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/*
* Copyright (C) 1998 NCSA
* All rights reserved.
*
* Programmer: Robb Matzke <matzke@llnl.gov>
* Wednesday, January 21, 1998
*
* Purpose: Simple data space functions.
*/
#include <H5private.h>
#include <H5Eprivate.h>
#include <H5Pprivate.h>
/* Interface initialization */
#define PABLO_MASK H5P_simp_mask
#define INTERFACE_INIT NULL
static intn interface_initialize_g = FALSE;
/*-------------------------------------------------------------------------
* Function: H5P_simp_init
*
* Purpose: Generates element numbering information for the data
* spaces involved in a data space conversion.
*
* Return: Success: Number of elements that can be efficiently
* transferred at a time.
*
* Failure: Zero
*
* Programmer: Robb Matzke
* Wednesday, January 21, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
size_t
H5P_simp_init (const struct H5O_layout_t *layout, const H5P_t *mem_space,
const H5P_t *file_space, H5P_number_t *numbering/*out*/)
{
size_t nelmts;
FUNC_ENTER (H5P_simp_init, 0);
/* Check args */
assert (layout);
assert (mem_space && H5P_SIMPLE==mem_space->type);
assert (file_space && H5P_SIMPLE==file_space->type);
assert (numbering);
/* Numbering is implied by the hyperslab, C order */
HDmemset (numbering, 0, sizeof(H5P_number_t));
/* Data can be efficiently copied at any size */
nelmts = H5P_get_npoints (file_space);
FUNC_LEAVE (nelmts);
}
/*-------------------------------------------------------------------------
* Function: H5P_simp_fgath
*
* Purpose: Gathers data points from file F and accumulates them in the
* type conversion buffer BUF. The LAYOUT argument describes
* how the data is stored on disk. ELMT_SIZE is the size in
* bytes of a datum which this function treats as opaque.
* FILE_SPACE describes the data space of the dataset on disk
* and the elements that have been selected for reading (via
* hyperslab, etc) and NUMBERING describes how those elements
* are numbered (initialized by the H5P_*_init() call). This
* function will copy at most NELMTS elements beginning at the
* element numbered START.
*
* Return: Success: Number of elements copied.
*
* Failure: 0
*
* Programmer: Robb Matzke
* Wednesday, January 21, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
size_t
H5P_simp_fgath (H5F_t *f, const struct H5O_layout_t *layout,
size_t elmt_size, const H5P_t *file_space,
const H5P_number_t *numbering, intn start, intn nelmts,
void *buf/*out*/)
{
size_t offset[H5O_LAYOUT_NDIMS]; /*offset of hyperslab */
size_t size[H5O_LAYOUT_NDIMS]; /*size of hyperslab */
intn i; /*counters */
FUNC_ENTER (H5P_simp_fgath, 0);
/* Check args */
assert (f);
assert (layout);
assert (elmt_size>0);
assert (file_space);
assert (numbering);
assert (nelmts>0);
assert (buf);
/*
* The prototype doesn't support strip mining.
*/
assert (0==start);
assert (nelmts==H5P_get_npoints (file_space));
/*
* Quincey, this is where we look at FILE_SPACE to decide what the
* hyperslab is to read from disk. For now, since the H5P interface
* doesn't support hyperslabs, we'll assume the caller is asking for the
* entire array. --RPM
*/
assert (nelmts == H5P_get_npoints (file_space));
for (i=0; i<layout->ndims; i++) offset[i] = 0;
i = H5P_get_dims (file_space, size);
assert (i+1 == layout->ndims);
size[i] = elmt_size;
/*
* Gather from file.
*/
if (H5F_arr_read (f, layout, size, size, offset, offset, buf/*out*/)<0) {
HRETURN_ERROR (H5E_DATASPACE, H5E_READERROR, 0, "read error");
}
FUNC_LEAVE (nelmts);
}
/*-------------------------------------------------------------------------
* Function: H5P_simp_mscat
*
* Purpose: Scatters data points from the type conversion buffer
* TCONV_BUF to the application buffer BUF. Each element is
* ELMT_SIZE bytes and they are organized in application memory
* according to MEM_SPACE. The NUMBERING information together
* with START and NELMTS describe how the elements stored in
* TCONV_BUF are globally numbered.
*
* Return: Success: SUCCEED
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* Wednesday, January 21, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5P_simp_mscat (const void *tconv_buf, size_t elmt_size,
const H5P_t *mem_space, const H5P_number_t *numbering,
intn start, intn nelmts, void *buf/*out*/)
{
FUNC_ENTER (H5P_simp_mscat, FAIL);
/* Check args */
assert (tconv_buf);
assert (elmt_size>0);
assert (mem_space && H5P_SIMPLE==mem_space->type);
assert (numbering);
assert (nelmts>0);
assert (buf);
/*
* The prototype doesn't support strip mining.
*/
assert (0==start);
assert (nelmts==H5P_get_npoints (mem_space));
/*
* Quincey, this is where we look at the hyperslab spec of MEM_SPACE to
* figure out how to scatter. You'll probably end up calling
* H5V_hyper_copy(), but for now we just assume that data points
* are copied directly from TCONV_BUF to BUF.
*/
HDmemcpy (buf, tconv_buf, nelmts*elmt_size);
FUNC_LEAVE (SUCCEED);
}
/*-------------------------------------------------------------------------
* Function: H5P_simp_mgath
*
* Purpose: Gathers dataset elements from application memory BUF and
* copies them into the data type conversion buffer TCONV_BUF.
* Each element is ELMT_SIZE bytes and arranged in application
* memory according to MEM_SPACE. The elements selected from
* BUF by MEM_SPACE are numbered according to NUMBERING and the
* caller is requesting that at most NELMTS be gathered
* beginning with number START. The elements are packed into
* TCONV_BUF in order of their NUMBERING.
*
* Return: Success: Number of elements copied.
*
* Failure: 0
*
* Programmer: Robb Matzke
* Wednesday, January 21, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
size_t
H5P_simp_mgath (const void *buf, size_t elmt_size,
const H5P_t *mem_space, const H5P_number_t *numbering,
intn start, intn nelmts, void *tconv_buf/*out*/)
{
FUNC_ENTER (H5P_simp_mgath, 0);
/* Check args */
assert (buf);
assert (elmt_size>0);
assert (mem_space && H5P_SIMPLE==mem_space->type);
assert (numbering);
assert (nelmts>0);
assert (tconv_buf);
/*
* The prototype doesn't support strip mining.
*/
assert (0==start);
assert (nelmts==H5P_get_npoints (mem_space));
/*
* Quincey, this is where we look at the hyperslab spec of MEM_SPACE to
* figure out how to gather. You'll probably end up calling
* H5V_hyper_copy(), but for now we just assume that data points are
* copied directly from BUF to TCONV_BUF.
*/
HDmemcpy (tconv_buf, buf, nelmts*elmt_size);
FUNC_LEAVE (nelmts);
}
/*-------------------------------------------------------------------------
* Function: H5P_simp_fscat
*
* Purpose: Scatters dataset elements from the type conversion buffer BUF
* to the file F where the data points are arranged according to
* the file data space FILE_SPACE and stored according to
* LAYOUT. Each element is ELMT_SIZE bytes and has a unique
* number according to NUMBERING. The caller is requesting that
* NELMTS elements are coppied beginning with element number
* START.
*
* Return: Success: SUCCEED
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* Wednesday, January 21, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5P_simp_fscat (H5F_t *f, const struct H5O_layout_t *layout,
size_t elmt_size, const H5P_t *file_space,
const H5P_number_t *numbering, intn start, intn nelmts,
const void *buf)
{
size_t offset[H5O_LAYOUT_NDIMS]; /*offset of hyperslab */
size_t size[H5O_LAYOUT_NDIMS]; /*size of hyperslab */
intn i; /*counters */
FUNC_ENTER (H5P_simp_fscat, FAIL);
/* Check args */
assert (f);
assert (layout);
assert (elmt_size>0);
assert (file_space);
assert (numbering);
assert (nelmts>0);
assert (buf);
/*
* The prototype doesn't support strip mining.
*/
assert (0==start);
assert (nelmts==H5P_get_npoints (file_space));
/*
* Quincey, this is where we look at FILE_SPACE to decide what the
* hyperslab is to read from disk. For now, since the H5P interface
* doesn't support hyperslabs, we'll assume the caller is asking for the
* entire array. --RPM
*/
assert (nelmts == H5P_get_npoints (file_space));
for (i=0; i<layout->ndims; i++) offset[i] = 0;
i = H5P_get_dims (file_space, size);
assert (i+1 == layout->ndims);
size[i] = elmt_size;
/*
* Scatter to file.
*/
if (H5F_arr_write (f, layout, size, size, offset, offset, buf/*out*/)<0) {
HRETURN_ERROR (H5E_DATASPACE, H5E_WRITEERROR, 0, "write error");
}
FUNC_LEAVE (SUCCEED);
}
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