1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
#define H5A_FRIEND /*suppress error about including H5Apkg */
#include "H5Omodule.h" /* This source code file is part of the H5O module */
#define H5S_FRIEND /*suppress error about including H5Spkg */
#include "H5private.h" /* Generic Functions */
#include "H5Apkg.h" /* Attributes */
#include "H5Eprivate.h" /* Error handling */
#include "H5MMprivate.h" /* Memory management */
#include "H5Opkg.h" /* Object headers */
#include "H5Spkg.h" /* Dataspaces */
/* PRIVATE PROTOTYPES */
static herr_t H5O__attr_encode(H5F_t *f, uint8_t *p, const void *mesg);
static void *H5O__attr_decode(H5F_t *f, H5O_t *open_oh,
unsigned mesg_flags, unsigned *ioflags, size_t p_size, const uint8_t *p);
static void *H5O__attr_copy(const void *_mesg, void *_dest);
static size_t H5O__attr_size(const H5F_t *f, const void *_mesg);
static herr_t H5O__attr_free(void *mesg);
static herr_t H5O__attr_pre_copy_file(H5F_t *file_src, const void *mesg_src,
hbool_t *deleted, const H5O_copy_t *cpy_info, void *udata);
static void *H5O__attr_copy_file(H5F_t *file_src, const H5O_msg_class_t *mesg_type,
void *native_src, H5F_t *file_dst, hbool_t *recompute_size,
H5O_copy_t *cpy_info, void *udata);
static herr_t H5O__attr_post_copy_file(const H5O_loc_t *src_oloc,
const void *mesg_src, H5O_loc_t *dst_oloc, void *mesg_dst,
H5O_copy_t *cpy_info);
static herr_t H5O__attr_get_crt_index(const void *_mesg, H5O_msg_crt_idx_t *crt_idx);
static herr_t H5O__attr_set_crt_index(void *_mesg, H5O_msg_crt_idx_t crt_idx);
static herr_t H5O__attr_debug(H5F_t *f, const void *_mesg, FILE * stream,
int indent, int fwidth);
/* Set up & include shared message "interface" info */
#define H5O_SHARED_TYPE H5O_MSG_ATTR
#define H5O_SHARED_DECODE H5O__attr_shared_decode
#define H5O_SHARED_DECODE_REAL H5O__attr_decode
#define H5O_SHARED_ENCODE H5O__attr_shared_encode
#define H5O_SHARED_ENCODE_REAL H5O__attr_encode
#define H5O_SHARED_SIZE H5O__attr_shared_size
#define H5O_SHARED_SIZE_REAL H5O__attr_size
#define H5O_SHARED_DELETE H5O__attr_shared_delete
#define H5O_SHARED_DELETE_REAL H5O__attr_delete
#define H5O_SHARED_LINK H5O__attr_shared_link
#define H5O_SHARED_LINK_REAL H5O__attr_link
#define H5O_SHARED_COPY_FILE H5O__attr_shared_copy_file
#define H5O_SHARED_COPY_FILE_REAL H5O__attr_copy_file
#define H5O_SHARED_POST_COPY_FILE H5O__attr_shared_post_copy_file
#define H5O_SHARED_POST_COPY_FILE_REAL H5O__attr_post_copy_file
#undef H5O_SHARED_POST_COPY_FILE_UPD
#define H5O_SHARED_DEBUG H5O__attr_shared_debug
#define H5O_SHARED_DEBUG_REAL H5O__attr_debug
#include "H5Oshared.h" /* Shared Object Header Message Callbacks */
/* This message derives from H5O message class */
const H5O_msg_class_t H5O_MSG_ATTR[1] = {{
H5O_ATTR_ID, /* message id number */
"attribute", /* message name for debugging */
sizeof(H5A_t), /* native message size */
H5O_SHARE_IS_SHARABLE, /* messages are sharable? */
H5O__attr_shared_decode, /* decode message */
H5O__attr_shared_encode, /* encode message */
H5O__attr_copy, /* copy the native value */
H5O__attr_shared_size, /* size of raw message */
H5O__attr_reset, /* reset method */
H5O__attr_free, /* free method */
H5O__attr_shared_delete, /* file delete method */
H5O__attr_shared_link, /* link method */
NULL, /* set share method */
NULL, /* can share method */
H5O__attr_pre_copy_file, /* pre copy native value to file */
H5O__attr_shared_copy_file, /* copy native value to file */
H5O__attr_shared_post_copy_file, /* post copy native value to file */
H5O__attr_get_crt_index, /* get creation index */
H5O__attr_set_crt_index, /* set creation index */
H5O__attr_shared_debug /* debug the message */
}};
/* Flags for attribute flag encoding */
#define H5O_ATTR_FLAG_TYPE_SHARED 0x01
#define H5O_ATTR_FLAG_SPACE_SHARED 0x02
#define H5O_ATTR_FLAG_ALL 0x03
/* Declare external the free list for H5S_t's */
H5FL_EXTERN(H5S_t);
/* Declare external the free list for H5S_extent_t's */
H5FL_EXTERN(H5S_extent_t);
/*--------------------------------------------------------------------------
NAME
H5O__attr_decode
PURPOSE
Decode a attribute message and return a pointer to a memory struct
with the decoded information
USAGE
void *H5O__attr_decode(f, mesg_flags, p)
H5F_t *f; IN: pointer to the HDF5 file struct
H5O_t *open_oh; IN: pointer to the object header
unsigned mesg_flags; IN: message flags to influence decoding
unsigned *ioflags; IN/OUT: flags for decoding
size_t p_size; IN: size of buffer *p
const uint8_t *p; IN: the raw information buffer
RETURNS
Pointer to the new message in native order on success, NULL on failure
DESCRIPTION
This function decodes the "raw" disk form of a attribute message
into a struct in memory native format. The struct is allocated within this
function using malloc() and is returned to the caller.
--------------------------------------------------------------------------*/
static void *
H5O__attr_decode(H5F_t *f, H5O_t *open_oh, unsigned H5_ATTR_UNUSED mesg_flags,
unsigned *ioflags, size_t p_size, const uint8_t *p)
{
H5A_t *attr = NULL;
H5S_extent_t *extent; /*extent dimensionality information */
size_t name_len; /*attribute name length */
size_t dt_size; /* Datatype size */
hssize_t sds_size; /* Signed Dataspace size */
hsize_t ds_size; /* Dataspace size */
unsigned flags = 0; /* Attribute flags */
H5A_t *ret_value = NULL; /* Return value */
FUNC_ENTER_STATIC
/* check args */
HDassert(f);
HDassert(p);
if(NULL == (attr = H5FL_CALLOC(H5A_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
if(NULL == (attr->shared = H5FL_CALLOC(H5A_shared_t)))
HGOTO_ERROR(H5E_FILE, H5E_NOSPACE, NULL, "can't allocate shared attr structure")
/* Version number */
attr->shared->version = *p++;
if(attr->shared->version < H5O_ATTR_VERSION_1 || attr->shared->version > H5O_ATTR_VERSION_LATEST)
HGOTO_ERROR(H5E_ATTR, H5E_CANTLOAD, NULL, "bad version number for attribute message")
/* Get the flags byte if we have a later version of the attribute */
if(attr->shared->version >= H5O_ATTR_VERSION_2) {
flags = *p++;
/* Check for unknown flag */
if(flags & (unsigned)~H5O_ATTR_FLAG_ALL)
HGOTO_ERROR(H5E_ATTR, H5E_CANTLOAD, NULL, "unknown flag for attribute message")
} /* end if */
else
p++; /* Byte is unused when version<2 */
/*
* Decode the sizes of the parts of the attribute. The sizes stored in
* the file are exact but the parts are aligned on 8-byte boundaries.
*/
UINT16DECODE(p, name_len); /*including null*/
UINT16DECODE(p, attr->shared->dt_size);
UINT16DECODE(p, attr->shared->ds_size);
/*
* Decode the character encoding for the name for versions 3 or later,
* as well as some reserved bytes.
*/
if(attr->shared->version >= H5O_ATTR_VERSION_3)
attr->shared->encoding = (H5T_cset_t)*p++;
/* Decode and store the name */
if(NULL == (attr->shared->name = H5MM_strdup((const char *)p)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
/* Make an attempt to detect corrupted name or name length - HDFFV-10588 */
if(name_len != (HDstrlen(attr->shared->name) + 1))
HGOTO_ERROR(H5E_ATTR, H5E_CANTDECODE, NULL, "attribute name has different length than stored length")
if(attr->shared->version < H5O_ATTR_VERSION_2)
p += H5O_ALIGN_OLD(name_len); /* advance the memory pointer */
else
p += name_len; /* advance the memory pointer */
/* Decode the attribute's datatype */
if(NULL == (attr->shared->dt = (H5T_t *)(H5O_MSG_DTYPE->decode)(f, open_oh,
((flags & H5O_ATTR_FLAG_TYPE_SHARED) ? H5O_MSG_FLAG_SHARED : 0), ioflags, attr->shared->dt_size, p)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTDECODE, NULL, "can't decode attribute datatype")
if(attr->shared->version < H5O_ATTR_VERSION_2)
p += H5O_ALIGN_OLD(attr->shared->dt_size);
else
p += attr->shared->dt_size;
/* decode the attribute dataspace. It can be shared in versions >= 3
* What's actually shared, though, is only the extent.
*/
if(NULL == (attr->shared->ds = H5FL_CALLOC(H5S_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
/* Decode attribute's dataspace extent */
if((extent = (H5S_extent_t *)(H5O_MSG_SDSPACE->decode)(f, open_oh,
((flags & H5O_ATTR_FLAG_SPACE_SHARED) ? H5O_MSG_FLAG_SHARED : 0), ioflags, attr->shared->ds_size, p)) == NULL)
HGOTO_ERROR(H5E_ATTR, H5E_CANTDECODE, NULL, "can't decode attribute dataspace")
/* Copy the extent information to the dataspace */
H5MM_memcpy(&(attr->shared->ds->extent), extent, sizeof(H5S_extent_t));
/* Release temporary extent information */
extent = H5FL_FREE(H5S_extent_t, extent);
/* Default to entire dataspace being selected */
if(H5S_select_all(attr->shared->ds, FALSE) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTSET, NULL, "unable to set all selection")
if(attr->shared->version < H5O_ATTR_VERSION_2)
p += H5O_ALIGN_OLD(attr->shared->ds_size);
else
p += attr->shared->ds_size;
/* Get the datatype's size */
if(0 == (dt_size = H5T_get_size(attr->shared->dt)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, NULL, "unable to get datatype size")
/* Get the datatype & dataspace sizes */
if(0 == (dt_size = H5T_get_size(attr->shared->dt)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, NULL, "unable to get datatype size")
if((sds_size = H5S_GET_EXTENT_NPOINTS(attr->shared->ds)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, NULL, "unable to get dataspace size")
ds_size = (hsize_t)sds_size;
/* Compute the size of the data */
H5_CHECKED_ASSIGN(attr->shared->data_size, size_t, ds_size * (hsize_t)dt_size, hsize_t);
/* Go get the data */
if(attr->shared->data_size) {
/* Ensure that data size doesn't exceed buffer size, in case of
it's being corrupted in the file */
if(attr->shared->data_size > p_size)
HGOTO_ERROR(H5E_RESOURCE, H5E_OVERFLOW, NULL, "data size exceeds buffer size")
if(NULL == (attr->shared->data = H5FL_BLK_MALLOC(attr_buf, attr->shared->data_size)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
H5MM_memcpy(attr->shared->data, p, attr->shared->data_size);
} /* end if */
/* Increment the reference count for this object header message in cache(compact
storage) or for the object from dense storage. */
attr->shared->nrefs++;
/* Set return value */
ret_value = attr;
done:
if(NULL == ret_value)
if(attr) {
/* Free any dynamically allocated items */
if(attr->shared)
if(H5A__shared_free(attr) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CANTRELEASE, NULL, "can't release attribute info")
attr = H5FL_FREE(H5A_t, attr);
} /* end if */
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O__attr_decode() */
/*--------------------------------------------------------------------------
NAME
H5O__attr_encode
PURPOSE
Encode a simple attribute message
USAGE
herr_t H5O__attr_encode(f, p, mesg)
H5F_t *f; IN: pointer to the HDF5 file struct
const uint8 *p; IN: the raw information buffer
const void *mesg; IN: Pointer to the simple datatype struct
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
This function encodes the native memory form of the attribute
message in the "raw" disk form.
--------------------------------------------------------------------------*/
static herr_t
H5O__attr_encode(H5F_t *f, uint8_t *p, const void *mesg)
{
const H5A_t *attr = (const H5A_t *) mesg;
size_t name_len; /* Attribute name length */
htri_t is_type_shared; /* Flag to indicate that a shared datatype is used for this attribute */
htri_t is_space_shared; /* Flag to indicate that a shared dataspace is used for this attribute */
unsigned flags = 0; /* Attribute flags */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_STATIC
/* check args */
HDassert(f);
HDassert(p);
HDassert(attr);
/* Check whether datatype and dataspace are shared */
if((is_type_shared = H5O_msg_is_shared(H5O_DTYPE_ID, attr->shared->dt)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_BADMESG, FAIL, "can't determine if datatype is shared")
if((is_space_shared = H5O_msg_is_shared(H5O_SDSPACE_ID, attr->shared->ds)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_BADMESG, FAIL, "can't determine if dataspace is shared")
/* Encode Version */
*p++ = attr->shared->version;
/* Set attribute flags if version >1 */
if(attr->shared->version >= H5O_ATTR_VERSION_2) {
flags = (is_type_shared ? H5O_ATTR_FLAG_TYPE_SHARED : 0 );
flags |= (is_space_shared ? H5O_ATTR_FLAG_SPACE_SHARED : 0);
*p++ = (uint8_t)flags; /* Set flags for attribute */
} /* end if */
else
*p++ = 0; /* Reserved, for version <2 */
/*
* Encode the lengths of the various parts of the attribute message. The
* encoded lengths are exact but we pad each part except the data to be a
* multiple of eight bytes (in the first version).
*/
name_len = HDstrlen(attr->shared->name) + 1;
UINT16ENCODE(p, name_len);
UINT16ENCODE(p, attr->shared->dt_size);
UINT16ENCODE(p, attr->shared->ds_size);
/* The character encoding for the attribute's name, in later versions */
if(attr->shared->version >= H5O_ATTR_VERSION_3)
*p++ = (uint8_t)attr->shared->encoding;
/* Write the name including null terminator */
H5MM_memcpy(p, attr->shared->name, name_len);
if(attr->shared->version < H5O_ATTR_VERSION_2) {
/* Pad to the correct number of bytes */
HDmemset(p + name_len, 0, H5O_ALIGN_OLD(name_len) - name_len);
p += H5O_ALIGN_OLD(name_len);
} /* end if */
else
p += name_len;
/* encode the attribute datatype */
if((H5O_MSG_DTYPE->encode)(f, FALSE, p, attr->shared->dt) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTENCODE, FAIL, "can't encode attribute datatype")
if(attr->shared->version < H5O_ATTR_VERSION_2) {
HDmemset(p + attr->shared->dt_size, 0, H5O_ALIGN_OLD(attr->shared->dt_size) - attr->shared->dt_size);
p += H5O_ALIGN_OLD(attr->shared->dt_size);
} /* end if */
else
p += attr->shared->dt_size;
/* encode the attribute dataspace */
if((H5O_MSG_SDSPACE->encode)(f, FALSE, p, &(attr->shared->ds->extent)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTENCODE, FAIL, "can't encode attribute dataspace")
if(attr->shared->version < H5O_ATTR_VERSION_2) {
HDmemset(p + attr->shared->ds_size, 0, H5O_ALIGN_OLD(attr->shared->ds_size) - attr->shared->ds_size);
p += H5O_ALIGN_OLD(attr->shared->ds_size);
} /* end if */
else
p += attr->shared->ds_size;
/* Store attribute data. If there's no data, store 0 as fill value. */
if(attr->shared->data)
H5MM_memcpy(p, attr->shared->data, attr->shared->data_size);
else
HDmemset(p, 0, attr->shared->data_size);
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5O__attr_encode() */
/*--------------------------------------------------------------------------
NAME
H5O__attr_copy
PURPOSE
Copies a message from MESG to DEST, allocating DEST if necessary.
USAGE
void *H5O__attr_copy(mesg, dest)
const void *mesg; IN: Pointer to the source attribute struct
const void *dest; IN: Pointer to the destination attribute struct
RETURNS
Pointer to DEST on success, NULL on failure
DESCRIPTION
This function copies a native (memory) attribute message,
allocating the destination structure if necessary.
--------------------------------------------------------------------------*/
static void *
H5O__attr_copy(const void *_src, void *_dst)
{
void *ret_value = NULL; /* Return value */
FUNC_ENTER_STATIC
/* check args */
HDassert(_src);
/* copy */
if(NULL == (ret_value = (H5A_t *)H5A__copy((H5A_t *)_dst, (const H5A_t *)_src)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTINIT, NULL, "can't copy attribute")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O__attr_copy() */
/*--------------------------------------------------------------------------
NAME
H5O__attr_size
PURPOSE
Return the raw message size in bytes
USAGE
size_t H5O__attr_size(f, mesg)
H5F_t *f; IN: pointer to the HDF5 file struct
const void *mesg; IN: Pointer to the source attribute struct
RETURNS
Size of message on success, 0 on failure
DESCRIPTION
This function returns the size of the raw attribute message on
success. (Not counting the message type or size fields, only the data
portion of the message). It doesn't take into account alignment.
--------------------------------------------------------------------------*/
static size_t
H5O__attr_size(const H5F_t H5_ATTR_UNUSED *f, const void *_mesg)
{
const H5A_t *attr = (const H5A_t *)_mesg;
size_t name_len;
size_t ret_value = 0;
FUNC_ENTER_STATIC_NOERR
HDassert(attr);
/* Common size information */
ret_value = 1 + /*version */
1 + /*reserved/flags */
2 + /*name size inc. null */
2 + /*type size */
2; /*space size */
/* Length of attribute name */
name_len = HDstrlen(attr->shared->name) + 1;
/* Version-specific size information */
if(attr->shared->version == H5O_ATTR_VERSION_1)
ret_value += H5O_ALIGN_OLD(name_len) + /*attribute name */
H5O_ALIGN_OLD(attr->shared->dt_size) + /*datatype */
H5O_ALIGN_OLD(attr->shared->ds_size) + /*dataspace */
attr->shared->data_size; /*the data itself */
else if(attr->shared->version == H5O_ATTR_VERSION_2)
ret_value += name_len + /*attribute name */
attr->shared->dt_size + /*datatype */
attr->shared->ds_size + /*dataspace */
attr->shared->data_size; /*the data itself */
else if(attr->shared->version == H5O_ATTR_VERSION_3)
ret_value += 1 + /*character encoding */
name_len + /*attribute name */
attr->shared->dt_size + /*datatype */
attr->shared->ds_size + /*dataspace */
attr->shared->data_size; /*the data itself */
else
HDassert(0 && "Bad attribute version");
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O__attr_size() */
/*-------------------------------------------------------------------------
* Function: H5O__attr_reset
*
* Purpose: Frees resources within a attribute message, but doesn't free
* the message itself.
*
* Return: SUCCEED/FAIL
*
* Programmer: Robb Matzke
* Tuesday, December 9, 1997
*
*-------------------------------------------------------------------------
*/
herr_t
H5O__attr_reset(void H5_ATTR_UNUSED *_mesg)
{
FUNC_ENTER_PACKAGE_NOERR
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5O__attr_reset() */
/*-------------------------------------------------------------------------
* Function: H5O__attr_free
*
* Purpose: Frees the message
*
* Return: SUCCEED/FAIL
*
* Programmer: Quincey Koziol
* Thursday, November 18, 2004
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O__attr_free(void *mesg)
{
H5A_t *attr = (H5A_t *)mesg;
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_STATIC
HDassert(mesg);
if(H5A__close(attr) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTCLOSEOBJ, FAIL, "unable to close attribute object")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O__attr_free() */
/*-------------------------------------------------------------------------
* Function: H5O__attr_delete
*
* Purpose: Free file space referenced by message
*
* Return: SUCCEED/FAIL
*
* Programmer: Quincey Koziol
* Friday, September 26, 2003
*
*-------------------------------------------------------------------------
*/
herr_t
H5O__attr_delete(H5F_t *f, H5O_t *oh, void *_mesg)
{
H5A_t *attr = (H5A_t *) _mesg;
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT
/* check args */
HDassert(f);
HDassert(attr);
/* Decrement reference count on datatype in file */
if((H5O_MSG_DTYPE->del)(f, oh, attr->shared->dt) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_LINKCOUNT, FAIL, "unable to adjust datatype link count")
/* Decrement reference count on dataspace in file */
if((H5O_MSG_SDSPACE->del)(f, oh, attr->shared->ds) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_LINKCOUNT, FAIL, "unable to adjust dataspace link count")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O__attr_delete() */
/*-------------------------------------------------------------------------
* Function: H5O__attr_link
*
* Purpose: Increment reference count on any objects referenced by
* message
*
* Return: SUCCEED/FAIL
*
* Programmer: Quincey Koziol
* Friday, September 26, 2003
*
*-------------------------------------------------------------------------
*/
herr_t
H5O__attr_link(H5F_t *f, H5O_t *oh, void *_mesg)
{
H5A_t *attr = (H5A_t *) _mesg;
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_PACKAGE
/* check args */
HDassert(f);
HDassert(attr);
/* Re-share attribute's datatype and dataspace to increment their
* reference count if they're shared.
* Otherwise they may be deleted when the attribute
* message is deleted.
*/
/* Increment reference count on datatype & dataspace in file */
if((H5O_MSG_DTYPE->link)(f, oh, attr->shared->dt) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_LINKCOUNT, FAIL, "unable to adjust datatype link count")
if((H5O_MSG_SDSPACE->link)(f, oh, attr->shared->ds) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_LINKCOUNT, FAIL, "unable to adjust dataspace link count")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O__attr_link() */
/*-------------------------------------------------------------------------
* Function: H5O__attr_pre_copy_file
*
* Purpose: Perform any necessary actions before copying message between
* files for attribute messages.
*
* Return: SUCCEED/FAIL
*
* Programmer: Quincey Koziol
* Monday, June 26, 2006
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O__attr_pre_copy_file(H5F_t H5_ATTR_UNUSED *file_src, const void *native_src,
hbool_t *deleted, const H5O_copy_t *cpy_info, void H5_ATTR_UNUSED *udata)
{
const H5A_t *attr_src = (const H5A_t *)native_src; /* Source attribute */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_STATIC
/* check args */
HDassert(deleted);
HDassert(cpy_info);
HDassert(cpy_info->file_dst);
/* Check to ensure that the version of the message to be copied does not exceed
* the message version allowed by the destination file's high bound.
*/
if(attr_src->shared->version > H5O_attr_ver_bounds[H5F_HIGH_BOUND(cpy_info->file_dst)])
HGOTO_ERROR(H5E_OHDR, H5E_BADRANGE, FAIL, "attribute message version out of bounds")
/* If we are not copying attributes into the destination file, indicate
* that this message should be deleted.
*/
if(cpy_info->copy_without_attr)
*deleted = TRUE;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O__attr_pre_copy_file() */
/*-------------------------------------------------------------------------
* Function: H5O__attr_copy_file
*
* Purpose: Copies a message from _MESG to _DEST in file
*
* Return: Success: Ptr to _DEST
* Failure: NULL
*
* Programmer: Quincey Koziol
* November 1, 2005
*
*-------------------------------------------------------------------------
*/
static void *
H5O__attr_copy_file(H5F_t *file_src, const H5O_msg_class_t H5_ATTR_UNUSED *mesg_type,
void *native_src, H5F_t *file_dst, hbool_t *recompute_size,
H5O_copy_t *cpy_info, void H5_ATTR_UNUSED *udata)
{
void *ret_value = NULL; /* Return value */
FUNC_ENTER_STATIC
/* check args */
HDassert(native_src);
HDassert(file_dst);
HDassert(cpy_info);
HDassert(!cpy_info->copy_without_attr);
/* Mark datatype as being on disk now. This step used to be done in a lower level
* by H5O_dtype_decode. But it has been moved up. Not an ideal place, but no better
* place than here. */
if(H5T_set_loc(((H5A_t *)native_src)->shared->dt, H5F_VOL_OBJ(file_src), H5T_LOC_DISK) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTINIT, NULL, "invalid datatype location")
if(NULL == (ret_value = H5A__attr_copy_file((H5A_t *)native_src, file_dst, recompute_size, cpy_info)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTCOPY, NULL, "can't copy attribute")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5O__attr_copy_file() */
/*-------------------------------------------------------------------------
* Function: H5O__attr_post_copy_file
*
* Purpose: Finish copying a message from between files.
* We have to copy the values of a reference attribute in the
* post copy because H5O_post_copy_file() fails at the case that
* an object may have a reference attribute that points to the
* object itself.
*
* Return: SUCCEED/FAIL
*
* Programmer: Peter Cao
* March 6, 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O__attr_post_copy_file(const H5O_loc_t *src_oloc, const void *mesg_src,
H5O_loc_t *dst_oloc, void *mesg_dst, H5O_copy_t *cpy_info)
{
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_STATIC
if(H5A__attr_post_copy_file(src_oloc, (const H5A_t *)mesg_src, dst_oloc, (H5A_t *)mesg_dst, cpy_info) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTCOPY, FAIL, "can't copy attribute")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5O__attr_post_copy_file() */
/*-------------------------------------------------------------------------
* Function: H5O__attr_get_crt_index
*
* Purpose: Get creation index from the message
*
* Return: SUCCEED/FAIL
*
* Programmer: Quincey Koziol
* Thursday, January 18, 2007
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O__attr_get_crt_index(const void *_mesg, H5O_msg_crt_idx_t *crt_idx /*out*/)
{
const H5A_t *attr = (const H5A_t *)_mesg;
FUNC_ENTER_STATIC_NOERR
HDassert(attr);
HDassert(crt_idx);
/* Get the attribute's creation index */
*crt_idx = attr->shared->crt_idx;
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5O__attr_get_crt_index() */
/*-------------------------------------------------------------------------
* Function: H5O__attr_set_crt_index
*
* Purpose: Set creation index from the message
*
* Return: SUCCEED/FAIL
*
* Programmer: Quincey Koziol
* Thursday, January 18, 2007
*
*-------------------------------------------------------------------------
*/
static herr_t
H5O__attr_set_crt_index(void *_mesg, H5O_msg_crt_idx_t crt_idx)
{
H5A_t *attr = (H5A_t *)_mesg;
FUNC_ENTER_STATIC_NOERR
HDassert(attr);
/* Set the creation index */
attr->shared->crt_idx = crt_idx;
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5O__attr_set_crt_index() */
/*--------------------------------------------------------------------------
NAME
H5O__attr_debug
PURPOSE
Prints debugging information for an attribute message
USAGE
void *H5O__attr_debug(f, mesg, stream, indent, fwidth)
H5F_t *f; IN: pointer to the HDF5 file struct
const void *mesg; IN: Pointer to the source attribute struct
FILE *stream; IN: Pointer to the stream for output data
int indent; IN: Amount to indent information by
int fwidth; IN: Field width (?)
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
This function prints debugging output to the stream passed as a
parameter.
--------------------------------------------------------------------------*/
static herr_t
H5O__attr_debug(H5F_t *f, const void *_mesg, FILE * stream, int indent, int fwidth)
{
const H5A_t *mesg = (const H5A_t *)_mesg;
const char *s; /* Temporary string pointer */
char buf[128]; /* Temporary string buffer */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_STATIC
/* check args */
HDassert(f);
HDassert(stream);
HDassert(indent >= 0);
HDassert(fwidth >= 0);
HDfprintf(stream, "%*s%-*s \"%s\"\n", indent, "", fwidth,
"Name:",
mesg->shared->name);
switch(mesg->shared->encoding) {
case H5T_CSET_ASCII:
s = "ASCII";
break;
case H5T_CSET_UTF8:
s = "UTF-8";
break;
case H5T_CSET_RESERVED_2:
case H5T_CSET_RESERVED_3:
case H5T_CSET_RESERVED_4:
case H5T_CSET_RESERVED_5:
case H5T_CSET_RESERVED_6:
case H5T_CSET_RESERVED_7:
case H5T_CSET_RESERVED_8:
case H5T_CSET_RESERVED_9:
case H5T_CSET_RESERVED_10:
case H5T_CSET_RESERVED_11:
case H5T_CSET_RESERVED_12:
case H5T_CSET_RESERVED_13:
case H5T_CSET_RESERVED_14:
case H5T_CSET_RESERVED_15:
HDsnprintf(buf, sizeof(buf), "H5T_CSET_RESERVED_%d", (int)(mesg->shared->encoding));
s = buf;
break;
case H5T_CSET_ERROR:
default:
HDsnprintf(buf, sizeof(buf), "Unknown character set: %d", (int)(mesg->shared->encoding));
s = buf;
break;
} /* end switch */
HDfprintf(stream, "%*s%-*s %s\n", indent, "", fwidth,
"Character Set of Name:",
s);
HDfprintf(stream, "%*s%-*s %s\n", indent, "", fwidth,
"Object opened:",
mesg->obj_opened ? "TRUE" : "FALSE");
HDfprintf(stream, "%*s%-*s %" PRIuHADDR "\n", indent, "", fwidth,
"Object:",
mesg->oloc.addr);
/* Check for attribute creation order index on the attribute */
if(mesg->shared->crt_idx != H5O_MAX_CRT_ORDER_IDX)
HDfprintf(stream, "%*s%-*s %u\n", indent, "", fwidth,
"Creation Index:",
(unsigned)mesg->shared->crt_idx);
HDfprintf(stream, "%*sDatatype...\n", indent, "");
HDfprintf(stream, "%*s%-*s %lu\n", indent + 3, "", MAX(0,fwidth - 3),
"Encoded Size:",
(unsigned long)(mesg->shared->dt_size));
if((H5O_MSG_DTYPE->debug)(f, mesg->shared->dt, stream, indent + 3, MAX(0, fwidth - 3)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_WRITEERROR, FAIL, "unable to display datatype message info")
HDfprintf(stream, "%*sDataspace...\n", indent, "");
HDfprintf(stream, "%*s%-*s %lu\n", indent + 3, "", MAX(0, fwidth - 3),
"Encoded Size:",
(unsigned long)(mesg->shared->ds_size));
if(H5S_debug(f, mesg->shared->ds, stream, indent + 3, MAX(0, fwidth - 3)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_WRITEERROR, FAIL, "unable to display dataspace message info")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O__attr_debug() */
|