else */
/* Check for error from iterator */
if(ret_value < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "iterator function failed")
/* Increment sequence value for message type */
sequence++;
} /* end if */
} /* end for */
done:
if(oh) {
/* Check if object header was modified */
if(oh_flags & H5AC__DIRTIED_FLAG) {
/* Shouldn't be able to modify object header if we don't have write access */
HDassert(prot == H5AC_WRITE);
/* Try to condense object header info */
if(H5O_condense_header(loc->file, oh, dxpl_id) < 0)
HDONE_ERROR(H5E_OHDR, H5E_CANTPACK, FAIL, "can't pack object header")
H5O_touch_oh(loc->file, dxpl_id, oh, FALSE, &oh_flags);
} /* end if */
if(H5AC_unprotect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, oh, oh_flags) < 0)
HDONE_ERROR(H5E_OHDR, H5E_PROTECT, FAIL, "unable to release object header")
} /* end if */
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_iterate_real() */
/*-------------------------------------------------------------------------
* Function: H5O_obj_type
*
* Purpose: Returns the type of object pointed to by `loc'.
*
* Return: Success: An object type defined in H5Gpublic.h
* Failure: H5G_UNKNOWN
*
* Programmer: Robb Matzke
* Wednesday, November 4, 1998
*
*-------------------------------------------------------------------------
*/
H5G_obj_t
H5O_obj_type(H5O_loc_t *loc, hid_t dxpl_id)
{
H5O_t *oh = NULL; /* Object header for location */
H5G_obj_t ret_value = H5G_UNKNOWN; /* Return value */
FUNC_ENTER_NOAPI(H5O_obj_type, H5G_UNKNOWN)
/* Load the object header */
if(NULL == (oh = H5AC_protect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, NULL, NULL, H5AC_READ)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, H5G_UNKNOWN, "unable to load object header")
/* Test whether entry qualifies as a particular type of object */
if((ret_value = H5O_obj_type_real(oh)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, H5G_UNKNOWN, "unable to determine object type")
done:
if(oh && H5AC_unprotect(loc->file, dxpl_id, H5AC_OHDR, loc->addr, oh, H5AC__NO_FLAGS_SET) != SUCCEED)
HDONE_ERROR(H5E_OHDR, H5E_PROTECT, H5G_UNKNOWN, "unable to release object header")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_obj_type() */
/*-------------------------------------------------------------------------
* Function: H5O_obj_type_real
*
* Purpose: Returns the type of object pointed to by `oh'.
*
* Note: Same algorithm as H5O_obj_class()
*
* Return: Success: An object type defined in H5Gpublic.h
* Failure: H5G_UNKNOWN
*
* Programmer: Quincey Koziol
* Monday, November 21, 2005
*
*-------------------------------------------------------------------------
*/
static H5G_obj_t
H5O_obj_type_real(H5O_t *oh)
{
size_t i; /* Local index variable */
H5G_obj_t ret_value = H5G_UNKNOWN; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_obj_type_real)
/* Sanity check */
HDassert(oh);
/* Test whether entry qualifies as a particular type of object */
/* (Note: loop is in reverse order, to test specific objects first) */
for(i = NELMTS(H5O_obj_class_g); i > 0; --i) {
htri_t isa; /* Is entry a particular type? */
if((isa = (H5O_obj_class_g[i - 1]->isa)(oh)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, H5G_UNKNOWN, "unable to determine object type")
else if(isa)
HGOTO_DONE(H5O_obj_class_g[i - 1]->type)
} /* end for */
if(0 == i)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, H5G_UNKNOWN, "unable to determine object type")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_obj_type_real() */
/*-------------------------------------------------------------------------
* Function: H5O_obj_class
*
* Purpose: Returns the class of object pointed to by `oh'.
*
* Note: Same algorithm as H5O_obj_type_real()
*
* Return: Success: An object class
* Failure: NULL
*
* Programmer: Quincey Koziol
* Monday, November 21, 2005
*
*-------------------------------------------------------------------------
*/
static const H5O_obj_class_t *
H5O_obj_class(H5O_t *oh)
{
size_t i; /* Local index variable */
const H5O_obj_class_t *ret_value; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5O_obj_class)
/* Sanity check */
HDassert(oh);
/* Test whether entry qualifies as a particular type of object */
/* (Note: loop is in reverse order, to test specific objects first) */
for(i = NELMTS(H5O_obj_class_g); i > 0; --i) {
htri_t isa; /* Is entry a particular type? */
if((isa = (H5O_obj_class_g[i - 1]->isa)(oh)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, NULL, "unable to determine object type")
else if(isa)
HGOTO_DONE(H5O_obj_class_g[i - 1])
} /* end for */
if(0 == i)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, NULL, "unable to determine object type")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_obj_class() */
/*-------------------------------------------------------------------------
* Function: H5O_loc_reset
*
* Purpose: Reset a object location to an empty state
*
* Return: Success: Non-negative
* Failure: Negative
*
* Programmer: Quincey Koziol
* Monday, September 19, 2005
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_loc_reset(H5O_loc_t *loc)
{
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5O_loc_reset)
/* Check arguments */
HDassert(loc);
/* Clear the object location to an empty state */
HDmemset(loc, 0, sizeof(H5O_loc_t));
loc->addr = HADDR_UNDEF;
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5O_loc_reset() */
/*-------------------------------------------------------------------------
* Function: H5O_loc_copy
*
* Purpose: Copy object location information
*
* Return: Success: Non-negative
* Failure: Negative
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Monday, September 19, 2005
*
* Notes: 'depth' parameter determines how much of the group entry
* structure we want to copy. The values are:
* H5_COPY_SHALLOW - Copy all the field values from the source
* to the destination, but not copying objects pointed to.
* (Destination "takes ownership" of objects pointed to)
* H5_COPY_DEEP - Copy all the fields from the source to
* the destination, deep copying objects pointed to.
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_loc_copy(H5O_loc_t *dst, const H5O_loc_t *src, H5_copy_depth_t depth)
{
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5O_loc_copy)
/* Check arguments */
HDassert(src);
HDassert(dst);
HDassert(depth == H5_COPY_SHALLOW || depth == H5_COPY_DEEP);
/* Copy the top level information */
HDmemcpy(dst, src, sizeof(H5O_loc_t));
/* Deep copy the names */
if(depth == H5_COPY_DEEP) {
/* If the original entry has holding open the file, this one should
* hold it open, too.
*/
if(src->holding_file)
dst->file->nopen_objs++;
;
} else if(depth == H5_COPY_SHALLOW) {
/* Discarding 'const' qualifier OK - QAK */
H5O_loc_reset((H5O_loc_t *)src);
} /* end if */
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5O_loc_copy() */
/*-------------------------------------------------------------------------
* Function: H5O_loc_hold_file
*
* Purpose: Have this object header hold a file open until it is
* released.
*
* Return: Success: Non-negative
* Failure: Negative
*
* Programmer: James Laird
* Wednesday, August 16, 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_loc_hold_file(H5O_loc_t *loc)
{
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5O_loc_hold_file)
/* Check arguments */
HDassert(loc);
HDassert(loc->file);
/* If this location is not already holding its file open, do so. */
if(!loc->holding_file)
{
loc->file->nopen_objs++;
loc->holding_file = TRUE;
}
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5O_loc_hold_file() */
/*-------------------------------------------------------------------------
* Function: H5O_loc_free
*
* Purpose: Release resources used by this object header location.
* Not to be confused with H5O_close; this is used on
* locations that don't correspond to open objects.
*
* Return: Success: Non-negative
* Failure: Negative
*
* Programmer: James Laird
* Wednesday, August 16, 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_loc_free(H5O_loc_t *loc)
{
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI_NOINIT(H5O_loc_free)
/* Check arguments */
HDassert(loc);
/* If this location is holding its file open try to close the file. */
if(loc->holding_file)
{
loc->file->nopen_objs--;
loc->holding_file = FALSE;
if(loc->file->nopen_objs <= 0) {
if(H5F_try_close(loc->file) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, FAIL, "can't close file");
}
}
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_loc_free() */
/*-------------------------------------------------------------------------
* Function: H5O_copy_mesg_file
*
* Purpose: Copies a message to file. If MESG is is the null pointer then a null
* pointer is returned with no error.
*
* Return: Success: Ptr to the new message
*
* Failure: NULL
*
* Programmer: Peter Cao
* June 4, 2005
*
*-------------------------------------------------------------------------
*/
static void *
H5O_copy_mesg_file(const H5O_msg_class_t *type, H5F_t *file_src, void *native_src,
H5F_t *file_dst, hid_t dxpl_id, H5O_copy_t *cpy_info, void *udata)
{
void *ret_value;
FUNC_ENTER_NOAPI_NOINIT(H5O_copy_mesg_file)
/* check args */
HDassert(type);
HDassert(type->copy_file);
HDassert(file_src);
HDassert(native_src);
HDassert(file_dst);
HDassert(cpy_info);
if(NULL == (ret_value = (type->copy_file)(file_src, native_src, file_dst, dxpl_id, cpy_info, udata)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, NULL, "unable to copy object header message to file")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_copy_mesg_file() */
/*-------------------------------------------------------------------------
* Function: H5O_copy_header_real
*
* Purpose: copy header object from one location to another.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* May 30, 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O_copy_header_real(const H5O_loc_t *oloc_src, H5O_loc_t *oloc_dst /*out */,
hid_t dxpl_id, H5O_copy_t *cpy_info)
{
H5O_addr_map_t *addr_map = NULL; /* Address mapping of object copied */
H5O_t *oh_src = NULL; /* Object header for source object */
H5O_t *oh_dst = NULL; /* Object header for destination object */
unsigned chunkno = 0, mesgno = 0;
size_t hdr_size;
haddr_t addr_new = HADDR_UNDEF;
H5O_mesg_t *mesg_src; /* Message in source object header */
H5O_mesg_t *mesg_dst; /* Message in source object header */
const H5O_msg_class_t *copy_type; /* Type of message to use for copying */
const H5O_obj_class_t *obj_class = NULL; /* Type of object we are copying */
void *udata = NULL; /* User data for passing to message callbacks */
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI_NOINIT(H5O_copy_header_real)
HDassert(oloc_src);
HDassert(oloc_src->file);
HDassert(H5F_addr_defined(oloc_src->addr));
HDassert(oloc_dst->file);
HDassert(cpy_info);
/* Get source object header */
if(NULL == (oh_src = H5AC_protect(oloc_src->file, dxpl_id, H5AC_OHDR, oloc_src->addr, NULL, NULL, H5AC_READ)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, FAIL, "unable to load object header")
/* Get pointer to object class for this object */
if(NULL == (obj_class = H5O_obj_class(oh_src)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to determine object type")
/* Retrieve user data for particular type of object to copy */
if(obj_class->get_copy_file_udata &&
(NULL == (udata = (obj_class->get_copy_file_udata)())))
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to retrieve copy user data")
/* Flush any dirty messages in source object header to update the header chunks */
if(H5O_flush_msgs(oloc_src->file, oh_src) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTFLUSH, FAIL, "unable to flush object header messages")
/* get the size of the file header of the destination file */
hdr_size = H5O_SIZEOF_HDR(oloc_dst->file);
/* Allocate the destination object header and fill in header fields */
if(NULL == (oh_dst = H5FL_MALLOC(H5O_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
/* Initialize header information */
oh_dst->version = H5O_VERSION;
oh_dst->nlink = 0;
/* Initialize size of chunk array */
oh_dst->alloc_nchunks = oh_dst->nchunks = oh_src->nchunks;
/* Allocate memory for the chunk array */
if(NULL == (oh_dst->chunk = H5FL_SEQ_MALLOC(H5O_chunk_t, oh_dst->alloc_nchunks)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
/* need to allocate all the chunks for the destination before copy the chunk message
because continuation chunk message will need to know the chunk address of address of
continuation block.
*/
for(chunkno = 0; chunkno < oh_src->nchunks; chunkno++) {
size_t chunk_size = oh_src->chunk[chunkno].size;
/* '0th' chunk is preceded by object header prefix */
if(0 == chunkno) {
/* Allocate file space for the first chunk & object header prefix */
if(HADDR_UNDEF == (addr_new = H5MF_alloc(oloc_dst->file, H5FD_MEM_OHDR, dxpl_id, (hsize_t)hdr_size + chunk_size)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "file allocation failed for object header")
/* Set first chunk's address */
oh_dst->chunk[0].addr = addr_new + (hsize_t)hdr_size;
} /* end if */
else {
if(HADDR_UNDEF == (oh_dst->chunk[chunkno].addr = H5MF_alloc(oloc_dst->file, H5FD_MEM_OHDR, dxpl_id, (hsize_t)chunk_size)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "file allocation failed for object header")
} /* end else */
/* Create memory image for the new chunk */
if(NULL == (oh_dst->chunk[chunkno].image = H5FL_BLK_MALLOC(chunk_image, chunk_size)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
/* Copy the chunk image from source to destination in memory */
/* (This copies over all the messages which don't require special
* callbacks to fix them up.)
*/
HDmemcpy(oh_dst->chunk[chunkno].image, oh_src->chunk[chunkno].image, chunk_size);
/* Set dest. chunk information */
oh_dst->chunk[chunkno].dirty = TRUE;
oh_dst->chunk[chunkno].size = chunk_size;
} /* end for */
/* Initialize size of message list */
oh_dst->alloc_nmesgs = oh_dst->nmesgs = oh_src->nmesgs;
/* Allocate memory for message array */
if(NULL == (oh_dst->mesg = H5FL_SEQ_CALLOC(H5O_mesg_t, oh_dst->alloc_nmesgs)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
/* Copy basic information about messages */
HDmemcpy(oh_dst->mesg, oh_src->mesg, oh_dst->alloc_nmesgs * sizeof(H5O_mesg_t));
/* "pre copy" pass over messages, to gather information for actual message copy operation */
/* (for messages which depend on information from other messages) */
/* (also resets various destination message information) */
for(mesgno = 0; mesgno < oh_src->nmesgs; mesgno++) {
/* Set up convenience variables */
mesg_src = &(oh_src->mesg[mesgno]);
mesg_dst = &(oh_dst->mesg[mesgno]);
/* Sanity check */
HDassert(!mesg_src->dirty); /* Should be cleared by earlier call to flush messages */
/* Fix up destination message pointers */
mesg_dst->native = NULL;
mesg_dst->raw = oh_dst->chunk[mesg_dst->chunkno].image + (mesg_src->raw - oh_src->chunk[mesg_src->chunkno].image);
/* Check for shared message to operate on */
if(mesg_src->flags & H5O_FLAG_SHARED)
copy_type = H5O_MSG_SHARED;
else
copy_type = mesg_src->type;
HDassert(copy_type);
if(copy_type->pre_copy_file) {
hbool_t deleted = FALSE; /* Flag to indicate that the message should be deleted from the destination */
/*
* Decode the message if necessary. If the message is shared then do
* a shared message, ignoring the message type.
*/
if(NULL == mesg_src->native) {
/* Decode the message if necessary */
HDassert(copy_type->decode);
if(NULL == (mesg_src->native = (copy_type->decode)(oloc_src->file, dxpl_id, mesg_src->raw)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTDECODE, FAIL, "unable to decode a message")
} /* end if (NULL == mesg_src->native) */
/* Perform "pre copy" operation on messge */
if((copy_type->pre_copy_file)(oloc_src->file, mesg_src->type, mesg_src->native, &deleted, cpy_info, udata) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to perform 'pre copy' operation on message")
/* Check if the message should be deleted in the destination */
if(deleted) {
/* Change ID of destination message to NULL */
mesg_dst->type = H5O_MSG_NULL;
/* Clear message data to 0 */
HDmemset(mesg_dst->raw, 0, mesg_dst->raw_size);
/* Clear message flags */
mesg_dst->flags = 0;
/* Mark message as dirty */
mesg_dst->dirty = TRUE;
} /* end if */
} /* end if */
} /* end for */
/* "copy" pass over messages, to perform main message copying */
for(mesgno = 0; mesgno < oh_src->nmesgs; mesgno++) {
/* Set up convenience variables */
mesg_src = &(oh_src->mesg[mesgno]);
mesg_dst = &(oh_dst->mesg[mesgno]);
/* Check for shared message to operate on */
/* (Use destination message, in case the message has been removed (i.e
* converted to a nil message) in the destination -QAK)
*/
if (mesg_dst->flags & H5O_FLAG_SHARED)
copy_type = H5O_MSG_SHARED;
else
copy_type = mesg_dst->type;
/* copy this message into destination file */
HDassert(copy_type);
if(copy_type->copy_file) {
/*
* Decode the message if necessary. If the message is shared then do
* a shared message, ignoring the message type.
*/
if(NULL == mesg_src->native) {
/* Decode the message if necessary */
HDassert(copy_type->decode);
if(NULL == (mesg_src->native = (copy_type->decode)(oloc_src->file, dxpl_id, mesg_src->raw)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTDECODE, FAIL, "unable to decode a message")
} /* end if (NULL == mesg_src->native) */
/* Copy the source message */
if(H5O_CONT_ID == mesg_src->type->id) {
if((mesg_dst->native = H5O_copy_mesg_file(copy_type, oloc_src->file, mesg_src->native,
oloc_dst->file, dxpl_id, cpy_info, oh_dst->chunk)) == NULL)
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, FAIL, "unable to copy object header message")
} /* end if */
else {
if((mesg_dst->native = H5O_copy_mesg_file(copy_type, oloc_src->file, mesg_src->native,
oloc_dst->file, dxpl_id, cpy_info, udata)) == NULL)
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, FAIL, "unable to copy object header message")
} /* end else */
/*
* Encode the message. If the message is shared then we
* encode a Shared Object message instead of the object
* which is being shared.
*/
if((copy_type->encode)(oloc_dst->file, mesg_dst->raw, mesg_dst->native) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTENCODE, FAIL, "unable to encode object header message")
} /* end if (mesg_src->type->copy_file) */
} /* end of mesgno loop */
/* Set the dest. object location to the first chunk address */
HDassert(H5F_addr_defined(addr_new));
oloc_dst->addr = addr_new;
/* Allocate space for the address mapping of the object copied */
if(NULL == (addr_map = H5FL_MALLOC(H5O_addr_map_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
/* Insert the address mapping for the new object into the copied list */
/* (Do this here, because "post copy" possibly checks it) */
addr_map->src_addr = oloc_src->addr;
addr_map->dst_addr = oloc_dst->addr;
addr_map->is_locked = TRUE; /* We've locked the object currently */
addr_map->inc_ref_count = 0; /* Start with no additional ref counts to add */
if(H5SL_insert(cpy_info->map_list, addr_map, &(addr_map->src_addr)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINSERT, FAIL, "can't insert object into skip list")
/* "post copy" loop over messages, to fix up any messages which require a complete
* object header for destination object
*/
for(mesgno = 0; mesgno < oh_src->nmesgs; mesgno++) {
/* Set up convenience variables */
mesg_src = &(oh_src->mesg[mesgno]);
mesg_dst = &(oh_dst->mesg[mesgno]);
/* Check for shared message to operate on */
/* (Use destination message, in case the message has been removed (i.e
* converted to a nil message) in the destination -QAK)
*/
if(mesg_dst->flags & H5O_FLAG_SHARED)
copy_type = H5O_MSG_SHARED;
else
copy_type = mesg_dst->type;
HDassert(copy_type);
if(copy_type->post_copy_file && mesg_src->native) {
hbool_t modified = FALSE;
/* Get destination message */
HDassert(mesg_dst->type == mesg_src->type);
/* Make certain the destination's native info is available */
LOAD_NATIVE(oloc_dst->file, dxpl_id, mesg_dst, FAIL)
/* Perform "post copy" operation on messge */
if((copy_type->post_copy_file)(oloc_src, mesg_src->native, oloc_dst,
mesg_dst->native, &modified, dxpl_id, cpy_info) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to perform 'post copy' operation on message")
/* Mark message and header as dirty if the destination message was modified */
if(modified)
mesg_dst->dirty = TRUE;
} /* end if */
} /* end for */
/* Indicate that the destination address will no longer be locked */
addr_map->is_locked = FALSE;
/* Increment object header's reference count, if any descendents have created links to link to this object */
if(addr_map->inc_ref_count) {
H5_CHECK_OVERFLOW(addr_map->inc_ref_count, hsize_t, int);
oh_dst->nlink += (int)addr_map->inc_ref_count;
} /* end if */
/* Insert destination object header in cache */
if(H5AC_set(oloc_dst->file, dxpl_id, H5AC_OHDR, oloc_dst->addr, oh_dst, H5AC__DIRTIED_FLAG) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to cache object header")
done:
/* Release pointer to source object header and it's derived objects */
if(oh_src != NULL) {
/* Unprotect the source object header */
if(H5AC_unprotect(oloc_src->file, dxpl_id, H5AC_OHDR, oloc_src->addr, oh_src, H5AC__NO_FLAGS_SET) < 0)
HDONE_ERROR(H5E_OHDR, H5E_PROTECT, FAIL, "unable to release object header")
} /* end if */
/* Release pointer to destination object header */
if(ret_value < 0 && oh_dst) {
if(H5O_dest(oloc_dst->file, oh_dst) < 0)
HDONE_ERROR(H5E_OHDR, H5E_CANTFREE, FAIL, "unable to destroy object header data")
} /* end if */
/* Release user data for particular type of object to copy */
if(udata) {
HDassert(obj_class);
HDassert(obj_class->free_copy_file_udata);
(obj_class->free_copy_file_udata)(udata);
} /* end if */
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_copy_header_real() */
/*-------------------------------------------------------------------------
* Function: H5O_copy_header_map
*
* Purpose: Copy header object from one location to another, detecting
* already mapped objects, etc.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* November 1, 2005
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_copy_header_map(const H5O_loc_t *oloc_src, H5O_loc_t *oloc_dst /*out */,
hid_t dxpl_id, H5O_copy_t *cpy_info, hbool_t inc_depth)
{
H5O_addr_map_t *addr_map; /* Address mapping of object copied */
hbool_t inc_link; /* Whether to increment the link count for the object */
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI(H5O_copy_header_map, FAIL)
/* Sanity check */
HDassert(oloc_src);
HDassert(oloc_dst);
HDassert(oloc_dst->file);
HDassert(cpy_info);
/* Look up the address of the object to copy in the skip list */
addr_map = (H5O_addr_map_t *)H5SL_search(cpy_info->map_list, &(oloc_src->addr));
/* Check if address is already in list of objects copied */
if(addr_map == NULL) {
/* Copy object for the first time */
/* Check for incrementing the depth of copy */
/* (Can't do this for all copies, since shared datatypes should always be copied) */
if(inc_depth)
cpy_info->curr_depth++;
/* Copy object referred to */
if(H5O_copy_header_real(oloc_src, oloc_dst, dxpl_id, cpy_info) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, FAIL, "unable to copy object")
/* Check for incrementing the depth of copy */
if(inc_depth)
cpy_info->curr_depth--;
/* When an object is copied for the first time, increment it's link */
inc_link = TRUE;
/* indicate that a new object is created */
ret_value++;
} /* end if */
else {
/* Object has already been copied, set it's address in destination file */
oloc_dst->addr = addr_map->dst_addr;
/* If the object is locked currently (because we are copying a group
* hierarchy and this is a link to a group higher in the hierarchy),
* increment it's deferred reference count instead of incrementing the
* reference count now.
*/
if(addr_map->is_locked) {
addr_map->inc_ref_count++;
inc_link = FALSE;
} /* end if */
else
inc_link = TRUE;
} /* end else */
/* Increment destination object's link count, if allowed */
if(inc_link)
if(H5O_link(oloc_dst, 1, dxpl_id) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to increment object link count")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_copy_header_map() */
/*--------------------------------------------------------------------------
NAME
H5O_copy_free_addrmap_cb
PURPOSE
Internal routine to free address maps from the skip list for copying objects
USAGE
herr_t H5O_copy_free_addrmap_cb(item, key, op_data)
void *item; IN/OUT: Pointer to addr
void *key; IN/OUT: (unused)
void *op_data; IN: (unused)
RETURNS
Returns zero on success, negative on failure.
DESCRIPTION
Releases the memory for the address.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5O_copy_free_addrmap_cb(void *item, void UNUSED *key, void UNUSED *op_data)
{
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5O_copy_free_addrmap_cb)
HDassert(item);
/* Release the item */
H5FL_FREE(H5O_addr_map_t, item);
FUNC_LEAVE_NOAPI(0)
} /* H5O_copy_free_addrmap_cb() */
/*-------------------------------------------------------------------------
* Function: H5O_copy_header
*
* Purpose: copy header object from one location to another.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* May 30, 2005
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_copy_header(const H5O_loc_t *oloc_src, H5O_loc_t *oloc_dst /*out */,
hid_t dxpl_id, unsigned cpy_option)
{
H5O_copy_t cpy_info; /* Information for copying object */
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI(H5O_copy_header, FAIL)
HDassert(oloc_src);
HDassert(oloc_src->file);
HDassert(H5F_addr_defined(oloc_src->addr));
HDassert(oloc_dst->file);
/* Convert copy flags into copy struct */
HDmemset(&cpy_info, 0, sizeof(H5O_copy_t));
if((cpy_option & H5G_COPY_SHALLOW_HIERARCHY_FLAG) > 0) {
cpy_info.copy_shallow = TRUE;
cpy_info.max_depth = 1;
} /* end if */
else
cpy_info.max_depth = -1; /* Current default is for full, recursive hier. copy */
cpy_info.curr_depth = 0;
if((cpy_option & H5G_COPY_EXPAND_SOFT_LINK_FLAG) > 0)
cpy_info.expand_soft_link = TRUE;
if((cpy_option & H5G_COPY_EXPAND_EXT_LINK_FLAG) > 0)
cpy_info.expand_ext_link = TRUE;
if((cpy_option & H5G_COPY_EXPAND_REFERENCE_FLAG) > 0)
cpy_info.expand_ref = TRUE;
if((cpy_option & H5G_COPY_WITHOUT_ATTR_FLAG) > 0)
cpy_info.copy_without_attr = TRUE;
/* Create a skip list to keep track of which objects are copied */
if((cpy_info.map_list = H5SL_create(H5SL_TYPE_HADDR, 0.5, 16)) == NULL)
HGOTO_ERROR(H5E_SLIST, H5E_CANTCREATE, FAIL, "cannot make skip list")
/* copy the object from the source file to the destination file */
if(H5O_copy_header_real(oloc_src, oloc_dst, dxpl_id, &cpy_info) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, FAIL, "unable to copy object")
done:
if(cpy_info.map_list)
H5SL_destroy(cpy_info.map_list, H5O_copy_free_addrmap_cb, NULL);
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_copy_header() */
/*-------------------------------------------------------------------------
* Function: H5O_copy_obj_by_ref
*
* Purpose: Copy the object pointed by _src_ref.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* Aug 7 2006
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O_copy_obj_by_ref(H5O_loc_t *src_oloc, hid_t dxpl_id, H5O_loc_t *dst_oloc,
H5G_loc_t *dst_root_loc, H5O_copy_t *cpy_info)
{
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI(H5O_copy_obj_by_ref, FAIL)
HDassert(src_oloc);
HDassert(dst_oloc);
/* Perform the copy, or look up existing copy */
if((ret_value = H5O_copy_header_map(src_oloc, dst_oloc, dxpl_id, cpy_info, FALSE)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, FAIL, "unable to copy object")
/* Check if a new valid object is copied to the destination */
if(H5F_addr_defined(dst_oloc->addr) && (ret_value > SUCCEED)) {
char tmp_obj_name[80];
H5G_name_t new_path;
H5O_loc_t new_oloc;
H5G_loc_t new_loc;
/* Set up group location for new object */
new_loc.oloc = &new_oloc;
new_loc.path = &new_path;
H5G_loc_reset(&new_loc);
new_oloc.file = dst_oloc->file;
new_oloc.addr = dst_oloc->addr;
/* Pick a default name for the new object */
sprintf(tmp_obj_name, "~obj_pointed_by_%llu", (unsigned long_long)dst_oloc->addr);
/* Create a link to the newly copied object */
if(H5L_link(dst_root_loc, tmp_obj_name, &new_loc, H5P_DEFAULT, H5P_DEFAULT, dxpl_id) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, "unable to insert link")
H5G_loc_free(&new_loc);
} /* if (H5F_addr_defined(dst_oloc.addr)) */
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_copy_obj_by_ref() */
/*-------------------------------------------------------------------------
* Function: H5O_copy_expand_ref
*
* Purpose: Copy the object pointed by _src_ref.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* Aug 7 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_copy_expand_ref(H5F_t *file_src, void *_src_ref, hid_t dxpl_id,
H5F_t *file_dst, void *_dst_ref, size_t ref_count, H5R_type_t ref_type,
H5O_copy_t *cpy_info)
{
H5O_loc_t dst_oloc; /* Copied object object location */
H5O_loc_t src_oloc; /* Temporary object location for source object */
H5G_loc_t dst_root_loc; /* The location of root group of the destination file */
uint8_t *p; /* Pointer to OID to store */
size_t i; /* Local index variable */
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI(H5O_copy_expand_ref, FAIL)
/* Sanity checks */
HDassert(file_src);
HDassert(_src_ref);
HDassert(file_dst);
HDassert(_dst_ref);
HDassert(ref_count);
HDassert(cpy_info);
/* Initialize object locations */
H5O_loc_reset(&src_oloc);
H5O_loc_reset(&dst_oloc);
src_oloc.file = file_src;
dst_oloc.file = file_dst;
/* Set up the root group in the destination file */
if(NULL == (dst_root_loc.oloc = H5G_oloc(H5G_rootof(file_dst))))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "unable to get object location for root group")
if(NULL == (dst_root_loc.path = H5G_nameof(H5G_rootof(file_dst))))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "unable to get path for root group")
/* Copy object references */
if(H5R_OBJECT == ref_type) {
hobj_ref_t *src_ref = (hobj_ref_t *)_src_ref;
hobj_ref_t *dst_ref = (hobj_ref_t *)_dst_ref;
/* Making equivalent references in the destination file */
for(i = 0; i < ref_count; i++) {
/* Set up for the object copy for the reference */
p = (uint8_t *)(&src_ref[i]);
H5F_addr_decode(src_oloc.file, (const uint8_t **)&p, &(src_oloc.addr));
dst_oloc.addr = HADDR_UNDEF;
/* Attempt to copy object from source to destination file */
if(H5O_copy_obj_by_ref(&src_oloc, dxpl_id, &dst_oloc, &dst_root_loc, cpy_info) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, FAIL, "unable to copy object")
/* Set the object reference info for the destination file */
p = (uint8_t *)(&dst_ref[i]);
H5F_addr_encode(dst_oloc.file, &p, dst_oloc.addr);
} /* end for */
} /* end if */
/* Copy region references */
else if(H5R_DATASET_REGION == ref_type) {
hdset_reg_ref_t *src_ref = (hdset_reg_ref_t *)_src_ref;
hdset_reg_ref_t *dst_ref = (hdset_reg_ref_t *)_dst_ref;
uint8_t *buf; /* Buffer to store serialized selection in */
H5HG_t hobjid; /* Heap object ID */
size_t buf_size; /* Length of object in heap */
/* Making equivalent references in the destination file */
for(i = 0; i < ref_count; i++) {
/* Get the heap ID for the dataset region */
p = (uint8_t *)(&src_ref[i]);
H5F_addr_decode(src_oloc.file, (const uint8_t **)&p, &(hobjid.addr));
INT32DECODE(p, hobjid.idx);
/* Get the dataset region from the heap (allocate inside routine) */
if((buf = H5HG_read(src_oloc.file, dxpl_id, &hobjid, NULL, &buf_size)) == NULL)
HGOTO_ERROR(H5E_REFERENCE, H5E_READERROR, FAIL, "Unable to read dataset region information")
/* Get the object oid for the dataset */
p = (uint8_t *)buf;
H5F_addr_decode(src_oloc.file, (const uint8_t **)&p, &(src_oloc.addr));
dst_oloc.addr = HADDR_UNDEF;
/* copy the object pointed by the ref to the destination */
if(H5O_copy_obj_by_ref(&src_oloc, dxpl_id, &dst_oloc, &dst_root_loc, cpy_info) < 0) {
H5MM_xfree(buf);
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, FAIL, "unable to copy object")
} /* end if */
/* Serialize object ID */
p = (uint8_t *)buf;
H5F_addr_encode(dst_oloc.file, &p, dst_oloc.addr);
/* Save the serialized buffer to the destination */
if(H5HG_insert(dst_oloc.file, dxpl_id, buf_size, buf, &hobjid) < 0) {
H5MM_xfree(buf);
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, FAIL, "Unable to write dataset region information")
} /* end if */
/* Set the dataset region reference info for the destination file */
p = (uint8_t *)(&dst_ref[i]);
H5F_addr_encode(dst_oloc.file, &p, hobjid.addr);
INT32ENCODE(p, hobjid.idx);
/* Free the buffer allocated in H5HG_read() */
H5MM_xfree(buf);
} /* end for */
} /* end if */
else
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid reference type")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_copy_expand_ref() */
/*-------------------------------------------------------------------------
* Function: H5O_debug_id
*
* Purpose: Act as a proxy for calling the 'debug' method for a
* particular class of object header.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Feb 13 2003
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_debug_id(unsigned type_id, H5F_t *f, hid_t dxpl_id, const void *mesg, FILE *stream, int indent, int fwidth)
{
const H5O_msg_class_t *type; /* Actual H5O class type for the ID */
herr_t ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5O_debug_id,FAIL);
/* Check args */
assert(type_id < NELMTS(H5O_msg_class_g));
type=H5O_msg_class_g[type_id]; /* map the type ID to the actual type object */
assert(type);
assert(type->debug);
assert(f);
assert(mesg);
assert(stream);
assert(indent >= 0);
assert(fwidth >= 0);
/* Call the debug method in the class */
if ((ret_value = (type->debug)(f, dxpl_id, mesg, stream, indent, fwidth)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_BADTYPE, FAIL, "unable to debug message");
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5O_debug_id() */
/*-------------------------------------------------------------------------
* Function: H5O_debug_real
*
* Purpose: Prints debugging info about an object header.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 6 1997
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_debug_real(H5F_t *f, hid_t dxpl_id, H5O_t *oh, haddr_t addr, FILE *stream, int indent, int fwidth)
{
unsigned i, chunkno;
size_t mesg_total = 0, chunk_total = 0;
int *sequence;
haddr_t tmp_addr;
void *(*decode)(H5F_t*, hid_t, const uint8_t*);
herr_t (*debug)(H5F_t*, hid_t, const void*, FILE*, int, int)=NULL;
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI(H5O_debug_real, FAIL)
/* check args */
HDassert(f);
HDassert(oh);
HDassert(H5F_addr_defined(addr));
HDassert(stream);
HDassert(indent >= 0);
HDassert(fwidth >= 0);
/* debug */
HDfprintf(stream, "%*sObject Header...\n", indent, "");
HDfprintf(stream, "%*s%-*s %d\n", indent, "", fwidth,
"Dirty:",
(int) (oh->cache_info.is_dirty));
HDfprintf(stream, "%*s%-*s %d\n", indent, "", fwidth,
"Version:",
(int) (oh->version));
HDfprintf(stream, "%*s%-*s %u\n", indent, "", fwidth,
"Header size (in bytes):",
(unsigned) H5O_SIZEOF_HDR(f));
HDfprintf(stream, "%*s%-*s %d\n", indent, "", fwidth,
"Number of links:",
(int) (oh->nlink));
HDfprintf(stream, "%*s%-*s %u (%u)\n", indent, "", fwidth,
"Number of messages (allocated):",
(unsigned) (oh->nmesgs), (unsigned) (oh->alloc_nmesgs));
HDfprintf(stream, "%*s%-*s %u (%u)\n", indent, "", fwidth,
"Number of chunks (allocated):",
(unsigned) (oh->nchunks), (unsigned) (oh->alloc_nchunks));
/* debug each chunk */
for (i=0, chunk_total=0; i < oh->nchunks; i++) {
chunk_total += oh->chunk[i].size;
HDfprintf(stream, "%*sChunk %d...\n", indent, "", i);
HDfprintf(stream, "%*s%-*s %d\n", indent + 3, "", MAX(0, fwidth - 3),
"Dirty:",
(int) (oh->chunk[i].dirty));
HDfprintf(stream, "%*s%-*s %a\n", indent + 3, "", MAX(0, fwidth - 3),
"Address:", oh->chunk[i].addr);
tmp_addr = addr + (hsize_t)H5O_SIZEOF_HDR(f);
if (0 == i && H5F_addr_ne(oh->chunk[i].addr, tmp_addr))
HDfprintf(stream, "*** WRONG ADDRESS!\n");
HDfprintf(stream, "%*s%-*s %lu\n", indent + 3, "", MAX(0, fwidth - 3),
"Size in bytes:",
(unsigned long) (oh->chunk[i].size));
}
/* debug each message */
if (NULL==(sequence = H5MM_calloc(NELMTS(H5O_msg_class_g)*sizeof(int))))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed");
for (i=0, mesg_total=0; i < oh->nmesgs; i++) {
mesg_total += H5O_SIZEOF_MSGHDR(f) + oh->mesg[i].raw_size;
HDfprintf(stream, "%*sMessage %d...\n", indent, "", i);
/* check for bad message id */
if (oh->mesg[i].type->id >= (int)NELMTS(H5O_msg_class_g)) {
HDfprintf(stream, "*** BAD MESSAGE ID 0x%04x\n",
oh->mesg[i].type->id);
continue;
}
/* message name and size */
HDfprintf(stream, "%*s%-*s 0x%04x `%s' (%d)\n",
indent + 3, "", MAX(0, fwidth - 3),
"Message ID (sequence number):",
(unsigned) (oh->mesg[i].type->id),
oh->mesg[i].type->name,
sequence[oh->mesg[i].type->id]++);
HDfprintf (stream, "%*s%-*s %d\n", indent+3, "", MAX (0, fwidth-3),
"Dirty:",
(int)(oh->mesg[i].dirty));
HDfprintf (stream, "%*s%-*s %s\n", indent+3, "", MAX (0, fwidth-3),
"Shared:",
(oh->mesg[i].flags & H5O_FLAG_SHARED) ? "Yes" : "No");
HDfprintf(stream, "%*s%-*s %s\n", indent + 3, "", MAX(0, fwidth - 3),
"Constant:",
(oh->mesg[i].flags & H5O_FLAG_CONSTANT) ? "Yes" : "No");
if (oh->mesg[i].flags & ~H5O_FLAG_BITS) {
HDfprintf (stream, "%*s%-*s 0x%02x\n", indent+3,"",MAX(0,fwidth-3),
"*** ADDITIONAL UNKNOWN FLAGS --->",
oh->mesg[i].flags & ~H5O_FLAG_BITS);
}
HDfprintf(stream, "%*s%-*s %lu bytes\n", indent+3, "", MAX(0,fwidth-3),
"Raw size in obj header:",
(unsigned long) (oh->mesg[i].raw_size));
HDfprintf(stream, "%*s%-*s %d\n", indent + 3, "", MAX(0, fwidth - 3),
"Chunk number:",
(int) (oh->mesg[i].chunkno));
chunkno = oh->mesg[i].chunkno;
if (chunkno >= oh->nchunks)
HDfprintf(stream, "*** BAD CHUNK NUMBER\n");
HDfprintf(stream, "%*s%-*s %u\n", indent + 3, "", MAX(0, fwidth - 3),
"Raw data offset in chunk:",
(unsigned) (oh->mesg[i].raw - oh->chunk[chunkno].image));
/* check the size */
if ((oh->mesg[i].raw + oh->mesg[i].raw_size >
oh->chunk[chunkno].image + oh->chunk[chunkno].size) ||
(oh->mesg[i].raw < oh->chunk[chunkno].image)) {
HDfprintf(stream, "*** BAD MESSAGE RAW ADDRESS\n");
}
/* decode the message */
if (oh->mesg[i].flags & H5O_FLAG_SHARED) {
decode = H5O_MSG_SHARED->decode;
debug = H5O_MSG_SHARED->debug;
} else {
decode = oh->mesg[i].type->decode;
debug = oh->mesg[i].type->debug;
}
if (NULL==oh->mesg[i].native && decode)
oh->mesg[i].native = (decode)(f, dxpl_id, oh->mesg[i].raw);
if (NULL==oh->mesg[i].native)
debug = NULL;
/* print the message */
HDfprintf(stream, "%*s%-*s\n", indent + 3, "", MAX(0, fwidth - 3),
"Message Information:");
if (debug)
(debug)(f, dxpl_id, oh->mesg[i].native, stream, indent+6, MAX(0, fwidth-6));
else
HDfprintf(stream, "%*s<No info for this message>\n", indent + 6, "");
/* If the message is shared then also print the pointed-to message */
if (oh->mesg[i].flags & H5O_FLAG_SHARED) {
H5O_shared_t *shared = (H5O_shared_t*)(oh->mesg[i].native);
void *mesg = NULL;
mesg = H5O_read_real(&(shared->oloc), oh->mesg[i].type, 0, NULL, dxpl_id);
if (oh->mesg[i].type->debug)
(oh->mesg[i].type->debug)(f, dxpl_id, mesg, stream, indent+3, MAX (0, fwidth-3));
H5O_free_real(oh->mesg[i].type, mesg);
}
}
sequence = H5MM_xfree(sequence);
if (mesg_total != chunk_total)
HDfprintf(stream, "*** TOTAL SIZE DOES NOT MATCH ALLOCATED SIZE!\n");
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_debug_real() */
/*-------------------------------------------------------------------------
* Function: H5O_debug
*
* Purpose: Prints debugging info about an object header.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 6 1997
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_debug(H5F_t *f, hid_t dxpl_id, haddr_t addr, FILE *stream, int indent, int fwidth)
{
H5O_t *oh = NULL;
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI(H5O_debug, FAIL)
/* check args */
HDassert(f);
HDassert(H5F_addr_defined(addr));
HDassert(stream);
HDassert(indent >= 0);
HDassert(fwidth >= 0);
if(NULL == (oh = H5AC_protect(f, dxpl_id, H5AC_OHDR, addr, NULL, NULL, H5AC_READ)))
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, FAIL, "unable to load object header")
/* debug */
H5O_debug_real(f, dxpl_id, oh, addr, stream, indent, fwidth);
done:
if(oh && H5AC_unprotect(f, dxpl_id, H5AC_OHDR, addr, oh, H5AC__NO_FLAGS_SET) < 0)
HDONE_ERROR(H5E_OHDR, H5E_PROTECT, FAIL, "unable to release object header")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_debug() */
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