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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*-------------------------------------------------------------------------
*
* Created: H5Oprivate.h
* Aug 5 1997
* Robb Matzke <matzke@llnl.gov>
*
* Purpose: Object header private include file.
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
#ifndef _H5Oprivate_H
#define _H5Oprivate_H
#include "H5Opublic.h"
#include "H5Dpublic.h"
/* Private headers needed by this file */
#include "H5private.h"
#include "H5Fprivate.h"
#include "H5Gprivate.h"
#include "H5HGprivate.h"
#include "H5Rprivate.h"
#include "H5Spublic.h"
#include "H5Tprivate.h"
#include "H5Zprivate.h"
/*
* Align messages on 8-byte boundaries because we would like to copy the
* object header chunks directly into memory and operate on them there, even
* on 64-bit architectures. This allows us to reduce the number of disk I/O
* requests with a minimum amount of mem-to-mem copies.
*/
#define H5O_ALIGN(X) (8*(((X)+8-1)/8))
#define H5O_MIN_SIZE H5O_ALIGN(32) /*min obj header data size */
#define H5O_MAX_SIZE 65536 /*max obj header data size */
#define H5O_NMESGS 32 /*initial number of messages */
#define H5O_NCHUNKS 8 /*initial number of chunks */
#define H5O_NEW_MESG (-1) /*new message */
#define H5O_ALL (-1) /*delete all messages of type */
/* Flags which are part of a message */
#define H5O_FLAG_CONSTANT 0x01u
#define H5O_FLAG_SHARED 0x02u
#define H5O_FLAG_BITS 0x03u
#define H5O_VERSION 1
/*
* Size of object header header.
*/
#define H5O_SIZEOF_HDR(F) \
H5O_ALIGN(1 + /*version number */ \
1 + /*alignment */ \
2 + /*number of messages */ \
4 + /*reference count */ \
4) /*header data size */
/*
* Size of message header
*/
#define H5O_SIZEOF_MSGHDR(F) \
H5O_ALIGN(2 + /*message type */ \
2 + /*sizeof message data */ \
4) /*reserved */
struct H5O_shared_t;
typedef struct H5O_class_t {
int id; /*message type ID on disk */
const char *name; /*for debugging */
size_t native_size; /*size of native message */
void *(*decode)(H5F_t*, const uint8_t*, struct H5O_shared_t*);
herr_t (*encode)(H5F_t*, uint8_t*, const void*);
void *(*copy)(const void*, void*); /*copy native value */
size_t (*raw_size)(H5F_t*, const void*);/*sizeof raw val */
herr_t (*reset)(void *); /*free nested data structs */
herr_t (*free)(void *); /*free main data struct */
herr_t (*get_share)(H5F_t*, const void*, struct H5O_shared_t*);
herr_t (*set_share)(H5F_t*, void*, const struct H5O_shared_t*);
herr_t (*debug)(H5F_t*, const void*, FILE*, int, int);
} H5O_class_t;
typedef struct H5O_mesg_t {
const H5O_class_t *type; /*type of message */
hbool_t dirty; /*raw out of date wrt native */
uint8_t flags; /*message flags */
void *native; /*native format message */
uint8_t *raw; /*ptr to raw data */
size_t raw_size; /*size with alignment */
unsigned chunkno; /*chunk number for this mesg */
} H5O_mesg_t;
typedef struct H5O_chunk_t {
hbool_t dirty; /*dirty flag */
haddr_t addr; /*chunk file address */
size_t size; /*chunk size */
uint8_t *image; /*image of file */
} H5O_chunk_t;
typedef struct H5O_t {
H5AC_info_t cache_info; /* Information for H5AC cache functions, _must_ be */
/* first field in structure */
hbool_t dirty; /*out of data wrt disk */
int version; /*version number */
int nlink; /*link count */
unsigned nmesgs; /*number of messages */
unsigned alloc_nmesgs; /*number of message slots */
H5O_mesg_t *mesg; /*array of messages */
unsigned nchunks; /*number of chunks */
unsigned alloc_nchunks; /*chunks allocated */
H5O_chunk_t *chunk; /*array of chunks */
} H5O_t;
/*
* Null Message.
*/
#define H5O_NULL_ID 0x0000
H5_DLLVAR const H5O_class_t H5O_NULL[1];
/*
* Simple Data Space Message.
*/
#define H5O_SDSPACE_ID 0x0001
H5_DLLVAR const H5O_class_t H5O_SDSPACE[1];
/* operates on an H5S_t struct */
/*
* Data Type Message.
*/
#define H5O_DTYPE_ID 0x0003
H5_DLLVAR const H5O_class_t H5O_DTYPE[1];
/* operates on an H5T_t struct */
/*
* Old Fill Value Message.
*/
#define H5O_FILL_ID 0x0004
H5_DLLVAR const H5O_class_t H5O_FILL[1];
typedef struct H5O_fill_t {
H5T_t *type; /*type. Null implies same as dataset */
size_t size; /*number of bytes in the fill value */
void *buf; /*the fill value */
} H5O_fill_t;
/*
* New Fill Value Message. The new fill value message is fill value plus
* space allocation time and fill value writing time and whether fill
* value is defined.
*/
#define H5O_FILL_NEW_ID 0x0005
H5_DLLVAR const H5O_class_t H5O_FILL_NEW[1];
typedef struct H5O_fill_new_t {
H5T_t *type; /*type. Null implies same as dataset */
ssize_t size; /*number of bytes in the fill value */
void *buf; /*the fill value */
H5D_alloc_time_t alloc_time; /* time to allocate space */
H5D_fill_time_t fill_time; /* time to write fill value */
htri_t fill_defined; /* whether fill value is defined */
} H5O_fill_new_t;
/*
* External File List Message
*/
#define H5O_EFL_ID 0x0007 /*external file list id */
#define H5O_EFL_ALLOC 16 /*number of slots to alloc at once */
#define H5O_EFL_UNLIMITED H5F_UNLIMITED /*max possible file size */
H5_DLLVAR const H5O_class_t H5O_EFL[1];/*external file list class */
typedef struct H5O_efl_entry_t {
size_t name_offset; /*offset of name within heap */
char *name; /*malloc'd name */
off_t offset; /*offset of data within file */
hsize_t size; /*size allocated within file */
} H5O_efl_entry_t;
typedef struct H5O_efl_t {
haddr_t heap_addr; /*address of name heap */
int nalloc; /*number of slots allocated */
int nused; /*number of slots used */
H5O_efl_entry_t *slot; /*array of external file entries */
} H5O_efl_t;
/*
* Data Layout Message.
*/
#define H5O_LAYOUT_ID 0x0008
#define H5O_LAYOUT_NDIMS (H5S_MAX_RANK+1)
H5_DLLVAR const H5O_class_t H5O_LAYOUT[1];
typedef struct H5O_layout_t {
int type; /*type of layout, H5D_layout_t */
haddr_t addr; /*file address of data or B-tree */
unsigned ndims; /*num dimensions in stored data */
hsize_t dim[H5O_LAYOUT_NDIMS]; /*size of data or chunk in bytes */
hbool_t dirty; /*dirty flag for compact dataset */
size_t size; /*size of compact dataset in bytes */
void *buf; /*buffer for compact dataset */
} H5O_layout_t;
/*
* Filter pipeline message.
*/
#define H5O_PLINE_ID 0x000b
H5_DLLVAR const H5O_class_t H5O_PLINE[1];
typedef struct H5O_pline_t {
size_t nfilters; /*num filters defined */
size_t nalloc; /*num elements in `filter' array */
struct {
H5Z_filter_t id; /*filter identification number */
unsigned flags; /*defn and invocation flags */
char *name; /*optional filter name */
size_t cd_nelmts; /*number of elements in cd_values[] */
unsigned *cd_values; /*client data values */
} *filter; /*array of filters */
} H5O_pline_t;
/*
* Attribute Message.
*/
#define H5O_ATTR_ID 0x000c
H5_DLLVAR const H5O_class_t H5O_ATTR[1];
/* operates on an H5A_t struct */
/*
* Object name message.
*/
#define H5O_NAME_ID 0x000d
H5_DLLVAR const H5O_class_t H5O_NAME[1];
typedef struct H5O_name_t {
char *s; /*ptr to malloc'd memory */
} H5O_name_t;
/*
* Modification time message. The message is just a `time_t'.
*/
#define H5O_MTIME_ID 0x000e
H5_DLLVAR const H5O_class_t H5O_MTIME[1];
/*
* Shared object message. This message ID never really appears in an object
* header. Instead, bit 2 of the `Flags' field will be set and the ID field
* will be the ID of the pointed-to message.
*/
#define H5O_SHARED_ID 0x000f
H5_DLLVAR const H5O_class_t H5O_SHARED[1];
typedef struct H5O_shared_t {
hbool_t in_gh; /*shared by global heap? */
union {
H5HG_t gh; /*global heap info */
H5G_entry_t ent; /*symbol table entry info */
} u;
} H5O_shared_t;
/*
* Object header continuation message.
*/
#define H5O_CONT_ID 0x0010
H5_DLLVAR const H5O_class_t H5O_CONT[1];
typedef struct H5O_cont_t {
haddr_t addr; /*address of continuation block */
size_t size; /*size of continuation block */
/* the following field(s) do not appear on disk */
unsigned chunkno; /*chunk this mesg refers to */
} H5O_cont_t;
/*
* Symbol table message.
*/
#define H5O_STAB_ID 0x0011
H5_DLLVAR const H5O_class_t H5O_STAB[1];
H5_DLL void *H5O_stab_fast(const H5G_cache_t *cache, const H5O_class_t *type,
void *_mesg);
typedef struct H5O_stab_t {
haddr_t btree_addr; /*address of B-tree */
haddr_t heap_addr; /*address of name heap */
} H5O_stab_t;
/*
* Generic property list message.
*/
#define H5O_PLIST_ID 0x0012
H5_DLLVAR const H5O_class_t H5O_PLIST[1];
/* operates on an H5P_genplist_t struct */
#ifdef H5_HAVE_FPHDF5
/*
* Flexible parallel message
*/
#define H5O_FPHDF5_ID 0x0013
H5_DLLVAR const H5O_class_t H5O_FPHDF5[1];
struct H5S_simple_t;
struct H5P_genplist_t;
typedef struct H5O_fphdf5_t {
uint8_t oid[H5R_OBJ_REF_BUF_SIZE]; /* OID of object */
struct H5S_simple_t *sdim; /* Simple dimensionality structure */
H5T_t *dtype; /* Datatype structure */
time_t *mtime; /* Modification time */
H5O_name_t *group; /* Group name */
H5O_name_t *dset; /* Dataset name */
struct H5P_genplist_t *plist; /* Property list of the object */
} H5O_fphdf5_t;
/* operates on an H5O_fphdf5_t struct */
#endif /* H5_HAVE_FPHDF5 */
/* General message operators */
H5_DLL herr_t H5O_create(H5F_t *f, size_t size_hint,
H5G_entry_t *ent/*out*/);
H5_DLL herr_t H5O_open(H5G_entry_t *ent);
H5_DLL herr_t H5O_close(H5G_entry_t *ent);
H5_DLL int H5O_link(H5G_entry_t *ent, int adjust);
H5_DLL int H5O_count(H5G_entry_t *ent, const H5O_class_t *type);
H5_DLL htri_t H5O_exists(H5G_entry_t *ent, const H5O_class_t *type,
int sequence);
H5_DLL void *H5O_read(H5G_entry_t *ent, const H5O_class_t *type,
int sequence, void *mesg);
H5_DLL int H5O_modify(H5G_entry_t *ent, const H5O_class_t *type,
int overwrite, unsigned flags, const void *mesg);
H5_DLL herr_t H5O_touch(H5G_entry_t *ent, hbool_t force);
H5_DLL herr_t H5O_remove(H5G_entry_t *ent, const H5O_class_t *type,
int sequence);
H5_DLL herr_t H5O_reset(const H5O_class_t *type, void *native);
H5_DLL void *H5O_free(const H5O_class_t *type, void *mesg);
H5_DLL void *H5O_copy(const H5O_class_t *type, const void *mesg, void *dst);
H5_DLL herr_t H5O_share(H5F_t *f, const H5O_class_t *type, const void *mesg,
H5HG_t *hobj/*out*/);
H5_DLL herr_t H5O_debug(H5F_t *f, haddr_t addr, FILE * stream, int indent,
int fwidth);
/* Layout operators */
H5_DLL size_t H5O_layout_meta_size(H5F_t *f, const void *_mesg);
/* EFL operators */
H5_DLL hsize_t H5O_efl_total_size(H5O_efl_t *efl);
H5_DLL herr_t H5O_efl_read(H5F_t *f, const H5O_efl_t *efl, haddr_t addr,
size_t size, uint8_t *buf);
H5_DLL herr_t H5O_efl_write(H5F_t *f, const H5O_efl_t *efl, haddr_t addr,
size_t size, const uint8_t *buf);
/* Fill value operators */
H5_DLL herr_t H5O_fill_convert(void *_fill, H5T_t *type);
#endif
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