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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* This file contains function prototypes for each exported function in the
* H5P module.
*/
#ifndef _H5Ppublic_H
#define _H5Ppublic_H
/* System headers needed by this file */
/* Public headers needed by this file */
#include "H5public.h"
#include "H5ACpublic.h"
#include "H5Dpublic.h"
#include "H5Fpublic.h"
#include "H5FDpublic.h"
#include "H5Ipublic.h"
#include "H5Lpublic.h"
#include "H5Opublic.h"
#include "H5MMpublic.h"
#include "H5Tpublic.h"
#include "H5Zpublic.h"
/*****************/
/* Public Macros */
/*****************/
/* When this header is included from a private HDF5 header, don't make calls to H5open() */
#undef H5OPEN
#ifndef _H5private_H
#define H5OPEN H5open(),
#else /* _H5private_H */
#define H5OPEN
#endif /* _H5private_H */
/*
* The library's property list classes
*/
#define H5P_ROOT (H5OPEN H5P_CLS_ROOT_ID_g)
#define H5P_OBJECT_CREATE (H5OPEN H5P_CLS_OBJECT_CREATE_ID_g)
#define H5P_FILE_CREATE (H5OPEN H5P_CLS_FILE_CREATE_ID_g)
#define H5P_FILE_ACCESS (H5OPEN H5P_CLS_FILE_ACCESS_ID_g)
#define H5P_DATASET_CREATE (H5OPEN H5P_CLS_DATASET_CREATE_ID_g)
#define H5P_DATASET_ACCESS (H5OPEN H5P_CLS_DATASET_ACCESS_ID_g)
#define H5P_DATASET_XFER (H5OPEN H5P_CLS_DATASET_XFER_ID_g)
#define H5P_FILE_MOUNT (H5OPEN H5P_CLS_FILE_MOUNT_ID_g)
#define H5P_GROUP_CREATE (H5OPEN H5P_CLS_GROUP_CREATE_ID_g)
#define H5P_GROUP_ACCESS (H5OPEN H5P_CLS_GROUP_ACCESS_ID_g)
#define H5P_DATATYPE_CREATE (H5OPEN H5P_CLS_DATATYPE_CREATE_ID_g)
#define H5P_DATATYPE_ACCESS (H5OPEN H5P_CLS_DATATYPE_ACCESS_ID_g)
#define H5P_MAP_CREATE (H5OPEN H5P_CLS_MAP_CREATE_ID_g)
#define H5P_MAP_ACCESS (H5OPEN H5P_CLS_MAP_ACCESS_ID_g)
#define H5P_STRING_CREATE (H5OPEN H5P_CLS_STRING_CREATE_ID_g)
#define H5P_ATTRIBUTE_CREATE (H5OPEN H5P_CLS_ATTRIBUTE_CREATE_ID_g)
#define H5P_ATTRIBUTE_ACCESS (H5OPEN H5P_CLS_ATTRIBUTE_ACCESS_ID_g)
#define H5P_OBJECT_COPY (H5OPEN H5P_CLS_OBJECT_COPY_ID_g)
#define H5P_LINK_CREATE (H5OPEN H5P_CLS_LINK_CREATE_ID_g)
#define H5P_LINK_ACCESS (H5OPEN H5P_CLS_LINK_ACCESS_ID_g)
#define H5P_VOL_INITIALIZE (H5OPEN H5P_CLS_VOL_INITIALIZE_ID_g)
#define H5P_REFERENCE_ACCESS (H5OPEN H5P_CLS_REFERENCE_ACCESS_ID_g)
/*
* The library's default property lists
*/
#define H5P_FILE_CREATE_DEFAULT (H5OPEN H5P_LST_FILE_CREATE_ID_g)
#define H5P_FILE_ACCESS_DEFAULT (H5OPEN H5P_LST_FILE_ACCESS_ID_g)
#define H5P_DATASET_CREATE_DEFAULT (H5OPEN H5P_LST_DATASET_CREATE_ID_g)
#define H5P_DATASET_ACCESS_DEFAULT (H5OPEN H5P_LST_DATASET_ACCESS_ID_g)
#define H5P_DATASET_XFER_DEFAULT (H5OPEN H5P_LST_DATASET_XFER_ID_g)
#define H5P_FILE_MOUNT_DEFAULT (H5OPEN H5P_LST_FILE_MOUNT_ID_g)
#define H5P_GROUP_CREATE_DEFAULT (H5OPEN H5P_LST_GROUP_CREATE_ID_g)
#define H5P_GROUP_ACCESS_DEFAULT (H5OPEN H5P_LST_GROUP_ACCESS_ID_g)
#define H5P_DATATYPE_CREATE_DEFAULT (H5OPEN H5P_LST_DATATYPE_CREATE_ID_g)
#define H5P_DATATYPE_ACCESS_DEFAULT (H5OPEN H5P_LST_DATATYPE_ACCESS_ID_g)
#define H5P_MAP_CREATE_DEFAULT (H5OPEN H5P_LST_MAP_CREATE_ID_g)
#define H5P_MAP_ACCESS_DEFAULT (H5OPEN H5P_LST_MAP_ACCESS_ID_g)
#define H5P_ATTRIBUTE_CREATE_DEFAULT (H5OPEN H5P_LST_ATTRIBUTE_CREATE_ID_g)
#define H5P_ATTRIBUTE_ACCESS_DEFAULT (H5OPEN H5P_LST_ATTRIBUTE_ACCESS_ID_g)
#define H5P_OBJECT_COPY_DEFAULT (H5OPEN H5P_LST_OBJECT_COPY_ID_g)
#define H5P_LINK_CREATE_DEFAULT (H5OPEN H5P_LST_LINK_CREATE_ID_g)
#define H5P_LINK_ACCESS_DEFAULT (H5OPEN H5P_LST_LINK_ACCESS_ID_g)
#define H5P_VOL_INITIALIZE_DEFAULT (H5OPEN H5P_LST_VOL_INITIALIZE_ID_g)
#define H5P_REFERENCE_ACCESS_DEFAULT (H5OPEN H5P_LST_REFERENCE_ACCESS_ID_g)
/* Common creation order flags (for links in groups and attributes on objects) */
#define H5P_CRT_ORDER_TRACKED 0x0001
#define H5P_CRT_ORDER_INDEXED 0x0002
/* Default value for all property list classes */
#define H5P_DEFAULT (hid_t)0
#ifdef __cplusplus
extern "C" {
#endif
/*******************/
/* Public Typedefs */
/*******************/
/* Define property list class callback function pointer types */
typedef herr_t (*H5P_cls_create_func_t)(hid_t prop_id, void *create_data);
typedef herr_t (*H5P_cls_copy_func_t)(hid_t new_prop_id, hid_t old_prop_id, void *copy_data);
typedef herr_t (*H5P_cls_close_func_t)(hid_t prop_id, void *close_data);
/* Define property list callback function pointer types */
typedef herr_t (*H5P_prp_cb1_t)(const char *name, size_t size, void *value);
typedef herr_t (*H5P_prp_cb2_t)(hid_t prop_id, const char *name, size_t size, void *value);
typedef H5P_prp_cb1_t H5P_prp_create_func_t;
typedef H5P_prp_cb2_t H5P_prp_set_func_t;
typedef H5P_prp_cb2_t H5P_prp_get_func_t;
typedef herr_t (*H5P_prp_encode_func_t)(const void *value, void **buf, size_t *size);
typedef herr_t (*H5P_prp_decode_func_t)(const void **buf, void *value);
typedef H5P_prp_cb2_t H5P_prp_delete_func_t;
typedef H5P_prp_cb1_t H5P_prp_copy_func_t;
typedef int (*H5P_prp_compare_func_t)(const void *value1, const void *value2, size_t size);
typedef H5P_prp_cb1_t H5P_prp_close_func_t;
/* Define property list iteration function type */
typedef herr_t (*H5P_iterate_t)(hid_t id, const char *name, void *iter_data);
/* Actual IO mode property */
typedef enum H5D_mpio_actual_chunk_opt_mode_t {
/* The default value, H5D_MPIO_NO_CHUNK_OPTIMIZATION, is used for all I/O
* operations that do not use chunk optimizations, including non-collective
* I/O and contiguous collective I/O.
*/
H5D_MPIO_NO_CHUNK_OPTIMIZATION = 0,
H5D_MPIO_LINK_CHUNK,
H5D_MPIO_MULTI_CHUNK
} H5D_mpio_actual_chunk_opt_mode_t;
typedef enum H5D_mpio_actual_io_mode_t {
/* The following four values are conveniently defined as a bit field so that
* we can switch from the default to independent or collective and then to
* mixed without having to check the original value.
*
* NO_COLLECTIVE means that either collective I/O wasn't requested or that
* no I/O took place.
*
* CHUNK_INDEPENDENT means that collective I/O was requested, but the
* chunk optimization scheme chose independent I/O for each chunk.
*/
H5D_MPIO_NO_COLLECTIVE = 0x0,
H5D_MPIO_CHUNK_INDEPENDENT = 0x1,
H5D_MPIO_CHUNK_COLLECTIVE = 0x2,
H5D_MPIO_CHUNK_MIXED = 0x1 | 0x2,
/* The contiguous case is separate from the bit field. */
H5D_MPIO_CONTIGUOUS_COLLECTIVE = 0x4
} H5D_mpio_actual_io_mode_t;
/* Broken collective IO property */
typedef enum H5D_mpio_no_collective_cause_t {
H5D_MPIO_COLLECTIVE = 0x00,
H5D_MPIO_SET_INDEPENDENT = 0x01,
H5D_MPIO_DATATYPE_CONVERSION = 0x02,
H5D_MPIO_DATA_TRANSFORMS = 0x04,
H5D_MPIO_MPI_OPT_TYPES_ENV_VAR_DISABLED = 0x08,
H5D_MPIO_NOT_SIMPLE_OR_SCALAR_DATASPACES = 0x10,
H5D_MPIO_NOT_CONTIGUOUS_OR_CHUNKED_DATASET = 0x20,
H5D_MPIO_PARALLEL_FILTERED_WRITES_DISABLED = 0x40,
H5D_MPIO_ERROR_WHILE_CHECKING_COLLECTIVE_POSSIBLE = 0x80,
H5D_MPIO_NO_COLLECTIVE_MAX_CAUSE = 0x100
} H5D_mpio_no_collective_cause_t;
/********************/
/* Public Variables */
/********************/
/* Property list class IDs */
/* (Internal to library, do not use! Use macros above) */
H5_DLLVAR hid_t H5P_CLS_ROOT_ID_g;
H5_DLLVAR hid_t H5P_CLS_OBJECT_CREATE_ID_g;
H5_DLLVAR hid_t H5P_CLS_FILE_CREATE_ID_g;
H5_DLLVAR hid_t H5P_CLS_FILE_ACCESS_ID_g;
H5_DLLVAR hid_t H5P_CLS_DATASET_CREATE_ID_g;
H5_DLLVAR hid_t H5P_CLS_DATASET_ACCESS_ID_g;
H5_DLLVAR hid_t H5P_CLS_DATASET_XFER_ID_g;
H5_DLLVAR hid_t H5P_CLS_FILE_MOUNT_ID_g;
H5_DLLVAR hid_t H5P_CLS_GROUP_CREATE_ID_g;
H5_DLLVAR hid_t H5P_CLS_GROUP_ACCESS_ID_g;
H5_DLLVAR hid_t H5P_CLS_DATATYPE_CREATE_ID_g;
H5_DLLVAR hid_t H5P_CLS_DATATYPE_ACCESS_ID_g;
H5_DLLVAR hid_t H5P_CLS_MAP_CREATE_ID_g;
H5_DLLVAR hid_t H5P_CLS_MAP_ACCESS_ID_g;
H5_DLLVAR hid_t H5P_CLS_STRING_CREATE_ID_g;
H5_DLLVAR hid_t H5P_CLS_ATTRIBUTE_CREATE_ID_g;
H5_DLLVAR hid_t H5P_CLS_ATTRIBUTE_ACCESS_ID_g;
H5_DLLVAR hid_t H5P_CLS_OBJECT_COPY_ID_g;
H5_DLLVAR hid_t H5P_CLS_LINK_CREATE_ID_g;
H5_DLLVAR hid_t H5P_CLS_LINK_ACCESS_ID_g;
H5_DLLVAR hid_t H5P_CLS_VOL_INITIALIZE_ID_g;
H5_DLLVAR hid_t H5P_CLS_REFERENCE_ACCESS_ID_g;
/* Default roperty list IDs */
/* (Internal to library, do not use! Use macros above) */
H5_DLLVAR hid_t H5P_LST_FILE_CREATE_ID_g;
H5_DLLVAR hid_t H5P_LST_FILE_ACCESS_ID_g;
H5_DLLVAR hid_t H5P_LST_DATASET_CREATE_ID_g;
H5_DLLVAR hid_t H5P_LST_DATASET_ACCESS_ID_g;
H5_DLLVAR hid_t H5P_LST_DATASET_XFER_ID_g;
H5_DLLVAR hid_t H5P_LST_FILE_MOUNT_ID_g;
H5_DLLVAR hid_t H5P_LST_GROUP_CREATE_ID_g;
H5_DLLVAR hid_t H5P_LST_GROUP_ACCESS_ID_g;
H5_DLLVAR hid_t H5P_LST_DATATYPE_CREATE_ID_g;
H5_DLLVAR hid_t H5P_LST_DATATYPE_ACCESS_ID_g;
H5_DLLVAR hid_t H5P_LST_MAP_CREATE_ID_g;
H5_DLLVAR hid_t H5P_LST_MAP_ACCESS_ID_g;
H5_DLLVAR hid_t H5P_LST_ATTRIBUTE_CREATE_ID_g;
H5_DLLVAR hid_t H5P_LST_ATTRIBUTE_ACCESS_ID_g;
H5_DLLVAR hid_t H5P_LST_OBJECT_COPY_ID_g;
H5_DLLVAR hid_t H5P_LST_LINK_CREATE_ID_g;
H5_DLLVAR hid_t H5P_LST_LINK_ACCESS_ID_g;
H5_DLLVAR hid_t H5P_LST_VOL_INITIALIZE_ID_g;
H5_DLLVAR hid_t H5P_LST_REFERENCE_ACCESS_ID_g;
/*********************/
/* Public Prototypes */
/*********************/
/* Generic property list routines */
/**
* \ingroup GPLO
*
* \brief Terminates access to a property list
*
* \plist_id
*
* \return \herr_t
*
* \details H5Pclose() terminates access to a property list. All property
* lists should be closed when the application is finished
* accessing them. This frees resources used by the property
* list.
*
* \since 1.0.0
*
*/
H5_DLL herr_t H5Pclose(hid_t plist_id);
/**
* \ingroup GPLO
*
* \brief Creates a new property list as an instance of a property list class
*
* \plistcls_id{cls_id}
*
* \return \hid_t{property list}
*
* \details H5Pcreate() creates a new property list as an instance of
* some property list class. The new property list is initialized
* with default values for the specified class. The classes are as
* follows:
*
* <table>
* <tr>
* <th>Class Identifier</th>
* <th>Class Name</th>
* <th>Comments</th>
* </tr>
* <tr>
* <td>#H5P_ATTRIBUTE_CREATE</td>
* <td>attribute create</td>
* <td>Properties for attribute creation</td>
* </tr>
* <tr>
* <td>#H5P_DATASET_ACCESS</td>
* <td>dataset access</td>
* <td>Properties for dataset access</td>
* </tr>
* <tr>
* <td>#H5P_DATASET_CREATE</td>
* <td>dataset create</td>
* <td>Properties for dataset creation</td>
* </tr>
* <tr>
* <td>#H5P_DATASET_XFER</td>
* <td>data transfer</td>
* <td>Properties for raw data transfer</td>
* </tr>
* <tr>
* <td>#H5P_DATATYPE_ACCESS</td>
* <td>datatype access</td>
* <td>Properties for datatype access</td>
* </tr>
* <tr>
* <td>#H5P_DATATYPE_CREATE</td>
* <td>datatype create</td>
* <td>Properties for datatype creation</td>
* </tr>
* <tr>
* <td>#H5P_FILE_ACCESS</td>
* <td>file access</td>
* <td>Properties for file access</td>
* </tr>
* <tr>
* <td>#H5P_FILE_CREATE</td>
* <td>file create</td>
* <td>Properties for file creation</td>
* </tr>
* <tr>
* <td>#H5P_FILE_MOUNT</td>
* <td>file mount</td>
* <td>Properties for file mounting</td>
* </tr>
* <tr valign="top">
* <td>#H5P_GROUP_ACCESS</td>
* <td>group access</td>
* <td>Properties for group access</td>
* </tr>
* <tr>
* <td>#H5P_GROUP_CREATE</td>
* <td>group create</td>
* <td>Properties for group creation</td>
* </tr>
* <tr>
* <td>#H5P_LINK_ACCESS</td>
* <td>link access</td>
* <td>Properties governing link traversal when accessing objects</td>
* </tr>
* <tr>
* <td>#H5P_LINK_CREATE</td>
* <td>link create</td>
* <td>Properties governing link creation</td>
* </tr>
* <tr>
* <td>#H5P_OBJECT_COPY</td>
* <td>object copy</td>
* <td>Properties governing the object copying process</td>
* </tr>
* <tr>
* <td>#H5P_OBJECT_CREATE</td>
* <td>object create</td>
* <td>Properties for object creation</td>
* </tr>
* <tr>
* <td>#H5P_STRING_CREATE</td>
* <td>string create</td>
* <td>Properties for character encoding when encoding strings or
* object names</td>
* </tr>
* <tr>
* <td>#H5P_VOL_INITIALIZE</td>
* <td>vol initialize</td>
* <td>Properties for VOL initialization</td>
* </tr>
* </table>
*
* This property list must eventually be closed with H5Pclose();
* otherwise, errors are likely to occur.
*
* \version 1.12.0 The #H5P_VOL_INITIALIZE property list class was added
* \version 1.8.15 For each class, the class name returned by
* H5Pget_class_name() was added.
* The list of possible Fortran values was updated.
* \version 1.8.0 The following property list classes were added at this
* release: #H5P_DATASET_ACCESS, #H5P_GROUP_CREATE,
* #H5P_GROUP_ACCESS, #H5P_DATATYPE_CREATE,
* #H5P_DATATYPE_ACCESS, #H5P_ATTRIBUTE_CREATE
*
* \since 1.0.0
*
*/
H5_DLL hid_t H5Pcreate(hid_t cls_id);
H5_DLL hid_t H5Pcreate_class(hid_t parent, const char *name, H5P_cls_create_func_t cls_create,
void *create_data, H5P_cls_copy_func_t cls_copy, void *copy_data,
H5P_cls_close_func_t cls_close, void *close_data);
H5_DLL char * H5Pget_class_name(hid_t pclass_id);
H5_DLL herr_t H5Pregister2(hid_t cls_id, const char *name, size_t size, void *def_value,
H5P_prp_create_func_t prp_create, H5P_prp_set_func_t prp_set,
H5P_prp_get_func_t prp_get, H5P_prp_delete_func_t prp_del,
H5P_prp_copy_func_t prp_copy, H5P_prp_compare_func_t prp_cmp,
H5P_prp_close_func_t prp_close);
H5_DLL herr_t H5Pinsert2(hid_t plist_id, const char *name, size_t size, void *value,
H5P_prp_set_func_t prp_set, H5P_prp_get_func_t prp_get,
H5P_prp_delete_func_t prp_delete, H5P_prp_copy_func_t prp_copy,
H5P_prp_compare_func_t prp_cmp, H5P_prp_close_func_t prp_close);
H5_DLL herr_t H5Pset(hid_t plist_id, const char *name, const void *value);
H5_DLL htri_t H5Pexist(hid_t plist_id, const char *name);
H5_DLL herr_t H5Pencode2(hid_t plist_id, void *buf, size_t *nalloc, hid_t fapl_id);
H5_DLL hid_t H5Pdecode(const void *buf);
H5_DLL herr_t H5Pget_size(hid_t id, const char *name, size_t *size);
H5_DLL herr_t H5Pget_nprops(hid_t id, size_t *nprops);
H5_DLL hid_t H5Pget_class(hid_t plist_id);
H5_DLL hid_t H5Pget_class_parent(hid_t pclass_id);
H5_DLL herr_t H5Pget(hid_t plist_id, const char *name, void *value);
H5_DLL htri_t H5Pequal(hid_t id1, hid_t id2);
H5_DLL htri_t H5Pisa_class(hid_t plist_id, hid_t pclass_id);
H5_DLL int H5Piterate(hid_t id, int *idx, H5P_iterate_t iter_func, void *iter_data);
H5_DLL herr_t H5Pcopy_prop(hid_t dst_id, hid_t src_id, const char *name);
H5_DLL herr_t H5Premove(hid_t plist_id, const char *name);
H5_DLL herr_t H5Punregister(hid_t pclass_id, const char *name);
H5_DLL herr_t H5Pclose_class(hid_t plist_id);
H5_DLL hid_t H5Pcopy(hid_t plist_id);
/* Object creation property list (OCPL) routines */
/**
* \ingroup OCPL
*
* \brief Returns information about a filter in a pipeline
*
* \todo Signature for H5Pget_filter2 is different in H5Pocpl.c than in
* H5Ppublic.h
*
* \plist_id{plist_id}
* \param[in] idx Sequence number within the filter pipeline of the filter
* for which information is sought
* \param[out] flags Bit vector specifying certain general properties of the
* filter
* \param[in,out] cd_nelmts Number of elements in \p cd_values
* \param[out] cd_values Auxiliary data for the filter
* \param[in] namelen Anticipated number of characters in \p name
* \param[out] name Name of the filter
* \param[out] filter_config Bit field, as described in H5Zget_filter_info()
*
* \return Returns a negative value on failure, and the filter identifier
* if successful (see #H5Z_filter_t):
* - #H5Z_FILTER_DEFLATE Data compression filter,
* employing the gzip algorithm
* - #H5Z_FILTER_SHUFFLE Data shuffling filter
* - #H5Z_FILTER_FLETCHER32 Error detection filter, employing the
* Fletcher32 checksum algorithm
* - #H5Z_FILTER_SZIP Data compression filter, employing the
* SZIP algorithm
* - #H5Z_FILTER_NBIT Data compression filter, employing the
* N-bit algorithm
* - #H5Z_FILTER_SCALEOFFSET Data compression filter, employing the
* scale-offset algorithm
*
* \details H5Pget_filter2() returns information about a filter specified by
* its filter number, in a filter pipeline specified by the property
* list with which it is associated.
*
* \p plist_id must be a dataset or group creation property list.
*
* \p idx is a value between zero and N-1, as described in
* H5Pget_nfilters(). The function will return a negative value if
* the filter number is out of range.
*
* The structure of the \p flags argument is discussed in
* H5Pset_filter().
*
* On input, \p cd_nelmts indicates the number of entries in the
* \p cd_values array, as allocated by the caller; on return,
* \p cd_nelmts contains the number of values defined by the filter.
*
* If \p name is a pointer to an array of at least \p namelen bytes,
* the filter name will be copied into that array. The name will be
* null terminated if \p namelen is large enough. The filter name
* returned will be the name appearing in the file, the name
* registered for the filter, or an empty string.
*
* \p filter_config is the bit field described in
* H5Zget_filter_info().
*
* \version 1.8.5 Function extended to work with group creation property
* lists.
* \since 1.8.0
*
*/
H5_DLL H5Z_filter_t H5Pget_filter2(hid_t plist_id, unsigned idx,
unsigned int *flags/*out*/,
size_t *cd_nelmts/*out*/,
unsigned cd_values[]/*out*/,
size_t namelen, char name[],
unsigned *filter_config /*out*/);
H5_DLL herr_t H5Pset_attr_phase_change(hid_t plist_id, unsigned max_compact, unsigned min_dense);
H5_DLL herr_t H5Pget_attr_phase_change(hid_t plist_id, unsigned *max_compact, unsigned *min_dense);
H5_DLL herr_t H5Pset_attr_creation_order(hid_t plist_id, unsigned crt_order_flags);
H5_DLL herr_t H5Pget_attr_creation_order(hid_t plist_id, unsigned *crt_order_flags);
H5_DLL herr_t H5Pset_obj_track_times(hid_t plist_id, hbool_t track_times);
H5_DLL herr_t H5Pget_obj_track_times(hid_t plist_id, hbool_t *track_times);
H5_DLL herr_t H5Pmodify_filter(hid_t plist_id, H5Z_filter_t filter, unsigned int flags, size_t cd_nelmts,
const unsigned int cd_values[/*cd_nelmts*/]);
H5_DLL herr_t H5Pset_filter(hid_t plist_id, H5Z_filter_t filter, unsigned int flags, size_t cd_nelmts,
const unsigned int c_values[]);
H5_DLL int H5Pget_nfilters(hid_t plist_id);
H5_DLL herr_t H5Pget_filter_by_id2(hid_t plist_id, H5Z_filter_t id, unsigned int *flags /*out*/,
size_t *cd_nelmts /*out*/, unsigned cd_values[] /*out*/, size_t namelen,
char name[] /*out*/, unsigned *filter_config /*out*/);
H5_DLL htri_t H5Pall_filters_avail(hid_t plist_id);
H5_DLL herr_t H5Premove_filter(hid_t plist_id, H5Z_filter_t filter);
H5_DLL herr_t H5Pset_deflate(hid_t plist_id, unsigned aggression);
H5_DLL herr_t H5Pset_fletcher32(hid_t plist_id);
/* File creation property list (FCPL) routines */
H5_DLL herr_t H5Pset_userblock(hid_t plist_id, hsize_t size);
H5_DLL herr_t H5Pget_userblock(hid_t plist_id, hsize_t *size);
H5_DLL herr_t H5Pset_sizes(hid_t plist_id, size_t sizeof_addr, size_t sizeof_size);
H5_DLL herr_t H5Pget_sizes(hid_t plist_id, size_t *sizeof_addr /*out*/, size_t *sizeof_size /*out*/);
H5_DLL herr_t H5Pset_sym_k(hid_t plist_id, unsigned ik, unsigned lk);
H5_DLL herr_t H5Pget_sym_k(hid_t plist_id, unsigned *ik /*out*/, unsigned *lk /*out*/);
H5_DLL herr_t H5Pset_istore_k(hid_t plist_id, unsigned ik);
H5_DLL herr_t H5Pget_istore_k(hid_t plist_id, unsigned *ik /*out*/);
H5_DLL herr_t H5Pset_shared_mesg_nindexes(hid_t plist_id, unsigned nindexes);
H5_DLL herr_t H5Pget_shared_mesg_nindexes(hid_t plist_id, unsigned *nindexes);
H5_DLL herr_t H5Pset_shared_mesg_index(hid_t plist_id, unsigned index_num, unsigned mesg_type_flags,
unsigned min_mesg_size);
H5_DLL herr_t H5Pget_shared_mesg_index(hid_t plist_id, unsigned index_num, unsigned *mesg_type_flags,
unsigned *min_mesg_size);
H5_DLL herr_t H5Pset_shared_mesg_phase_change(hid_t plist_id, unsigned max_list, unsigned min_btree);
H5_DLL herr_t H5Pget_shared_mesg_phase_change(hid_t plist_id, unsigned *max_list, unsigned *min_btree);
H5_DLL herr_t H5Pset_file_space_strategy(hid_t plist_id, H5F_fspace_strategy_t strategy, hbool_t persist,
hsize_t threshold);
H5_DLL herr_t H5Pget_file_space_strategy(hid_t plist_id, H5F_fspace_strategy_t *strategy, hbool_t *persist,
hsize_t *threshold);
H5_DLL herr_t H5Pset_file_space_page_size(hid_t plist_id, hsize_t fsp_size);
H5_DLL herr_t H5Pget_file_space_page_size(hid_t plist_id, hsize_t *fsp_size);
/* File access property list (FAPL) routines */
H5_DLL herr_t H5Pset_alignment(hid_t fapl_id, hsize_t threshold, hsize_t alignment);
H5_DLL herr_t H5Pget_alignment(hid_t fapl_id, hsize_t *threshold /*out*/, hsize_t *alignment /*out*/);
H5_DLL herr_t H5Pset_driver(hid_t plist_id, hid_t driver_id, const void *driver_info);
H5_DLL hid_t H5Pget_driver(hid_t plist_id);
H5_DLL const void *H5Pget_driver_info(hid_t plist_id);
H5_DLL herr_t H5Pset_vol(hid_t plist_id, hid_t new_vol_id, const void *new_vol_info);
H5_DLL herr_t H5Pget_vol_id(hid_t plist_id, hid_t *vol_id);
H5_DLL herr_t H5Pget_vol_info(hid_t plist_id, void **vol_info);
H5_DLL herr_t H5Pset_family_offset(hid_t fapl_id, hsize_t offset);
H5_DLL herr_t H5Pget_family_offset(hid_t fapl_id, hsize_t *offset);
H5_DLL herr_t H5Pset_multi_type(hid_t fapl_id, H5FD_mem_t type);
H5_DLL herr_t H5Pget_multi_type(hid_t fapl_id, H5FD_mem_t *type);
H5_DLL herr_t H5Pset_cache(hid_t plist_id, int mdc_nelmts, size_t rdcc_nslots, size_t rdcc_nbytes,
double rdcc_w0);
H5_DLL herr_t H5Pget_cache(hid_t plist_id, int *mdc_nelmts, /* out */
size_t *rdcc_nslots /*out*/, size_t *rdcc_nbytes /*out*/, double *rdcc_w0);
H5_DLL herr_t H5Pset_mdc_config(hid_t plist_id, H5AC_cache_config_t *config_ptr);
H5_DLL herr_t H5Pget_mdc_config(hid_t plist_id, H5AC_cache_config_t *config_ptr); /* out */
H5_DLL herr_t H5Pset_gc_references(hid_t fapl_id, unsigned gc_ref);
H5_DLL herr_t H5Pget_gc_references(hid_t fapl_id, unsigned *gc_ref /*out*/);
H5_DLL herr_t H5Pset_fclose_degree(hid_t fapl_id, H5F_close_degree_t degree);
H5_DLL herr_t H5Pget_fclose_degree(hid_t fapl_id, H5F_close_degree_t *degree);
H5_DLL herr_t H5Pset_meta_block_size(hid_t fapl_id, hsize_t size);
H5_DLL herr_t H5Pget_meta_block_size(hid_t fapl_id, hsize_t *size /*out*/);
H5_DLL herr_t H5Pset_sieve_buf_size(hid_t fapl_id, size_t size);
H5_DLL herr_t H5Pget_sieve_buf_size(hid_t fapl_id, size_t *size /*out*/);
H5_DLL herr_t H5Pset_small_data_block_size(hid_t fapl_id, hsize_t size);
H5_DLL herr_t H5Pget_small_data_block_size(hid_t fapl_id, hsize_t *size /*out*/);
H5_DLL herr_t H5Pset_libver_bounds(hid_t plist_id, H5F_libver_t low, H5F_libver_t high);
H5_DLL herr_t H5Pget_libver_bounds(hid_t plist_id, H5F_libver_t *low, H5F_libver_t *high);
H5_DLL herr_t H5Pset_elink_file_cache_size(hid_t plist_id, unsigned efc_size);
H5_DLL herr_t H5Pget_elink_file_cache_size(hid_t plist_id, unsigned *efc_size);
H5_DLL herr_t H5Pset_file_image(hid_t fapl_id, void *buf_ptr, size_t buf_len);
H5_DLL herr_t H5Pget_file_image(hid_t fapl_id, void **buf_ptr_ptr, size_t *buf_len_ptr);
H5_DLL herr_t H5Pset_file_image_callbacks(hid_t fapl_id, H5FD_file_image_callbacks_t *callbacks_ptr);
H5_DLL herr_t H5Pget_file_image_callbacks(hid_t fapl_id, H5FD_file_image_callbacks_t *callbacks_ptr);
H5_DLL herr_t H5Pset_core_write_tracking(hid_t fapl_id, hbool_t is_enabled, size_t page_size);
H5_DLL herr_t H5Pget_core_write_tracking(hid_t fapl_id, hbool_t *is_enabled, size_t *page_size);
H5_DLL herr_t H5Pset_metadata_read_attempts(hid_t plist_id, unsigned attempts);
H5_DLL herr_t H5Pget_metadata_read_attempts(hid_t plist_id, unsigned *attempts);
H5_DLL herr_t H5Pset_object_flush_cb(hid_t plist_id, H5F_flush_cb_t func, void *udata);
H5_DLL herr_t H5Pget_object_flush_cb(hid_t plist_id, H5F_flush_cb_t *func, void **udata);
H5_DLL herr_t H5Pset_mdc_log_options(hid_t plist_id, hbool_t is_enabled, const char *location,
hbool_t start_on_access);
H5_DLL herr_t H5Pget_mdc_log_options(hid_t plist_id, hbool_t *is_enabled, char *location,
size_t *location_size, hbool_t *start_on_access);
H5_DLL herr_t H5Pset_evict_on_close(hid_t fapl_id, hbool_t evict_on_close);
H5_DLL herr_t H5Pget_evict_on_close(hid_t fapl_id, hbool_t *evict_on_close);
H5_DLL herr_t H5Pset_file_locking(hid_t fapl_id, hbool_t use_file_locking, hbool_t ignore_when_disabled);
H5_DLL herr_t H5Pget_file_locking(hid_t fapl_id, hbool_t *use_file_locking, hbool_t *ignore_when_disabled);
#ifdef H5_HAVE_PARALLEL
H5_DLL herr_t H5Pset_all_coll_metadata_ops(hid_t plist_id, hbool_t is_collective);
H5_DLL herr_t H5Pget_all_coll_metadata_ops(hid_t plist_id, hbool_t *is_collective);
H5_DLL herr_t H5Pset_coll_metadata_write(hid_t plist_id, hbool_t is_collective);
H5_DLL herr_t H5Pget_coll_metadata_write(hid_t plist_id, hbool_t *is_collective);
H5_DLL herr_t H5Pget_mpi_params(hid_t fapl_id, MPI_Comm *comm, MPI_Info *info);
H5_DLL herr_t H5Pset_mpi_params(hid_t fapl_id, MPI_Comm comm, MPI_Info info);
#endif /* H5_HAVE_PARALLEL */
H5_DLL herr_t H5Pset_mdc_image_config(hid_t plist_id, H5AC_cache_image_config_t *config_ptr);
H5_DLL herr_t H5Pget_mdc_image_config(hid_t plist_id, H5AC_cache_image_config_t *config_ptr /*out*/);
H5_DLL herr_t H5Pset_page_buffer_size(hid_t plist_id, size_t buf_size, unsigned min_meta_per,
unsigned min_raw_per);
H5_DLL herr_t H5Pget_page_buffer_size(hid_t plist_id, size_t *buf_size, unsigned *min_meta_per,
unsigned *min_raw_per);
/* Dataset creation property list (DCPL) routines */
/**
* \ingroup DCPL
*
* \brief Retrieves the size of chunks for the raw data of a chunked
* layout dataset
*
* \dcpl_id{plist_id}
* \param[in] max_ndims Size of the \p dims array
* \param[out] dim Array to store the chunk dimensions
*
* \return Returns chunk dimensionality if successful;
* otherwise returns a negative value.
*
* \details H5Pget_chunk() retrieves the size of chunks for the raw data
* of a chunked layout dataset. This function is only valid for
* dataset creation property lists. At most, \p max_ndims elements
* of \p dim will be initialized.
*
* \since 1.0.0
*
*/
H5_DLL int H5Pget_chunk(hid_t plist_id, int max_ndims, hsize_t dim[]/*out*/);
/**
*-------------------------------------------------------------------------
*
* \ingroup DCPL
*
* \brief Retrieves the edge chunk option setting from a dataset creation
* property list
*
* \dcpl_id{plist_id}
* \param[out] opts Edge chunk option flag. Valid values are described in
* H5Pset_chunk_opts(). The option status can be
* retrieved using the bitwise AND operator ( & ). For
* example, the expression
* (opts&#H5D_CHUNK_DONT_FILTER_PARTIAL_CHUNKS) will
* evaluate to #H5D_CHUNK_DONT_FILTER_PARTIAL_CHUNKS if
* that option has been enabled. Otherwise, it will
* evaluate to 0 (zero).
*
* \return \herr_t
*
* \details H5Pget_chunk_opts() retrieves the edge chunk option setting
* stored in the dataset creation property list \p plist_id.
*
* \since 1.10.0
*
*/
H5_DLL herr_t H5Pget_chunk_opts(hid_t plist_id, unsigned *opts);
/**
*-------------------------------------------------------------------------
*
* \ingroup DCPL
*
* \brief Retrieves the time when fill values are written to a dataset
*
* \dcpl_id{plist_id}
* \param[out] fill_time Setting for the timing of writing fill values to
* the dataset
*
* \return \herr_t
*
* \details H5Pget_fill_time() examines the dataset creation property list
* \p plist_id to determine when fill values are to be written to
* a dataset. Valid values returned in \p fill_time are as
* follows:
*
* <table>
* <tr>
* <td>#H5D_FILL_TIME_IFSET</td>
* <td>Fill values are written to the dataset when storage
* space is allocated only if there is a user-defined fill
* value, i.e., one set with H5Pset_fill_value(). (Default)
* </td>
* </tr>
* <tr>
* <td>#H5D_FILL_TIME_ALLOC</td>
* <td>Fill values are written to the dataset when storage
* space is allocated.</td>
* </tr>
* <tr>
* <td>#H5D_FILL_TIME_NEVER</td>
* <td>Fill values are never written to the dataset.</td>
* </tr>
* </table>
*
* \note H5Pget_fill_time() is designed to work in coordination with the
* dataset fill value and dataset storage allocation time properties,
* retrieved with the functions H5Pget_fill_value() and
* H5Pget_alloc_time().
*
* \since 1.6.0
*
*/
H5_DLL herr_t H5Pget_fill_time(hid_t plist_id, H5D_fill_time_t
*fill_time/*out*/);
/**
*-------------------------------------------------------------------------
*
* \ingroup DCPL
*
* \brief Retrieves a dataset fill value
*
* \dcpl_id{plist_id}
* \param[in] type_id Datatype identifier for the value passed via
* \p value
* \param[out] value Pointer to buffer to contain the returned
* fill value
*
* \return \herr_t
*
* \details H5Pget_fill_value() returns the dataset fill value defined in
* the dataset creation property list \p plist_id. The fill value
* is returned through the \p value pointer and will be converted
* to the datatype specified by \p type_id. This datatype may
* differ from the fill value datatype in the property list, but
* the HDF5 library must be able to convert between the two
* datatypes.
*
* If the fill value is undefined, i.e., set to NULL in the
* property list, H5Pget_fill_value() will return an error.
* H5Pfill_value_defined() should be used to check for this
* condition before H5Pget_fill_value() is called.
*
* Memory must be allocated by the calling application.
*
* \note H5Pget_fill_value() is designed to coordinate with the dataset
* storage allocation time and fill value write time properties,
* which can be retrieved with the functions H5Pget_alloc_time()
* and H5Pget_fill_time(), respectively.
*
* \since 1.0.0
*
*/
H5_DLL herr_t H5Pget_fill_value(hid_t plist_id, hid_t type_id,
void *value/*out*/);
/**
*-------------------------------------------------------------------------
* \ingroup DCPL
*
* \brief Returns the layout of the raw data for a dataset
*
* \dcpl_id{plist_id}
*
* \return Returns the layout type (a non-negative value) of a dataset
* creation property list if successful. Valid return values are:
* - #H5D_COMPACT: Raw data is stored in the object header in the
* file.
* - #H5D_CONTIGUOUS: Raw data is stored separately from the object
* header in one contiguous chunk in the file.
* - #H5D_CHUNKED: Raw data is stored separately from the object
* header in chunks in separate locations in the
* file.
* - #H5D_VIRTUAL: Raw data is drawn from multiple datasets in
* different files.
* \return
* Otherwise, returns a negative value indicating failure.
*
* \details H5Pget_layout() returns the layout of the raw data for a
* dataset. This function is only valid for dataset creation
* property lists.
*
* Note that a compact storage layout may affect writing data to
* the dataset with parallel applications. See the H5Dwrite()
* documentation for details.
*
* \version 1.10.0 #H5D_VIRTUAL added in this release.
*
* \since 1.0.0
*
*/
H5_DLL H5D_layout_t H5Pget_layout(hid_t plist_id);
/**
*-------------------------------------------------------------------------
* \ingroup DCPL
*
* \brief Sets the size of the chunks used to store a chunked layout
* dataset
*
* \dcpl_id{plist_id}
* \param[in] ndims The number of dimensions of each chunk
* \param[in] dim An array defining the size, in dataset elements, of
* each chunk
*
* \return \herr_t
* \details H5Pset_chunk() sets the size of the chunks used to store a
* chunked layout dataset. This function is only valid for dataset
* creation property lists.
*
* The \p ndims parameter currently must be the same size as the
* rank of the dataset.
*
* The values of the \p dim array define the size of the chunks
* to store the dataset's raw data. The unit of measure for \p dim
* values is dataset elements.
*
* As a side-effect of this function, the layout of the dataset is
* changed to #H5D_CHUNKED, if it is not already so set.
*
* \note Chunk size cannot exceed the size of a fixed-size dataset. For
* example, a dataset consisting of a 5x4 fixed-size array cannot be
* defined with 10x10 chunks. Chunk maximums:
* - The maximum number of elements in a chunk is 2<sup>32</sup>-1 which
* is equal to 4,294,967,295. If the number of elements in a chunk is
* set via H5Pset_chunk() to a value greater than 2<sup>32</sup>-1,
* then H5Pset_chunk() will fail.
* - The maximum size for any chunk is 4GB. If a chunk that is larger
* than 4GB attempts to be written with H5Dwrite(), then H5Dwrite()
* will fail.
*
* \see H5Pset_layout(), H5Dwrite()
*
* \since 1.0.0
*
*/
H5_DLL herr_t H5Pset_chunk(hid_t plist_id, int ndims, const hsize_t dim[/*ndims*/]);
/**
*-------------------------------------------------------------------------
*
* \ingroup DCPL
*
* \brief Sets the edge chunk option in a dataset creation property list
*
* \dcpl_id{plist_id}
* \param[in] opts Edge chunk option flag. Valid values are:
* \li #H5D_CHUNK_DONT_FILTER_PARTIAL_CHUNKS
* When enabled, filters are not applied to partial
* edge chunks. When disabled, partial edge chunks are
* filtered. Enabling this option will improve
* performance when appending to the dataset and, when
* compression filters are used, prevent reallocation
* of these chunks. Datasets created with this option
* enabled will be inaccessible with HDF5 library
* versions before Release 1.10. Default: \e Disabled
* \li 0 (zero) Disables option; partial edge chunks
* will be compressed.
*
* \return \herr_t
*
* \details H5Pset_chunk_opts() sets the edge chunk option in the
* dataset creation property list \p dcpl_id.
*
* The available option is detailed in the parameters section.
* Only chunks that are not completely filled by the dataset’s
* dataspace are affected by this option. Such chunks are
* referred to as partial edge chunks.
*
* \note \b Motivation: H5Pset_chunk_opts() is used to specify storage
* options for chunks on the edge of a dataset’s dataspace. This
* capability allows the user to tune performance in cases where
* the dataset size may not be a multiple of the chunk size and
* the handling of partial edge chunks can impact performance.
*
* \since 1.10.0
*
*/
H5_DLL herr_t H5Pset_chunk_opts(hid_t plist_id, unsigned opts);
/**
*-------------------------------------------------------------------------
*
* \ingroup DCPL
*
* \brief Sets the time when fill values are written to a dataset
*
* \dcpl_id{plist_id}
* \param[in] fill_time When to write fill values to a dataset
*
* \return \herr_t
*
* \details H5Pset_fill_time() sets up the timing for writing fill values
* to a dataset. This property is set in the dataset creation
* property list \p plist_id. Timing is specified in \p fill_time
* with one of the following values:
*
* <table>
* <tr>
* <td>#H5D_FILL_TIME_IFSET</td>
* <td>Write fill values to the dataset when storage space is
* allocated only if there is a user-defined fill value,
* i.e.,one set with H5Pset_fill_value(). (Default)</td>
* </tr>
* <tr>
* <td>#H5D_FILL_TIME_ALLOC</td>
* <td>Write fill values to the dataset when storage space is
* allocated.</td>
* </tr>
* <tr>
* <td>#H5D_FILL_TIME_NEVER</td>
* <td>Never write fill values to the dataset.</td>
* </tr>
* </table>
*
* \note H5Pset_fill_time() is designed for coordination with the dataset
* fill value and dataset storage allocation time properties, set
* with the functions H5Pset_fill_value() and H5Pset_alloc_time().
* See H5Dcreate() for further cross-references.
*
* \since 1.6.0
*
*/
H5_DLL herr_t H5Pset_fill_time(hid_t plist_id, H5D_fill_time_t fill_time);
/**
*-------------------------------------------------------------------------
*
* \ingroup DCPL
*
* \brief Sets the fill value for a dataset
*
* \dcpl_id{plist_id}
* \param[in] type_id Datatype of \p value
* \param[in] value Pointer to buffer containing value to use as
* fill value
*
* \return \herr_t
*
* \details H5Pset_fill_value() sets the fill value for a dataset in the
* dataset creation property list. \p value is interpreted as
* being of datatype \p type_id. This datatype may differ from
* that of the dataset, but the HDF5 library must be able to
* convert \p value to the dataset datatype when the dataset is
* created.
*
* The default fill value is 0 (zero), which is interpreted
* according to the actual dataset datatype.
*
* Setting \p value to NULL indicates that the fill value is to
* be undefined.
*
* \note Applications sometimes write data only to portions of an allocated
* dataset. It is often useful in such cases to fill the unused space
* with a known fill value. This function allows the user application
* to set that fill value; the functions H5Dfill() and
* H5Pset_fill_time(), respectively, provide the ability to apply the
* fill value on demand or to set up its automatic application.
*
* \note A fill value should be defined so that it is appropriate for the
* application. While the HDF5 default fill value is 0 (zero), it is
* often appropriate to use another value. It might be useful, for
* example, to use a value that is known to be impossible for the
* application to legitimately generate.
*
* \note H5Pset_fill_value() is designed to work in concert with
* H5Pset_alloc_time() and H5Pset_fill_time(). H5Pset_alloc_time()
* and H5Pset_fill_time() govern the timing of dataset storage
* allocation and fill value write operations and can be important in
* tuning application performance.
*
* \note See H5Dcreate() for further cross-references.
*
* \since 1.0.0
*
*/
H5_DLL herr_t H5Pset_fill_value(hid_t plist_id, hid_t type_id,
const void *value);
/**
*-------------------------------------------------------------------------
*
* \ingroup DCPL
*
* \brief Sets up use of the shuffle filter
*
* \dcpl_id{plist_id}
*
* \return \herr_t
*
* \details H5Pset_shuffle() sets the shuffle filter, #H5Z_FILTER_SHUFFLE,
* in the dataset creation property list \p plist_id. The shuffle
* filter de-interlaces a block of data by reordering the bytes.
* All the bytes from one consistent byte position of each data
* element are placed together in one block; all bytes from a
* second consistent byte position of each data element are placed
* together a second block; etc. For example, given three data
* elements of a 4-byte datatype stored as 012301230123, shuffling
* will re-order data as 000111222333. This can be a valuable step
* in an effective compression algorithm because the bytes in each
* byte position are often closely related to each other and
* putting them together can increase the compression ratio.
*
* As implied above, the primary value of the shuffle filter lies
* in its coordinated use with a compression filter; it does not
* provide data compression when used alone. When the shuffle
* filter is applied to a dataset immediately prior to the use of
* a compression filter, the compression ratio achieved is often
* superior to that achieved by the use of a compression filter
* without the shuffle filter.
*
* \since 1.6.0
*
*/
H5_DLL herr_t H5Pset_shuffle(hid_t plist_id);
/**
*-------------------------------------------------------------------------
* \ingroup DCPL
*
* \brief Sets the type of storage used to store the raw data for a dataset
*
* \dcpl_id{plist_id}
* \param[in] layout Type of storage layout for raw data
*
* \return \herr_t
* \details H5Pset_layout() sets the type of storage used to store the raw
* data for a dataset. This function is only valid for dataset
* creation property lists.
*
* Valid values for \p layout are:
* - #H5D_COMPACT: Store raw data in the dataset object header
* in file. This should only be used for datasets
* with small amounts of raw data. The raw data
* size limit is 64K (65520 bytes). Attempting
* to create a dataset with raw data larger than
* this limit will cause the H5Dcreate() call to
* fail.
* - #H5D_CONTIGUOUS: Store raw data separately from the object
* header in one large chunk in the file.
* - #H5D_CHUNKED: Store raw data separately from the object header
* as chunks of data in separate locations in
* the file.
* - #H5D_VIRTUAL: Draw raw data from multiple datasets in
* different files.
*
* Note that a compact storage layout may affect writing data to
* the dataset with parallel applications. See the note in
* H5Dwrite() documentation for details.
* \version 1.10.0 #H5D_VIRTUAL added in this release.
* \since 1.0.0
*
*/
H5_DLL herr_t H5Pset_layout(hid_t plist_id, H5D_layout_t layout);
/**
*-------------------------------------------------------------------------
* \ingroup DCPL
*
* \brief Sets up use of the SZIP compression filter
*
* \dcpl_id{plist_id}
* \param[in] options_mask A bit-mask conveying the desired SZIP options;
* Valid values are #H5_SZIP_EC_OPTION_MASK and
* #H5_SZIP_NN_OPTION_MASK.
* \param[in] pixels_per_block The number of pixels or data elements in each
* data block
*
* \return \herr_t
*
* \details H5Pset_szip() sets an SZIP compression filter, #H5Z_FILTER_SZIP,
* for a dataset. SZIP is a compression method designed for use with
* scientific data.
*
* Before proceeding, all users should review the “Limitations”
* section below.
*
* Users familiar with SZIP outside the HDF5 context may benefit
* from reviewing the Note “For Users Familiar with SZIP in Other
* Contexts” below.
*
* In the text below, the term pixel refers to an HDF5 data element.
* This terminology derives from SZIP compression's use with image
* data, where pixel referred to an image pixel.
*
* The SZIP \p bits_per_pixel value (see Note, below) is automatically
* set, based on the HDF5 datatype. SZIP can be used with atomic
* datatypes that may have size of 8, 16, 32, or 64 bits.
* Specifically, a dataset with a datatype that is 8-, 16-, 32-, or
* 64-bit signed or unsigned integer; char; or 32- or 64-bit float
* can be compressed with SZIP. See Note, below, for further
* discussion of the the SZIP \p bits_per_pixel setting.
*
* SZIP options are passed in an options mask, \p options_mask,
* as follows.
*
* <table>
* <tr>
* <th>Option</th>
* <th>Description (Mutually exclusive; select one.)</th>
* </tr>
* <tr>
* <td>#H5_SZIP_EC_OPTION_MASK</td>
* <td>Selects entropy coding method</td>
* </tr>
* <tr>
* <td>#H5_SZIP_NN_OPTION_MASK</td>
* <td>Selects nearest neighbor coding method</td>
* </tr>
* </table>
*
* The following guidelines can be used in determining which
* option to select:
*
* - The entropy coding method, the EC option specified by
* #H5_SZIP_EC_OPTION_MASK, is best suited for data that has been
* processed. The EC method works best for small numbers.
* - The nearest neighbor coding method, the NN option specified
* by #H5_SZIP_NN_OPTION_MASK, preprocesses the data then the
* applies EC method as above.
*
* Other factors may affect results, but the above criteria
* provides a good starting point for optimizing data compression.
*
* SZIP compresses data block by block, with a user-tunable block
* size. This block size is passed in the parameter
* \p pixels_per_block and must be even and not greater than 32,
* with typical values being 8, 10, 16, or 32. This parameter
* affects compression ratio; the more pixel values vary, the
* smaller this number should be to achieve better performance.
*
* In HDF5, compression can be applied only to chunked datasets.
* If \p pixels_per_block is bigger than the total number of
* elements in a dataset chunk, H5Pset_szip() will succeed but
* the subsequent call to H5Dcreate() will fail; the conflict
* can be detected only when the property list is used.
*
* To achieve optimal performance for SZIP compression, it is
* recommended that a chunk's fastest-changing dimension be equal
* to N times \p pixels_per_block where N is the maximum number of
* blocks per scan line allowed by the SZIP library. In the
* current version of SZIP, N is set to 128.
*
* SZIP compression is an optional HDF5 filter.
*
* \b Limitations:
*
* - SZIP compression cannot be applied to compound, array,
* variable-length, enumeration, or any other user-defined
* datatypes. If an SZIP filter is set in a dataset creation
* property list used to create a dataset containing a
* non-allowed datatype, the call to H5Dcreate() will fail; the
* conflict can be detected only when the property list is used.
* - Users should be aware that there are factors that affect one’s
* rights and ability to use SZIP compression by reviewing the
* SZIP copyright notice.
*
* \note \b For \b Users \b Familiar \b with \b SZIP \b in \b Other \b Contexts:
*
* \note The following notes are of interest primarily to those who have
* used SZIP compression outside of the HDF5 context.
* In non-HDF5 applications, SZIP typically requires that the user
* application supply additional parameters:
* - \p pixels_in_object, the number of pixels in the object to
* be compressed
* - \p bits_per_pixel, the number of bits per pixel
* - \p pixels_per_scanline, the number of pixels per scan line
*
* \note These values need not be independently supplied in the HDF5
* environment as they are derived from the datatype and dataspace,
* which are already known. In particular, HDF5 sets
* \p pixels_in_object to the number of elements in a chunk and
* \p bits_per_pixel to the size of the element or pixel datatype.
*
* \note The following algorithm is used to set \p pixels_per_scanline:
* - If the size of a chunk's fastest-changing dimension, size,
* is greater than 4K, set \p pixels_per_scanline to 128 times
* \p pixels_per_block.
* - If size is less than 4K but greater than \p pixels_per_block,
* set \p pixels_per_scanline to the minimum of size and 128
* times \p pixels_per_block.
* - If size is less than \p pixels_per_block but greater than the
* number elements in the chunk, set \p pixels_per_scanline to
* the minimum of the number elements in the chunk and 128 times
* \p pixels_per_block.
*
* \note The HDF5 datatype may have precision that is less than the full
* size of the data element, e.g., an 11-bit integer can be defined
* using H5Tset_precision(). To a certain extent, SZIP can take
* advantage of the precision of the datatype to improve compression:
* - If the HDF5 datatype size is 24-bit or less and the offset of
* the bits in the HDF5 datatype is zero (see H5Tset_offset() or
* H5Tget_offset()), the data is the in lowest N bits of the data
* element. In this case, the SZIP \p bits_per_pixel is set to the
* precision of the HDF5 datatype.
* - If the offset is not zero, the SZIP \p bits_per_pixel will be
* set to the number of bits in the full size of the data element.
* - If the HDF5 datatype precision is 25-bit to 32-bit, the SZIP
* \p bits_per_pixel will be set to 32.
* - If the HDF5 datatype precision is 33-bit to 64-bit, the SZIP
* \p bits_per_pixel will be set to 64.
*
* \note HDF5 always modifies the options mask provided by the user to set up
* usage of RAW_OPTION_MASK, ALLOW_K13_OPTION_MASK, and one of
* LSB_OPTION_MASK or MSB_OPTION_MASK, depending on endianness of the
* datatype.
*
* \since 1.6.0
*
*--------------------------------------------------------------------------
*/
H5_DLL herr_t H5Pset_szip(hid_t plist_id, unsigned options_mask, unsigned pixels_per_block);
H5_DLL herr_t H5Pset_virtual(hid_t dcpl_id, hid_t vspace_id, const char *src_file_name,
const char *src_dset_name, hid_t src_space_id);
H5_DLL herr_t H5Pget_virtual_count(hid_t dcpl_id, size_t *count /*out*/);
H5_DLL hid_t H5Pget_virtual_vspace(hid_t dcpl_id, size_t index);
H5_DLL hid_t H5Pget_virtual_srcspace(hid_t dcpl_id, size_t index);
H5_DLL ssize_t H5Pget_virtual_filename(hid_t dcpl_id, size_t index, char *name /*out*/, size_t size);
H5_DLL ssize_t H5Pget_virtual_dsetname(hid_t dcpl_id, size_t index, char *name /*out*/, size_t size);
H5_DLL herr_t H5Pset_external(hid_t plist_id, const char *name, off_t offset, hsize_t size);
H5_DLL int H5Pget_external_count(hid_t plist_id);
H5_DLL herr_t H5Pget_external(hid_t plist_id, unsigned idx, size_t name_size, char *name /*out*/,
off_t *offset /*out*/, hsize_t *size /*out*/);
H5_DLL herr_t H5Pset_nbit(hid_t plist_id);
H5_DLL herr_t H5Pset_scaleoffset(hid_t plist_id, H5Z_SO_scale_type_t scale_type, int scale_factor);
H5_DLL herr_t H5Pfill_value_defined(hid_t plist, H5D_fill_value_t *status);
H5_DLL herr_t H5Pset_alloc_time(hid_t plist_id, H5D_alloc_time_t alloc_time);
H5_DLL herr_t H5Pget_alloc_time(hid_t plist_id, H5D_alloc_time_t *alloc_time /*out*/);
H5_DLL herr_t H5Pget_dset_no_attrs_hint(hid_t dcpl_id, hbool_t *minimize);
H5_DLL herr_t H5Pset_dset_no_attrs_hint(hid_t dcpl_id, hbool_t minimize);
/* Dataset access property list (DAPL) routines */
H5_DLL herr_t H5Pset_chunk_cache(hid_t dapl_id, size_t rdcc_nslots, size_t rdcc_nbytes, double rdcc_w0);
H5_DLL herr_t H5Pget_chunk_cache(hid_t dapl_id, size_t *rdcc_nslots /*out*/, size_t *rdcc_nbytes /*out*/,
double *rdcc_w0 /*out*/);
H5_DLL herr_t H5Pset_virtual_view(hid_t plist_id, H5D_vds_view_t view);
H5_DLL herr_t H5Pget_virtual_view(hid_t plist_id, H5D_vds_view_t *view);
H5_DLL herr_t H5Pset_virtual_printf_gap(hid_t plist_id, hsize_t gap_size);
H5_DLL herr_t H5Pget_virtual_printf_gap(hid_t plist_id, hsize_t *gap_size);
H5_DLL herr_t H5Pset_virtual_prefix(hid_t dapl_id, const char *prefix);
H5_DLL ssize_t H5Pget_virtual_prefix(hid_t dapl_id, char *prefix /*out*/, size_t size);
H5_DLL herr_t H5Pset_append_flush(hid_t plist_id, unsigned ndims, const hsize_t boundary[],
H5D_append_cb_t func, void *udata);
H5_DLL herr_t H5Pget_append_flush(hid_t plist_id, unsigned dims, hsize_t boundary[], H5D_append_cb_t *func,
void **udata);
H5_DLL herr_t H5Pset_efile_prefix(hid_t dapl_id, const char *prefix);
H5_DLL ssize_t H5Pget_efile_prefix(hid_t dapl_id, char *prefix /*out*/, size_t size);
/* Dataset xfer property list (DXPL) routines */
H5_DLL herr_t H5Pset_data_transform(hid_t plist_id, const char *expression);
H5_DLL ssize_t H5Pget_data_transform(hid_t plist_id, char *expression /*out*/, size_t size);
H5_DLL herr_t H5Pset_buffer(hid_t plist_id, size_t size, void *tconv, void *bkg);
H5_DLL size_t H5Pget_buffer(hid_t plist_id, void **tconv /*out*/, void **bkg /*out*/);
H5_DLL herr_t H5Pset_preserve(hid_t plist_id, hbool_t status);
H5_DLL int H5Pget_preserve(hid_t plist_id);
H5_DLL herr_t H5Pset_edc_check(hid_t plist_id, H5Z_EDC_t check);
H5_DLL H5Z_EDC_t H5Pget_edc_check(hid_t plist_id);
H5_DLL herr_t H5Pset_filter_callback(hid_t plist_id, H5Z_filter_func_t func, void *op_data);
H5_DLL herr_t H5Pset_btree_ratios(hid_t plist_id, double left, double middle, double right);
H5_DLL herr_t H5Pget_btree_ratios(hid_t plist_id, double *left /*out*/, double *middle /*out*/,
double *right /*out*/);
H5_DLL herr_t H5Pset_vlen_mem_manager(hid_t plist_id, H5MM_allocate_t alloc_func, void *alloc_info,
H5MM_free_t free_func, void *free_info);
H5_DLL herr_t H5Pget_vlen_mem_manager(hid_t plist_id, H5MM_allocate_t *alloc_func, void **alloc_info,
H5MM_free_t *free_func, void **free_info);
H5_DLL herr_t H5Pset_hyper_vector_size(hid_t fapl_id, size_t size);
H5_DLL herr_t H5Pget_hyper_vector_size(hid_t fapl_id, size_t *size /*out*/);
H5_DLL herr_t H5Pset_type_conv_cb(hid_t dxpl_id, H5T_conv_except_func_t op, void *operate_data);
H5_DLL herr_t H5Pget_type_conv_cb(hid_t dxpl_id, H5T_conv_except_func_t *op, void **operate_data);
#ifdef H5_HAVE_PARALLEL
H5_DLL herr_t H5Pget_mpio_actual_chunk_opt_mode(hid_t plist_id,
H5D_mpio_actual_chunk_opt_mode_t *actual_chunk_opt_mode);
H5_DLL herr_t H5Pget_mpio_actual_io_mode(hid_t plist_id, H5D_mpio_actual_io_mode_t *actual_io_mode);
H5_DLL herr_t H5Pget_mpio_no_collective_cause(hid_t plist_id, uint32_t *local_no_collective_cause,
uint32_t *global_no_collective_cause);
#endif /* H5_HAVE_PARALLEL */
/* Link creation property list (LCPL) routines */
H5_DLL herr_t H5Pset_create_intermediate_group(hid_t plist_id, unsigned crt_intmd);
H5_DLL herr_t H5Pget_create_intermediate_group(hid_t plist_id, unsigned *crt_intmd /*out*/);
/* Group creation property list (GCPL) routines */
H5_DLL herr_t H5Pset_local_heap_size_hint(hid_t plist_id, size_t size_hint);
H5_DLL herr_t H5Pget_local_heap_size_hint(hid_t plist_id, size_t *size_hint /*out*/);
H5_DLL herr_t H5Pset_link_phase_change(hid_t plist_id, unsigned max_compact, unsigned min_dense);
H5_DLL herr_t H5Pget_link_phase_change(hid_t plist_id, unsigned *max_compact /*out*/,
unsigned *min_dense /*out*/);
H5_DLL herr_t H5Pset_est_link_info(hid_t plist_id, unsigned est_num_entries, unsigned est_name_len);
H5_DLL herr_t H5Pget_est_link_info(hid_t plist_id, unsigned *est_num_entries /* out */,
unsigned *est_name_len /* out */);
H5_DLL herr_t H5Pset_link_creation_order(hid_t plist_id, unsigned crt_order_flags);
H5_DLL herr_t H5Pget_link_creation_order(hid_t plist_id, unsigned *crt_order_flags /* out */);
/* Map access property list (MAPL) routines */
#ifdef H5_HAVE_MAP_API
H5_DLL herr_t H5Pset_map_iterate_hints(hid_t mapl_id, size_t key_prefetch_size, size_t key_alloc_size);
H5_DLL herr_t H5Pget_map_iterate_hints(hid_t mapl_id, size_t *key_prefetch_size /*out*/,
size_t *key_alloc_size /*out*/);
#endif /* H5_HAVE_MAP_API */
/* String creation property list (STRCPL) routines */
H5_DLL herr_t H5Pset_char_encoding(hid_t plist_id, H5T_cset_t encoding);
H5_DLL herr_t H5Pget_char_encoding(hid_t plist_id, H5T_cset_t *encoding /*out*/);
/* Link access property list (LAPL) routines */
H5_DLL herr_t H5Pset_nlinks(hid_t plist_id, size_t nlinks);
H5_DLL herr_t H5Pget_nlinks(hid_t plist_id, size_t *nlinks);
H5_DLL herr_t H5Pset_elink_prefix(hid_t plist_id, const char *prefix);
H5_DLL ssize_t H5Pget_elink_prefix(hid_t plist_id, char *prefix, size_t size);
H5_DLL hid_t H5Pget_elink_fapl(hid_t lapl_id);
H5_DLL herr_t H5Pset_elink_fapl(hid_t lapl_id, hid_t fapl_id);
H5_DLL herr_t H5Pset_elink_acc_flags(hid_t lapl_id, unsigned flags);
H5_DLL herr_t H5Pget_elink_acc_flags(hid_t lapl_id, unsigned *flags);
H5_DLL herr_t H5Pset_elink_cb(hid_t lapl_id, H5L_elink_traverse_t func, void *op_data);
H5_DLL herr_t H5Pget_elink_cb(hid_t lapl_id, H5L_elink_traverse_t *func, void **op_data);
/* Object copy property list (OCPYPL) routines */
H5_DLL herr_t H5Pset_copy_object(hid_t plist_id, unsigned crt_intmd);
H5_DLL herr_t H5Pget_copy_object(hid_t plist_id, unsigned *crt_intmd /*out*/);
H5_DLL herr_t H5Padd_merge_committed_dtype_path(hid_t plist_id, const char *path);
H5_DLL herr_t H5Pfree_merge_committed_dtype_paths(hid_t plist_id);
H5_DLL herr_t H5Pset_mcdt_search_cb(hid_t plist_id, H5O_mcdt_search_cb_t func, void *op_data);
H5_DLL herr_t H5Pget_mcdt_search_cb(hid_t plist_id, H5O_mcdt_search_cb_t *func, void **op_data);
/* Symbols defined for compatibility with previous versions of the HDF5 API.
*
* Use of these symbols is deprecated.
*/
#ifndef H5_NO_DEPRECATED_SYMBOLS
/* Macros */
/* We renamed the "root" of the property list class hierarchy */
#define H5P_NO_CLASS H5P_ROOT
/* Typedefs */
/* Function prototypes */
H5_DLL herr_t H5Pregister1(hid_t cls_id, const char *name, size_t size, void *def_value,
H5P_prp_create_func_t prp_create, H5P_prp_set_func_t prp_set,
H5P_prp_get_func_t prp_get, H5P_prp_delete_func_t prp_del,
H5P_prp_copy_func_t prp_copy, H5P_prp_close_func_t prp_close);
H5_DLL herr_t H5Pinsert1(hid_t plist_id, const char *name, size_t size, void *value,
H5P_prp_set_func_t prp_set, H5P_prp_get_func_t prp_get,
H5P_prp_delete_func_t prp_delete, H5P_prp_copy_func_t prp_copy,
H5P_prp_close_func_t prp_close);
H5_DLL herr_t H5Pencode1(hid_t plist_id, void *buf, size_t *nalloc);
/**
*-------------------------------------------------------------------------
* \ingroup OCPL
*
* \brief Returns information about a filter in a pipeline (DEPRECATED)
*
* \todo H5Pget_filter1() prototype does not match source in H5Pocpl.c.
* Also, it is not in a deprecated file. Is that okay?
*
* \plist_id{plist_id}
* \param[in] filter Sequence number within the filter pipeline of the filter
* for which information is sought
* \param[out] flags Bit vector specifying certain general properties of
* the filter
* \param[in,out] cd_nelmts Number of elements in \p cd_values
* \param[out] cd_values Auxiliary data for the filter
* \param[in] namelen Anticipated number of characters in \p name
* \param[out] name Name of the filter
*
* \return Returns the filter identifier if successful; Otherwise returns
* a negative value. See: #H5Z_filter_t
*
* \details H5Pget_filter1() returns information about a filter, specified
* by its filter number, in a filter pipeline, specified by the
* property list with which it is associated.
*
* \p plist_id must be a dataset or group creation property list.
*
* \p filter is a value between zero and N-1, as described in
* H5Pget_nfilters(). The function will return a negative value
* if the filter number is out of range.
*
* The structure of the \p flags argument is discussed in
* H5Pset_filter().
*
* On input, \p cd_nelmts indicates the number of entries in the
* \p cd_values array, as allocated by the caller; on return,
* \p cd_nelmts contains the number of values defined by the filter.
*
* If \p name is a pointer to an array of at least \p namelen
* bytes, the filter name will be copied into that array. The name
* will be null terminated if \p namelen is large enough. The
* filter name returned will be the name appearing in the file, the
* name registered for the filter, or an empty string.
*
* \version 1.8.5 Function extended to work with group creation property
* lists.
* \version 1.8.0 N-bit and scale-offset filters added.
* \version 1.8.0 Function H5Pget_filter() renamed to H5Pget_filter1() and
* deprecated in this release.
* \version 1.6.4 \p filter parameter type changed to unsigned.
*
*/
H5_DLL H5Z_filter_t H5Pget_filter1(hid_t plist_id, unsigned filter, unsigned int *flags /*out*/,
size_t *cd_nelmts /*out*/, unsigned cd_values[] /*out*/, size_t namelen,
char name[]);
H5_DLL herr_t H5Pget_filter_by_id1(hid_t plist_id, H5Z_filter_t id, unsigned int *flags /*out*/,
size_t *cd_nelmts /*out*/, unsigned cd_values[] /*out*/, size_t namelen,
char name[] /*out*/);
H5_DLL herr_t H5Pget_version(hid_t plist_id, unsigned *boot /*out*/, unsigned *freelist /*out*/,
unsigned *stab /*out*/, unsigned *shhdr /*out*/);
H5_DLL herr_t H5Pset_file_space(hid_t plist_id, H5F_file_space_type_t strategy, hsize_t threshold);
H5_DLL herr_t H5Pget_file_space(hid_t plist_id, H5F_file_space_type_t *strategy, hsize_t *threshold);
#endif /* H5_NO_DEPRECATED_SYMBOLS */
#ifdef __cplusplus
}
#endif
#endif /* _H5Ppublic_H */
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