1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://www.hdfgroup.org/licenses. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*-------------------------------------------------------------------------
*
* Created: H5Oprivate.h
* Aug 5 1997
* Robb Matzke
*
* Purpose: Object header private include file.
*
*-------------------------------------------------------------------------
*/
#ifndef _H5Oprivate_H
#define _H5Oprivate_H
/* Early typedefs to avoid circular dependencies */
typedef struct H5O_t H5O_t;
typedef struct H5O_fill_t H5O_fill_t;
/* Include the public header file for this API */
#include "H5Opublic.h" /* Object header functions */
/* Public headers needed by this file */
#include "H5Dpublic.h" /* Dataset functions */
#include "H5Lpublic.h" /* Link functions */
#include "H5Spublic.h" /* Dataspace functions */
/* Private headers needed by this file */
#include "H5private.h" /* Generic Functions */
#include "H5ACprivate.h" /* Metadata cache */
#include "H5Fprivate.h" /* File access */
#include "H5HGprivate.h" /* Global Heaps */
#include "H5SLprivate.h" /* Skip lists */
#include "H5Tprivate.h" /* Datatype functions */
#include "H5Zprivate.h" /* I/O pipeline filters */
/* Forward references of package typedefs */
typedef struct H5O_msg_class_t H5O_msg_class_t;
typedef struct H5O_mesg_t H5O_mesg_t;
/* Values used to create the shared message & attribute heaps */
/* (Note that these parameters have been tuned so that the resulting heap ID
* is exactly 8 bytes. This is an efficient size as it can be stored
* directly in an 8 byte integer in memory, think carefully before changing it.
* -QAK)
*/
#define H5O_FHEAP_MAN_WIDTH 4
#define H5O_FHEAP_MAN_START_BLOCK_SIZE 1024
#define H5O_FHEAP_MAN_MAX_DIRECT_SIZE (64 * 1024)
#define H5O_FHEAP_MAN_MAX_INDEX 40
#define H5O_FHEAP_MAN_START_ROOT_ROWS 1
#define H5O_FHEAP_CHECKSUM_DBLOCKS TRUE
#define H5O_FHEAP_MAX_MAN_SIZE (4 * 1024)
#define H5O_FHEAP_ID_LEN 8
/* Object header macros */
#define H5O_MESG_MAX_SIZE 65536 /*max obj header message size */
#define H5O_ALL (-1) /* Operate on all messages of type */
#define H5O_FIRST (-2) /* Operate on first message of type */
/* Flags needed when encoding messages */
#define H5O_MSG_NO_FLAGS_SET 0x00u
#define H5O_MSG_FLAG_CONSTANT 0x01u
#define H5O_MSG_FLAG_SHARED 0x02u
#define H5O_MSG_FLAG_DONTSHARE 0x04u
#define H5O_MSG_FLAG_FAIL_IF_UNKNOWN_AND_OPEN_FOR_WRITE 0x08u
#define H5O_MSG_FLAG_MARK_IF_UNKNOWN 0x10u
#define H5O_MSG_FLAG_WAS_UNKNOWN 0x20u
#define H5O_MSG_FLAG_SHAREABLE 0x40u
#define H5O_MSG_FLAG_FAIL_IF_UNKNOWN_ALWAYS 0x80u
#define H5O_MSG_FLAG_BITS \
(H5O_MSG_FLAG_CONSTANT | H5O_MSG_FLAG_SHARED | H5O_MSG_FLAG_DONTSHARE | \
H5O_MSG_FLAG_FAIL_IF_UNKNOWN_AND_OPEN_FOR_WRITE | H5O_MSG_FLAG_MARK_IF_UNKNOWN | \
H5O_MSG_FLAG_WAS_UNKNOWN | H5O_MSG_FLAG_SHAREABLE | H5O_MSG_FLAG_FAIL_IF_UNKNOWN_ALWAYS)
/* Flags for updating messages */
#define H5O_UPDATE_TIME 0x01u
#define H5O_UPDATE_FORCE 0x02u /* Force updating the message */
/* Hash value constants */
#define H5O_HASH_SIZE 32
/* Enable reading/writing "bogus" messages */
/* #define H5O_ENABLE_BOGUS */
/* ========= Object Creation properties ============ */
#define H5O_CRT_ATTR_MAX_COMPACT_NAME "max compact attr" /* Max. # of attributes to store compactly */
#define H5O_CRT_ATTR_MIN_DENSE_NAME "min dense attr" /* Min. # of attributes to store densely */
#define H5O_CRT_OHDR_FLAGS_NAME "object header flags" /* Object header flags */
#define H5O_CRT_PIPELINE_NAME "pline" /* Filter pipeline */
#define H5O_CRT_PIPELINE_DEF \
{ \
{0, NULL, H5O_NULL_ID, {{0, HADDR_UNDEF}}}, H5O_PLINE_VERSION_1, 0, 0, NULL \
}
#ifdef H5O_ENABLE_BOGUS
#define H5O_BOGUS_MSG_FLAGS_NAME "bogus msg flags" /* Flags for 'bogus' message */
#define H5O_BOGUS_MSG_FLAGS_SIZE sizeof(uint8_t)
/* bogus ID can be either (a) H5O_BOGUS_VALID_ID or (b) H5O_BOGUS_INVALID_ID */
#define H5O_BOGUS_MSG_ID_NAME "bogus msg id" /* ID for 'bogus' message */
#define H5O_BOGUS_MSG_ID_SIZE sizeof(unsigned)
#endif /* H5O_ENABLE_BOGUS */
#ifdef H5O_ENABLE_BAD_MESG_COUNT
#define H5O_BAD_MESG_COUNT_NAME "bad message count" /* Flag setting bad message count */
#define H5O_BAD_MESG_COUNT_SIZE sizeof(hbool_t)
#endif /* H5O_ENABLE_BAD_MESG_COUNT */
/* ========= Object Copy properties ============ */
#define H5O_CPY_OPTION_NAME "copy object" /* Copy options */
#define H5O_CPY_MERGE_COMM_DT_LIST_NAME \
"merge committed dtype list" /* List of datatype paths to search in the dest file for merging */
#define H5O_CPY_MCDT_SEARCH_CB_NAME \
"committed dtype list search" /* Callback function when the search for a matching committed datatype is \
complete */
/* If the module using this macro is allowed access to the private variables, access them directly */
#ifdef H5O_MODULE
#define H5O_OH_GET_ADDR(O) ((O)->chunk[0].addr)
#define H5O_OH_GET_VERSION(O) ((O)->version)
#define H5O_OH_GET_FLAGS(O) ((O)->flags)
#define H5O_OH_GET_MTIME(O) ((O)->mtime)
#else /* H5O_MODULE */
#define H5O_OH_GET_ADDR(O) (H5O_get_oh_addr(O))
#define H5O_OH_GET_VERSION(O) (H5O_get_oh_version(O))
#define H5O_OH_GET_FLAGS(O) (H5O_get_oh_flags(O))
#define H5O_OH_GET_MTIME(O) (H5O_get_oh_mtime(O))
#endif /* H5O_MODULE */
/* Set the fields in a shared message structure */
#define H5O_UPDATE_SHARED(SH_MESG, SH_TYPE, F, MSG_TYPE, CRT_IDX, OH_ADDR) \
{ \
(SH_MESG)->type = (SH_TYPE); \
(SH_MESG)->file = (F); \
(SH_MESG)->msg_type_id = (MSG_TYPE); \
(SH_MESG)->u.loc.index = (CRT_IDX); \
(SH_MESG)->u.loc.oh_addr = (OH_ADDR); \
} /* end block */
/* Fractal heap ID type for shared message & attribute heap IDs. */
typedef union {
uint8_t id[H5O_FHEAP_ID_LEN]; /* Buffer to hold ID, for encoding/decoding */
uint64_t val; /* Value, for quick comparisons */
} H5O_fheap_id_t;
/* The object location information for an object */
typedef struct H5O_loc_t {
H5F_t * file; /* File that object header is located within */
haddr_t addr; /* File address of object header */
hbool_t holding_file; /* True if this object header has incremented
* its file's count of open objects. */
} H5O_loc_t;
/* Typedef for linked list of datatype merge suggestions */
typedef struct H5O_copy_dtype_merge_list_t {
char * path; /* Path to datatype in destination file */
struct H5O_copy_dtype_merge_list_t *next; /* Next object in list */
} H5O_copy_dtype_merge_list_t;
/* Structure for callback property before searching the global list of committed datatypes at destination */
typedef struct H5O_mcdt_cb_info_t {
H5O_mcdt_search_cb_t func;
void * user_data;
} H5O_mcdt_cb_info_t;
/* Settings/flags for copying an object */
typedef struct H5O_copy_t {
hbool_t copy_shallow; /* Flag to perform shallow hierarchy copy */
hbool_t expand_soft_link; /* Flag to expand soft links */
hbool_t expand_ext_link; /* Flag to expand external links */
hbool_t expand_ref; /* Flag to expand object references */
hbool_t copy_without_attr; /* Flag to not copy attributes */
hbool_t preserve_null; /* Flag to not delete NULL messages */
hbool_t merge_comm_dt; /* Flag to merge committed datatypes in dest file */
H5O_copy_dtype_merge_list_t *dst_dt_suggestion_list; /* Suggestions for merging committed datatypes */
int curr_depth; /* Current depth in hierarchy copied */
int max_depth; /* Maximum depth in hierarchy to copy */
H5SL_t * map_list; /* Skip list to hold address mappings */
H5SL_t * dst_dt_list; /* Skip list to hold committed datatypes in dest file */
hbool_t dst_dt_list_complete; /* Whether the destination datatype list is complete (i.e. not only
populated with "suggestions" from H5Padd_merge_committed_dtype_path) */
H5O_t *oh_dst; /* The destination object header */
H5F_t *file_dst; /* The destination file pointer */
/* This is used in the pre_copy_file callback to obtain
the destination file's high bound. The high bound
is used to index into the corresponding message's
array of versions for doing version bounds check. */
void * shared_fo; /* The shared pointer for the src object */
H5O_mcdt_search_cb_t mcdt_cb; /* The callback to invoke before searching the global list of committed
datatypes at destination */
void *mcdt_ud; /* User data passed to callback */
hid_t lcpl_id; /* LCPL for callbacks' use */
} H5O_copy_t;
/* Header message IDs */
#define H5O_NULL_ID 0x0000 /* Null Message. */
#define H5O_SDSPACE_ID 0x0001 /* Dataspace Message. */
#define H5O_LINFO_ID 0x0002 /* Link info Message. */
#define H5O_DTYPE_ID 0x0003 /* Datatype Message. */
#define H5O_FILL_ID 0x0004 /* Fill Value Message. (Old) */
#define H5O_FILL_NEW_ID 0x0005 /* Fill Value Message. (New) */
#define H5O_LINK_ID 0x0006 /* Link Message. */
#define H5O_EFL_ID 0x0007 /* External File List Message */
#define H5O_LAYOUT_ID 0x0008 /* Data Layout Message. */
#define H5O_BOGUS_VALID_ID 0x0009 /* "Bogus valid" Message. */
#define H5O_GINFO_ID 0x000a /* Group info Message. */
#define H5O_PLINE_ID 0x000b /* Filter pipeline message. */
#define H5O_ATTR_ID 0x000c /* Attribute Message. */
#define H5O_NAME_ID 0x000d /* Object name message. */
#define H5O_MTIME_ID 0x000e /* Modification time message. (Old) */
#define H5O_SHMESG_ID 0x000f /* Shared message "SOHM" table. */
#define H5O_CONT_ID 0x0010 /* Object header continuation message. */
#define H5O_STAB_ID 0x0011 /* Symbol table message. */
#define H5O_MTIME_NEW_ID 0x0012 /* Modification time message. (New) */
#define H5O_BTREEK_ID 0x0013 /* v1 B-tree 'K' values message. */
#define H5O_DRVINFO_ID 0x0014 /* Driver info message. */
#define H5O_AINFO_ID 0x0015 /* Attribute info message. */
#define H5O_REFCOUNT_ID 0x0016 /* Reference count message. */
#define H5O_FSINFO_ID 0x0017 /* File space info message. */
#define H5O_MDCI_MSG_ID 0x0018 /* Metadata Cache Image Message */
#define H5O_UNKNOWN_ID 0x0019 /* Placeholder message ID for unknown message. */
/* (this should never exist in a file) */
/*
* Note: Must increment H5O_MSG_TYPES in H5Opkg.h and update H5O_msg_class_g
* in H5O.c when creating a new message type. Also bump the value of
* H5O_BOGUS_INVALID_ID, below, to be one greater than the value of
* H5O_UNKNOWN_ID, and re-run gen_bogus.c.
*
* (this should never exist in a file)
*/
#define H5O_BOGUS_INVALID_ID 0x001a /* "Bogus invalid" Message. */
/* Shared object message types.
* Shared objects can be committed, in which case the shared message contains
* the location of the object header that holds the message, or shared in the
* heap, in which case the shared message holds their heap ID.
*/
#define H5O_SHARE_TYPE_UNSHARED 0 /* Message is not shared */
#define H5O_SHARE_TYPE_SOHM 1 /* Message is stored in SOHM heap */
#define H5O_SHARE_TYPE_COMMITTED 2 /* Message is stored in another object header */
#define H5O_SHARE_TYPE_HERE 3 /* Message is stored in this object header, but is sharable */
/* Detect messages that aren't stored in message's object header */
#define H5O_IS_STORED_SHARED(T) \
((((T) == H5O_SHARE_TYPE_SOHM) || ((T) == H5O_SHARE_TYPE_COMMITTED)) ? TRUE : FALSE)
/* Detect shared messages that are "tracked" in some other location */
#define H5O_IS_TRACKED_SHARED(T) ((T) > 0)
/* Specify the object header address and index needed
* to locate a message in another object header.
*/
typedef struct H5O_mesg_loc_t {
H5O_msg_crt_idx_t index; /* index within object header */
haddr_t oh_addr; /* address of object header */
} H5O_mesg_loc_t;
/*
* Shared object header message info.
*
* (This structure is used in other messages that can be shared and will
* include a H5O_shared_t struct as the first field in their "native" type)
*/
typedef struct H5O_shared_t {
unsigned type; /* Type describing how message is shared */
H5F_t * file; /* File that message is located within */
unsigned msg_type_id; /* Message's type ID */
union {
H5O_mesg_loc_t loc; /* Object location info */
H5O_fheap_id_t heap_id; /* ID within the SOHM heap */
} u;
} H5O_shared_t;
/*
* Link Info Message.
* (Contains dynamic information about links in a group)
* (Data structure in memory)
* (if the fields in this struct are changed, remember to change the default
* link info structure in src/H5Gprivate.h - QAK)
* (if the fields in this struct are changed, also look at the code that
* creates intermediate groups in src/H5Gtraverse.c - QAK)
* (The "max. creation order" field is signed so that we might have an easy
* way to add links to the front of the creation ordering (with negative
* values) as well as the end of the creation ordering - QAK)
*/
typedef struct H5O_linfo_t {
/* Creation order info */
hbool_t track_corder; /* Are creation order values tracked on links? */
hbool_t index_corder; /* Are creation order values indexed on links? */
int64_t max_corder; /* Current max. creation order value for group */
haddr_t corder_bt2_addr; /* Address of v2 B-tree for indexing creation order values of links */
/* Storage management info */
hsize_t nlinks; /* Number of links in the group */
haddr_t fheap_addr; /* Address of fractal heap for storing "dense" links */
haddr_t name_bt2_addr; /* Address of v2 B-tree for indexing names of links */
} H5O_linfo_t;
/* Initial version of the "old" fill value information */
/* (It doesn't look like this value was ever used in the file -QAK) */
#define H5O_FILL_VERSION_1 1
/* Revised version of the "new" fill value information */
#define H5O_FILL_VERSION_2 2
/* Version of the "new" fill value information with smaller default format */
#define H5O_FILL_VERSION_3 3
/* The latest version of the format. Look through the 'encode', 'decode'
* and 'size' callback for places to change when updating this. */
#define H5O_FILL_VERSION_LATEST H5O_FILL_VERSION_3
/*
* Fill Value Message.
* (Data structure in memory for both "old" and "new" fill value messages)
*
* The fill value message is fill value plus space allocation time, fill value
* writing time, whether fill value is defined, and the location of the
* message if it's shared.
*/
struct H5O_fill_t {
H5O_shared_t sh_loc; /* Shared message info (must be first) */
unsigned version; /* Encoding version number */
H5T_t * type; /*type. Null implies same as dataset */
ssize_t size; /*number of bytes in the fill value */
void * buf; /*the fill value */
H5D_alloc_time_t alloc_time; /* time to allocate space */
H5D_fill_time_t fill_time; /* time to write fill value */
hbool_t fill_defined; /* whether fill value is defined */
};
/*
* Link message.
* (Data structure in memory)
*/
typedef struct H5O_link_hard_t {
haddr_t addr; /* Object header address */
} H5O_link_hard_t;
typedef struct H5O_link_soft_t {
char *name; /* Destination name */
} H5O_link_soft_t;
typedef struct H5O_link_ud_t {
void * udata; /* Opaque data supplied by the user */
size_t size; /* Size of udata */
} H5O_link_ud_t;
typedef struct H5O_link_t {
H5L_type_t type; /* Type of link */
hbool_t corder_valid; /* Creation order for link is valid (not stored) */
int64_t corder; /* Creation order for link (stored if it's valid) */
H5T_cset_t cset; /* Character set of link name */
char * name; /* Link name */
union {
H5O_link_hard_t hard; /* Information for hard links */
H5O_link_soft_t soft; /* Information for soft links */
H5O_link_ud_t ud; /* Information for user-defined links */
} u;
} H5O_link_t;
/*
* External File List Message
* (Data structure in memory)
*/
#define H5O_EFL_ALLOC 16 /*number of slots to alloc at once */
#define H5O_EFL_UNLIMITED H5F_UNLIMITED /*max possible file size */
typedef struct H5O_efl_entry_t {
size_t name_offset; /*offset of name within heap */
char * name; /*malloc'd name */
HDoff_t offset; /*offset of data within file */
hsize_t size; /*size allocated within file */
} H5O_efl_entry_t;
typedef struct H5O_efl_t {
haddr_t heap_addr; /*address of name heap */
size_t nalloc; /*number of slots allocated */
size_t nused; /*number of slots used */
H5O_efl_entry_t *slot; /*array of external file entries */
} H5O_efl_t;
/*
* Data Layout Message.
* (Data structure in file)
*/
#define H5O_LAYOUT_NDIMS (H5S_MAX_RANK + 1)
/* Flags for chunked layout feature encoding */
#define H5O_LAYOUT_CHUNK_DONT_FILTER_PARTIAL_BOUND_CHUNKS 0x01
#define H5O_LAYOUT_CHUNK_SINGLE_INDEX_WITH_FILTER 0x02
#define H5O_LAYOUT_ALL_CHUNK_FLAGS \
(H5O_LAYOUT_CHUNK_DONT_FILTER_PARTIAL_BOUND_CHUNKS | H5O_LAYOUT_CHUNK_SINGLE_INDEX_WITH_FILTER)
/* Version # of encoded virtual dataset global heap blocks */
#define H5O_LAYOUT_VDS_GH_ENC_VERS 0
/* Initial version of the layout information. Used when space is allocated */
#define H5O_LAYOUT_VERSION_1 1
/* This version added support for delaying allocation */
#define H5O_LAYOUT_VERSION_2 2
/* This version is revised to store just the information needed for each
* storage type, and to straighten out problems with contiguous layout's
* sizes (was encoding them as 4-byte values when they were really n-byte
* values (where n usually is 8)).
*/
#define H5O_LAYOUT_VERSION_3 3
/* This version adds different types of indices to chunked datasets, allows
* for larger chunk dimensions, stores chunk indices into their own
* message (the "layout index" message), adds features for compact/dense
* storage of elements and/or chunk records, adds features for abbreviating
* the storage used for partial chunks on boundaries, adds the virtual
* layout type, etc.
*/
#define H5O_LAYOUT_VERSION_4 4
/* The default version of the format. (Earlier versions had bugs) */
#define H5O_LAYOUT_VERSION_DEFAULT H5O_LAYOUT_VERSION_3
/* The latest version of the format. Look through the 'encode'
* and 'size' callbacks for places to change when updating this. */
#define H5O_LAYOUT_VERSION_LATEST H5O_LAYOUT_VERSION_4
/* Forward declaration of structs used below */
struct H5D_layout_ops_t; /* Defined in H5Dpkg.h */
struct H5D_chunk_ops_t; /* Defined in H5Dpkg.h */
typedef struct H5O_storage_contig_t {
haddr_t addr; /* File address of data */
hsize_t size; /* Size of data in bytes */
} H5O_storage_contig_t;
typedef struct H5O_storage_chunk_btree_t {
haddr_t dset_ohdr_addr; /* File address dataset's object header */
H5UC_t *shared; /* Ref-counted shared info for B-tree nodes */
} H5O_storage_chunk_btree_t;
/* Forward declaration of structs used below */
struct H5FA_t; /* Defined in H5FAprivate.h */
typedef struct H5O_storage_chunk_farray_t {
haddr_t dset_ohdr_addr; /* File address dataset's object header */
struct H5FA_t *fa; /* Pointer to fixed index array struct */
} H5O_storage_chunk_farray_t;
/* Forward declaration of structs used below */
struct H5EA_t; /* Defined in H5EAprivate.h */
typedef struct H5O_storage_chunk_earray_t {
haddr_t dset_ohdr_addr; /* File address dataset's object header */
struct H5EA_t *ea; /* Pointer to extensible index array struct */
} H5O_storage_chunk_earray_t;
/* Filtered info for single chunk index */
typedef struct H5O_storage_chunk_single_filt_t {
uint32_t nbytes; /* Size of chunk (in file) */
uint32_t filter_mask; /* Excluded filters for chunk */
} H5O_storage_chunk_single_filt_t;
/* Forward declaration of structs used below */
struct H5B2_t; /* Defined in H5B2pkg.h */
typedef struct H5O_storage_chunk_bt2_t {
haddr_t dset_ohdr_addr; /* File address dataset's object header */
struct H5B2_t *bt2; /* Pointer to b-tree 2 struct */
} H5O_storage_chunk_bt2_t;
typedef struct H5O_storage_chunk_t {
H5D_chunk_index_t idx_type; /* Type of chunk index */
haddr_t idx_addr; /* File address of chunk index */
const struct H5D_chunk_ops_t *ops; /* Pointer to chunked storage operations */
union {
H5O_storage_chunk_btree_t btree; /* Information for v1 B-tree index */
H5O_storage_chunk_bt2_t btree2; /* Information for v2 B-tree index */
H5O_storage_chunk_earray_t earray; /* Information for extensible array index */
H5O_storage_chunk_farray_t farray; /* Information for fixed array index */
H5O_storage_chunk_single_filt_t single; /* Information for single chunk w/ filters index */
} u;
} H5O_storage_chunk_t;
typedef struct H5O_storage_compact_t {
hbool_t dirty; /* Dirty flag for compact dataset */
size_t size; /* Size of buffer in bytes */
void * buf; /* Buffer for compact dataset */
} H5O_storage_compact_t;
typedef struct H5O_storage_virtual_srcdset_t {
/* Stored */
struct H5S_t *virtual_select; /* Selection in the virtual dataset that is mapped to source selection */
/* Not stored */
char * file_name; /* Source file name used for virtual dataset mapping */
char * dset_name; /* Source dataset name used for virtual dataset mapping */
struct H5S_t *clipped_source_select; /* Clipped version of source_select */
struct H5S_t *clipped_virtual_select; /* Clipped version of virtual_select */
struct H5D_t *dset; /* Source dataset */
hbool_t dset_exists; /* Whether the dataset exists (was opened successfully) */
/* Temporary - only used during I/O operation, NULL at all other times */
struct H5S_t *projected_mem_space; /* Selection within mem_space for this mapping */
} H5O_storage_virtual_srcdset_t;
typedef struct H5O_storage_virtual_name_seg_t {
char * name_segment; /* String for this name segment */
struct H5O_storage_virtual_name_seg_t *next; /* Next name segment */
} H5O_storage_virtual_name_seg_t;
typedef enum H5O_virtual_space_status_t {
H5O_VIRTUAL_STATUS_INVALID = 0, /* Space extent is invalid */
H5O_VIRTUAL_STATUS_SEL_BOUNDS, /* Space extent set to bounds of selection */
H5O_VIRTUAL_STATUS_USER, /* Space extent provided by application */
H5O_VIRTUAL_STATUS_CORRECT /* Space extent matches dataset */
} H5O_virtual_space_status_t;
typedef struct H5O_storage_virtual_ent_t {
/* Stored */
H5O_storage_virtual_srcdset_t source_dset; /* Information about the source dataset */
char * source_file_name; /* Original (unparsed) source file name */
char * source_dset_name; /* Original (unparsed) source dataset name */
struct H5S_t * source_select; /* Selection in the source dataset for mapping */
/* Not stored */
H5O_storage_virtual_srcdset_t *sub_dset; /* Array of sub-source dataset info structs */
size_t sub_dset_nalloc; /* Number of slots allocated in sub_dset */
size_t sub_dset_nused; /* Number of slots "used" in sub_dset - essentially the farthest sub dataset in the
extent */
size_t sub_dset_io_start; /* First element in sub_dset involved in current I/O op. Field has no meaning
and may be uninitialized at all other times */
size_t sub_dset_io_end; /* First element in sub_dset outside of current I/O op. Field has no meaning and
may be uninitialized at all other times */
H5O_storage_virtual_name_seg_t *parsed_source_file_name; /* Parsed version of source_dset.file_name */
size_t psfn_static_strlen; /* Length of parsed_source_file_name without block number substitutions */
size_t psfn_nsubs; /* Number of block number substitutions in parsed_source_file_name */
H5O_storage_virtual_name_seg_t *parsed_source_dset_name; /* Parsed version of source_dset.dset_name */
size_t psdn_static_strlen; /* Length of parsed_source_dset_name without block number substitutions */
size_t psdn_nsubs; /* Number of block number substitutions in parsed_source_dset_name */
int unlim_dim_source; /* Unlimited dimension in source_select */
int unlim_dim_virtual; /* Unlimited dimension in virtual_select */
hsize_t unlim_extent_source; /* Extent of unlimited dimension in source dset last time virtual_select was
patched to match selection */
hsize_t unlim_extent_virtual; /* Extent of unlimited dimension in virtual dset last time source_select was
patched to match selection */
hsize_t clip_size_virtual; /* Size selection would be clipped to in virtual selection, ignoring other
mappings, when source extent == unlim_extent_source */
hsize_t clip_size_source; /* Size selection would be clipped to in source selection when virtual extent ==
unlim_extent_virtual */
H5O_virtual_space_status_t source_space_status; /* Extent patching status of source_select */
H5O_virtual_space_status_t virtual_space_status; /* Extent patching status of virtual_select */
} H5O_storage_virtual_ent_t;
typedef struct H5O_storage_virtual_t {
/* Stored in message */
H5HG_t serial_list_hobjid; /* Global heap ID for the list of virtual mapping entries stored on disk */
/* Stored in heap */
size_t list_nused; /* Number of array elements used in list */
H5O_storage_virtual_ent_t *list; /* Array of virtual dataset mapping entries */
/* Not stored */
size_t list_nalloc; /* Number of slots allocated */
hsize_t
min_dims[H5S_MAX_RANK]; /* Minimum extent of VDS (maximum of all non-unlimited selection bounds) */
H5D_vds_view_t
view; /* Method for calculating the extent of the virtual dataset with unlimited selections */
hsize_t printf_gap; /* Maximum number of sequential missing source datasets before terminating the search
for more */
hid_t source_fapl; /* FAPL to use to open source files */
hid_t source_dapl; /* DAPL to use to open source datasets */
hbool_t init; /* Whether all information has been completely initialized */
} H5O_storage_virtual_t;
typedef struct H5O_storage_t {
H5D_layout_t type; /* Type of layout */
union {
H5O_storage_contig_t contig; /* Information for contiguous storage */
H5O_storage_chunk_t chunk; /* Information for chunked storage */
H5O_storage_compact_t compact; /* Information for compact storage */
H5O_storage_virtual_t virt; /* Information for virtual storage */
} u;
} H5O_storage_t;
typedef struct H5O_layout_chunk_farray_t {
/* Creation parameters for fixed array data structure */
struct {
uint8_t max_dblk_page_nelmts_bits; /* Log2(Max. # of elements in a data block page) -
i.e. # of bits needed to store max. # of elements
in a data block page */
} cparam;
} H5O_layout_chunk_farray_t;
typedef struct H5O_layout_chunk_earray_t {
/* Creation parameters for extensible array data structure */
struct {
uint8_t max_nelmts_bits; /* Log2(Max. # of elements in array) - i.e. # of bits needed to store max. #
of elements */
uint8_t idx_blk_elmts; /* # of elements to store in index block */
uint8_t data_blk_min_elmts; /* Min. # of elements per data block */
uint8_t sup_blk_min_data_ptrs; /* Min. # of data block pointers for a super block */
uint8_t max_dblk_page_nelmts_bits; /* Log2(Max. # of elements in data block page) - i.e. # of bits
needed to store max. # of elements in data block page */
} cparam;
unsigned unlim_dim; /* Rank of unlimited dimension for dataset */
uint32_t swizzled_dim[H5O_LAYOUT_NDIMS]; /* swizzled chunk dimensions */
hsize_t swizzled_down_chunks[H5O_LAYOUT_NDIMS]; /* swizzled "down" size of number of chunks in each
dimension */
hsize_t swizzled_max_down_chunks[H5O_LAYOUT_NDIMS]; /* swizzled max "down" size of number of chunks in
each dimension */
} H5O_layout_chunk_earray_t;
typedef struct H5O_layout_chunk_bt2_t {
/* Creation parameters for v2 B-tree data structure */
struct {
uint32_t node_size; /* Size of each node (in bytes) */
uint8_t split_percent; /* % full to split nodes */
uint8_t merge_percent; /* % full to merge nodes */
} cparam;
} H5O_layout_chunk_bt2_t;
typedef struct H5O_layout_chunk_t {
H5D_chunk_index_t idx_type; /* Type of chunk index */
uint8_t flags; /* Chunk layout flags */
unsigned ndims; /* Num dimensions in chunk */
uint32_t dim[H5O_LAYOUT_NDIMS]; /* Size of chunk in elements */
unsigned enc_bytes_per_dim; /* Encoded # of bytes for storing each chunk dimension */
uint32_t size; /* Size of chunk in bytes */
hsize_t nchunks; /* Number of chunks in dataset */
hsize_t max_nchunks; /* Max. number of chunks in dataset */
hsize_t chunks[H5O_LAYOUT_NDIMS]; /* # of chunks in each dataset dimension */
hsize_t max_chunks[H5O_LAYOUT_NDIMS]; /* # of chunks in each dataset's max. dimension */
hsize_t down_chunks[H5O_LAYOUT_NDIMS]; /* "down" size of number of chunks in each dimension */
hsize_t max_down_chunks[H5O_LAYOUT_NDIMS]; /* "down" size of number of chunks in each max dim */
union {
H5O_layout_chunk_farray_t farray; /* Information for fixed array index */
H5O_layout_chunk_earray_t earray; /* Information for extensible array index */
H5O_layout_chunk_bt2_t btree2; /* Information for v2 B-tree index */
} u;
} H5O_layout_chunk_t;
typedef struct H5O_layout_t {
H5D_layout_t type; /* Type of layout */
unsigned version; /* Version of message */
const struct H5D_layout_ops_t *ops; /* Pointer to data layout I/O operations */
union {
H5O_layout_chunk_t chunk; /* Information for chunked layout */
} u;
H5O_storage_t storage; /* Information for storing dataset elements */
} H5O_layout_t;
#ifdef H5O_ENABLE_BOGUS
/*
* "Bogus" Message.
* (Data structure in memory)
*/
#define H5O_BOGUS_VALUE 0xdeadbeef
typedef struct H5O_bogus_t {
H5O_shared_t sh_loc; /* Shared message info (must be first) */
unsigned u; /* Hold the bogus info */
} H5O_bogus_t;
#endif /* H5O_ENABLE_BOGUS */
/*
* Group info message.
* (Contains constant information about a group)
* (Data structure in memory)
* (if the fields in this struct are changed, remember to change the default
* group info structure in src/H5Gprivate.h - QAK)
*/
typedef struct H5O_ginfo_t {
/* "Old" format group info (not stored) */
uint32_t lheap_size_hint; /* Local heap size hint */
/* "New" format group info (stored) */
/* (storage management info) */
hbool_t store_link_phase_change; /* Whether to store the link phase change values */
uint16_t max_compact; /* Maximum # of compact links */
uint16_t min_dense; /* Minimum # of "dense" links */
/* (initial object header size info) */
hbool_t store_est_entry_info; /* Whether to store the est. entry values */
uint16_t est_num_entries; /* Estimated # of entries in group */
uint16_t est_name_len; /* Estimated length of entry name */
} H5O_ginfo_t;
/*
* Filter pipeline message.
* (Data structure in memory)
*/
/* The initial version of the format */
#define H5O_PLINE_VERSION_1 1
/* This version encodes the message fields more efficiently */
/* (Drops the reserved bytes, doesn't align the name and doesn't encode the
* filter name at all if it's a filter provided by the library)
*/
#define H5O_PLINE_VERSION_2 2
/* The latest version of the format. Look through the 'encode' and 'size'
* callbacks for places to change when updating this. */
#define H5O_PLINE_VERSION_LATEST H5O_PLINE_VERSION_2
typedef struct H5O_pline_t {
H5O_shared_t sh_loc; /* Shared message info (must be first) */
unsigned version; /* Encoding version number */
size_t nalloc; /*num elements in `filter' array */
size_t nused; /*num filters defined */
H5Z_filter_info_t *filter; /*array of filters */
} H5O_pline_t;
/*
* Object name message.
* (Data structure in memory)
*/
typedef struct H5O_name_t {
char *s; /*ptr to malloc'd memory */
} H5O_name_t;
/*
* Shared message table message
* Information about file-wide shared message table, stored in superblock
* extension
* (Data structure in memory)
*/
typedef struct H5O_shmesg_table_t {
haddr_t addr; /*file address of SOHM table */
unsigned version; /*SOHM table version number */
unsigned nindexes; /*number of indexes in the table */
} H5O_shmesg_table_t;
/*
* Object header continuation message.
* (Data structure in memory)
*/
typedef struct H5O_cont_t {
haddr_t addr; /*address of continuation block */
size_t size; /*size of continuation block */
/* the following field(s) do not appear on disk */
unsigned chunkno; /*chunk this mesg refers to */
} H5O_cont_t;
/*
* Symbol table message.
* (Data structure in memory)
*/
typedef struct H5O_stab_t {
haddr_t btree_addr; /*address of B-tree */
haddr_t heap_addr; /*address of name heap */
} H5O_stab_t;
/*
* v1 B-tree 'K' value message
* Information about file-wide non-default v1 B-tree 'K' values, stored in
* superblock extension
* (Data structure in memory)
*/
typedef struct H5O_btreek_t {
unsigned btree_k[H5B_NUM_BTREE_ID]; /* B-tree internal node 'K' values */
unsigned sym_leaf_k; /* Symbol table leaf node's 'K' value */
} H5O_btreek_t;
/*
* Driver info message
* Information about driver info, stored in superblock extension
* (Data structure in memory)
*/
typedef struct H5O_drvinfo_t {
/* Information for H5AC cache functions, _must_ be first field in structure */
H5AC_info_t cache_info;
char name[9]; /* Driver name */
size_t len; /* Length of encoded buffer */
uint8_t * buf; /* Buffer for encoded info */
} H5O_drvinfo_t;
/*
* Attribute Info Message.
* (Contains dynamic information about attributes on an object)
* (Data structure in memory)
*/
typedef struct H5O_ainfo_t {
/* Creation order info */
hbool_t track_corder; /* Are creation order values tracked on attributes? */
hbool_t index_corder; /* Are creation order values indexed on attributes? */
H5O_msg_crt_idx_t max_crt_idx; /* Maximum attribute creation index used */
haddr_t
corder_bt2_addr; /* Address of v2 B-tree for indexing creation order values of "dense" attributes */
/* Storage management info */
hsize_t nattrs; /* Number of attributes on the object */
haddr_t fheap_addr; /* Address of fractal heap for storing "dense" attributes */
haddr_t name_bt2_addr; /* Address of v2 B-tree for indexing names of "dense" attributes */
} H5O_ainfo_t;
/*
* Reference Count Message.
* (Data structure in memory)
*/
typedef uint32_t H5O_refcount_t; /* Contains # of links to object, if >1 */
/*
* "Unknown" Message.
* (Data structure in memory)
*/
typedef unsigned H5O_unknown_t; /* Original message type ID */
/* To indicate an invalid version for a message that does not exist yet for the release */
/* Message version is 1 byte so the value can be 0 to 255 */
#define H5O_INVALID_VERSION 256
/* The initial version of the fsinfo message: deprecated */
/* This version is mapped to version 1 from release 1.10.1 onwards */
#define H5O_FSINFO_VERSION_0 0
/* The latest version for fsinfo message */
#define H5O_FSINFO_VERSION_1 1
#define H5O_FSINFO_VERSION_LATEST H5O_FSINFO_VERSION_1
/*
* File space info Message.
* Contains file space management info and
* addresses of free space managers for file memory
* (Data structure in memory)
*/
typedef struct H5O_fsinfo_t {
unsigned version; /* Version number */
H5F_fspace_strategy_t strategy; /* File space strategy */
hbool_t persist; /* Persisting free-space or not */
hsize_t threshold; /* Free-space section threshold */
hsize_t page_size; /* For paged aggregation: file space page size */
size_t pgend_meta_thres; /* For paged aggregation: page end metadata threshold */
haddr_t eoa_pre_fsm_fsalloc; /* For paged aggregation: the eoa before free-space headers & sinfo */
haddr_t fs_addr[H5F_MEM_PAGE_NTYPES - 1]; /* 13 addresses of free-space managers */
/* For non-paged aggregation: only 6 addresses are used */
hbool_t mapped; /* Not stored */
/* Indicate the message is mapped from version 0 to version 1 */
} H5O_fsinfo_t;
/*
* Metadata Cache Image Message.
* Contains base address and length of the metadata cache image.
* (Data structure in memory)
*/
typedef struct H5O_mdci_t {
haddr_t addr; /* address of MDC image block */
hsize_t size; /* size of MDC image block */
} H5O_mdci_t;
/* Typedef for "application" iteration operations */
typedef herr_t (*H5O_operator_t)(const void *mesg /*in*/, unsigned idx, void *operator_data /*in,out*/);
/* Typedef for "internal library" iteration operations */
typedef herr_t (*H5O_lib_operator_t)(H5O_t *oh, H5O_mesg_t *mesg /*in,out*/, unsigned sequence,
unsigned *oh_modified /*out*/, void *operator_data /*in,out*/);
/* Some syntactic sugar to make the compiler happy with two different kinds of iterator callbacks */
typedef enum H5O_mesg_operator_type_t {
H5O_MESG_OP_APP, /* Application callback */
H5O_MESG_OP_LIB /* Library internal callback */
} H5O_mesg_operator_type_t;
#define H5O_MODIFY_CONDENSE 0x01
#define H5O_MODIFY 0x02
typedef struct {
H5O_mesg_operator_type_t op_type;
union {
H5O_operator_t app_op; /* Application callback for each message */
H5O_lib_operator_t lib_op; /* Library internal callback for each message */
} u;
} H5O_mesg_operator_t;
/* Typedef for abstract object creation */
typedef struct {
H5O_type_t obj_type; /* Type of object to create */
void * crt_info; /* Information for object creation callback */
void * new_obj; /* Pointer to new object created */
} H5O_obj_create_t;
/* Forward declarations for prototype arguments */
struct H5P_genplist_t;
/* Object header routines */
H5_DLL herr_t H5O_init(void);
H5_DLL herr_t H5O_create(H5F_t *f, size_t size_hint, size_t initial_rc, hid_t ocpl_id,
H5O_loc_t *loc /*out*/);
H5_DLL H5O_t *H5O__create_ohdr(H5F_t *f, hid_t ocpl_id);
H5_DLL herr_t H5O__apply_ohdr(H5F_t *f, H5O_t *oh, hid_t ocpl_id, size_t size_hint, size_t initial_rc,
H5O_loc_t *loc_out);
H5_DLL herr_t H5O_open(H5O_loc_t *loc);
H5_DLL herr_t H5O_close(H5O_loc_t *loc, hbool_t *file_closed /*out*/);
H5_DLL int H5O_link(const H5O_loc_t *loc, int adjust);
H5_DLL H5O_t *H5O_protect(const H5O_loc_t *loc, unsigned prot_flags, hbool_t pin_all_chunks);
H5_DLL H5O_t *H5O_pin(const H5O_loc_t *loc);
H5_DLL herr_t H5O_unpin(H5O_t *oh);
H5_DLL herr_t H5O_dec_rc_by_loc(const H5O_loc_t *loc);
H5_DLL herr_t H5O_unprotect(const H5O_loc_t *loc, H5O_t *oh, unsigned oh_flags);
H5_DLL herr_t H5O_touch(const H5O_loc_t *loc, hbool_t force);
H5_DLL herr_t H5O_touch_oh(H5F_t *f, H5O_t *oh, hbool_t force);
#ifdef H5O_ENABLE_BOGUS
H5_DLL herr_t H5O_bogus_oh(H5F_t *f, H5O_t *oh, unsigned mesg_id, unsigned mesg_flags);
#endif /* H5O_ENABLE_BOGUS */
H5_DLL herr_t H5O_delete(H5F_t *f, haddr_t addr);
H5_DLL herr_t H5O_get_hdr_info(const H5O_loc_t *oloc, H5O_hdr_info_t *hdr);
H5_DLL herr_t H5O_get_info(const H5O_loc_t *oloc, H5O_info_t *oinfo, unsigned fields);
H5_DLL herr_t H5O_obj_type(const H5O_loc_t *loc, H5O_type_t *obj_type);
H5_DLL herr_t H5O_get_create_plist(const H5O_loc_t *loc, struct H5P_genplist_t *oc_plist);
H5_DLL hid_t H5O_open_name(const H5G_loc_t *loc, const char *name, hbool_t app_ref);
H5_DLL herr_t H5O_get_nlinks(const H5O_loc_t *loc, hsize_t *nlinks);
H5_DLL void * H5O_obj_create(H5F_t *f, H5O_type_t obj_type, void *crt_info, H5G_loc_t *obj_loc);
H5_DLL haddr_t H5O_get_oh_addr(const H5O_t *oh);
H5_DLL uint8_t H5O_get_oh_flags(const H5O_t *oh);
H5_DLL time_t H5O_get_oh_mtime(const H5O_t *oh);
H5_DLL uint8_t H5O_get_oh_version(const H5O_t *oh);
H5_DLL herr_t H5O_get_rc_and_type(const H5O_loc_t *oloc, unsigned *rc, H5O_type_t *otype);
H5_DLL H5AC_proxy_entry_t *H5O_get_proxy(const H5O_t *oh);
/* Object header message routines */
H5_DLL herr_t H5O_msg_create(const H5O_loc_t *loc, unsigned type_id, unsigned mesg_flags,
unsigned update_flags, void *mesg);
H5_DLL herr_t H5O_msg_append_oh(H5F_t *f, H5O_t *oh, unsigned type_id, unsigned mesg_flags,
unsigned update_flags, void *mesg);
H5_DLL herr_t H5O_msg_write(const H5O_loc_t *loc, unsigned type_id, unsigned mesg_flags,
unsigned update_flags, void *mesg);
H5_DLL herr_t H5O_msg_write_oh(H5F_t *f, H5O_t *oh, unsigned type_id, unsigned mesg_flags,
unsigned update_flags, void *mesg);
H5_DLL void * H5O_msg_read(const H5O_loc_t *loc, unsigned type_id, void *mesg);
H5_DLL void * H5O_msg_read_oh(H5F_t *f, H5O_t *oh, unsigned type_id, void *mesg);
H5_DLL herr_t H5O_msg_reset(unsigned type_id, void *native);
H5_DLL void * H5O_msg_free(unsigned type_id, void *mesg);
H5_DLL void * H5O_msg_copy(unsigned type_id, const void *mesg, void *dst);
H5_DLL int H5O_msg_count(const H5O_loc_t *loc, unsigned type_id);
H5_DLL htri_t H5O_msg_exists(const H5O_loc_t *loc, unsigned type_id);
H5_DLL htri_t H5O_msg_exists_oh(const H5O_t *oh, unsigned type_id);
H5_DLL herr_t H5O_msg_remove(const H5O_loc_t *loc, unsigned type_id, int sequence, hbool_t adj_link);
H5_DLL herr_t H5O_msg_remove_op(const H5O_loc_t *loc, unsigned type_id, int sequence, H5O_operator_t op,
void *op_data, hbool_t adj_link);
H5_DLL herr_t H5O_msg_iterate(const H5O_loc_t *loc, unsigned type_id, const H5O_mesg_operator_t *op,
void *op_data);
H5_DLL size_t H5O_msg_raw_size(const H5F_t *f, unsigned type_id, hbool_t disable_shared, const void *mesg);
H5_DLL size_t H5O_msg_size_f(const H5F_t *f, hid_t ocpl_id, unsigned type_id, const void *mesg,
size_t extra_raw);
H5_DLL size_t H5O_msg_size_oh(const H5F_t *f, const H5O_t *oh, unsigned type_id, const void *mesg,
size_t extra_raw);
H5_DLL htri_t H5O_msg_is_shared(unsigned type_id, const void *mesg);
H5_DLL htri_t H5O_msg_can_share(unsigned type_id, const void *mesg);
H5_DLL htri_t H5O_msg_can_share_in_ohdr(unsigned type_id);
H5_DLL herr_t H5O_msg_set_share(unsigned type_id, const H5O_shared_t *share, void *mesg);
H5_DLL herr_t H5O_msg_reset_share(unsigned type_id, void *mesg);
H5_DLL herr_t H5O_msg_get_crt_index(unsigned type_id, const void *mesg, H5O_msg_crt_idx_t *crt_idx);
H5_DLL herr_t H5O_msg_encode(H5F_t *f, unsigned type_id, hbool_t disable_shared, unsigned char *buf,
const void *obj);
H5_DLL void * H5O_msg_decode(H5F_t *f, H5O_t *open_oh, unsigned type_id, size_t buf_size,
const unsigned char *buf);
H5_DLL herr_t H5O_msg_delete(H5F_t *f, H5O_t *open_oh, unsigned type_id, void *mesg);
H5_DLL herr_t H5O_msg_get_flags(const H5O_loc_t *loc, unsigned type_id, uint8_t *flags);
/* Object metadata flush/refresh routines */
H5_DLL herr_t H5O_flush_common(H5O_loc_t *oloc, hid_t obj_id);
H5_DLL herr_t H5O_refresh_metadata(hid_t oid, H5O_loc_t oloc);
H5_DLL herr_t H5O_refresh_metadata_reopen(hid_t oid, H5G_loc_t *obj_loc, hbool_t start_swmr);
/* Object copying routines */
H5_DLL herr_t H5O_copy_header_map(const H5O_loc_t *oloc_src, H5O_loc_t *oloc_dst /*out */,
H5O_copy_t *cpy_info, hbool_t inc_depth, H5O_type_t *obj_type,
void **udata);
H5_DLL herr_t H5O_copy_expand_ref(H5F_t *file_src, void *_src_ref, H5F_t *file_dst, void *_dst_ref,
size_t ref_count, H5R_type_t ref_type, H5O_copy_t *cpy_info);
/* Debugging routines */
H5_DLL herr_t H5O_debug_id(unsigned type_id, H5F_t *f, const void *mesg, FILE *stream, int indent,
int fwidth);
H5_DLL herr_t H5O_debug(H5F_t *f, haddr_t addr, FILE *stream, int indent, int fwidth);
/* These functions operate on object locations */
H5_DLL herr_t H5O_loc_reset(H5O_loc_t *loc);
H5_DLL herr_t H5O_loc_copy(H5O_loc_t *dst, H5O_loc_t *src, H5_copy_depth_t depth);
H5_DLL herr_t H5O_loc_copy_shallow(H5O_loc_t *dst, H5O_loc_t *src);
H5_DLL herr_t H5O_loc_copy_deep(H5O_loc_t *dst, const H5O_loc_t *src);
H5_DLL herr_t H5O_loc_hold_file(H5O_loc_t *loc);
H5_DLL herr_t H5O_loc_free(H5O_loc_t *loc);
H5_DLL H5O_loc_t *H5O_get_loc(hid_t id);
/* EFL operators */
H5_DLL hsize_t H5O_efl_total_size(H5O_efl_t *efl);
/* Fill value operators */
H5_DLL herr_t H5O_fill_reset_dyn(H5O_fill_t *fill);
H5_DLL herr_t H5O_fill_convert(H5O_fill_t *fill, H5T_t *type, hbool_t *fill_changed);
H5_DLL herr_t H5O_fill_set_version(H5F_t *f, H5O_fill_t *fill);
/* Link operators */
H5_DLL herr_t H5O_link_delete(H5F_t *f, H5O_t *open_oh, void *_mesg);
/* Filter pipeline operators */
H5_DLL herr_t H5O_pline_set_version(H5F_t *f, H5O_pline_t *pline);
/* Shared message operators */
H5_DLL herr_t H5O_set_shared(H5O_shared_t *dst, const H5O_shared_t *src);
#endif /* _H5Oprivate_H */
|