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|
/*-------------------------------------------------------------------------
* Copyright (C) 1997 National Center for Supercomputing Applications.
* All rights reserved.
*
*-------------------------------------------------------------------------
*
* Created: H5O.c
* Aug 5 1997
* Robb Matzke <matzke@llnl.gov>
*
* Purpose: Object header virtual functions.
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
#include <H5private.h>
#include <H5ACprivate.h>
#include <H5Eprivate.h>
#include <H5Fprivate.h>
#include <H5MFprivate.h>
#include <H5MMprivate.h>
#include <H5Oprivate.h>
#define PABLO_MASK H5O_mask
/* PRIVATE PROTOTYPES */
static herr_t H5O_flush(H5F_t *f, hbool_t destroy, const haddr_t *addr,
H5O_t *oh);
static H5O_t *H5O_load(H5F_t *f, const haddr_t *addr, const void *_udata1,
void *_udata2);
static intn H5O_find_in_ohdr(H5F_t *f, const haddr_t *addr,
const H5O_class_t **type_p, intn sequence);
static intn H5O_alloc(H5F_t *f, H5O_t *oh, const H5O_class_t *type,
size_t size);
static intn H5O_alloc_extend_chunk(H5O_t *oh, intn chunkno, size_t size);
static intn H5O_alloc_new_chunk(H5F_t *f, H5O_t *oh, size_t size);
/* H5O inherits cache-like properties from H5AC */
static const H5AC_class_t H5AC_OHDR[1] = {{
H5AC_OHDR_ID,
(void *(*)(H5F_t *, const haddr_t *, const void *, void *)) H5O_load,
(herr_t (*)(H5F_t *, hbool_t, const haddr_t *, void *)) H5O_flush,
}};
/* Interface initialization */
static intn interface_initialize_g = FALSE;
#define INTERFACE_INIT H5O_init_interface
static herr_t H5O_init_interface(void);
/* ID to type mapping */
static const H5O_class_t *const message_type_g[] = {
H5O_NULL, /*0x0000 Null */
H5O_SDSPACE, /*0x0001 Simple Dimensionality */
NULL, /*0x0002 Data space (fiber bundle?) */
H5O_DTYPE, /*0x0003 Data Type */
NULL, /*0x0004 Not assigned */
NULL, /*0x0005 Not assigned */
NULL, /*0x0006 Data storage -- compact object */
H5O_EFL, /*0x0007 Data storage -- external data files */
H5O_LAYOUT, /*0x0008 Data Layout */
NULL, /*0x0009 Not assigned */
NULL, /*0x000A Not assigned */
H5O_COMPRESS, /*0x000B Data storage -- compressed object */
H5O_ATTR, /*0x000C Attribute list */
H5O_NAME, /*0x000D Object name */
NULL, /*0x000E Object modification date and time */
NULL, /*0x000F Shared header message */
H5O_CONT, /*0x0010 Object header continuation */
H5O_STAB, /*0x0011 Symbol table */
};
/*
* An array of functions indexed by symbol table entry cache type
* (H5G_type_t) that are called to retrieve constant messages cached in the
* symbol table entry.
*/
static void *(*H5O_fast_g[H5G_NCACHED]) (const H5G_cache_t *,
const H5O_class_t *,
void *);
/*-------------------------------------------------------------------------
* Function: H5O_init_interface
*
* Purpose: Initialize the H5O interface.
*
* Return: Success: SUCCEED
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* Tuesday, January 6, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O_init_interface(void)
{
FUNC_ENTER(H5O_init_interface, FAIL);
/*
* Initialize functions that decode messages from symbol table entries.
*/
H5O_fast_g[H5G_CACHED_STAB] = H5O_stab_fast;
FUNC_LEAVE(SUCCEED);
}
/*-------------------------------------------------------------------------
* Function: H5O_create
*
* Purpose: Creates a new object header, sets the link count
* to 0, and caches the header. The object header is opened for
* write access and should eventually be closed by calling
* H5O_close().
*
* Return: Success: SUCCEED, the ENT argument contains
* information about the object header,
* including its address.
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 5 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_create(H5F_t *f, size_t size_hint, H5G_entry_t *ent/*out*/)
{
size_t size; /*total size of object header */
H5O_t *oh = NULL;
haddr_t tmp_addr;
FUNC_ENTER(H5O_create, FAIL);
/* check args */
assert(f);
assert(ent);
HDmemset(ent, 0, sizeof(H5G_entry_t));
size_hint = H5O_ALIGN (MAX (H5O_MIN_SIZE, size_hint));
/* allocate disk space for header and first chunk */
size = H5O_SIZEOF_HDR(f) + size_hint;
ent->file = f;
if (H5MF_alloc(f, H5MF_META, (hsize_t)size, &(ent->header)/*out*/) < 0) {
HRETURN_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL,
"unable to allocate file space for object header hdr");
}
/* allocate the object header and fill in header fields */
oh = H5MM_xcalloc(1, sizeof(H5O_t));
oh->dirty = TRUE;
oh->version = H5O_VERSION;
oh->nlink = 0;
/* create the chunk list and initialize the first chunk */
oh->nchunks = 1;
oh->alloc_nchunks = H5O_NCHUNKS;
oh->chunk = H5MM_xmalloc(oh->alloc_nchunks * sizeof(H5O_chunk_t));
tmp_addr = ent->header;
H5F_addr_inc(&tmp_addr, (hsize_t)H5O_SIZEOF_HDR(f));
oh->chunk[0].dirty = TRUE;
oh->chunk[0].addr = tmp_addr;
oh->chunk[0].size = size_hint;
oh->chunk[0].image = H5MM_xcalloc(1, size_hint);
/* create the message list and initialize the first message */
oh->nmesgs = 1;
oh->alloc_nmesgs = H5O_NMESGS;
oh->mesg = H5MM_xcalloc(oh->alloc_nmesgs, sizeof(H5O_mesg_t));
oh->mesg[0].type = H5O_NULL;
oh->mesg[0].dirty = TRUE;
oh->mesg[0].native = NULL;
oh->mesg[0].raw = oh->chunk[0].image + H5O_SIZEOF_MSGHDR(f);
oh->mesg[0].raw_size = size_hint - H5O_SIZEOF_MSGHDR(f);
oh->mesg[0].chunkno = 0;
/* cache it */
if (H5AC_set(f, H5AC_OHDR, &(ent->header), oh) < 0) {
H5MM_xfree(oh);
HRETURN_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL,
"unable to cache object header");
}
/* open it */
if (H5O_open(ent) < 0) {
HRETURN_ERROR(H5E_OHDR, H5E_CANTOPENOBJ, FAIL,
"unable to open object header");
}
FUNC_LEAVE(SUCCEED);
}
/*-------------------------------------------------------------------------
* Function: H5O_open
*
* Purpose: Opens an object header which is described by the symbol table
* entry OBJ_ENT.
*
* Return: Success: SUCCEED
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* Monday, January 5, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_open(H5G_entry_t *obj_ent)
{
FUNC_ENTER(H5O_open, FAIL);
/* Check args */
assert(obj_ent);
assert(obj_ent->file);
#ifdef H5O_DEBUG
fprintf(stderr, ">");
H5F_addr_print(stderr, &(obj_ent->header));
fprintf(stderr, "\n");
#endif
/* Increment open-lock counters */
obj_ent->file->nopen++;
FUNC_LEAVE(SUCCEED);
}
/*-------------------------------------------------------------------------
* Function: H5O_close
*
* Purpose: Closes an object header that was previously open.
*
* Return: Success: SUCCEED
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* Monday, January 5, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_close(H5G_entry_t *obj_ent)
{
FUNC_ENTER(H5O_close, FAIL);
/* Check args */
assert(obj_ent);
assert(obj_ent->file);
assert(obj_ent->file->nopen > 0);
/* Decrement open-lock counters */
--obj_ent->file->nopen;
/*
* If the file open-lock count has reached zero and the file has a close
* pending then close the file.
*/
if (0 == obj_ent->file->nopen && obj_ent->file->close_pending) {
H5F_close(obj_ent->file);
}
#ifdef H5O_DEBUG
fprintf(stderr, "<");
H5F_addr_print(stderr, &(obj_ent->header));
fprintf(stderr, "\n");
#endif
FUNC_LEAVE(SUCCEED);
}
/*-------------------------------------------------------------------------
* Function: H5O_load
*
* Purpose: Loads an object header from disk.
*
* Return: Success: Pointer to the new object header.
*
* Failure: NULL
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 5 1997
*
* Modifications:
*
* Robb Matzke, 30 Aug 1997
* Plugged memory leaks that occur during error handling.
*
* Robb Matzke, 7 Jan 1998
* Able to distinguish between constant and variable messages.
*
*-------------------------------------------------------------------------
*/
static H5O_t *
H5O_load(H5F_t *f, const haddr_t *addr, const void __unused__ *_udata1,
void __unused__ *_udata2)
{
H5O_t *oh = NULL;
H5O_t *ret_value = NULL;
uint8 buf[16], *p;
size_t hdr_size, mesg_size;
uintn id;
intn mesgno, chunkno, curmesg = 0, nmesgs;
haddr_t chunk_addr;
size_t chunk_size;
H5O_cont_t *cont = NULL;
uint8 flags;
FUNC_ENTER(H5O_load, NULL);
/* check args */
assert(f);
assert(addr && H5F_addr_defined(addr));
assert(!_udata1);
assert(!_udata2);
/* allocate ohdr and init chunk list */
oh = H5MM_xcalloc(1, sizeof(H5O_t));
/* read fixed-lenth part of object header */
hdr_size = H5O_SIZEOF_HDR(f);
if (H5F_block_read(f, addr, (hsize_t)hdr_size, buf) < 0) {
HGOTO_ERROR(H5E_OHDR, H5E_READERROR, NULL,
"unable to read object header");
}
p = buf;
/* decode version */
oh->version = *p++;
if (H5O_VERSION != oh->version) {
HGOTO_ERROR(H5E_OHDR, H5E_VERSION, NULL,
"bad object header version number");
}
/* reserved */
p++;
/* decode number of messages */
UINT16DECODE(p, nmesgs);
/* decode link count */
UINT32DECODE(p, oh->nlink);
/* decode first chunk info */
chunk_addr = *addr;
H5F_addr_inc(&chunk_addr, (hsize_t)H5O_SIZEOF_HDR(f));
UINT32DECODE(p, chunk_size);
/* build the message array */
oh->alloc_nmesgs = MAX(H5O_NMESGS, nmesgs);
oh->mesg = H5MM_xcalloc(oh->alloc_nmesgs, sizeof(H5O_mesg_t));
/* read each chunk from disk */
while (H5F_addr_defined(&chunk_addr)) {
/* increase chunk array size */
if (oh->nchunks >= oh->alloc_nchunks) {
oh->alloc_nchunks += H5O_NCHUNKS;
oh->chunk = H5MM_xrealloc(oh->chunk,
oh->alloc_nchunks * sizeof(H5O_chunk_t));
}
/* read the chunk raw data */
chunkno = oh->nchunks++;
oh->chunk[chunkno].dirty = FALSE;
oh->chunk[chunkno].addr = chunk_addr;
oh->chunk[chunkno].size = chunk_size;
oh->chunk[chunkno].image = H5MM_xmalloc(chunk_size);
if (H5F_block_read(f, &chunk_addr, (hsize_t)chunk_size,
oh->chunk[chunkno].image) < 0) {
HGOTO_ERROR(H5E_OHDR, H5E_READERROR, NULL,
"unable to read object header data");
}
/* load messages from this chunk */
for (p = oh->chunk[chunkno].image;
p < oh->chunk[chunkno].image + chunk_size;
p += mesg_size) {
UINT16DECODE(p, id);
UINT16DECODE(p, mesg_size);
assert (mesg_size==H5O_ALIGN (mesg_size));
flags = *p++;
p += 3; /*reserved*/
if (id >= NELMTS(message_type_g) || NULL == message_type_g[id]) {
HGOTO_ERROR(H5E_OHDR, H5E_BADMESG, NULL,
"corrupt object header");
}
if (p + mesg_size > oh->chunk[chunkno].image + chunk_size) {
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, NULL,
"corrupt object header");
}
if (H5O_NULL_ID == id && oh->nmesgs > 0 &&
H5O_NULL_ID == oh->mesg[oh->nmesgs - 1].type->id &&
oh->mesg[oh->nmesgs - 1].chunkno == chunkno) {
/* combine adjacent null messages */
mesgno = oh->nmesgs - 1;
oh->mesg[mesgno].raw_size += H5O_SIZEOF_MSGHDR(f) + mesg_size;
} else {
/* new message */
if (oh->nmesgs >= nmesgs) {
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, NULL,
"corrupt object header");
}
mesgno = oh->nmesgs++;
oh->mesg[mesgno].type = message_type_g[id];
oh->mesg[mesgno].dirty = FALSE;
oh->mesg[mesgno].flags = flags;
oh->mesg[mesgno].native = NULL;
oh->mesg[mesgno].raw = p;
oh->mesg[mesgno].raw_size = mesg_size;
oh->mesg[mesgno].chunkno = chunkno;
}
}
assert(p == oh->chunk[chunkno].image + chunk_size);
/* decode next object header continuation message */
for (H5F_addr_undef(&chunk_addr);
!H5F_addr_defined(&chunk_addr) && curmesg < oh->nmesgs;
curmesg++) {
if (H5O_CONT_ID == oh->mesg[curmesg].type->id) {
uint8 *p2 = oh->mesg[curmesg].raw;
cont = (H5O_CONT->decode) (f, p2, NULL);
oh->mesg[curmesg].native = cont;
chunk_addr = cont->addr;
chunk_size = cont->size;
cont->chunkno = oh->nchunks; /*the next chunk to allocate */
}
}
}
ret_value = oh;
done:
if (!ret_value && oh) {
/*
* Free resources.
*/
int i;
for (i = 0; i < oh->nchunks; i++) {
oh->chunk[i].image = H5MM_xfree(oh->chunk[i].image);
}
oh->chunk = H5MM_xfree(oh->chunk);
oh->mesg = H5MM_xfree(oh->mesg);
oh = H5MM_xfree(oh);
}
FUNC_LEAVE(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5O_flush
*
* Purpose: Flushes (and destroys) an object header.
*
* Return: Success: SUCCESS
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 5 1997
*
* Modifications:
*
* Robb Matzke, 7 Jan 1998
* Handles constant vs non-constant messages.
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O_flush(H5F_t *f, hbool_t destroy, const haddr_t *addr, H5O_t *oh)
{
uint8 buf[16], *p;
intn i, id;
H5O_cont_t *cont = NULL;
herr_t (*encode)(H5F_t*, uint8*, const void*) = NULL;
FUNC_ENTER(H5O_flush, FAIL);
/* check args */
assert(f);
assert(addr && H5F_addr_defined(addr));
assert(oh);
/* flush */
if (oh->dirty) {
p = buf;
/* encode version */
*p++ = oh->version;
/* reserved */
*p++ = 0;
/* encode number of messages */
UINT16ENCODE(p, oh->nmesgs);
/* encode link count */
UINT32ENCODE(p, oh->nlink);
/* encode body size */
UINT32ENCODE(p, oh->chunk[0].size);
/* zero to alignment */
HDmemset (p, 0, H5O_SIZEOF_HDR(f)-12);
/* write the object header header */
if (H5F_block_write(f, addr, (hsize_t)H5O_SIZEOF_HDR(f), buf) < 0) {
HRETURN_ERROR(H5E_OHDR, H5E_WRITEERROR, FAIL,
"unable to write object header hdr to disk");
}
/* encode messages */
for (i = 0; i < oh->nmesgs; i++) {
if (oh->mesg[i].dirty) {
p = oh->mesg[i].raw - H5O_SIZEOF_MSGHDR(f);
id = oh->mesg[i].type->id;
UINT16ENCODE(p, id);
UINT16ENCODE(p, oh->mesg[i].raw_size);
*p++ = oh->mesg[i].flags;
*p++ = 0; /*reserved*/
*p++ = 0; /*reserved*/
*p++ = 0; /*reserved*/
if (oh->mesg[i].native) {
assert(oh->mesg[i].type->encode);
/* allocate file space for chunks that have none yet */
if (H5O_CONT_ID == oh->mesg[i].type->id &&
!H5F_addr_defined(&(((H5O_cont_t *)
(oh->mesg[i].native))->addr))) {
cont = (H5O_cont_t *) (oh->mesg[i].native);
assert(cont->chunkno >= 0);
assert(cont->chunkno < oh->nchunks);
assert(!H5F_addr_defined(&(oh->chunk[cont->chunkno].addr)));
cont->size = oh->chunk[cont->chunkno].size;
if (H5MF_alloc(f, H5MF_META, (hsize_t)(cont->size),
&(cont->addr)/*out*/) < 0) {
HRETURN_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL,
"unable to allocate space for object "
"header data");
}
oh->chunk[cont->chunkno].addr = cont->addr;
}
/*
* Encode the message. If the message is shared then we
* encode a Shared Object message instead of the object
* which is being shared.
*/
assert(oh->mesg[i].raw >=
oh->chunk[oh->mesg[i].chunkno].image);
assert (oh->mesg[i].raw_size ==
H5O_ALIGN (oh->mesg[i].raw_size));
assert(oh->mesg[i].raw + oh->mesg[i].raw_size <=
oh->chunk[oh->mesg[i].chunkno].image +
oh->chunk[oh->mesg[i].chunkno].size);
if (oh->mesg[i].flags & H5O_FLAG_SHARED) {
encode = H5O_SHARED->encode;
} else {
encode = oh->mesg[i].type->encode;
}
if ((encode)(f, oh->mesg[i].raw, oh->mesg[i].native)<0) {
HRETURN_ERROR(H5E_OHDR, H5E_CANTENCODE, FAIL,
"unable to encode object header message");
}
}
oh->mesg[i].dirty = FALSE;
oh->chunk[oh->mesg[i].chunkno].dirty = TRUE;
}
}
/* write each chunk to disk */
for (i = 0; i < oh->nchunks; i++) {
if (oh->chunk[i].dirty) {
assert(H5F_addr_defined(&(oh->chunk[i].addr)));
if (H5F_block_write(f, &(oh->chunk[i].addr),
(hsize_t)(oh->chunk[i].size),
oh->chunk[i].image) < 0) {
HRETURN_ERROR(H5E_OHDR, H5E_WRITEERROR, FAIL,
"unable to write object header data to disk");
}
oh->chunk[i].dirty = FALSE;
}
}
oh->dirty = FALSE;
}
if (destroy) {
/* destroy chunks */
for (i = 0; i < oh->nchunks; i++) {
oh->chunk[i].image = H5MM_xfree(oh->chunk[i].image);
}
oh->chunk = H5MM_xfree(oh->chunk);
/* destroy messages */
for (i = 0; i < oh->nmesgs; i++) {
if (oh->mesg[i].flags & H5O_FLAG_SHARED) {
H5O_reset (H5O_SHARED, oh->mesg[i].native);
} else {
H5O_reset(oh->mesg[i].type, oh->mesg[i].native);
}
oh->mesg[i].native = H5MM_xfree(oh->mesg[i].native);
}
oh->mesg = H5MM_xfree(oh->mesg);
/* destroy object header */
H5MM_xfree(oh);
}
FUNC_LEAVE(SUCCEED);
}
/*-------------------------------------------------------------------------
* Function: H5O_reset
*
* Purpose: Some message data structures have internal fields that
* need to be freed. This function does that if appropriate
* but doesn't free NATIVE.
*
* Return: Success: SUCCEED
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 12 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_reset(const H5O_class_t *type, void *native)
{
FUNC_ENTER(H5O_reset, FAIL);
if (native) {
if (type->reset) {
if ((type->reset) (native) < 0) {
HRETURN_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL,
"reset method failed");
}
} else {
HDmemset(native, 0, type->native_size);
}
}
FUNC_LEAVE(SUCCEED);
}
/*-------------------------------------------------------------------------
* Function: H5O_link
*
* Purpose: Adjust the link count for an object header by adding
* ADJUST to the link count.
*
* Return: Success: New link count
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 5 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
intn
H5O_link(H5G_entry_t *ent, intn adjust)
{
H5O_t *oh = NULL;
intn ret_value = FAIL;
FUNC_ENTER(H5O_link, FAIL);
/* check args */
assert(ent);
assert(ent->file);
assert(H5F_addr_defined(&(ent->header)));
if (0==(ent->file->intent & H5F_ACC_RDWR)) {
HGOTO_ERROR (H5E_OHDR, H5E_WRITEERROR, FAIL,
"no write intent on file");
}
/* get header */
if (NULL == (oh = H5AC_protect(ent->file, H5AC_OHDR, &(ent->header),
NULL, NULL))) {
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, FAIL,
"unable to load object header");
}
/* adjust link count */
if (adjust < 0) {
if (oh->nlink + adjust < 0) {
HGOTO_ERROR(H5E_OHDR, H5E_LINKCOUNT, FAIL,
"link count would be negative");
}
oh->nlink += adjust;
} else {
oh->nlink += adjust;
}
oh->dirty = TRUE;
ret_value = oh->nlink;
done:
if (oh && H5AC_unprotect(ent->file, H5AC_OHDR, &(ent->header), oh) < 0) {
HRETURN_ERROR(H5E_OHDR, H5E_PROTECT, FAIL,
"unable to release object header");
}
FUNC_LEAVE(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5O_count
*
* Purpose: Counts the number of messages in an object header which are a
* certain type.
*
* Return: Success: Number of messages of specified type.
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* Tuesday, April 21, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
intn
H5O_count (H5G_entry_t *ent, const H5O_class_t *type)
{
H5O_t *oh = NULL;
intn i, acc;
FUNC_ENTER (H5O_count, FAIL);
/* Check args */
assert (ent);
assert (ent->file);
assert (H5F_addr_defined (&(ent->header)));
assert (type);
/* Load the object header */
if (NULL==(oh=H5AC_find (ent->file, H5AC_OHDR, &(ent->header),
NULL, NULL))) {
HRETURN_ERROR (H5E_OHDR, H5E_CANTLOAD, FAIL,
"unable to load object header");
}
for (i=acc=0; i<oh->nmesgs; i++) {
if (oh->mesg[i].type==type) acc++;
}
FUNC_LEAVE (acc);
}
/*-------------------------------------------------------------------------
* Function: H5O_read
*
* Purpose: Reads a message from an object header and returns a pointer
* to it. The caller will usually supply the memory through
* MESG and the return value will be MESG. But if MESG is
* the null pointer, then this function will malloc() memory
* to hold the result and return its pointer instead.
*
* Return: Success: Ptr to message in native format. The message
* should be freed by calling H5O_reset(). If
* MESG is a null pointer then the caller should
* also call H5MM_xfree() on the return value
* after calling H5O_reset().
*
* Failure: NULL
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 6 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
void *
H5O_read(H5G_entry_t *ent, const H5O_class_t *type, intn sequence, void *mesg)
{
H5O_t *oh = NULL;
void *ret_value = NULL;
intn idx;
H5G_cache_t *cache = NULL;
H5G_type_t cache_type;
FUNC_ENTER(H5O_read, NULL);
/* check args */
assert(ent);
assert(ent->file);
assert(H5F_addr_defined(&(ent->header)));
assert(type);
assert(sequence >= 0);
/* can we get it from the symbol table entry? */
cache = H5G_ent_cache(ent, &cache_type);
if (H5O_fast_g[cache_type]) {
ret_value = (H5O_fast_g[cache_type]) (cache, type, mesg);
if (ret_value)
HRETURN(ret_value);
H5E_clear(); /*don't care, try reading from header */
}
/* can we get it from the object header? */
if ((idx = H5O_find_in_ohdr(ent->file, &(ent->header), &type,
sequence)) < 0) {
HRETURN_ERROR(H5E_OHDR, H5E_NOTFOUND, NULL,
"unable to find message in object header");
}
/* copy the message to the user-supplied buffer */
if (NULL == (oh = H5AC_protect(ent->file, H5AC_OHDR, &(ent->header),
NULL, NULL))) {
HRETURN_ERROR(H5E_OHDR, H5E_CANTLOAD, NULL,
"unable to load object header");
}
if (oh->mesg[idx].flags & H5O_FLAG_SHARED) {
/*
* If the message is shared then then the native pointer points to an
* H5O_SHARED message. We use that information to look up the real
* message in the global heap.
*/
H5O_shared_t *shared;
void *tmp_buf, *tmp_mesg;
shared = (H5O_shared_t *)(oh->mesg[idx].native);
if (NULL==(tmp_buf = H5HG_read (ent->file, shared, NULL))) {
HGOTO_ERROR (H5E_OHDR, H5E_CANTLOAD, NULL,
"unable to read shared message from global heap");
}
tmp_mesg = (type->decode)(ent->file, tmp_buf, shared);
tmp_buf = H5MM_xfree (tmp_buf);
if (!tmp_mesg) {
HGOTO_ERROR (H5E_OHDR, H5E_CANTLOAD, NULL,
"unable to decode object header shared message");
}
if (mesg) {
HDmemcpy (mesg, tmp_mesg, type->native_size);
H5MM_xfree (tmp_mesg);
} else {
ret_value = tmp_mesg;
}
} else {
/*
* The message is not shared, but rather exists in the object
* header. The object header caches the native message (along with
* the raw message) so we must copy the native message before
* returning.
*/
if (NULL==(ret_value = (type->copy) (oh->mesg[idx].native, mesg))) {
HGOTO_ERROR (H5E_OHDR, H5E_CANTINIT, NULL,
"unable to copy message to user space");
}
}
done:
if (H5AC_unprotect(ent->file, H5AC_OHDR, &(ent->header), oh) < 0) {
HRETURN_ERROR(H5E_OHDR, H5E_PROTECT, NULL,
"unable to release object header");
}
oh = NULL;
FUNC_LEAVE(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5O_find_in_ohdr
*
* Purpose: Find a message in the object header without consulting
* a symbol table entry.
*
* Return: Success: Index number of message.
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 6 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static intn
H5O_find_in_ohdr(H5F_t *f, const haddr_t *addr, const H5O_class_t **type_p,
intn sequence)
{
H5O_t *oh = NULL;
int i;
const H5O_class_t *type = NULL;
FUNC_ENTER(H5O_find_in_ohdr, FAIL);
/* Check args */
assert(f);
assert(addr && H5F_addr_defined(addr));
assert(type_p);
/* Load the object header */
if (NULL == (oh = H5AC_find(f, H5AC_OHDR, addr, NULL, NULL))) {
HRETURN_ERROR(H5E_OHDR, H5E_CANTLOAD, FAIL,
"unable to load object header");
}
/* Scan through the messages looking for the right one */
for (i = 0; i < oh->nmesgs; i++) {
if (*type_p && (*type_p)->id != oh->mesg[i].type->id) continue;
if (--sequence < 0) break;
}
if (sequence >= 0) {
HRETURN_ERROR(H5E_OHDR, H5E_NOTFOUND, FAIL,
"unable to find object header message");
}
/*
* Decode the message if necessary. If the message is shared then decode
* a shared message, ignoring the message type.
*/
if (oh->mesg[i].flags & H5O_FLAG_SHARED) {
type = H5O_SHARED;
} else {
type = oh->mesg[i].type;
}
if (NULL == oh->mesg[i].native) {
assert(type->decode);
oh->mesg[i].native = (type->decode) (f, oh->mesg[i].raw, NULL);
if (NULL == oh->mesg[i].native) {
HRETURN_ERROR(H5E_OHDR, H5E_CANTDECODE, FAIL,
"unable to decode message");
}
}
/*
* Return the message type. If this is a shared message then return the
* pointed-to type.
*/
*type_p = oh->mesg[i].type;
FUNC_LEAVE(i);
}
/*-------------------------------------------------------------------------
* Function: H5O_modify
*
* Purpose: Modifies an existing message or creates a new message.
* The cache fields in that symbol table entry ENT are *not*
* updated, you must do that separately because they often
* depend on multiple object header messages. Besides, we
* don't know which messages will be constant and which will
* not.
*
* The OVERWRITE argument is either a sequence number of a
* message to overwrite (usually zero) or the constant
* H5O_NEW_MESG (-1) to indicate that a new message is to
* be created. If the message to overwrite doesn't exist then
* it is created (but only if it can be inserted so its sequence
* number is OVERWRITE; that is, you can create a message with
* the sequence number 5 if there is no message with sequence
* number 4).
*
* Return: Success: The sequence number of the message that
* was modified or created.
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 6 1997
*
* Modifications:
*
* Robb Matzke, 7 Jan 1998
* Handles constant vs non-constant messages. Once a message is made
* constant it can never become non-constant. Constant messages cannot
* be modified.
*
*-------------------------------------------------------------------------
*/
intn
H5O_modify(H5G_entry_t *ent, const H5O_class_t *type, intn overwrite,
uintn flags, const void *mesg)
{
H5O_t *oh = NULL;
intn idx, sequence;
intn ret_value = FAIL;
size_t size = 0;
H5O_shared_t *sh_mesg = NULL;
FUNC_ENTER(H5O_modify, FAIL);
/* check args */
assert(ent);
assert(ent->file);
assert(H5F_addr_defined(&(ent->header)));
assert(type);
assert(mesg);
assert (0==(flags & ~H5O_FLAG_BITS));
if (0==(ent->file->intent & H5F_ACC_RDWR)) {
HGOTO_ERROR (H5E_OHDR, H5E_WRITEERROR, FAIL,
"no write intent on file");
}
if (NULL == (oh = H5AC_protect(ent->file, H5AC_OHDR, &(ent->header),
NULL, NULL))) {
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, FAIL,
"unable to load object header");
}
/* Count similar messages */
for (idx = 0, sequence = -1; idx < oh->nmesgs; idx++) {
if (type->id != oh->mesg[idx].type->id) continue;
if (++sequence == overwrite) break;
}
/* Was the right message found? */
if (overwrite >= 0 &&
(idx >= oh->nmesgs || sequence != overwrite)) {
/* But can we insert a new one with this sequence number? */
if (overwrite == sequence + 1) {
overwrite = -1;
} else {
HGOTO_ERROR(H5E_OHDR, H5E_NOTFOUND, FAIL, "message not found");
}
}
if (overwrite < 0) {
/* Allocate space for the new message */
if (flags & H5O_FLAG_SHARED) {
if (NULL==type->share) {
HGOTO_ERROR (H5E_OHDR, H5E_UNSUPPORTED, FAIL,
"message class is not sharable");
}
sh_mesg = H5MM_xcalloc (1, sizeof *sh_mesg);
if ((type->share)(ent->file, mesg, sh_mesg/*out*/)<0) {
/*
* If the message isn't shared then turn off the shared bit
* and treat it as an unshared message.
*/
H5E_clear ();
flags &= ~H5O_FLAG_SHARED;
H5MM_xfree (sh_mesg);
} else {
if (H5HG_link (ent->file, sh_mesg, 1)<0) {
HGOTO_ERROR (H5E_OHDR, H5E_LINK, FAIL,
"unable to adjust shared object link count");
}
size = (H5O_SHARED->raw_size)(ent->file, sh_mesg);
}
}
if (0==(flags & H5O_FLAG_SHARED)) {
size = (type->raw_size) (ent->file, mesg);
}
size = H5O_ALIGN(size);
idx = H5O_alloc(ent->file, oh, type, size);
if (idx < 0) {
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL,
"unable to allocate space for message");
}
sequence++;
} else if (oh->mesg[idx].flags & H5O_FLAG_CONSTANT) {
HGOTO_ERROR(H5E_OHDR, H5E_WRITEERROR, FAIL,
"unable to modify constant message");
} else if (oh->mesg[idx].flags & H5O_FLAG_SHARED) {
HGOTO_ERROR (H5E_OHDR, H5E_WRITEERROR, FAIL,
"unable to modify shared (constant) message");
}
/* Copy the native value into the object header */
if (flags & H5O_FLAG_SHARED) {
oh->mesg[idx].native = sh_mesg;
} else {
if (oh->mesg[idx].native) {
H5O_reset (oh->mesg[idx].type, oh->mesg[idx].native);
}
oh->mesg[idx].native = (type->copy) (mesg, oh->mesg[idx].native);
if (NULL == oh->mesg[idx].native) {
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL,
"unable to copy message to object header");
}
}
oh->mesg[idx].flags = flags;
oh->mesg[idx].dirty = TRUE;
oh->dirty = TRUE;
ret_value = sequence;
done:
if (oh && H5AC_unprotect(ent->file, H5AC_OHDR, &(ent->header), oh) < 0) {
HRETURN_ERROR(H5E_OHDR, H5E_PROTECT, FAIL,
"unable to release object header");
}
FUNC_LEAVE(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5O_remove
*
* Purpose: Removes the specified message from the object header.
* If sequence is H5O_ALL (-1) then all messages of the
* specified type are removed. Removing a message causes
* the sequence numbers to change for subsequent messages of
* the same type.
*
* No attempt is made to join adjacent free areas of the
* object header into a single larger free area.
*
* Return: Success: SUCCEED
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 28 1997
*
* Modifications:
*
* Robb Matzke, 7 Jan 1998
* Does not remove constant messages.
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_remove(H5G_entry_t *ent, const H5O_class_t *type, intn sequence)
{
H5O_t *oh = NULL;
intn i, seq, nfailed = 0;
herr_t ret_value = FAIL;
H5O_shared_t *sh_mesg = NULL;
FUNC_ENTER(H5O_remove, FAIL);
/* check args */
assert(ent);
assert(ent->file);
assert(H5F_addr_defined(&(ent->header)));
assert(type);
if (0==(ent->file->intent & H5F_ACC_RDWR)) {
HRETURN_ERROR (H5E_HEAP, H5E_WRITEERROR, FAIL,
"no write intent on file");
}
/* load the object header */
if (NULL == (oh = H5AC_protect(ent->file, H5AC_OHDR, &(ent->header),
NULL, NULL))) {
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, FAIL,
"unable to load object header");
}
for (i = seq = 0; i < oh->nmesgs; i++) {
if (type->id != oh->mesg[i].type->id) continue;
if (seq++ == sequence || H5O_ALL == sequence) {
/*
* Keep track of how many times we failed trying to remove constant
* messages.
*/
if (oh->mesg[i].flags & H5O_FLAG_CONSTANT) {
nfailed++;
continue;
}
if (oh->mesg[i].flags & H5O_FLAG_SHARED) {
if (NULL==oh->mesg[i].native) {
sh_mesg = (H5O_SHARED->decode)(ent->file, oh->mesg[i].raw,
NULL);
if (NULL==(oh->mesg[i].native = sh_mesg)) {
HGOTO_ERROR (H5E_OHDR, H5E_CANTDECODE, FAIL,
"unable to decode shared message info");
}
}
if (H5HG_link (ent->file, sh_mesg, -1)<0) {
HGOTO_ERROR (H5E_OHDR, H5E_LINK, FAIL,
"unable to decrement link count on shared "
"message");
}
}
/* change message type to nil and zero it */
oh->mesg[i].type = H5O_NULL;
HDmemset(oh->mesg[i].raw, 0, oh->mesg[i].raw_size);
H5O_reset(type, oh->mesg[i].native);
oh->mesg[i].native = H5MM_xfree(oh->mesg[i].native);
oh->mesg[i].dirty = TRUE;
oh->dirty = TRUE;
}
}
/* Fail if we tried to remove any constant messages */
if (nfailed) {
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL,
"unable to remove constant message(s)");
}
ret_value = SUCCEED;
done:
if (oh && H5AC_unprotect(ent->file, H5AC_OHDR, &(ent->header), oh) < 0) {
HRETURN_ERROR(H5E_OHDR, H5E_PROTECT, FAIL,
"unable to release object header");
}
FUNC_LEAVE(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5O_alloc_extend_chunk
*
* Purpose: Extends a chunk which hasn't been allocated on disk yet
* to make the chunk large enough to contain a message whose
* data size is at least SIZE bytes.
*
* If the last message of the chunk is the null message, then
* that message will be extended with the chunk. Otherwise a
* new null message is created.
*
* Return: Success: Message index for null message which
* is large enough to hold SIZE bytes.
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 7 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static intn
H5O_alloc_extend_chunk(H5O_t *oh, intn chunkno, size_t size)
{
intn idx, i;
size_t delta;
uint8 *old_addr;
FUNC_ENTER(H5O_alloc_extend_chunk, FAIL);
/* check args */
assert(oh);
assert(chunkno >= 0 && chunkno < oh->nchunks);
assert(size > 0);
assert (size==H5O_ALIGN (size));
if (H5F_addr_defined(&(oh->chunk[chunkno].addr))) {
HRETURN_ERROR(H5E_OHDR, H5E_NOSPACE, FAIL, "chunk is on disk");
}
/* try to extend a null message */
for (idx=0; idx<oh->nmesgs; idx++) {
if (H5O_NULL_ID == oh->mesg[idx].type->id &&
(oh->mesg[idx].raw + oh->mesg[idx].raw_size ==
oh->chunk[chunkno].image + oh->chunk[chunkno].size)) {
delta = MAX (H5O_MIN_SIZE, size - oh->mesg[idx].raw_size);
assert (delta=H5O_ALIGN (delta));
oh->mesg[idx].dirty = TRUE;
oh->mesg[idx].raw_size += delta;
old_addr = oh->chunk[chunkno].image;
/* Be careful not to indroduce garbage */
oh->chunk[chunkno].image = H5MM_xrealloc(old_addr,
(oh->chunk[chunkno].size +
delta));
HDmemset(oh->chunk[chunkno].image + oh->chunk[chunkno].size,
0, delta);
oh->chunk[chunkno].size += delta;
/* adjust raw addresses for messages of this chunk */
if (old_addr != oh->chunk[chunkno].image) {
for (i = 0; i < oh->nmesgs; i++) {
if (oh->mesg[i].chunkno == chunkno) {
oh->mesg[i].raw = oh->chunk[chunkno].image +
(oh->mesg[i].raw - old_addr);
}
}
}
HRETURN(idx);
}
}
/* create a new null message */
if (oh->nmesgs >= oh->alloc_nmesgs) {
oh->alloc_nmesgs += H5O_NMESGS;
oh->mesg = H5MM_xrealloc(oh->mesg,
oh->alloc_nmesgs * sizeof(H5O_mesg_t));
}
delta = MAX(H5O_MIN_SIZE, size+H5O_SIZEOF_MSGHDR(f));
delta = H5O_ALIGN(delta);
idx = oh->nmesgs++;
oh->mesg[idx].type = H5O_NULL;
oh->mesg[idx].dirty = TRUE;
oh->mesg[idx].native = NULL;
oh->mesg[idx].raw = oh->chunk[chunkno].image +
oh->chunk[chunkno].size +
H5O_SIZEOF_MSGHDR(f);
oh->mesg[idx].raw_size = delta - H5O_SIZEOF_MSGHDR(f);
oh->mesg[idx].chunkno = chunkno;
old_addr = oh->chunk[chunkno].image;
oh->chunk[chunkno].size += delta;
oh->chunk[chunkno].image = H5MM_xrealloc(old_addr,
oh->chunk[chunkno].size);
/* adjust raw addresses for messages of this chunk */
if (old_addr != oh->chunk[chunkno].image) {
for (i = 0; i < oh->nmesgs; i++) {
if (oh->mesg[i].chunkno == chunkno) {
oh->mesg[i].raw = oh->chunk[chunkno].image +
(oh->mesg[i].raw - old_addr);
}
}
}
FUNC_LEAVE(idx);
}
/*-------------------------------------------------------------------------
* Function: H5O_alloc_new_chunk
*
* Purpose: Allocates a new chunk for the object header but doen't
* give the new chunk a file address yet. One of the other
* chunks will get an object continuation message. If there
* isn't room in any other chunk for the object continuation
* message, then some message from another chunk is moved into
* this chunk to make room.
*
* Return: Success: Index number of the null message for the
* new chunk. The null message will be at
* least SIZE bytes not counting the message
* ID or size fields.
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 7 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static intn
H5O_alloc_new_chunk(H5F_t *f, H5O_t *oh, size_t size)
{
size_t cont_size; /*continuation message size */
intn found_null = (-1); /*best fit null message */
intn found_other = (-1); /*best fit other message */
intn idx = FAIL; /*message number return value */
uint8 *p = NULL; /*ptr into new chunk */
H5O_cont_t *cont = NULL; /*native continuation message */
intn i, chunkno;
FUNC_ENTER(H5O_alloc_new_chunk, FAIL);
/* check args */
assert (oh);
assert (size > 0);
assert (size == H5O_ALIGN (size));
/*
* Find the smallest null message that will hold an object
* continuation message. Failing that, find the smallest message
* that could be moved to make room for the continuation message.
* Don't ever move continuation message from one chunk to another.
*/
cont_size = H5O_ALIGN (H5F_SIZEOF_ADDR(f) + H5F_SIZEOF_SIZE(f));
for (i=0; i<oh->nmesgs; i++) {
if (H5O_NULL_ID == oh->mesg[i].type->id) {
if (cont_size == oh->mesg[i].raw_size) {
found_null = i;
break;
} else if (oh->mesg[i].raw_size >= cont_size &&
(found_null < 0 ||
(oh->mesg[i].raw_size <
oh->mesg[found_null].raw_size))) {
found_null = i;
}
} else if (H5O_CONT_ID == oh->mesg[i].type->id) {
/*don't consider continuation messages */
} else if (oh->mesg[i].raw_size >= cont_size &&
(found_other < 0 ||
oh->mesg[i].raw_size < oh->mesg[found_other].raw_size)) {
found_other = i;
}
}
assert(found_null >= 0 || found_other >= 0);
/*
* If we must move some other message to make room for the null
* message, then make sure the new chunk has enough room for that
* other message.
*/
if (found_null < 0)
size += H5O_SIZEOF_MSGHDR(f) + oh->mesg[found_other].raw_size;
/*
* The total chunk size must include the requested space plus enough
* for the message header. This must be at least some minimum and a
* multiple of the alignment size.
*/
size = MAX(H5O_MIN_SIZE, size + H5O_SIZEOF_MSGHDR(f));
assert (size == H5O_ALIGN (size));
/*
* Create the new chunk without giving it a file address.
*/
if (oh->nchunks >= oh->alloc_nchunks) {
oh->alloc_nchunks += H5O_NCHUNKS;
oh->chunk = H5MM_xrealloc(oh->chunk,
oh->alloc_nchunks * sizeof(H5O_chunk_t));
}
chunkno = oh->nchunks++;
oh->chunk[chunkno].dirty = TRUE;
H5F_addr_undef(&(oh->chunk[chunkno].addr));
oh->chunk[chunkno].size = size;
oh->chunk[chunkno].image = p = H5MM_xcalloc(1, size);
/*
* Make sure we have enough space for all possible new messages
* that could be generated below.
*/
if (oh->nmesgs + 3 > oh->alloc_nmesgs) {
int old_alloc=oh->alloc_nmesgs;
oh->alloc_nmesgs += MAX(H5O_NMESGS, 3);
oh->mesg = H5MM_xrealloc(oh->mesg,
oh->alloc_nmesgs * sizeof(H5O_mesg_t));
/* Set new object header info to zeros */
HDmemset(&oh->mesg[old_alloc],0,(oh->alloc_nmesgs-old_alloc)*sizeof(H5O_mesg_t));
}
/*
* Describe the messages of the new chunk.
*/
if (found_null < 0) {
found_null = i = oh->nmesgs++;
oh->mesg[i].type = H5O_NULL;
oh->mesg[i].dirty = TRUE;
oh->mesg[i].native = NULL;
oh->mesg[i].raw = oh->mesg[found_other].raw;
oh->mesg[i].raw_size = oh->mesg[found_other].raw_size;
oh->mesg[i].chunkno = oh->mesg[found_other].chunkno;
oh->mesg[found_other].dirty = TRUE;
oh->mesg[found_other].raw = p + H5O_SIZEOF_MSGHDR(f);
oh->mesg[found_other].chunkno = chunkno;
p += H5O_SIZEOF_MSGHDR(f) + oh->mesg[found_other].raw_size;
size -= H5O_SIZEOF_MSGHDR(f) + oh->mesg[found_other].raw_size;
}
idx = oh->nmesgs++;
oh->mesg[idx].type = H5O_NULL;
oh->mesg[idx].dirty = TRUE;
oh->mesg[idx].native = NULL;
oh->mesg[idx].raw = p + H5O_SIZEOF_MSGHDR(f);
oh->mesg[idx].raw_size = size - H5O_SIZEOF_MSGHDR(f);
oh->mesg[idx].chunkno = chunkno;
/*
* If the null message that will receive the continuation message
* is larger than the continuation message, then split it into
* two null messages.
*/
if (oh->mesg[found_null].raw_size > cont_size) {
i = oh->nmesgs++;
oh->mesg[i].type = H5O_NULL;
oh->mesg[i].dirty = TRUE;
oh->mesg[i].native = NULL;
oh->mesg[i].raw = oh->mesg[found_null].raw +
cont_size +
H5O_SIZEOF_MSGHDR(f);
oh->mesg[i].raw_size = oh->mesg[found_null].raw_size -
(cont_size + H5O_SIZEOF_MSGHDR(f));
oh->mesg[i].chunkno = oh->mesg[found_null].chunkno;
oh->mesg[found_null].dirty = TRUE;
oh->mesg[found_null].raw_size = cont_size;
}
/*
* Initialize the continuation message.
*/
oh->mesg[found_null].type = H5O_CONT;
oh->mesg[found_null].dirty = TRUE;
cont = H5MM_xcalloc(1, sizeof(H5O_cont_t));
H5F_addr_undef(&(cont->addr));
cont->size = 0;
cont->chunkno = chunkno;
oh->mesg[found_null].native = cont;
FUNC_LEAVE(idx);
}
/*-------------------------------------------------------------------------
* Function: H5O_alloc
*
* Purpose: Allocate enough space in the object header for this message.
*
* Return: Success: Index of message
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 6 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static intn
H5O_alloc(H5F_t *f, H5O_t *oh, const H5O_class_t *type, size_t size)
{
intn chunkno;
intn idx;
intn null_idx;
FUNC_ENTER(H5O_alloc, FAIL);
/* check args */
assert (oh);
assert (type);
assert (size == H5O_ALIGN (size));
/* look for a null message which is large enough */
for (idx = 0; idx < oh->nmesgs; idx++) {
if (H5O_NULL_ID == oh->mesg[idx].type->id &&
oh->mesg[idx].raw_size >= size)
break;
}
#ifdef LATER
/*
* Perhaps if we join adjacent null messages we could make one
* large enough... we leave this as an exercise for future
* programmers :-) This isn't a high priority because when an
* object header is read from disk the null messages are combined
* anyway.
*/
#endif
/* if we didn't find one, then allocate more header space */
if (idx >= oh->nmesgs) {
/*
* Look for a chunk which hasn't had disk space allocated yet
* since we can just increase the size of that chunk.
*/
for (chunkno = 0; chunkno < oh->nchunks; chunkno++) {
if ((idx = H5O_alloc_extend_chunk(oh, chunkno, size)) >= 0) {
break;
}
H5E_clear();
}
/*
* Create a new chunk
*/
if (idx < 0) {
if ((idx = H5O_alloc_new_chunk(f, oh, size)) < 0) {
HRETURN_ERROR(H5E_OHDR, H5E_NOSPACE, FAIL,
"unable to create a new object header data chunk");
}
}
}
/* do we need to split the null message? */
if (oh->mesg[idx].raw_size > size) {
assert(oh->mesg[idx].raw_size - size >= H5O_SIZEOF_MSGHDR(f));
if (oh->nmesgs >= oh->alloc_nmesgs) {
int old_alloc=oh->alloc_nmesgs;
oh->alloc_nmesgs += H5O_NMESGS;
oh->mesg = H5MM_xrealloc(oh->mesg,
oh->alloc_nmesgs * sizeof(H5O_mesg_t));
/* Set new object header info to zeros */
HDmemset(&oh->mesg[old_alloc],0,
(oh->alloc_nmesgs-old_alloc)*sizeof(H5O_mesg_t));
}
null_idx = oh->nmesgs++;
oh->mesg[null_idx].type = H5O_NULL;
oh->mesg[null_idx].dirty = TRUE;
oh->mesg[null_idx].native = NULL;
oh->mesg[null_idx].raw = oh->mesg[idx].raw +
size +
H5O_SIZEOF_MSGHDR(f);
oh->mesg[null_idx].raw_size = oh->mesg[idx].raw_size -
(size + H5O_SIZEOF_MSGHDR(f));
oh->mesg[null_idx].chunkno = oh->mesg[idx].chunkno;
oh->mesg[idx].raw_size = size;
}
/* initialize the new message */
oh->mesg[idx].type = type;
oh->mesg[idx].dirty = TRUE;
oh->mesg[idx].native = NULL;
oh->dirty = TRUE;
FUNC_LEAVE(idx);
}
/*-------------------------------------------------------------------------
* Function: H5O_share
*
* Purpose: Writes a message to the global heap.
*
* Return: Success: SUCCEED, and HOBJ describes the global heap
* object.
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* Thursday, April 2, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_share (H5F_t *f, const H5O_class_t *type, const void *mesg,
H5HG_t *hobj/*out*/)
{
size_t size;
void *buf = NULL;
herr_t ret_value = FAIL;
FUNC_ENTER (H5O_share, FAIL);
/* Check args */
assert (f);
assert (type);
assert (mesg);
assert (hobj);
/* Encode the message put it in the global heap */
if ((size = (type->raw_size)(f, mesg))>0) {
buf = H5MM_xmalloc (size);
if ((type->encode)(f, buf, mesg)<0) {
HGOTO_ERROR (H5E_OHDR, H5E_CANTENCODE, FAIL,
"unable to encode message");
}
if (H5HG_insert (f, size, buf, hobj)<0) {
HGOTO_ERROR (H5E_OHDR, H5E_CANTINIT, FAIL,
"unable to store message in global heap");
}
}
ret_value = SUCCEED;
done:
H5MM_xfree (buf);
FUNC_LEAVE (ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5O_debug
*
* Purpose: Prints debugging info about an object header.
*
* Return: Success: SUCCEED
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 6 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5O_debug(H5F_t *f, const haddr_t *addr, FILE * stream, intn indent,
intn fwidth)
{
H5O_t *oh = NULL;
intn i, chunkno;
size_t mesg_total = 0, chunk_total = 0;
int *sequence;
haddr_t tmp_addr;
herr_t ret_value = FAIL;
void *(*decode)(H5F_t*, const uint8*, H5HG_t*);
herr_t (*debug)(H5F_t*, const void*, FILE*, intn, intn)=NULL;
FUNC_ENTER(H5O_debug, FAIL);
/* check args */
assert(f);
assert(addr && H5F_addr_defined(addr));
assert(stream);
assert(indent >= 0);
assert(fwidth >= 0);
if (NULL == (oh = H5AC_protect(f, H5AC_OHDR, addr, NULL, NULL))) {
HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, FAIL,
"unable to load object header");
}
/* debug */
fprintf(stream, "%*sObject Header...\n", indent, "");
fprintf(stream, "%*s%-*s %d\n", indent, "", fwidth,
"Dirty:",
(int) (oh->dirty));
fprintf(stream, "%*s%-*s %d\n", indent, "", fwidth,
"Version:",
(int) (oh->version));
fprintf(stream, "%*s%-*s %d\n", indent, "", fwidth,
"Number of links:",
(int) (oh->nlink));
fprintf(stream, "%*s%-*s %d (%d)\n", indent, "", fwidth,
"Number of messages (allocated):",
(int) (oh->nmesgs), (int) (oh->alloc_nmesgs));
fprintf(stream, "%*s%-*s %d (%d)\n", indent, "", fwidth,
"Number of chunks (allocated):",
(int) (oh->nchunks), (int) (oh->alloc_nchunks));
/* debug each chunk */
for (i=0, chunk_total=0; i<oh->nchunks; i++) {
chunk_total += oh->chunk[i].size;
fprintf(stream, "%*sChunk %d...\n", indent, "", i);
fprintf(stream, "%*s%-*s %d\n", indent + 3, "", MAX(0, fwidth - 3),
"Dirty:",
(int) (oh->chunk[i].dirty));
fprintf(stream, "%*s%-*s ", indent + 3, "", MAX(0, fwidth - 3),
"Address:");
H5F_addr_print(stream, &(oh->chunk[i].addr));
fprintf(stream, "\n");
tmp_addr = *addr;
H5F_addr_inc(&tmp_addr, (hsize_t)H5O_SIZEOF_HDR(f));
if (0 == i && H5F_addr_ne(&(oh->chunk[i].addr), &tmp_addr)) {
fprintf(stream, "*** WRONG ADDRESS!\n");
}
fprintf(stream, "%*s%-*s %lu\n", indent + 3, "", MAX(0, fwidth - 3),
"Size in bytes:",
(unsigned long) (oh->chunk[i].size));
}
/* debug each message */
sequence = H5MM_xcalloc(NELMTS(message_type_g), sizeof(int));
for (i=0, mesg_total=0; i<oh->nmesgs; i++) {
mesg_total += H5O_SIZEOF_MSGHDR(f) + oh->mesg[i].raw_size;
fprintf(stream, "%*sMessage %d...\n", indent, "", i);
/* check for bad message id */
if (oh->mesg[i].type->id < 0 ||
oh->mesg[i].type->id >= (intn)NELMTS(message_type_g)) {
fprintf(stream, "*** BAD MESSAGE ID 0x%04x\n",
oh->mesg[i].type->id);
continue;
}
/* message name and size */
fprintf(stream, "%*s%-*s 0x%04x %s(%d)\n",
indent + 3, "", MAX(0, fwidth - 3),
"Message ID:",
(unsigned) (oh->mesg[i].type->id),
oh->mesg[i].type->name,
sequence[oh->mesg[i].type->id]++);
fprintf (stream, "%*s%-*s %s\n", indent+3, "", MAX (0, fwidth-3),
"Shared message:",
(oh->mesg[i].flags & H5O_FLAG_SHARED) ? "Yes" : "No");
fprintf(stream, "%*s%-*s %s\n", indent + 3, "", MAX(0, fwidth - 3),
"Constant:",
(oh->mesg[i].flags & H5O_FLAG_CONSTANT) ? "Yes" : "No");
if (oh->mesg[i].flags & ~H5O_FLAG_BITS) {
fprintf (stream, "%*s%-*s 0x%02x\n", indent+3,"",MAX(0,fwidth-3),
"*** ADDITIONAL UNKNOWN FLAGS --->",
oh->mesg[i].flags & ~H5O_FLAG_BITS);
}
fprintf(stream, "%*s%-*s %lu bytes\n", indent+3, "", MAX(0,fwidth-3),
"Raw size in obj header:",
(unsigned long) (oh->mesg[i].raw_size));
fprintf(stream, "%*s%-*s %d\n", indent + 3, "", MAX(0, fwidth - 3),
"Chunk number:",
(int) (oh->mesg[i].chunkno));
chunkno = oh->mesg[i].chunkno;
if (chunkno < 0 || chunkno >= oh->nchunks) {
fprintf(stream, "*** BAD CHUNK NUMBER\n");
}
/* check the size */
if ((oh->mesg[i].raw + oh->mesg[i].raw_size >
oh->chunk[chunkno].image + oh->chunk[chunkno].size) ||
(oh->mesg[i].raw < oh->chunk[chunkno].image)) {
fprintf(stream, "*** BAD MESSAGE RAW ADDRESS\n");
}
/* decode the message */
if (NULL == oh->mesg[i].native && oh->mesg[i].type->decode) {
if (oh->mesg[i].flags & H5O_FLAG_SHARED) {
decode = H5O_SHARED->decode;
debug = H5O_SHARED->debug;
} else {
decode = oh->mesg[i].type->decode;
debug = oh->mesg[i].type->debug;
}
oh->mesg[i].native = (decode)(f, oh->mesg[i].raw, NULL);
} else {
debug = NULL;
}
/* print the message */
if (debug) {
(debug)(f, oh->mesg[i].native, stream, indent+3, MAX(0, fwidth-3));
} else {
fprintf(stream, "%*sNo info for this message.\n", indent + 3, "");
}
/* If the message is shared then also print the pointed-to message */
if (oh->mesg[i].flags & H5O_FLAG_SHARED) {
void *p = H5HG_read (f, oh->mesg[i].native, NULL);
void *mesg = (oh->mesg[i].type->decode)(f, p, oh->mesg[i].native);
if (oh->mesg[i].type->debug) {
(oh->mesg[i].type->debug)(f, mesg, stream, indent+3,
MAX (0, fwidth-3));
}
H5O_reset (oh->mesg[i].type, mesg);
H5MM_xfree (mesg);
H5MM_xfree (p);
}
}
sequence = H5MM_xfree(sequence);
if (mesg_total != chunk_total) {
fprintf(stream, "*** TOTAL SIZE DOES NOT MATCH ALLOCATED SIZE!\n");
}
ret_value = SUCCEED;
done:
if (oh && H5AC_unprotect(f, H5AC_OHDR, addr, oh) < 0) {
HRETURN_ERROR(H5E_OHDR, H5E_PROTECT, FAIL,
"unable to release object header");
}
FUNC_LEAVE(ret_value);
}
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