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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* File: H5PBprivate.h
*
* Purpose: This file contains declarations which are normally visible
* within the HDF5 library, but are not visible at the user
* level
*
* Programmer: John Mainzer -- 10/07/18
*/
#ifndef _H5PBprivate_H
#define _H5PBprivate_H
/* Include package's public header */
/* no H5PBpublic.h at present */
/* Private headers needed by this header */
#include "H5private.h" /* Generic Functions */
/**************************/
/* Library Private Macros */
/**************************/
#define H5PB__HASH_TABLE_LEN 4096 /* must be a power of 2 */
/****************************/
/* Library Private Typedefs */
/****************************/
/* Typedef for the page buffer entry structure (defined in H5PBpkg.h) */
typedef struct H5PB_entry_t H5PB_entry_t;
/******************************************************************************
*
* structure H5PB_t
*
* Catchall structure for all variables specific to an instance of the page
* buffer.
*
* At present, the page buffer serves two purposes in the HDF5 library.
*
* Under normal operating conditions, it serves as a normal page buffer whose
* purpose is to minimize and optimize file I/O by aggregating small metadata
* and raw data writes into pages, and by caching frequently used pages.
*
* In addition, when a file is opened for VFD SWMR writing, the page buffer is
* used to retain copies of all metadata pages and multi-page metadata entries
* that are written in a given tick, and under certain cases, to delay metadata
* page and/or multi-page metadata entry writes for some number of ticks.
* If the entry has not appeared in the VFD SWMR index for at least max_lag
* ticks, this is necessary to avoid message from the future bugs. See the
* VFD SWMR RFC for further details.
*
* To reflect this, the fields of this structure are divided into three
* sections. Specifically fields needed for general operations, fields needed
* for VFD SWMR, and statistics.
*
* FIELDS FOR GENERAL OPERATIONS:
*
* magic: Unsigned 32 bit integer that must always be set to
* H5PB__H5PB_T_MAGIC. This field is used to validate pointers to
* instances of H5PB_t.
*
* page_size: size_t containing the page buffer page size in bytes.
*
* max_pages: 64 bit integer containing the nominal maximum number
* of pages in the page buffer. Note that on creation, the page
* buffer is empty, and that under certain circumstances (mostly
* related to VFD SWMR) this limit can be exceeded by large
* amounts.
*
* curr_pages: 64 bit integer containing the current number of pages
* in the page buffer. curr_pages must always equal the sum of
* curr_md_pages + curr_rd_pages.
*
* Note that in the context of VFD SWMR, this count does NOT
* include multi-page metadata entries.
*
* curr_md_pages: 64 bit integer containing the current number of
* metadata pages in the page buffer.
*
* Note that in the context of VFD SWMR, this count does NOT
* include multi-page metadata entries.
*
* curr_rd_pages: 64 bit integer containing the current number of
* raw data pages in the page buffer.
*
* min_md_pages: 64 bit integer containing the number of pages in the
* page buffer reserved for metadata. No metadata page may be
* evicted from the page buffer if curr_md_pages is less than or
* equal to this value.
*
* min_rd_pages: 64 bin integer containing the number of pages in the
* page buffer reserved for raw data. No page or raw data may be
* evicted from the page buffer if curr_rd_pages is less than or
* equal to this value.
*
* The FAPL fields are used to store the page buffer configuration data
* provided to the page buffer in the H5PB_create() call.
*
* max_size: Maximum page buffer size supplied by the FAPL.
*
* min_meta_perc: Percent of the page buffer reserved for metadata as
* supplied in the FAPL.
*
* min_raw_perc: Percent of the page buffer reserved for metadata as
* supplied in the FAPL.
*
* The purpose of the index is to allow us to efficiently look up all pages
* (and multi-page metadata entries in the context of VFD SWMR) in the
* page buffer.
*
* This function is provided by a hash table with chaining, albeit with one
* un-unusual feature.
*
* Specifically hash table size must be a power of two, and the hash function
* simply clips the high order bits off the page offset of the entry.
*
* This should work, as space is typically allocated sequentually, and thus
* via a reverse principle of locality argument, hot pages are unlikely to
* hash to the same bucket. That said, we must collect statistics to alert
* us should this not be the case.
*
* We also maintain a linked list of all entries in the index to facilitate
* flush operations.
*
* index Array of pointer to H5PB_entry_t of size
* H5PB__HASH_TABLE_LEN. This size must ba a power of 2,
* not the usual prime number.
*
* index_len: Number of entries currently in the hash table used to index
* the page buffer. index_len should always equal
* clean_index_len + dirty_index_len.
*
* clean_index_len: Number of clean entries currently in the hash table
* used to index the page buffer.
*
* dirty_index_len: Number of dirty entries currently in the hash table
* used to index the page buffer.
*
* index_size: Number of bytes currently stored in the hash table used to
* index the page buffer. Under normal circumstances, this
* value will be index_len * page size. However, if
* vfd_swmr_writer is TRUE, it may be larger.
*
* index_size should always equal clean_index_size +
* dirty_index_size.
*
* clean_index_size: Number of bytes of clean entries currently stored in
* the hash table used to index the page buffer.
*
* dirty_index_size: Number of bytes of dirty entries currently stored in
* the hash table used to index the page buffer.
*
* il_len: Number of entries on the index list.
*
* This must always be equal to index_len. As such, this
* field is redundant. However, the existing linked list
* management macros expect to maintain a length field, so
* this field exists primarily to avoid adding complexity to
* these macros.
*
* il_size: Number of bytes of cache entries currently stored in the
* index list.
*
* This must always be equal to index_size. As such, this
* field is redundant. However, the existing linked list
* management macros expect to maintain a size field, so
* this field exists primarily to avoid adding complexity to
* these macros.
*
* il_head: Pointer to the head of the doubly linked list of entries in
* the index list. Note that cache entries on this list are
* linked by their il_next and il_prev fields.
*
* This field is NULL if the index is empty.
*
* il_tail: Pointer to the tail of the doubly linked list of entries in
* the index list. Note that cache entries on this list are
* linked by their il_next and il_prev fields.
*
* This field is NULL if the index is empty.
*
*
* Fields supporting the modified LRU policy:
*
* See most any OS text for a discussion of the LRU replacement policy.
*
* Under normal operating circumstances (i.e. vfd_swmr_writer is FALSE)
* all entries will reside both in the index and in the LRU. Further,
* all entries will be of size page_size.
*
* The VFD SWMR writer case (i.e. vfd_swmr_writer is TRUE) is complicated
* by the requirements that we:
*
* 1) buffer all metadat writes (including multi-page metadata writes) that
* occur during a tick, and
*
* 2) when necessary, delay metadata writes for up to max_lag ticks to
* avoid message from the future bugs on the VFD SWMR readers.
*
* See discussion of fields supporting VFD SWMR below for details.
*
* Discussions of the individual fields used by the modified LRU replacement
* policy follow:
*
* LRU_len: Number of page buffer entries currently on the LRU.
*
* Observe that LRU_len + dwl_len must always equal
* index_len.
*
* LRU_size: Number of bytes of page buffer entries currently residing
* on the LRU list.
*
* Observe that LRU_size + dwl_size must always equal
* index_size.
*
* LRU_head_ptr: Pointer to the head of the doubly linked LRU list. Page
* buffer entries on this list are linked by their next and
* prev fields.
*
* This field is NULL if the list is empty.
*
* LRU_tail_ptr: Pointer to the tail of the doubly linked LRU list. Page
* buffer entries on this list are linked by their next and
* prev fields.
*
* This field is NULL if the list is empty.
*
*
* FIELDS SUPPORTING VFD SWMR:
*
* If the file is opened as a VFD SWMR writer (i.e. vfd_swmr_writer == TRUE),
* the page buffer must retain the data necessary to update the metadata
* file at the end of each tick, and also delay writes as necessary so as
* to avoid message from the future bugs on the VFD SWMR readers.
*
* The tick list exists to allow us to buffer copies of all metadata writes
* during a tick, and the delayed write list supports delayed writes.
*
* If a regular page is written to during a tick, it is placed on the tick
* list. If there is no reason to delay its write to file (i.e. either
* it was just allocated, or it has existed in the metadata file index for
* at least max_lag ticks), it is also placed on the LRU, where it may be
* flushed, but not evicted. If its write must be delayed, it is placed on
* the delayed write list, where it must remain until its write delay is
* satisfied -- at which point it is moved to the LRU.
*
* If a multi-page metadata entry is written during a tick, it is placed on
* the tick list. If, in addition, the write of the entry must be delayed,
* it is also place on the delayed write list. Note that multi-page metadata
* entries may never appear on the LRU.
*
* At the end of each tick, the tick list is emptied.
*
* Regular pages are simply removed from the tick list, as they must already
* appear on either the LRU or the delayed write list.
*
* Multi-page metadata entries that are not also on the delayed write list
* are simply flushed and evicted.
*
* The delayed write list is also scanned at the end of each tick. Regular
* entries that are now flushable are placed at the head of the LRU. Multi-
* page metadata entries that are flushable are flushed and evicted.
*
* The remainder of this sections contains discussions of the fields and
* data structures used to support the above operations.
*
* vfd_swmr_writer: Boolean flag that is set to TRUE iff the file is
* the file is opened in VFD SWMR mode. The remaining
* VFD SWMR fields are defined iff vfd_swmr_writer is TRUE.
*
* mpmde_count: int64_t containing the number of multi-page metadata
* entries currently resident in the page buffer. Observe
* that index_len should always equal curr_pages + mpmde_count.
*
* cur_tick: uint64_t containing the current tick. This is a copy of
* the same field in the associated instance of H5F_file_t,
* and is maintained as a convenience.
*
* In the context of VFD SWMR the delayed write list allows us to delay
* metadata writes to the HDF5 file until it appears in all indexes in the
* last max_lag ticks. This is essential if a version of the page or
* multi-page metadata entry already exists in the HDF5 file -- failure to
* delay the write can result in a message from the future which will
* likely be perciived as file corruption by the reader.
*
* To facilitate identification of entries that must be removed from the
* DWL during the end of tick scan, the list always observes the following
* invarient for any entry on the list:
*
* entry_ptr->next == NULL ||
* entry_ptr->delay_write_until >= entry_ptr->next->delay_write_until
*
* Discussion of the fields used to implement the delayed write list follows:
*
* max_delay: Maximum of the delay_write_until fields of the entries on
* the delayed write list. This must never be more than max_lag
* ticks in advance of the current tick, and should be set to
* zero if the delayed write list is empty.
*
* dwl_len: Number of page buffer entries currently on the delayed
* write list.
*
* Observe that LRU_len + dwl_len must always equal
* index_len.
*
* dwl_size: Number of bytes of page buffer entries currently residing
* on the LRU list.
*
* Observe that LRU_size + dwl_size must always equal
* index_size.
*
* dwl_head_ptr: Pointer to the head of the doubly linked delayed write list.
* Page buffer entries on this list are linked by their next and
* prev fields.
*
* This field is NULL if the list is empty.
*
* dwl_tail_ptr: Pointer to the tail of the doubly linked delayed write list.
* Page buffer entries on this list are linked by their next and
* prev fields.
*
* This field is NULL if the list is empty.
*
* For VFD SWMR to function, copies of all pages modified during a tick must
* be retained in the page buffer to allow correct updates to the index and
* metadata file at the end of tick.
*
* To implement this, all entries modified during the current tick are placed
* on the tick list. Entries are removed from the tick list during end of
* tick processing, so each tick starts with an empty tick list.
*
* Unless the entry also resides on the delayed write list, entries on the
* tick list may be flushed, but they may not be evicted.
*
* Discussion of the fields used to implement the tick list follows:
*
* tl_len: Number of page buffer entries currently on the tick list
*
* tl_size: Number of bytes of page buffer entries currently residing
* on the tick list.
*
* tl_head_ptr: Pointer to the head of the doubly linked tick list.
* Page buffer entries on this list are linked by their tl_next
* and tl_prev fields.
*
* This field is NULL if the list is empty.
*
* tl_tail_ptr: Pointer to the tail of the doubly linked tick list.
* Page buffer entries on this list are linked by their tl_next
* and tl_prev fields.
*
* This field is NULL if the list is empty.
*
*
* STATISTICS:
*
* Multi-page metadata entries (which may only appear in VFD
* SWMR mode) are NOT counted in the following statistics.
*
* Note that all statistics fields contain only data since the last time
* that statistics were reset.
*
* bypasses: Array of int64_t of length H5PB__NUM_STAT_TYPES containing
* the number of times that the page buffer has been
* bypassed for raw data, metadata, and for multi-page
* metadata entries (VFD SWMR only) as indexed by 5PB__STATS_MD,
* H5PB__STATS_RD, and H5PB__STATS_MPMDE respectively.
*
* accesses: Array of int64_t of length H5PB__NUM_STAT_TYPES containing
* the number of page buffer accesses for raw data, metadata,
* and for multi-page metadata entries (VFD SWMR only) as
* indexed by 5PB__STATS_MD, H5PB__STATS_RD, and
* H5PB__STATS_MPMDE respectively.
*
* hits: Array of int64_t of length H5PB__NUM_STAT_TYPES containing
* the number of page buffer hits for raw data, metadata,
* and for multi-page metadata entries (VFD SWMR only) as
* indexed by 5PB__STATS_MD, H5PB__STATS_RD, and
* H5PB__STATS_MPMDE respectively.
*
* misses: Array of int64_t of length H5PB__NUM_STAT_TYPES containing
* the number of page buffer misses for raw data, metadata,
* and for multi-page metadata entries (VFD SWMR only) as
* indexed by 5PB__STATS_MD, H5PB__STATS_RD, and
* H5PB__STATS_MPMDE respectively.
*
* loads: Array of int64_t of length H5PB__NUM_STAT_TYPES containing
* the number of page buffer loads for raw data, metadata,
* and for multi-page metadata entries (VFD SWMR only) as
* indexed by 5PB__STATS_MD, H5PB__STATS_RD, and
* H5PB__STATS_MPMDE respectively.
*
* insertions: Array of int64_t of length H5PB__NUM_STAT_TYPES containing
* the number of page buffer insertions of raw data, metadata,
* and for multi-page metadata entries (VFD SWMR only) as
* indexed by 5PB__STATS_MD, H5PB__STATS_RD, and
* H5PB__STATS_MPMDE respectively.
*
* flushes: Array of int64_t of length H5PB__NUM_STAT_TYPES containing
* the number of page buffer flushes of raw data, metadata,
* and for multi-page metadata entries (VFD SWMR only) as
* indexed by 5PB__STATS_MD, H5PB__STATS_RD, and
* H5PB__STATS_MPMDE respectively.
*
* evictions: Array of int64_t of length H5PB__NUM_STAT_TYPES containing
* the number of page buffer evictions of raw data, metadata,
* and for multi-page metadata entries (VFD SWMR only) as
* indexed by 5PB__STATS_MD, H5PB__STATS_RD, and
* H5PB__STATS_MPMDE respectively.
*
* clears: Array of int64_t of length H5PB__NUM_STAT_TYPES containing
* the number of page buffer entry clears of raw data, metadata,
* and for multi-page metadata entries (VFD SWMR only) as
* indexed by 5PB__STATS_MD, H5PB__STATS_RD, and
* H5PB__STATS_MPMDE respectively.
*
* max_lru_len: int64_t containing the maximum number of entries that
* have appeared in the LRU.
*
* max_lru_size: int64_t containing the maximum size of the LRU.
*
* lru_md_skips: When searching for an entry to evict, metadata entries on
* the LRU must be skipped if the number of metadata pages
* in the page buffer fails to exceed min_md_pages.
*
* This int64_t is used to keep a count of these skips.
*
* If this number becomes excessive, it will be necessary to
* add a holding tank for such entries.
*
* lru_rd_skips: When searching for an entry to evict, raw data entries on
* the LRU must be skipped if the number of raw data pages
* in the page buffer fails to exceed min_rd_pages.
*
* This int64_t is used to keep a count of these skips.
*
* If this number becomes excessive, it will be necessary to
* add a holding tank for such entries.
*
* Multi-page metadata entries (which appear only in VFD SWMR mode) are
* listed in the hash take, and thus they are counted in the following
* statistics.
*
* total_ht_insertions: Number of times entries have been inserted into the
* hash table.
*
* total_ht_deletions: Number of times entries have been deleted from the
* hash table.
*
* successful_ht_searches: int64 containing the total number of successful
* searches of the hash table.
*
* total_successful_ht_search_depth: int64 containing the total number of
* entries other than the targets examined in successful
* searches of the hash table.
*
* failed_ht_searches: int64 containing the total number of unsuccessful
* searches of the hash table.
*
* total_failed_ht_search_depth: int64 containing the total number of
* entries examined in unsuccessful searches of the hash
* table.
*
* max_index_len: Largest value attained by the index_len field.
*
* max_clean_index_len: Largest value attained by the clean_index_len field.
*
* max_dirty_index_len: Largest value attained by the dirty_index_len field.
*
* max_index_size: Largest value attained by the index_size field.
*
* max_clean_index_size: Largest value attained by the clean_index_size field.
*
* max_dirty_index_size: Largest value attained by the dirty_index_size field.
*
* max_rd_pages: Maximum number of raw data pages in the page buffer.
*
* max_md_pages: Maximum number of metadata pages in the page buffer.
*
*
* Statistics pretaining to VFD SWMR.
*
* max_mpmde_count: Maximum number of multi-page metadata entries in the
* page buffer.
*
* lru_tl_skips: When searching for an entry to evict, metadata entries on
* the LRU must be skipped if they also reside on the tick list.
*
* This int64_t is used to keep a count of these skips.
*
* If this number becomes excessive, it will be necessary to
* add a holding tank for such entries.
*
* max_tl_len: int64_t containing the maximum value of tl_len.
*
* max_tl_size: int64_t containing the maximum value of tl_size.
*
* delayed_writes: int64_t containing the total number of delayed writes.
*
* total_delay: int64_t containing the total number of ticks by which
* entry writes have been delayed.
*
* max_dwl_len: int64_t containing the maximum value of dwl_len.
*
* max_dwl_size: int64_t containing the maximum value of dwl_size.
*
* total_dwl_ins_depth: int64_t containing the total insertion depth
* required to maintain the odering invarient on the
* delayed write list.
*
******************************************************************************/
#define H5PB__H5PB_T_MAGIC 0x01020304
#define H5PB__STATS_MD 0
#define H5PB__STATS_RD 1
#define H5PB__STATS_MPMDE 2
#define H5PB__NUM_STAT_TYPES 3
typedef struct H5PB_t {
/* Fields for general operations: */
uint32_t magic;
size_t page_size;
int64_t max_pages;
int64_t curr_pages;
int64_t curr_md_pages;
int64_t curr_rd_pages;
int64_t min_md_pages;
int64_t min_rd_pages;
/* FAPL fields */
size_t max_size;
unsigned min_meta_perc;
unsigned min_raw_perc;
/* index */
H5PB_entry_t *(ht[H5PB__HASH_TABLE_LEN]);
int64_t index_len;
int64_t clean_index_len;
int64_t dirty_index_len;
int64_t index_size;
int64_t clean_index_size;
int64_t dirty_index_size;
int64_t il_len;
int64_t il_size;
H5PB_entry_t * il_head;
H5PB_entry_t * il_tail;
/* LRU */
int64_t LRU_len;
int64_t LRU_size;
H5PB_entry_t * LRU_head_ptr;
H5PB_entry_t * LRU_tail_ptr;
/* Fields for VFD SWMR operations: */
hbool_t vfd_swmr_writer;
int64_t mpmde_count;
uint64_t cur_tick;
/* delayed write list */
uint64_t max_delay;
int64_t dwl_len;
int64_t dwl_size;
H5PB_entry_t * dwl_head_ptr;
H5PB_entry_t * dwl_tail_ptr;
/* tick list */
int64_t tl_len;
int64_t tl_size;
H5PB_entry_t * tl_head_ptr;
H5PB_entry_t * tl_tail_ptr;
/* Statistics: */
/* general operations statistics: */
/* these statistics count pages only, not multi-page metadata entries
* (that occur only in the VFD SWMR writer case).
*/
int64_t bypasses[H5PB__NUM_STAT_TYPES];
int64_t accesses[H5PB__NUM_STAT_TYPES];
int64_t hits[H5PB__NUM_STAT_TYPES];
int64_t misses[H5PB__NUM_STAT_TYPES];
int64_t loads[H5PB__NUM_STAT_TYPES];
int64_t insertions[H5PB__NUM_STAT_TYPES];
int64_t flushes[H5PB__NUM_STAT_TYPES];
int64_t evictions[H5PB__NUM_STAT_TYPES];
int64_t clears[H5PB__NUM_STAT_TYPES];
int64_t max_lru_len;
int64_t max_lru_size;
int64_t lru_md_skips;
int64_t lru_rd_skips;
/* In the VFD SWMR case, both pages and multi-page metadata entries
* are stored in the index. Thus mult-page metadata entries are
* included in the index related statistics.
*/
int64_t total_ht_insertions;
int64_t total_ht_deletions;
int64_t successful_ht_searches;
int64_t total_successful_ht_search_depth;
int64_t failed_ht_searches;
int64_t total_failed_ht_search_depth;
int64_t max_index_len;
int64_t max_clean_index_len;
int64_t max_dirty_index_len;
int64_t max_index_size;
int64_t max_clean_index_size;
int64_t max_dirty_index_size;
int64_t max_rd_pages;
int64_t max_md_pages;
/* vfd swmr statistics */
int64_t max_mpmde_count;
int64_t lru_tl_skips;
int64_t max_tl_len;
int64_t max_tl_size;
int64_t delayed_writes;
int64_t total_delay;
int64_t max_dwl_len;
int64_t max_dwl_size;
int64_t total_dwl_ins_depth;
} H5PB_t;
/*****************************/
/* Library-private Variables */
/*****************************/
/***************************************/
/* Library-private Function Prototypes */
/***************************************/
/* General routines */
H5_DLL herr_t H5PB_create(H5F_t *file, size_t page_buffer_size,
unsigned page_buf_min_meta_perc, unsigned page_buf_min_raw_perc);
H5_DLL herr_t H5PB_flush(H5F_t *f);
H5_DLL herr_t H5PB_dest(H5F_t *f);
H5_DLL herr_t H5PB_add_new_page(H5F_t *f, H5FD_mem_t type, haddr_t page_addr);
H5_DLL herr_t H5PB_update_entry(H5PB_t *page_buf, haddr_t addr, size_t size,
const void *buf);
H5_DLL herr_t H5PB_remove_entry(const H5F_t *f, haddr_t addr);
H5_DLL herr_t H5PB_read(H5F_t *f, H5FD_mem_t type, haddr_t addr, size_t size,
void *buf/*out*/);
H5_DLL herr_t H5PB_write(H5F_t *f, H5FD_mem_t type, haddr_t addr, size_t size,
const void *buf);
/* VFD SWMR specific routines */
H5_DLL herr_t H5PB_vfd_swmr__release_delayed_writes(H5F_t * f);
H5_DLL herr_t H5PB_vfd_swmr__release_tick_list(H5F_t * f);
H5_DLL herr_t H5PB_vfd_swmr__set_tick(H5F_t * f);
H5_DLL herr_t H5PB_vfd_swmr__update_index(H5F_t * f,
uint32_t * idx_ent_added_ptr, uint32_t * idx_ent_modified_ptr,
uint32_t * idx_ent_not_in_tl_ptr, uint32_t * idx_ent_not_in_tl_flushed_ptr);
/* Statistics routines */
H5_DLL herr_t H5PB_reset_stats(H5PB_t *page_buf);
H5_DLL herr_t H5PB_get_stats(const H5PB_t *page_buf, unsigned accesses[2],
unsigned hits[2], unsigned misses[2], unsigned evictions[2],
unsigned bypasses[2]);
H5_DLL herr_t H5PB_print_stats(const H5PB_t *page_buf);
/* test & debug functions */
H5_DLL herr_t H5PB_page_exists(H5F_t *f, haddr_t addr,
hbool_t *page_exists_ptr);
#endif /* !_H5PBprivate_H */
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