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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
 * Copyright by The HDF Group.                                               *
 * Copyright by the Board of Trustees of the University of Illinois.         *
 * All rights reserved.                                                      *
 *                                                                           *
 * This file is part of HDF5.  The full HDF5 copyright notice, including     *
 * terms governing use, modification, and redistribution, is contained in    *
 * the files COPYING and Copyright.html.  COPYING can be found at the root   *
 * of the source code distribution tree; Copyright.html can be found at the  *
 * root level of an installed copy of the electronic HDF5 document set and   *
 * is linked from the top-level documents page.  It can also be found at     *
 * http://hdfgroup.org/HDF5/doc/Copyright.html.  If you do not have          *
 * access to either file, you may request a copy from help@hdfgroup.org.     *
 * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */

/*-------------------------------------------------------------------------
 *
 * Created:		H5HF.c
 *			Feb 24 2006
 *			Quincey Koziol <koziol@ncsa.uiuc.edu>
 *
 * Purpose:		Implements a "fractal heap" for storing variable-
 *                      length objects in a file.
 *
 *                      Please see the documentation in:
 *                      doc/html/TechNotes/FractalHeap.html for a full description
 *                      of how they work, etc.
 *
 *-------------------------------------------------------------------------
 */

/****************/
/* Module Setup */
/****************/

#define H5HF_PACKAGE		/*suppress error about including H5HFpkg  */

/***********/
/* Headers */
/***********/
#include "H5private.h"		/* Generic Functions			*/
#include "H5Eprivate.h"		/* Error handling		  	*/
#include "H5FOprivate.h"        /* File objects                         */
#include "H5HFpkg.h"		/* Fractal heaps			*/
#include "H5MFprivate.h"	/* File memory management		*/

/****************/
/* Local Macros */
/****************/


/******************/
/* Local Typedefs */
/******************/


/********************/
/* Package Typedefs */
/********************/


/********************/
/* Local Prototypes */
/********************/


/*********************/
/* Package Variables */
/*********************/


/*****************************/
/* Library Private Variables */
/*****************************/


/*******************/
/* Local Variables */
/*******************/

/* Declare a free list to manage the H5HF_t struct */
H5FL_DEFINE_STATIC(H5HF_t);



/*-------------------------------------------------------------------------
 * Function:	H5HF_op_read
 *
 * Purpose:	Performs a 'read' operation for a heap 'op' callback
 *
 * Return:	SUCCEED/FAIL
 *
 * Programmer:	Quincey Koziol
 *		koziol@hdfgroup.org
 *		Sep 11 2006
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5HF_op_read(const void *obj, size_t obj_len, void *op_data)
{
    FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5HF_op_read)

    /* Perform "read", using memcpy() */
    HDmemcpy(op_data, obj, obj_len);

    FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5HF_op_read() */


/*-------------------------------------------------------------------------
 * Function:	H5HF_op_write
 *
 * Purpose:	Performs a 'write' operation for a heap 'op' callback
 *
 * Return:	SUCCEED/FAIL
 *
 * Programmer:	Quincey Koziol
 *		koziol@hdfgroup.org
 *		Dec 18 2006
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5HF_op_write(const void *obj, size_t obj_len, void *op_data)
{
    FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5HF_op_write)

    /* Perform "write", using memcpy() */
    HDmemcpy((void *)obj, op_data, obj_len);    /* Casting away const OK -QAK */

    FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5HF_op_write() */


/*-------------------------------------------------------------------------
 * Function:	H5HF_create
 *
 * Purpose:	Creates a new empty fractal heap in the file.
 *
 * Return:	Pointer to heap wrapper on success
 *              NULL on failure
 *
 * Programmer:	Quincey Koziol
 *		koziol@ncsa.uiuc.edu
 *		Feb 24 2006
 *
 *-------------------------------------------------------------------------
 */
H5HF_t *
H5HF_create(H5F_t *f, hid_t dxpl_id, const H5HF_create_t *cparam)
{
    H5HF_t *fh = NULL;          /* Pointer to new fractal heap */
    H5HF_hdr_t *hdr = NULL;     /* The fractal heap header information */
    haddr_t fh_addr;            /* Heap header address */
    H5HF_t *ret_value;          /* Return value */

    FUNC_ENTER_NOAPI(H5HF_create, NULL)
#ifdef QAK
HDfprintf(stderr, "%s: Called\n", FUNC);
#endif /* QAK */

    /*
     * Check arguments.
     */
    HDassert(f);
    HDassert(cparam);

    /* Create shared fractal heap header */
    if(HADDR_UNDEF == (fh_addr = H5HF_hdr_create(f, dxpl_id, cparam)))
	HGOTO_ERROR(H5E_HEAP, H5E_CANTINIT, NULL, "can't create fractal heap header")

    /* Allocate fractal heap wrapper */
    if(NULL == (fh = H5FL_MALLOC(H5HF_t)))
        HGOTO_ERROR(H5E_HEAP, H5E_CANTALLOC, NULL, "memory allocation failed for fractal heap info")

    /* Lock the heap header into memory */
    if(NULL == (hdr = (H5HF_hdr_t *)H5AC_protect(f, dxpl_id, H5AC_FHEAP_HDR, fh_addr, NULL, NULL, H5AC_WRITE)))
        HGOTO_ERROR(H5E_HEAP, H5E_CANTPROTECT, NULL, "unable to load fractal heap header")

    /* Point fractal heap wrapper at header and bump it's ref count */
    fh->hdr = hdr;
    if(H5HF_hdr_incr(fh->hdr) < 0)
	HGOTO_ERROR(H5E_HEAP, H5E_CANTINC, NULL, "can't increment reference count on shared heap header")

    /* Increment # of files using this heap header */
    if(H5HF_hdr_fuse_incr(fh->hdr) < 0)
	HGOTO_ERROR(H5E_HEAP, H5E_CANTINC, NULL, "can't increment file reference count on shared heap header")

    /* Set file pointer for this heap open context */
    fh->f = f;

    /* Set the return value */
    ret_value = fh;

done:
    if(hdr && H5AC_unprotect(f, dxpl_id, H5AC_FHEAP_HDR, fh_addr, hdr, H5AC__NO_FLAGS_SET) < 0)
        HDONE_ERROR(H5E_HEAP, H5E_CANTUNPROTECT, NULL, "unable to release fractal heap header")
    if(!ret_value && fh)
        if(H5HF_close(fh, dxpl_id) < 0)
            HDONE_ERROR(H5E_HEAP, H5E_CANTCLOSEOBJ, NULL, "unable to close fractal heap")

    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5HF_create() */


/*-------------------------------------------------------------------------
 * Function:	H5HF_open
 *
 * Purpose:	Opens an existing fractal heap in the file.
 *
 * Return:	Pointer to heap wrapper on success
 *              NULL on failure
 *
 * Programmer:	Quincey Koziol
 *		koziol@ncsa.uiuc.edu
 *		Apr 18 2006
 *
 *-------------------------------------------------------------------------
 */
H5HF_t *
H5HF_open(H5F_t *f, hid_t dxpl_id, haddr_t fh_addr)
{
    H5HF_t *fh = NULL;          /* Pointer to new fractal heap */
    H5HF_hdr_t *hdr = NULL;     /* The fractal heap header information */
    H5HF_t *ret_value;          /* Return value */

    FUNC_ENTER_NOAPI(H5HF_open, NULL)

    /*
     * Check arguments.
     */
    HDassert(f);
    HDassert(H5F_addr_defined(fh_addr));

    /* Load the heap header into memory */
#ifdef QAK
HDfprintf(stderr, "%s: fh_addr = %a\n", FUNC, fh_addr);
#endif /* QAK */
    if(NULL == (hdr = (H5HF_hdr_t *)H5AC_protect(f, dxpl_id, H5AC_FHEAP_HDR, fh_addr, NULL, NULL, H5AC_READ)))
        HGOTO_ERROR(H5E_HEAP, H5E_CANTLOAD, NULL, "unable to load fractal heap header")
#ifdef QAK
HDfprintf(stderr, "%s: hdr->rc = %u, hdr->fspace = %p\n", FUNC, hdr->rc, hdr->fspace);
#endif /* QAK */

    /* Check for pending heap deletion */
    if(hdr->pending_delete)
        HGOTO_ERROR(H5E_HEAP, H5E_CANTOPENOBJ, NULL, "can't open fractal heap pending deletion")

    /* Create fractal heap info */
    if(NULL == (fh = H5FL_MALLOC(H5HF_t)))
        HGOTO_ERROR(H5E_HEAP, H5E_CANTALLOC, NULL, "memory allocation failed for fractal heap info")

    /* Point fractal heap wrapper at header */
    fh->hdr = hdr;
    if(H5HF_hdr_incr(fh->hdr) < 0)
        HGOTO_ERROR(H5E_HEAP, H5E_CANTINC, NULL, "can't increment reference count on shared heap header")

    /* Increment # of files using this heap header */
    if(H5HF_hdr_fuse_incr(fh->hdr) < 0)
	HGOTO_ERROR(H5E_HEAP, H5E_CANTINC, NULL, "can't increment file reference count on shared heap header")

    /* Set file pointer for this heap open context */
    fh->f = f;

    /* Set the return value */
    ret_value = fh;

done:
    if(hdr && H5AC_unprotect(f, dxpl_id, H5AC_FHEAP_HDR, fh_addr, hdr, H5AC__NO_FLAGS_SET) < 0)
        HDONE_ERROR(H5E_HEAP, H5E_CANTUNPROTECT, NULL, "unable to release fractal heap header")
    if(!ret_value && fh)
        if(H5HF_close(fh, dxpl_id) < 0)
            HDONE_ERROR(H5E_HEAP, H5E_CANTCLOSEOBJ, NULL, "unable to close fractal heap")

    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5HF_open() */


/*-------------------------------------------------------------------------
 * Function:	H5HF_get_id_len
 *
 * Purpose:	Get the size of IDs for entries in a fractal heap
 *
 * Return:	SUCCEED/FAIL
 *
 * Programmer:	Quincey Koziol
 *		koziol@ncsa.uiuc.edu
 *		Apr 17 2006
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5HF_get_id_len(H5HF_t *fh, size_t *id_len_p)
{
    FUNC_ENTER_NOAPI_NOFUNC(H5HF_get_id_len)

    /*
     * Check arguments.
     */
    HDassert(fh);
    HDassert(id_len_p);

    /* Retrieve the ID length for entries in this heap */
    *id_len_p = fh->hdr->id_len;

    FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5HF_get_id_len() */


/*-------------------------------------------------------------------------
 * Function:	H5HF_get_heap_addr
 *
 * Purpose:	Get the address of a fractal heap
 *
 * Return:	SUCCEED/FAIL
 *
 * Programmer:	Quincey Koziol
 *		koziol@ncsa.uiuc.edu
 *		Apr 18 2006
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5HF_get_heap_addr(const H5HF_t *fh, haddr_t *heap_addr_p)
{
    FUNC_ENTER_NOAPI_NOFUNC(H5HF_get_heap_addr)

    /*
     * Check arguments.
     */
    HDassert(fh);
    HDassert(heap_addr_p);

    /* Retrieve the heap header address for this heap */
    *heap_addr_p = fh->hdr->heap_addr;

    FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5HF_get_heap_addr() */


/*-------------------------------------------------------------------------
 * Function:	H5HF_insert
 *
 * Purpose:	Insert a new object into a fractal heap.
 *
 * Return:	Non-negative on success (with heap ID of new object
 *              filled in), negative on failure
 *
 * Programmer:	Quincey Koziol
 *		koziol@ncsa.uiuc.edu
 *		Feb 24 2006
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5HF_insert(H5HF_t *fh, hid_t dxpl_id, size_t size, const void *obj,
    void *id/*out*/)
{
    H5HF_hdr_t *hdr = NULL;                  /* The fractal heap header information */
    herr_t ret_value = SUCCEED;

    FUNC_ENTER_NOAPI(H5HF_insert, FAIL)
#ifdef QAK
HDfprintf(stderr, "%s: size = %Zu\n", FUNC, size);
#endif /* QAK */

    /* Sanity check */
    HDassert(fh);
    HDassert(obj);
    HDassert(id);

    /* Check arguments */
    if(size == 0)
        HGOTO_ERROR(H5E_HEAP, H5E_BADRANGE, FAIL, "can't insert 0-sized objects")

    /* Set the shared heap header's file context for this operation */
    fh->hdr->f = fh->f;

    /* Get the fractal heap header */
    hdr = fh->hdr;

    /* Check for 'huge' object */
    if(size > hdr->max_man_size) {
        /* Store 'huge' object in heap */
        /* (Casting away const OK - QAK) */
        if(H5HF_huge_insert(hdr, dxpl_id, size, (void *)obj, id) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTINSERT, FAIL, "can't store 'huge' object in fractal heap")
    } /* end if */
    /* Check for 'tiny' object */
    else if(size <= hdr->tiny_max_len) {
        /* Store 'tiny' object in heap */
        if(H5HF_tiny_insert(hdr, size, obj, id) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTINSERT, FAIL, "can't store 'tiny' object in fractal heap")
    } /* end if */
    else {
        /* Check if we are in "append only" mode, or if there's enough room for the object */
        if(hdr->write_once) {
HGOTO_ERROR(H5E_HEAP, H5E_UNSUPPORTED, FAIL, "'write once' managed blocks not supported yet")
        } /* end if */
        else {
            /* Allocate space for object in 'managed' heap */
            if(H5HF_man_insert(hdr, dxpl_id, size, obj, id) < 0)
                HGOTO_ERROR(H5E_HEAP, H5E_CANTINSERT, FAIL, "can't store 'managed' object in fractal heap")
        } /* end else */
    } /* end else */

done:
#ifdef QAK
HDfprintf(stderr, "%s: Leaving, ret_value = %d\n", FUNC, ret_value);
#endif /* QAK */
    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5HF_insert() */


/*-------------------------------------------------------------------------
 * Function:	H5HF_get_obj_len
 *
 * Purpose:	Get the size of an entry in a fractal heap
 *
 * Return:	SUCCEED/FAIL
 *
 * Programmer:	Quincey Koziol
 *		koziol@ncsa.uiuc.edu
 *		May  9 2006
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5HF_get_obj_len(H5HF_t *fh, hid_t dxpl_id, const void *_id, size_t *obj_len_p)
{
    const uint8_t *id = (const uint8_t *)_id;   /* Object ID */
    uint8_t id_flags;                   /* Heap ID flag bits */
    herr_t ret_value = SUCCEED;         /* Return value */

    FUNC_ENTER_NOAPI(H5HF_get_obj_len, FAIL)

    /*
     * Check arguments.
     */
    HDassert(fh);
    HDassert(id);
    HDassert(obj_len_p);

    /* Get the ID flags */
    id_flags = *id;

    /* Check for correct heap ID version */
    if((id_flags & H5HF_ID_VERS_MASK) != H5HF_ID_VERS_CURR)
        HGOTO_ERROR(H5E_HEAP, H5E_VERSION, FAIL, "incorrect heap ID version")

    /* Set the shared heap header's file context for this operation */
    fh->hdr->f = fh->f;

    /* Check type of object in heap */
    if((id_flags & H5HF_ID_TYPE_MASK) == H5HF_ID_TYPE_MAN) {
        /* Skip over the flag byte */
        id++;

        /* Skip over object offset */
        id += fh->hdr->heap_off_size;

        /* Retrieve the entry length */
        UINT64DECODE_VAR(id, *obj_len_p, fh->hdr->heap_len_size);
    } /* end if */
    else if((id_flags & H5HF_ID_TYPE_MASK) == H5HF_ID_TYPE_HUGE) {
        if(H5HF_huge_get_obj_len(fh->hdr, dxpl_id, id, obj_len_p) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTGET, FAIL, "can't get 'huge' object's length")
    } /* end if */
    else if((id_flags & H5HF_ID_TYPE_MASK) == H5HF_ID_TYPE_TINY) {
        if(H5HF_tiny_get_obj_len(fh->hdr, id, obj_len_p) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTGET, FAIL, "can't get 'tiny' object's length")
    } /* end if */
    else {
HDfprintf(stderr, "%s: Heap ID type not supported yet!\n", FUNC);
HGOTO_ERROR(H5E_HEAP, H5E_UNSUPPORTED, FAIL, "heap ID type not supported yet")
    } /* end else */

done:
    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5HF_get_obj_len() */


/*-------------------------------------------------------------------------
 * Function:	H5HF_read
 *
 * Purpose:	Read an object from a fractal heap into a buffer
 *
 * Return:	SUCCEED/FAIL
 *
 * Programmer:	Quincey Koziol
 *		koziol@ncsa.uiuc.edu
 *		Mar 18 2006
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5HF_read(H5HF_t *fh, hid_t dxpl_id, const void *_id, void *obj/*out*/)
{
    const uint8_t *id = (const uint8_t *)_id;   /* Object ID */
    uint8_t id_flags;                   /* Heap ID flag bits */
    herr_t ret_value = SUCCEED;         /* Return value */

    FUNC_ENTER_NOAPI(H5HF_read, FAIL)

    /*
     * Check arguments.
     */
    HDassert(fh);
    HDassert(id);
    HDassert(obj);

    /* Get the ID flags */
    id_flags = *id;

    /* Check for correct heap ID version */
    if((id_flags & H5HF_ID_VERS_MASK) != H5HF_ID_VERS_CURR)
        HGOTO_ERROR(H5E_HEAP, H5E_VERSION, FAIL, "incorrect heap ID version")

    /* Set the shared heap header's file context for this operation */
    fh->hdr->f = fh->f;

    /* Check type of object in heap */
    if((id_flags & H5HF_ID_TYPE_MASK) == H5HF_ID_TYPE_MAN) {
        /* Read object from managed heap blocks */
        if(H5HF_man_read(fh->hdr, dxpl_id, id, obj) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTGET, FAIL, "can't read object from fractal heap")
    } /* end if */
    else if((id_flags & H5HF_ID_TYPE_MASK) == H5HF_ID_TYPE_HUGE) {
        /* Read 'huge' object from file */
        if(H5HF_huge_read(fh->hdr, dxpl_id, id, obj) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTGET, FAIL, "can't read 'huge' object from fractal heap")
    } /* end if */
    else if((id_flags & H5HF_ID_TYPE_MASK) == H5HF_ID_TYPE_TINY) {
        /* Read 'tiny' object from file */
        if(H5HF_tiny_read(fh->hdr, id, obj) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTGET, FAIL, "can't read 'tiny' object from fractal heap")
    } /* end if */
    else {
HDfprintf(stderr, "%s: Heap ID type not supported yet!\n", FUNC);
HGOTO_ERROR(H5E_HEAP, H5E_UNSUPPORTED, FAIL, "heap ID type not supported yet")
    } /* end else */

done:
    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5HF_read() */


/*-------------------------------------------------------------------------
 * Function:	H5HF_write
 *
 * Purpose:	Write an object from a buffer into a fractal heap
 *
 * Notes:	Writing objects in "managed" heap blocks is only storage
 *		method currently supported.  (Which could be expanded to
 *		'huge' and 'tiny' objects, with some work)
 *
 *		Also, assumes that the 'op' routine modifies the data, and
 *		marks data to be written back to disk, even if 'op' routine
 *		didn't actually change anything.  (Which could be modified
 *		to pass "did_modify" flag to callback, if necessary)
 *
 *		Also, assumes that object to write is same size as object in
 *		heap.
 *
 * Return:	SUCCEED/FAIL
 *
 * Programmer:	Quincey Koziol
 *		koziol@hdfgroup.org
 *		Dec 18 2006
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5HF_write(H5HF_t *fh, hid_t dxpl_id, void *_id, hbool_t UNUSED *id_changed,
    const void *obj)
{
    uint8_t *id = (uint8_t *)_id;       /* Object ID */
    uint8_t id_flags;                   /* Heap ID flag bits */
    herr_t ret_value = SUCCEED;         /* Return value */

    FUNC_ENTER_NOAPI(H5HF_write, FAIL)
#ifdef QAK
HDfprintf(stderr, "%s: Called\n", FUNC);
#endif /* QAK */

    /*
     * Check arguments.
     */
    HDassert(fh);
    HDassert(id);
    HDassert(obj);

    /* Get the ID flags */
    id_flags = *id;

    /* Check for correct heap ID version */
    if((id_flags & H5HF_ID_VERS_MASK) != H5HF_ID_VERS_CURR)
        HGOTO_ERROR(H5E_HEAP, H5E_VERSION, FAIL, "incorrect heap ID version")

    /* Set the shared heap header's file context for this operation */
    fh->hdr->f = fh->f;

    /* Check type of object in heap */
    if((id_flags & H5HF_ID_TYPE_MASK) == H5HF_ID_TYPE_MAN) {
        /* Operate on object from managed heap blocks */
        /* (ID can't change and modifying object is "easy" to manage) */
        if(H5HF_man_write(fh->hdr, dxpl_id, id, obj) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_WRITEERROR, FAIL, "can't write to 'managed' heap object")
    } /* end if */
    else if((id_flags & H5HF_ID_TYPE_MASK) == H5HF_ID_TYPE_HUGE) {
        /* Operate on "huge" object */
        if(H5HF_huge_write(fh->hdr, dxpl_id, id, obj) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_WRITEERROR, FAIL, "can't write to 'huge' heap object")
    } /* end if */
    else if((id_flags & H5HF_ID_TYPE_MASK) == H5HF_ID_TYPE_TINY) {
        /* Check for writing a 'tiny' object */
        /* (which isn't supported yet - ID will change) */
        HGOTO_ERROR(H5E_HEAP, H5E_UNSUPPORTED, FAIL, "modifying 'tiny' object not supported yet")
    } /* end if */
    else {
HDfprintf(stderr, "%s: Heap ID type not supported yet!\n", FUNC);
HGOTO_ERROR(H5E_HEAP, H5E_UNSUPPORTED, FAIL, "heap ID type not supported yet")
    } /* end else */

done:
    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5HF_write() */


/*-------------------------------------------------------------------------
 * Function:	H5HF_op
 *
 * Purpose:	Perform an operation directly on a heap object
 *
 * Note:	The library routines currently assume that the 'op' callback
 *		won't modify the object.  This can easily be changed later for
 *		"managed" heap objects, and, with some difficulty, for 'huge'
 *		and 'tiny' heap objects.
 *
 * Return:	SUCCEED/FAIL
 *
 * Programmer:	Quincey Koziol
 *		koziol@hdfgroup.org
 *		Sept 11 2006
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5HF_op(H5HF_t *fh, hid_t dxpl_id, const void *_id, H5HF_operator_t op,
    void *op_data)
{
    const uint8_t *id = (const uint8_t *)_id;   /* Object ID */
    uint8_t id_flags;                   /* Heap ID flag bits */
    herr_t ret_value = SUCCEED;         /* Return value */

    FUNC_ENTER_NOAPI(H5HF_op, FAIL)

    /*
     * Check arguments.
     */
    HDassert(fh);
    HDassert(id);
    HDassert(op);

    /* Get the ID flags */
    id_flags = *id;

    /* Check for correct heap ID version */
    if((id_flags & H5HF_ID_VERS_MASK) != H5HF_ID_VERS_CURR)
        HGOTO_ERROR(H5E_HEAP, H5E_VERSION, FAIL, "incorrect heap ID version")

    /* Set the shared heap header's file context for this operation */
    fh->hdr->f = fh->f;

    /* Check type of object in heap */
    if((id_flags & H5HF_ID_TYPE_MASK) == H5HF_ID_TYPE_MAN) {
        /* Operate on object from managed heap blocks */
        if(H5HF_man_op(fh->hdr, dxpl_id, id, op, op_data) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTOPERATE, FAIL, "can't operate on object from fractal heap")
    } /* end if */
    else if((id_flags & H5HF_ID_TYPE_MASK) == H5HF_ID_TYPE_HUGE) {
        /* Operate on 'huge' object from file */
        if(H5HF_huge_op(fh->hdr, dxpl_id, id, op, op_data) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTOPERATE, FAIL, "can't operate on 'huge' object from fractal heap")
    } /* end if */
    else if((id_flags & H5HF_ID_TYPE_MASK) == H5HF_ID_TYPE_TINY) {
        /* Operate on 'tiny' object from file */
        if(H5HF_tiny_op(fh->hdr, id, op, op_data) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTOPERATE, FAIL, "can't operate on 'tiny' object from fractal heap")
    } /* end if */
    else {
HDfprintf(stderr, "%s: Heap ID type not supported yet!\n", FUNC);
HGOTO_ERROR(H5E_HEAP, H5E_UNSUPPORTED, FAIL, "heap ID type not supported yet")
    } /* end else */

done:
    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5HF_op() */


/*-------------------------------------------------------------------------
 * Function:	H5HF_remove
 *
 * Purpose:	Remove an object from a fractal heap
 *
 * Return:	SUCCEED/FAIL
 *
 * Programmer:	Quincey Koziol
 *		koziol@ncsa.uiuc.edu
 *		May 15 2006
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5HF_remove(H5HF_t *fh, hid_t dxpl_id, const void *_id)
{
    const uint8_t *id = (const uint8_t *)_id;   /* Object ID */
    uint8_t id_flags;                   /* Heap ID flag bits */
    herr_t ret_value = SUCCEED;         /* Return value */

    FUNC_ENTER_NOAPI(H5HF_remove, FAIL)
#ifdef QAK
HDfprintf(stderr, "%s: Called\n", FUNC);
#endif /* QAK */

    /*
     * Check arguments.
     */
    HDassert(fh);
    HDassert(fh->hdr);
    HDassert(id);

    /* Get the ID flags */
    id_flags = *id;

    /* Check for correct heap ID version */
    if((id_flags & H5HF_ID_VERS_MASK) != H5HF_ID_VERS_CURR)
        HGOTO_ERROR(H5E_HEAP, H5E_VERSION, FAIL, "incorrect heap ID version")

    /* Set the shared heap header's file context for this operation */
    fh->hdr->f = fh->f;

    /* Check type of object in heap */
    if((id_flags & H5HF_ID_TYPE_MASK) == H5HF_ID_TYPE_MAN) {
        /* Remove object from managed heap blocks */
        if(H5HF_man_remove(fh->hdr, dxpl_id, id) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTREMOVE, FAIL, "can't remove object from fractal heap")
    } /* end if */
    else if((id_flags & H5HF_ID_TYPE_MASK) == H5HF_ID_TYPE_HUGE) {
        /* Remove 'huge' object from file & v2 B-tree tracker */
        if(H5HF_huge_remove(fh->hdr, dxpl_id, id) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTREMOVE, FAIL, "can't remove 'huge' object from fractal heap")
    } /* end if */
    else if((id_flags & H5HF_ID_TYPE_MASK) == H5HF_ID_TYPE_TINY) {
        /* Remove 'tiny' object from heap statistics */
        if(H5HF_tiny_remove(fh->hdr, id) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTREMOVE, FAIL, "can't remove 'tiny' object from fractal heap")
    } /* end if */
    else {
HDfprintf(stderr, "%s: Heap ID type not supported yet!\n", FUNC);
HGOTO_ERROR(H5E_HEAP, H5E_UNSUPPORTED, FAIL, "heap ID type not supported yet")
    } /* end else */

done:
    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5HF_remove() */


/*-------------------------------------------------------------------------
 * Function:	H5HF_close
 *
 * Purpose:	Close a fractal heap
 *
 * Return:	SUCCEED/FAIL
 *
 * Programmer:	Quincey Koziol
 *		koziol@ncsa.uiuc.edu
 *		Apr 17 2006
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5HF_close(H5HF_t *fh, hid_t dxpl_id)
{
    hbool_t pending_delete = FALSE;     /* Whether the heap is pending deletion */
    haddr_t heap_addr = HADDR_UNDEF;    /* Address of heap (for deletion) */
    herr_t ret_value = SUCCEED;         /* Return value */

    FUNC_ENTER_NOAPI(H5HF_close, FAIL)

    /*
     * Check arguments.
     */
    HDassert(fh);

    /* Decrement file reference & check if this is the last open fractal heap using the shared heap header */
    if(0 == H5HF_hdr_fuse_decr(fh->hdr)) {
        /* Set the shared heap header's file context for this operation */
        fh->hdr->f = fh->f;

        /* Close the free space information */
        /* (Can't put this in header "destroy" routine, because it has
         *      pointers to indirect blocks in the heap, which would create
         *      a reference loop and the objects couldn't be removed from
         *      the metadata cache - QAK)
         */
        if(H5HF_space_close(fh->hdr, dxpl_id) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTRELEASE, FAIL, "can't release free space info")

        /* Reset the block iterator, if necessary */
        /* (Can't put this in header "destroy" routine, because it has
         *      pointers to indirect blocks in the heap, which would create
         *      a reference loop and the objects couldn't be removed from
         *      the metadata cache - QAK)
         */
#ifdef QAK
HDfprintf(stderr, "%s; fh->hdr->man_iter_off = %Hu\n", FUNC, fh->hdr->man_iter_off);
HDfprintf(stderr, "%s; fh->hdr->man_size = %Hu\n", FUNC, fh->hdr->man_size);
HDfprintf(stderr, "%s; fh->hdr->rc = %Zu\n", FUNC, fh->hdr->rc);
#endif /* QAK */
        if(H5HF_man_iter_ready(&fh->hdr->next_block))
            if(H5HF_man_iter_reset(&fh->hdr->next_block) < 0)
                HGOTO_ERROR(H5E_HEAP, H5E_CANTRELEASE, FAIL, "can't reset block iterator")
#ifdef QAK
HDfprintf(stderr, "%s; After iterator reset fh->hdr->rc = %Zu\n", FUNC, fh->hdr->rc);
#endif /* QAK */

        /* Shut down the huge object information */
        /* (Can't put this in header "destroy" routine, because it has
         *      has the address of an object in the file, which might be
         *      modified by the shutdown routine - QAK)
         */
        if(H5HF_huge_term(fh->hdr, dxpl_id) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTRELEASE, FAIL, "can't release 'huge' object info")

        /* Check for pending heap deletion */
        if(fh->hdr->pending_delete) {
            /* Set local info, so heap deletion can occur after decrementing the
             *  header's ref count
             */
            pending_delete = TRUE;
            heap_addr = fh->hdr->heap_addr;
        } /* end if */
    } /* end if */

    /* Decrement the reference count on the heap header */
    /* (don't put in H5HF_hdr_fuse_decr() as the heap header may be evicted
     *  immediately -QAK)
     */
    if(H5HF_hdr_decr(fh->hdr) < 0)
        HGOTO_ERROR(H5E_HEAP, H5E_CANTDEC, FAIL, "can't decrement reference count on shared heap header")

    /* Check for pending heap deletion */
    if(pending_delete) {
        H5HF_hdr_t *hdr;            /* Another pointer to fractal heap header */

        /* Lock the heap header into memory */
        if(NULL == (hdr = (H5HF_hdr_t *)H5AC_protect(fh->f, dxpl_id, H5AC_FHEAP_HDR, heap_addr, NULL, NULL, H5AC_WRITE)))
            HGOTO_ERROR(H5E_HEAP, H5E_CANTLOAD, FAIL, "unable to load fractal heap header")

        /* Set the shared heap header's file context for this operation */
        hdr->f = fh->f;

        /* Delete heap, starting with header (unprotects header) */
        if(H5HF_hdr_delete(hdr, dxpl_id) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTDELETE, FAIL, "unable to delete fractal heap")
    } /* end if */

    /* Release the fractal heap wrapper */
    (void)H5FL_FREE(H5HF_t, fh);

done:
    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5HF_close() */


/*-------------------------------------------------------------------------
 * Function:	H5HF_delete
 *
 * Purpose:	Delete a fractal heap
 *
 * Return:	SUCCEED/FAIL
 *
 * Programmer:	Quincey Koziol
 *		koziol@ncsa.uiuc.edu
 *		Aug  4 2006
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5HF_delete(H5F_t *f, hid_t dxpl_id, haddr_t fh_addr)
{
    H5HF_hdr_t *hdr = NULL;             /* The fractal heap header information */
    herr_t ret_value = SUCCEED;

    FUNC_ENTER_NOAPI(H5HF_delete, FAIL)

    /*
     * Check arguments.
     */
    HDassert(f);
    HDassert(H5F_addr_defined(fh_addr));

    /* Lock the heap header into memory */
#ifdef QAK
HDfprintf(stderr, "%s: fh_addr = %a\n", FUNC, fh_addr);
#endif /* QAK */
    if(NULL == (hdr = (H5HF_hdr_t *)H5AC_protect(f, dxpl_id, H5AC_FHEAP_HDR, fh_addr, NULL, NULL, H5AC_WRITE)))
        HGOTO_ERROR(H5E_HEAP, H5E_CANTLOAD, FAIL, "unable to load fractal heap header")

    /* Check for files using shared heap header */
    if(hdr->file_rc)
        hdr->pending_delete = TRUE;
    else {
        /* Set the shared heap header's file context for this operation */
        hdr->f = f;

        /* Delete heap now, starting with header (unprotects header) */
        if(H5HF_hdr_delete(hdr, dxpl_id) < 0)
            HGOTO_ERROR(H5E_HEAP, H5E_CANTDELETE, FAIL, "unable to delete fractal heap")
        hdr = NULL;
    } /* end if */

done:
    /* Unprotect the header, if an error occurred */
    if(hdr && H5AC_unprotect(f, dxpl_id, H5AC_FHEAP_HDR, fh_addr, hdr, H5AC__NO_FLAGS_SET) < 0)
        HDONE_ERROR(H5E_HEAP, H5E_CANTUNPROTECT, FAIL, "unable to release fractal heap header")

    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5HF_delete() */

fill2->buf != NULL) HGOTO_DONE(-1); if(fill1->buf != NULL && fill2->buf == NULL) HGOTO_DONE(1); if(fill1->buf != NULL) if((cmp_value = HDmemcmp(fill1->buf, fill2->buf, (size_t)fill1->size)) != 0) HGOTO_DONE(cmp_value); /* Check the allocation time for the fill values */ if(fill1->alloc_time < fill2->alloc_time) HGOTO_DONE(-1); if(fill1->alloc_time > fill2->alloc_time) HGOTO_DONE(1); /* Check the fill time for the fill values */ if(fill1->fill_time < fill2->fill_time) HGOTO_DONE(-1); if(fill1->fill_time > fill2->fill_time) HGOTO_DONE(1); done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5P_fill_value_cmp() */ /*------------------------------------------------------------------------- * Function: H5P_dcrt_ext_file_list_cmp * * Purpose: Callback routine which is called whenever the external file * list property in the dataset creation property list is * compared. * * Return: positive if VALUE1 is greater than VALUE2, negative if * VALUE2 is greater than VALUE1 and zero if VALUE1 and * VALUE2 are equal. * * Programmer: Quincey Koziol * Wednesday, January 7, 2004 * *------------------------------------------------------------------------- */ static int H5P_dcrt_ext_file_list_cmp(const void *_efl1, const void *_efl2, size_t UNUSED size) { const H5O_efl_t *efl1 = (const H5O_efl_t *)_efl1, /* Create local aliases for values */ *efl2 = (const H5O_efl_t *)_efl2; int cmp_value; /* Value from comparison */ herr_t ret_value = 0; /* Return value */ FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5P_dcrt_ext_file_list_cmp) /* Sanity check */ HDassert(efl1); HDassert(efl2); HDassert(size == sizeof(H5O_efl_t)); /* Check the heap address of external file lists */ if(H5F_addr_defined(efl1->heap_addr) || H5F_addr_defined(efl2->heap_addr)) { if(!H5F_addr_defined(efl1->heap_addr) && H5F_addr_defined(efl2->heap_addr)) HGOTO_DONE(-1); if(H5F_addr_defined(efl1->heap_addr) && !H5F_addr_defined(efl2->heap_addr)) HGOTO_DONE(1); if((cmp_value = H5F_addr_cmp(efl1->heap_addr, efl2->heap_addr)) != 0) HGOTO_DONE(cmp_value); } /* end if */ /* Check the number of allocated efl entries */ if(efl1->nalloc < efl2->nalloc) HGOTO_DONE(-1); if(efl1->nalloc > efl2->nalloc) HGOTO_DONE(1); /* Check the number of used efl entries */ if(efl1->nused < efl2->nused) HGOTO_DONE(-1); if(efl1->nused > efl2->nused) HGOTO_DONE(1); /* Check the efl entry information */ if(efl1->slot == NULL && efl2->slot != NULL) HGOTO_DONE(-1); if(efl1->slot != NULL && efl2->slot == NULL) HGOTO_DONE(1); if(efl1->slot != NULL && efl1->nused > 0) { size_t u; /* Local index variable */ /* Loop through all entries, comparing them */ for(u = 0; u < efl1->nused; u++) { /* Check the name offset of the efl entry */ if(efl1->slot[u].name_offset < efl2->slot[u].name_offset) HGOTO_DONE(-1); if(efl1->slot[u].name_offset > efl2->slot[u].name_offset) HGOTO_DONE(1); /* Check the name of the efl entry */ if(efl1->slot[u].name == NULL && efl2->slot[u].name != NULL) HGOTO_DONE(-1); if(efl1->slot[u].name != NULL && efl2->slot[u].name == NULL) HGOTO_DONE(1); if(efl1->slot[u].name != NULL) if((cmp_value = HDstrcmp(efl1->slot[u].name, efl2->slot[u].name)) != 0) HGOTO_DONE(cmp_value); /* Check the file offset of the efl entry */ if(efl1->slot[u].offset < efl2->slot[u].offset) HGOTO_DONE(-1); if(efl1->slot[u].offset > efl2->slot[u].offset) HGOTO_DONE(1); /* Check the file size of the efl entry */ if(efl1->slot[u].size < efl2->slot[u].size) HGOTO_DONE(-1); if(efl1->slot[u].size > efl2->slot[u].size) HGOTO_DONE(1); } /* end for */ } /* end if */ done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5P_dcrt_ext_file_list_cmp() */ /*------------------------------------------------------------------------- * Function: H5P_set_layout * * Purpose: Sets the layout of raw data in the file. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * Tuesday, November 23, 2004 * *------------------------------------------------------------------------- */ static herr_t H5P_set_layout(H5P_genplist_t *plist, const H5O_layout_t *layout) { unsigned alloc_time_state; /* State of allocation time property */ herr_t ret_value = SUCCEED; /* return value */ FUNC_ENTER_NOAPI_NOINIT(H5P_set_layout) /* Get the allocation time state */ if(H5P_get(plist, H5D_CRT_ALLOC_TIME_STATE_NAME, &alloc_time_state) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get space allocation time state") /* If we still have the "default" allocation time, change it according to the new layout */ if(alloc_time_state) { H5O_fill_t fill; /* Fill value */ /* Get current fill value info */ if(H5P_get(plist, H5D_CRT_FILL_VALUE_NAME, &fill) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get fill value") /* Set the default based on layout */ switch(layout->type) { case H5D_COMPACT: fill.alloc_time = H5D_ALLOC_TIME_EARLY; break; case H5D_CONTIGUOUS: fill.alloc_time = H5D_ALLOC_TIME_LATE; break; case H5D_CHUNKED: fill.alloc_time = H5D_ALLOC_TIME_INCR; break; default: HGOTO_ERROR(H5E_DATASET, H5E_UNSUPPORTED, FAIL, "unknown layout type") } /* end switch */ /* Set updated fill value info */ if(H5P_set(plist, H5D_CRT_FILL_VALUE_NAME, &fill) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTSET, FAIL, "can't set space allocation time") } /* end if */ /* Set layout value */ if(H5P_set(plist, H5D_CRT_LAYOUT_NAME, layout) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTINIT, FAIL, "can't set layout") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5P_set_layout() */ #ifndef H5_HAVE_C99_DESIGNATED_INITIALIZER /*------------------------------------------------------------------------- * Function: H5P_init_def_layout * * Purpose: Set the default layout information for the various types of * dataset layouts * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * Tuesday, January 13, 2009 * *------------------------------------------------------------------------- */ static herr_t H5P_init_def_layout(void) { const H5O_layout_chunk_t def_layout_chunk = H5D_DEF_LAYOUT_CHUNK_INIT; const H5O_storage_compact_t def_store_compact = H5D_DEF_STORAGE_COMPACT_INIT; const H5O_storage_chunk_t def_store_chunk = H5D_DEF_STORAGE_CHUNK_INIT; FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5P_init_def_layout) /* Initialize the default layout info for non-contigous layouts */ H5D_def_layout_compact_g.storage.u.compact = def_store_compact; H5D_def_layout_chunk_g.u.chunk = def_layout_chunk; H5D_def_layout_chunk_g.storage.u.chunk = def_store_chunk; /* Note that we've initialized the default values */ H5P_dcrt_def_layout_init_g = TRUE; FUNC_LEAVE_NOAPI(SUCCEED) } /* end H5P_init_def_layout() */ #endif /* H5_HAVE_C99_DESIGNATED_INITIALIZER */ /*------------------------------------------------------------------------- * Function: H5Pset_layout * * Purpose: Sets the layout of raw data in the file. * * Return: Non-negative on success/Negative on failure * * Programmer: Robb Matzke * Tuesday, January 6, 1998 * * Modifications: * * Raymond Lu * Tuesday, October 2, 2001 * Changed the way to check parameter and set property for * generic property list. * *------------------------------------------------------------------------- */ herr_t H5Pset_layout(hid_t plist_id, H5D_layout_t layout_type) { H5P_genplist_t *plist; /* Property list pointer */ const H5O_layout_t *layout; /* Pointer to default layout information for type specified */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_API(H5Pset_layout, FAIL) H5TRACE2("e", "iDl", plist_id, layout_type); /* Check arguments */ if(layout_type < 0 || layout_type >= H5D_NLAYOUTS) HGOTO_ERROR(H5E_ARGS, H5E_BADRANGE, FAIL, "raw data layout method is not valid") /* Get the plist structure */ if(NULL == (plist = H5P_object_verify(plist_id, H5P_DATASET_CREATE))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") #ifndef H5_HAVE_C99_DESIGNATED_INITIALIZER /* If the compiler doesn't support C99 designated initializers, check if * the default layout structs have been initialized yet or not. *ick* -QAK */ if(!H5P_dcrt_def_layout_init_g) if(H5P_init_def_layout() < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTINIT, FAIL, "can't initialize default layout info") #endif /* H5_HAVE_C99_DESIGNATED_INITIALIZER */ /* Get pointer to correct default layout */ switch(layout_type) { case H5D_COMPACT: layout = &H5D_def_layout_compact_g; break; case H5D_CONTIGUOUS: layout = &H5D_def_layout_contig_g; break; case H5D_CHUNKED: layout = &H5D_def_layout_chunk_g; break; default: HGOTO_ERROR(H5E_DATASET, H5E_UNSUPPORTED, FAIL, "unknown layout type") } /* end switch */ /* Set value */ if(H5P_set_layout(plist, layout) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTINIT, FAIL, "can't set layout") done: FUNC_LEAVE_API(ret_value) } /* end H5Pset_layout() */ /*------------------------------------------------------------------------- * Function: H5Pget_layout * * Purpose: Retrieves layout type of a dataset creation property list. * * Return: Success: The layout type * * Failure: H5D_LAYOUT_ERROR (negative) * * Programmer: Robb Matzke * Wednesday, January 7, 1998 * * Modifications: * * Raymond Lu * Tuesday, October 2, 2001 * Changed the way to check parameter and get property for * generic property list. * *------------------------------------------------------------------------- */ H5D_layout_t H5Pget_layout(hid_t plist_id) { H5P_genplist_t *plist; /* Property list pointer */ H5O_layout_t layout; /* Layout property */ H5D_layout_t ret_value; /* Return value */ FUNC_ENTER_API(H5Pget_layout, H5D_LAYOUT_ERROR) H5TRACE1("Dl", "i", plist_id); /* Get the plist structure */ if(NULL == (plist = H5P_object_verify(plist_id, H5P_DATASET_CREATE))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, H5D_LAYOUT_ERROR, "can't find object for ID") /* Get layout property */ if(H5P_get(plist, H5D_CRT_LAYOUT_NAME, &layout) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, H5D_LAYOUT_ERROR, "can't get layout") /* Set return value */ ret_value = layout.type; done: FUNC_LEAVE_API(ret_value) } /* ed H5Pget_layout() */ /*------------------------------------------------------------------------- * Function: H5Pset_chunk * * Purpose: Sets the number of dimensions and the size of each chunk to * the values specified. The dimensionality of the chunk should * match the dimensionality of the dataspace. * * As a side effect, the layout method is changed to * H5D_CHUNKED. * * Return: Non-negative on success/Negative on failure * * Programmer: Robb Matzke * Tuesday, January 6, 1998 * * Modifications: * * Raymond Lu * Tuesday, October 2, 2001 * Changed the way to check parameter and set property for * generic property list. * *------------------------------------------------------------------------- */ herr_t H5Pset_chunk(hid_t plist_id, int ndims, const hsize_t dim[/*ndims*/]) { H5P_genplist_t *plist; /* Property list pointer */ H5O_layout_t chunk_layout; /* Layout information for setting chunk info */ uint64_t chunk_nelmts; /* Number of elements in chunk */ unsigned u; /* Local index variable */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_API(H5Pset_chunk, FAIL) H5TRACE3("e", "iIs*[a1]h", plist_id, ndims, dim); /* Check arguments */ if(ndims <= 0) HGOTO_ERROR(H5E_ARGS, H5E_BADRANGE, FAIL, "chunk dimensionality must be positive") if(ndims > H5S_MAX_RANK) HGOTO_ERROR(H5E_ARGS, H5E_BADRANGE, FAIL, "chunk dimensionality is too large") if(!dim) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no chunk dimensions specified") #ifndef H5_HAVE_C99_DESIGNATED_INITIALIZER /* If the compiler doesn't support C99 designated initializers, check if * the default layout structs have been initialized yet or not. *ick* -QAK */ if(!H5P_dcrt_def_layout_init_g) if(H5P_init_def_layout() < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTINIT, FAIL, "can't initialize default layout info") #endif /* H5_HAVE_C99_DESIGNATED_INITIALIZER */ /* Verify & initialize property's chunk dims */ HDmemcpy(&chunk_layout, &H5D_def_layout_chunk_g, sizeof(H5D_def_layout_chunk_g)); HDmemset(&chunk_layout.u.chunk.dim, 0, sizeof(chunk_layout.u.chunk.dim)); chunk_nelmts = 1; for(u = 0; u < (unsigned)ndims; u++) { if(dim[u] == 0) HGOTO_ERROR(H5E_ARGS, H5E_BADRANGE, FAIL, "all chunk dimensions must be positive") if(dim[u] != (dim[u] & 0xffffffff)) HGOTO_ERROR(H5E_ARGS, H5E_BADRANGE, FAIL, "all chunk dimensions must be less than 2^32") chunk_nelmts *= dim[u]; if(chunk_nelmts > (uint64_t)0xffffffff) HGOTO_ERROR(H5E_ARGS, H5E_BADRANGE, FAIL, "number of elements in chunk must be < 4GB") chunk_layout.u.chunk.dim[u] = (uint32_t)dim[u]; /* Store user's chunk dimensions */ } /* end for */ /* Get the plist structure */ if(NULL == (plist = H5P_object_verify(plist_id, H5P_DATASET_CREATE))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") /* Set chunk information in property list */ chunk_layout.u.chunk.ndims = (unsigned)ndims; if(H5P_set_layout(plist, &chunk_layout) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTSET, FAIL, "can't set layout") done: FUNC_LEAVE_API(ret_value) } /* end H5Pset_chunk() */ /*------------------------------------------------------------------------- * Function: H5Pget_chunk * * Purpose: Retrieves the chunk size of chunked layout. The chunk * dimensionality is returned and the chunk size in each * dimension is returned through the DIM argument. At most * MAX_NDIMS elements of DIM will be initialized. * * Return: Success: Positive Chunk dimensionality. * * Failure: Negative * * Programmer: Robb Matzke * Wednesday, January 7, 1998 * * Modifications: * * Raymond Lu * Tuesday, October 2, 2001 * Changed the way to check parameter and set property for * generic property list. * *------------------------------------------------------------------------- */ int H5Pget_chunk(hid_t plist_id, int max_ndims, hsize_t dim[]/*out*/) { H5P_genplist_t *plist; /* Property list pointer */ H5O_layout_t layout; /* Layout information */ int ret_value; /* Return value */ FUNC_ENTER_API(H5Pget_chunk, FAIL) H5TRACE3("Is", "iIsx", plist_id, max_ndims, dim); /* Get the plist structure */ if(NULL == (plist = H5P_object_verify(plist_id, H5P_DATASET_CREATE))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") /* Retrieve the layout property */ if(H5P_get(plist, H5D_CRT_LAYOUT_NAME, &layout) < 0) HGOTO_ERROR(H5E_PLIST, H5E_BADVALUE, FAIL, "can't get layout") if(H5D_CHUNKED != layout.type) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a chunked storage layout") if(dim) { unsigned u; /* Local index variable */ /* Get the dimension sizes */ for(u = 0; u < layout.u.chunk.ndims && u < (unsigned)max_ndims; u++) dim[u] = layout.u.chunk.dim[u]; } /* end if */ /* Set the return value */ ret_value = (int)layout.u.chunk.ndims; done: FUNC_LEAVE_API(ret_value) } /* end H5Pget_chunk() */ /*------------------------------------------------------------------------- * Function: H5Pset_external * * Purpose: Adds an external file to the list of external files. PLIST_ID * should be an object ID for a dataset creation property list. * NAME is the name of an external file, OFFSET is the location * where the data starts in that file, and SIZE is the number of * bytes reserved in the file for the data. * * If a dataset is split across multiple files then the files * should be defined in order. The total size of the dataset is * the sum of the SIZE arguments for all the external files. If * the total size is larger than the size of a dataset then the * dataset can be extended (provided the dataspace also allows * the extending). * * Return: Non-negative on success/Negative on failure * * Programmer: Robb Matzke * Tuesday, March 3, 1998 * * Modifications: * * Raymond Lu * Tuesday, October 2, 2001 * Changed the way to check parameter and set property for * generic property list. * *------------------------------------------------------------------------- */ herr_t H5Pset_external(hid_t plist_id, const char *name, off_t offset, hsize_t size) { size_t idx; hsize_t total, tmp; H5O_efl_t efl; H5P_genplist_t *plist; /* Property list pointer */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_API(H5Pset_external, FAIL) H5TRACE4("e", "i*soh", plist_id, name, offset, size); /* Check arguments */ if (!name || !*name) HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, FAIL, "no name given") if (offset<0) HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, FAIL, "negative external file offset") if (size<=0) HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, FAIL, "zero size") /* Get the plist structure */ if(NULL == (plist = H5P_object_verify(plist_id, H5P_DATASET_CREATE))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") if(H5P_get(plist, H5D_CRT_EXT_FILE_LIST_NAME, &efl) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get external file list") if(efl.nused > 0 && H5O_EFL_UNLIMITED==efl.slot[efl.nused-1].size) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "previous file size is unlimited") if (H5O_EFL_UNLIMITED!=size) { for (idx=0, total=size; idx<efl.nused; idx++, total=tmp) { tmp = total + efl.slot[idx].size; if (tmp <= total) HGOTO_ERROR (H5E_EFL, H5E_OVERFLOW, FAIL, "total external data size overflowed") } /* end for */ } /* end if */ /* Add to the list */ if(efl.nused >= efl.nalloc) { size_t na = efl.nalloc + H5O_EFL_ALLOC; H5O_efl_entry_t *x = (H5O_efl_entry_t *)H5MM_realloc(efl.slot, na * sizeof(H5O_efl_entry_t)); if(!x) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed") efl.nalloc = na; efl.slot = x; } /* end if */ idx = efl.nused; efl.slot[idx].name_offset = 0; /*not entered into heap yet*/ efl.slot[idx].name = H5MM_xstrdup (name); efl.slot[idx].offset = offset; efl.slot[idx].size = size; efl.nused++; if(H5P_set(plist, H5D_CRT_EXT_FILE_LIST_NAME, &efl) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTINIT, FAIL, "can't set external file list") done: FUNC_LEAVE_API(ret_value) } /*------------------------------------------------------------------------- * Function: H5Pget_external_count * * Purpose: Returns the number of external files for this dataset. * * Return: Success: Number of external files * * Failure: Negative * * Programmer: Robb Matzke * Tuesday, March 3, 1998 * * Modifications: * * Raymond Lu * Tuesday, October 2, 2001 * Changed the way to check parameter and set property for * generic property list. * *------------------------------------------------------------------------- */ int H5Pget_external_count(hid_t plist_id) { H5O_efl_t efl; H5P_genplist_t *plist; /* Property list pointer */ int ret_value; /* return value */ FUNC_ENTER_API(H5Pget_external_count, FAIL) H5TRACE1("Is", "i", plist_id); /* Get the plist structure */ if(NULL == (plist = H5P_object_verify(plist_id, H5P_DATASET_CREATE))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") /* Get value */ if(H5P_get(plist, H5D_CRT_EXT_FILE_LIST_NAME, &efl) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get external file list") /* Set return value */ ret_value = (int)efl.nused; done: FUNC_LEAVE_API(ret_value) } /* end H5Pget_external_count() */ /*------------------------------------------------------------------------- * Function: H5Pget_external * * Purpose: Returns information about an external file. External files * are numbered from zero to N-1 where N is the value returned * by H5Pget_external_count(). At most NAME_SIZE characters are * copied into the NAME array. If the external file name is * longer than NAME_SIZE with the null terminator, then the * return value is not null terminated (similar to strncpy()). * * If NAME_SIZE is zero or NAME is the null pointer then the * external file name is not returned. If OFFSET or SIZE are * null pointers then the corresponding information is not * returned. * * See Also: H5Pset_external() * * Return: Non-negative on success/Negative on failure * * Programmer: Robb Matzke * Tuesday, March 3, 1998 * * Modifications: * * Raymond Lu * Tuesday, October 2, 2001 * Changed the way to check parameter and get property for * generic property list. * *------------------------------------------------------------------------- */ herr_t H5Pget_external(hid_t plist_id, unsigned idx, size_t name_size, char *name/*out*/, off_t *offset/*out*/, hsize_t *size/*out*/) { H5O_efl_t efl; H5P_genplist_t *plist; /* Property list pointer */ herr_t ret_value = SUCCEED; /* return value */ FUNC_ENTER_API(H5Pget_external, FAIL) H5TRACE6("e", "iIuzxxx", plist_id, idx, name_size, name, offset, size); /* Get the plist structure */ if(NULL == (plist = H5P_object_verify(plist_id, H5P_DATASET_CREATE))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") /* Get value */ if(H5P_get(plist, H5D_CRT_EXT_FILE_LIST_NAME, &efl) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get external file list") if(idx >= efl.nused) HGOTO_ERROR(H5E_ARGS, H5E_BADRANGE, FAIL, "external file index is out of range") /* Return values */ if(name_size>0 && name) HDstrncpy(name, efl.slot[idx].name, name_size); if(offset) *offset = efl.slot[idx].offset; if(size) *size = efl.slot[idx].size; done: FUNC_LEAVE_API(ret_value) } /* end H5Pget_external() */ /*------------------------------------------------------------------------- * Function: H5Pset_szip * * Purpose: Sets the compression method for a permanent or transient * filter pipeline (depending on whether PLIST_ID is a dataset * creation or transfer property list) to H5Z_FILTER_SZIP * Szip is a special compression package that is said to be good * for scientific data. * * Return: Non-negative on success/Negative on failure * * Programmer: Kent Yang * Tuesday, April 1, 2003 * * Modifications: * * Nat Furrer and James Laird * June 30, 2004 * Now ensures that SZIP encoding is enabled * SZIP defaults to k13 compression * *------------------------------------------------------------------------- */ herr_t H5Pset_szip(hid_t plist_id, unsigned options_mask, unsigned pixels_per_block) { H5O_pline_t pline; H5P_genplist_t *plist; /* Property list pointer */ unsigned cd_values[2]; /* Filter parameters */ unsigned int config_flags; herr_t ret_value=SUCCEED; /* return value */ FUNC_ENTER_API(H5Pset_szip, FAIL) H5TRACE3("e", "iIuIu", plist_id, options_mask, pixels_per_block); if(H5Zget_filter_info(H5Z_FILTER_SZIP, &config_flags) < 0) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "can't get filter info") if(! (config_flags & H5Z_FILTER_CONFIG_ENCODE_ENABLED)) HGOTO_ERROR(H5E_PLINE, H5E_NOENCODER, FAIL, "Filter present but encoding is disabled.") /* Check arguments */ if ((pixels_per_block%2)==1) HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, FAIL, "pixels_per_block is not even") if (pixels_per_block>H5_SZIP_MAX_PIXELS_PER_BLOCK) HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, FAIL, "pixels_per_block is too large") /* Get the plist structure */ if(NULL == (plist = H5P_object_verify(plist_id,H5P_DATASET_CREATE))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") /* Always set K13 compression (and un-set CHIP compression) */ options_mask &= (~H5_SZIP_CHIP_OPTION_MASK); options_mask |= H5_SZIP_ALLOW_K13_OPTION_MASK; /* Always set "raw" (no szip header) flag for data */ options_mask |= H5_SZIP_RAW_OPTION_MASK; /* Mask off the LSB and MSB options, if they were given */ /* (The HDF5 library sets them internally, as needed) */ options_mask &= ~(H5_SZIP_LSB_OPTION_MASK|H5_SZIP_MSB_OPTION_MASK); /* Set the parameters for the filter */ cd_values[0]=options_mask; cd_values[1]=pixels_per_block; /* Add the filter */ if(H5P_get(plist, H5O_CRT_PIPELINE_NAME, &pline) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get pipeline") if(H5Z_append(&pline, H5Z_FILTER_SZIP, H5Z_FLAG_OPTIONAL, (size_t)2, cd_values) < 0) HGOTO_ERROR(H5E_PLINE, H5E_CANTINIT, FAIL, "unable to add szip filter to pipeline") if(H5P_set(plist, H5O_CRT_PIPELINE_NAME, &pline) < 0) HGOTO_ERROR(H5E_PLINE, H5E_CANTINIT, FAIL, "unable to set pipeline") done: FUNC_LEAVE_API(ret_value) } /* end H5Pset_szip() */ /*------------------------------------------------------------------------- * Function: H5Pset_shuffle * * Purpose: Sets the shuffling method for a permanent * filter to H5Z_FILTER_SHUFFLE * and bytes of the datatype of the array to be shuffled * * Return: Non-negative on success/Negative on failure * * Programmer: Kent Yang * Wednesday, November 13, 2002 * * Modifications: * *------------------------------------------------------------------------- */ herr_t H5Pset_shuffle(hid_t plist_id) { H5O_pline_t pline; H5P_genplist_t *plist; /* Property list pointer */ herr_t ret_value=SUCCEED; /* return value */ FUNC_ENTER_API(H5Pset_shuffle, FAIL) H5TRACE1("e", "i", plist_id); /* Check arguments */ if(TRUE != H5P_isa_class(plist_id, H5P_DATASET_CREATE)) HGOTO_ERROR (H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataset creation property list") /* Get the plist structure */ if(NULL == (plist = (H5P_genplist_t *)H5I_object(plist_id))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") /* Add the filter */ if(H5P_get(plist, H5O_CRT_PIPELINE_NAME, &pline) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get pipeline") if(H5Z_append(&pline, H5Z_FILTER_SHUFFLE, H5Z_FLAG_OPTIONAL, (size_t)0, NULL) < 0) HGOTO_ERROR(H5E_PLINE, H5E_CANTINIT, FAIL, "unable to shuffle the data") if(H5P_set(plist, H5O_CRT_PIPELINE_NAME, &pline) < 0) HGOTO_ERROR(H5E_PLINE, H5E_CANTINIT, FAIL, "unable to set pipeline") done: FUNC_LEAVE_API(ret_value) } /* end H5Pset_shuffle() */ /*------------------------------------------------------------------------- * Function: H5Pset_nbit * * Purpose: Sets nbit filter for a dataset creation property list * * Return: Non-negative on success/Negative on failure * * Programmer: Xiaowen Wu * Wednesday, December 22, 2004 * * Modifications: * * *------------------------------------------------------------------------- */ herr_t H5Pset_nbit(hid_t plist_id) { H5O_pline_t pline; H5P_genplist_t *plist; /* Property list pointer */ herr_t ret_value=SUCCEED; /* return value */ FUNC_ENTER_API(H5Pset_nbit, FAIL) H5TRACE1("e", "i", plist_id); /* Check arguments */ if(TRUE != H5P_isa_class(plist_id, H5P_DATASET_CREATE)) HGOTO_ERROR (H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataset creation property list") /* Get the plist structure */ if(NULL == (plist = (H5P_genplist_t *)H5I_object(plist_id))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") /* Add the nbit filter */ if(H5P_get(plist, H5O_CRT_PIPELINE_NAME, &pline) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get pipeline") if(H5Z_append(&pline, H5Z_FILTER_NBIT, H5Z_FLAG_OPTIONAL, (size_t)0, NULL) < 0) HGOTO_ERROR(H5E_PLINE, H5E_CANTINIT, FAIL, "unable to add nbit filter to pipeline") if(H5P_set(plist, H5O_CRT_PIPELINE_NAME, &pline) < 0) HGOTO_ERROR(H5E_PLINE, H5E_CANTINIT, FAIL, "unable to set pipeline") done: FUNC_LEAVE_API(ret_value) } /* end H5Pset_nbit() */ /*------------------------------------------------------------------------- * Function: H5Pset_scaleoffset * * Purpose: Sets scaleoffset filter for a dataset creation property list * and user-supplied parameters * * Parameters: scale_factor: for integer datatype, this parameter will be minimum-bits, if this value is set to 0, scaleoffset filter will calculate the minimum-bits. For floating-point datatype, For variable-minimum-bits method, this will be the decimal precision of the filter, For fixed-minimum-bits method, this will be the minimum-bit of the filter. scale_type: 0 for floating-point variable-minimum-bits, 1 for floating-point fixed-minimum-bits, other values, for integer datatype * Return: Non-negative on success/Negative on failure * * Programmer: Xiaowen Wu * Thursday, April 14, 2005 * * Modifications: * * *------------------------------------------------------------------------- */ herr_t H5Pset_scaleoffset(hid_t plist_id, H5Z_SO_scale_type_t scale_type, int scale_factor) { H5O_pline_t pline; H5P_genplist_t *plist; /* Property list pointer */ unsigned cd_values[2]; /* Filter parameters */ herr_t ret_value=SUCCEED; /* return value */ FUNC_ENTER_API(H5Pset_scaleoffset, FAIL) H5TRACE3("e", "iZaIs", plist_id, scale_type, scale_factor); /* Check arguments */ if(TRUE != H5P_isa_class(plist_id, H5P_DATASET_CREATE)) HGOTO_ERROR (H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataset creation property list") if(scale_factor < 0) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "scale factor must be > 0") if(scale_type!=H5Z_SO_FLOAT_DSCALE && scale_type!=H5Z_SO_FLOAT_ESCALE && scale_type!=H5Z_SO_INT) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid scale type") /* Get the plist structure */ if(NULL == (plist = (H5P_genplist_t *)H5I_object(plist_id))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") /* Set parameters for the filter * scale_type = 0: floating-point type, filter uses variable-minimum-bits method, * scale_factor is decimal scale factor * scale_type = 1: floating-point type, filter uses fixed-minimum-bits method, * scale_factor is the fixed minimum number of bits * scale type = other: integer type, scale_factor is minimum number of bits * if scale_factor = 0, then filter calculates minimum number of bits */ cd_values[0] = scale_type; cd_values[1] = (unsigned)scale_factor; /* Add the scaleoffset filter */ if(H5P_get(plist, H5O_CRT_PIPELINE_NAME, &pline) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get pipeline") if(H5Z_append(&pline, H5Z_FILTER_SCALEOFFSET, H5Z_FLAG_OPTIONAL, (size_t)2, cd_values) < 0) HGOTO_ERROR(H5E_PLINE, H5E_CANTINIT, FAIL, "unable to add scaleoffset filter to pipeline") if(H5P_set(plist, H5O_CRT_PIPELINE_NAME, &pline) < 0) HGOTO_ERROR(H5E_PLINE, H5E_CANTINIT, FAIL, "unable to set pipeline") done: FUNC_LEAVE_API(ret_value) } /* end H5Pset_scaleoffset() */ /*------------------------------------------------------------------------- * Function: H5Pset_fill_value * * Purpose: Set the fill value for a dataset creation property list. The * VALUE is interpretted as being of type TYPE, which need not * be the same type as the dataset but the library must be able * to convert VALUE to the dataset type when the dataset is * created. If VALUE is NULL, it will be interpreted as * undefining fill value. * * Return: Non-negative on success/Negative on failure * * Programmer: Robb Matzke * Thursday, October 1, 1998 * * Modifications: * * Raymond Lu * Tuesday, October 2, 2001 * Changed the way to check parameter and set property for * generic property list. * *------------------------------------------------------------------------- */ herr_t H5Pset_fill_value(hid_t plist_id, hid_t type_id, const void *value) { H5P_genplist_t *plist; /* Property list pointer */ H5O_fill_t fill; /* Fill value to modify */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_API(H5Pset_fill_value, FAIL) H5TRACE3("e", "ii*x", plist_id, type_id, value); /* Get the plist structure */ if(NULL == (plist = H5P_object_verify(plist_id,H5P_DATASET_CREATE))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") /* Get the current fill value */ if(H5P_get(plist, H5D_CRT_FILL_VALUE_NAME, &fill) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get fill value") /* Release the dynamic fill value components */ H5O_fill_reset_dyn(&fill); if(value) { H5T_t *type; /* Datatype for fill value */ H5T_path_t *tpath; /* Conversion information */ /* Retrieve pointer to datatype */ if(NULL == (type = (H5T_t *)H5I_object_verify(type_id, H5I_DATATYPE))) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a datatype") /* Set the fill value */ if(NULL == (fill.type = H5T_copy(type, H5T_COPY_TRANSIENT))) HGOTO_ERROR(H5E_PLIST, H5E_CANTCOPY, FAIL, "can't copy datatype") fill.size = (ssize_t)H5T_get_size(type); if(NULL == (fill.buf = H5MM_malloc((size_t)fill.size))) HGOTO_ERROR(H5E_RESOURCE, H5E_CANTINIT, FAIL, "memory allocation failed for fill value") HDmemcpy(fill.buf, value, (size_t)fill.size); /* Set up type conversion function */ if(NULL == (tpath = H5T_path_find(type, type, NULL, NULL, H5AC_ind_dxpl_id, FALSE))) HGOTO_ERROR(H5E_DATASET, H5E_UNSUPPORTED, FAIL, "unable to convert between src and dest data types") /* If necessary, convert fill value datatypes (which copies VL components, etc.) */ if(!H5T_path_noop(tpath)) { uint8_t *bkg_buf = NULL; /* Background conversion buffer */ /* Allocate a background buffer */ if(H5T_path_bkg(tpath) && NULL == (bkg_buf = H5FL_BLK_CALLOC(type_conv, (size_t)fill.size))) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed") /* Convert the fill value */ if(H5T_convert(tpath, type_id, type_id, (size_t)1, (size_t)0, (size_t)0, fill.buf, bkg_buf, H5AC_ind_dxpl_id) < 0) { if(bkg_buf) (void)H5FL_BLK_FREE(type_conv, bkg_buf); HGOTO_ERROR(H5E_DATASET, H5E_CANTCONVERT, FAIL, "datatype conversion failed") } /* end if */ /* Release the background buffer */ if(bkg_buf) (void)H5FL_BLK_FREE(type_conv, bkg_buf); } /* end if */ } /* end if */ else fill.size = (-1); /* Update fill value in property list */ if(H5P_set(plist, H5D_CRT_FILL_VALUE_NAME, &fill) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't set fill value") done: FUNC_LEAVE_API(ret_value) } /* end H5Pset_fill_value() */ /*------------------------------------------------------------------------- * Function: H5P_get_fill_value * * Purpose: Queries the fill value property of a dataset creation * property list. The fill value is returned through the VALUE * pointer and the memory is allocated by the caller. The fill * value will be converted from its current datatype to the * specified TYPE. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * Wednesday, October 17, 2007 * *------------------------------------------------------------------------- */ herr_t H5P_get_fill_value(H5P_genplist_t *plist, const H5T_t *type, void *value/*out*/, hid_t dxpl_id) { H5O_fill_t fill; /* Fill value to retrieve */ H5T_path_t *tpath; /*type conversion info */ void *buf = NULL; /*conversion buffer */ void *bkg = NULL; /*conversion buffer */ hid_t src_id = -1; /*source datatype id */ hid_t dst_id = -1; /*destination datatype id */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5P_get_fill_value, FAIL) /* * If no fill value is defined then return an error. We can't even * return zero because we don't know the datatype of the dataset and * datatype conversion might not have resulted in zero. If fill value * is undefined, also return error. */ if(H5P_get(plist, H5D_CRT_FILL_VALUE_NAME, &fill) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get fill value") if(fill.size == -1) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "fill value is undefined") /* Check for "default" fill value */ if(fill.size == 0) { HDmemset(value, 0, H5T_get_size(type)); HGOTO_DONE(SUCCEED); } /* end if */ /* * Can we convert between the source and destination datatypes? */ if(NULL == (tpath = H5T_path_find(fill.type, type, NULL, NULL, dxpl_id, FALSE))) HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, "unable to convert between src and dst datatypes") if((src_id = H5I_register(H5I_DATATYPE, H5T_copy(fill.type, H5T_COPY_TRANSIENT), FALSE)) < 0) HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, "unable to copy/register datatype") /* * Data type conversions are always done in place, so we need a buffer * other than the fill value buffer that is large enough for both source * and destination. The app-supplied buffer might do okay. */ if(H5T_get_size(type) >= H5T_get_size(fill.type)) { buf = value; if(H5T_path_bkg(tpath) && NULL == (bkg = H5MM_malloc(H5T_get_size(type)))) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed for type conversion") } /* end if */ else { if(NULL == (buf = H5MM_malloc(H5T_get_size(fill.type)))) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed for type conversion") if(H5T_path_bkg(tpath)) bkg = value; } /* end else */ HDmemcpy(buf, fill.buf, H5T_get_size(fill.type)); /* Do the conversion */ if((dst_id = H5I_register(H5I_DATATYPE, H5T_copy(type, H5T_COPY_TRANSIENT), FALSE)) < 0) HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, "unable to copy/register datatype") if(H5T_convert(tpath, src_id, dst_id, (size_t)1, (size_t)0, (size_t)0, buf, bkg, dxpl_id) < 0) HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, "datatype conversion failed") if(buf != value) HDmemcpy(value, buf, H5T_get_size(type)); done: if(buf != value) H5MM_xfree(buf); if(bkg != value) H5MM_xfree(bkg); if(src_id >= 0) H5I_dec_ref(src_id, FALSE); if(dst_id >= 0) H5I_dec_ref(dst_id, FALSE); FUNC_LEAVE_NOAPI(ret_value) } /* end H5P_get_fill_value() */ /*------------------------------------------------------------------------- * Function: H5Pget_fill_value * * Purpose: Queries the fill value property of a dataset creation * property list. The fill value is returned through the VALUE * pointer and the memory is allocated by the caller. The fill * value will be converted from its current datatype to the * specified TYPE. * * Return: Non-negative on success/Negative on failure * * Programmer: Robb Matzke * Thursday, October 1, 1998 * *------------------------------------------------------------------------- */ herr_t H5Pget_fill_value(hid_t plist_id, hid_t type_id, void *value/*out*/) { H5P_genplist_t *plist; /* Property list pointer */ H5T_t *type; /* Datatype */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_API(H5Pget_fill_value, FAIL) H5TRACE3("e", "iix", plist_id, type_id, value); /* Check arguments */ if(NULL == (type = (H5T_t *)H5I_object_verify(type_id, H5I_DATATYPE))) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a datatype") if(!value) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL,"no fill value output buffer") /* Get the plist structure */ if(NULL == (plist = H5P_object_verify(plist_id, H5P_DATASET_CREATE))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") /* Get the fill value */ if(H5P_get_fill_value(plist, type, value, H5AC_ind_dxpl_id) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get fill value") done: FUNC_LEAVE_API(ret_value) } /* end H5Pget_fill_value() */ /*------------------------------------------------------------------------- * Function: H5P_is_fill_value_defined * * Purpose: Check if fill value is defined. Internal version of function * * Return: Non-negative on success/Negative on failure * * Programmer: Raymond Lu * Wednesday, January 16, 2002 * *------------------------------------------------------------------------- */ herr_t H5P_is_fill_value_defined(const H5O_fill_t *fill, H5D_fill_value_t *status) { herr_t ret_value = SUCCEED; FUNC_ENTER_NOAPI(H5P_is_fill_value_defined, FAIL) HDassert(fill); HDassert(status); /* Check if the fill value was "unset" */ if(fill->size == -1 && !fill->buf) *status = H5D_FILL_VALUE_UNDEFINED; /* Check if the fill value was set to the default fill value by the library */ else if(fill->size == 0 && !fill->buf) *status = H5D_FILL_VALUE_DEFAULT; /* Check if the fill value was set by the application */ else if(fill->size > 0 && fill->buf) *status = H5D_FILL_VALUE_USER_DEFINED; else { *status = H5D_FILL_VALUE_ERROR; HGOTO_ERROR(H5E_PLIST, H5E_BADRANGE, FAIL, "invalid combination of fill-value info") } /* end else */ done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5P_is_fill_value_defined() */ /*------------------------------------------------------------------------- * Function: H5P_fill_value_defined * * Purpose: Check if fill value is defined. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * Wednesday, October 17, 2007 * *------------------------------------------------------------------------- */ herr_t H5P_fill_value_defined(H5P_genplist_t *plist, H5D_fill_value_t *status) { H5O_fill_t fill; /* Fill value to query */ herr_t ret_value = SUCCEED; FUNC_ENTER_NOAPI(H5P_fill_value_defined, FAIL) HDassert(status); /* Get the fill value struct */ if(H5P_get(plist, H5D_CRT_FILL_VALUE_NAME, &fill) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get fill value") /* Get the fill-value status */ if(H5P_is_fill_value_defined(&fill, status) < 0) HGOTO_ERROR(H5E_PLIST, H5E_BADVALUE, FAIL, "can't check fill value status") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5P_fill_value_defined() */ /*------------------------------------------------------------------------- * Function: H5Pfill_value_defined * * Purpose: Check if fill value is defined. * * Return: Non-negative on success/Negative on failure * * Programmer: Raymond Lu * Wednesday, January 16, 2002 * *------------------------------------------------------------------------- */ herr_t H5Pfill_value_defined(hid_t plist_id, H5D_fill_value_t *status) { H5P_genplist_t *plist; /* Property list to query */ herr_t ret_value = SUCCEED; FUNC_ENTER_API(H5Pfill_value_defined, FAIL) H5TRACE2("e", "i*DF", plist_id, status); HDassert(status); /* Get the plist structure */ if(NULL == (plist = H5P_object_verify(plist_id, H5P_DATASET_CREATE))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") /* Get the fill-value status */ if(H5P_fill_value_defined(plist, status) < 0) HGOTO_ERROR(H5E_PLIST, H5E_BADVALUE, FAIL, "can't check fill value status") done: FUNC_LEAVE_API(ret_value) } /* end H5Pfill_value_defined() */ /*------------------------------------------------------------------------- * Function: H5Pset_alloc_time * * Purpose: Set space allocation time for dataset during creation. * Valid values are H5D_ALLOC_TIME_DEFAULT, H5D_ALLOC_TIME_EARLY, * H5D_ALLOC_TIME_LATE, H5D_ALLOC_TIME_INCR * * Return: Non-negative on success/Negative on failure * * Programmer: Raymond Lu * Wednesday, January 16, 2002 * * Modifications: * * *------------------------------------------------------------------------- */ herr_t H5Pset_alloc_time(hid_t plist_id, H5D_alloc_time_t alloc_time) { H5P_genplist_t *plist; /* Property list pointer */ H5O_fill_t fill; /* Fill value property to modify */ unsigned alloc_time_state; /* State of allocation time property */ herr_t ret_value = SUCCEED; /* return value */ FUNC_ENTER_API(H5Pset_alloc_time, FAIL) H5TRACE2("e", "iDa", plist_id, alloc_time); /* Check arguments */ if(alloc_time < H5D_ALLOC_TIME_DEFAULT || alloc_time > H5D_ALLOC_TIME_INCR) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid allocation time setting") /* Get the property list structure */ if(NULL == (plist = H5P_object_verify(plist_id, H5P_DATASET_CREATE))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") /* Check for resetting to default for layout type */ if(alloc_time == H5D_ALLOC_TIME_DEFAULT) { H5O_layout_t layout; /* Type of storage layout */ /* Retrieve the storage layout */ if(H5P_get(plist, H5D_CRT_LAYOUT_NAME, &layout) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get layout") /* Set the default based on layout */ switch(layout.type) { case H5D_COMPACT: alloc_time = H5D_ALLOC_TIME_EARLY; break; case H5D_CONTIGUOUS: alloc_time = H5D_ALLOC_TIME_LATE; break; case H5D_CHUNKED: alloc_time = H5D_ALLOC_TIME_INCR; break; default: HGOTO_ERROR(H5E_DATASET, H5E_UNSUPPORTED, FAIL, "unknown layout type") } /* end switch */ /* Reset the "state" of the allocation time property back to the "default" */ alloc_time_state = 1; } /* end if */ else /* Set the "state" of the allocation time property to indicate the user modified it */ alloc_time_state = 0; /* Retrieve previous fill value settings */ if(H5P_get(plist, H5D_CRT_FILL_VALUE_NAME, &fill) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get fill value") /* Update property value */ fill.alloc_time = alloc_time; /* Set values */ if(H5P_set(plist, H5D_CRT_FILL_VALUE_NAME, &fill) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTSET, FAIL, "can't set fill value") if(H5P_set(plist, H5D_CRT_ALLOC_TIME_STATE_NAME, &alloc_time_state) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTSET, FAIL, "can't set space allocation time") done: FUNC_LEAVE_API(ret_value) } /* H5Pset_alloc_time() */ /*------------------------------------------------------------------------- * Function: H5Pget_alloc_time * * Purpose: Get space allocation time for dataset creation. * Valid values are H5D_ALLOC_TIME_DEFAULT, H5D_ALLOC_TIME_EARLY, * H5D_ALLOC_TIME_LATE, H5D_ALLOC_TIME_INCR * * Return: Non-negative on success/Negative on failure * * Programmer: Raymond Lu * Wednesday, January 16, 2002 * *------------------------------------------------------------------------- */ herr_t H5Pget_alloc_time(hid_t plist_id, H5D_alloc_time_t *alloc_time/*out*/) { herr_t ret_value = SUCCEED; /* return value */ FUNC_ENTER_API(H5Pget_alloc_time, FAIL) H5TRACE2("e", "ix", plist_id, alloc_time); /* Get values */ if(alloc_time) { H5P_genplist_t *plist; /* Property list pointer */ H5O_fill_t fill; /* Fill value property to query */ /* Get the property list structure */ if(NULL == (plist = H5P_object_verify(plist_id, H5P_DATASET_CREATE))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") /* Retrieve fill value settings */ if(H5P_get(plist, H5D_CRT_FILL_VALUE_NAME, &fill) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get fill value") /* Set user's value */ *alloc_time = fill.alloc_time; } /* end if */ done: FUNC_LEAVE_API(ret_value) } /* end H5Pget_alloc_time() */ /*------------------------------------------------------------------------- * Function: H5Pset_fill_time * * Purpose: Set fill value writing time for dataset. Valid values are * H5D_FILL_TIME_ALLOC and H5D_FILL_TIME_NEVER. * * Return: Non-negative on success/Negative on failure * * Programmer: Raymond Lu * Wednesday, January 16, 2002 * *------------------------------------------------------------------------- */ herr_t H5Pset_fill_time(hid_t plist_id, H5D_fill_time_t fill_time) { H5P_genplist_t *plist; /* Property list pointer */ H5O_fill_t fill; /* Fill value property to modify */ herr_t ret_value = SUCCEED; /* return value */ FUNC_ENTER_API(H5Pset_fill_time, FAIL) H5TRACE2("e", "iDf", plist_id, fill_time); /* Check arguments */ if(fill_time < H5D_FILL_TIME_ALLOC || fill_time > H5D_FILL_TIME_IFSET) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid fill time setting") /* Get the property list structure */ if(NULL == (plist = H5P_object_verify(plist_id,H5P_DATASET_CREATE))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") /* Retrieve previous fill value settings */ if(H5P_get(plist, H5D_CRT_FILL_VALUE_NAME, &fill) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get fill value") /* Update property value */ fill.fill_time = fill_time; /* Set values */ if(H5P_set(plist, H5D_CRT_FILL_VALUE_NAME, &fill) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTSET, FAIL, "can't set fill value") done: FUNC_LEAVE_API(ret_value) } /* end H5Pset_fill_time() */ /*------------------------------------------------------------------------- * Function: H5Pget_fill_time * * Purpose: Get fill value writing time. Valid values are H5D_NEVER * and H5D_ALLOC. * * Return: Non-negative on success/Negative on failure * * Programmer: Raymond Lu * Wednesday, January 16, 2002 * * Modifications: * * *------------------------------------------------------------------------- */ herr_t H5Pget_fill_time(hid_t plist_id, H5D_fill_time_t *fill_time/*out*/) { herr_t ret_value = SUCCEED; /* return value */ FUNC_ENTER_API(H5Pget_fill_time, FAIL) H5TRACE2("e", "ix", plist_id, fill_time); /* Set values */ if(fill_time) { H5P_genplist_t *plist; /* Property list pointer */ H5O_fill_t fill; /* Fill value property to query */ /* Get the property list structure */ if(NULL == (plist = H5P_object_verify(plist_id,H5P_DATASET_CREATE))) HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") /* Retrieve fill value settings */ if(H5P_get(plist, H5D_CRT_FILL_VALUE_NAME, &fill) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get fill value") /* Set user's value */ *fill_time = fill.fill_time; } /* end if */ done: FUNC_LEAVE_API(ret_value) } /* end H5Pget_fill_time() */