1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127
1128
1129
1130
1131
1132
1133
1134
1135
1136
1137
1138
1139
1140
1141
1142
1143
1144
1145
1146
1147
1148
1149
1150
1151
1152
1153
1154
1155
1156
1157
1158
1159
1160
1161
1162
1163
1164
1165
1166
1167
1168
1169
1170
1171
1172
1173
1174
1175
1176
1177
1178
1179
1180
1181
1182
1183
1184
1185
1186
1187
1188
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://www.hdfgroup.org/licenses. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* Programmer: Quincey Koziol <koziol@ncsa.uiuc.edu>
* Tuesday, June 16, 1998
*
* Purpose: "All" selection dataspace I/O functions.
*/
/****************/
/* Module Setup */
/****************/
#include "H5Smodule.h" /* This source code file is part of the H5S module */
/***********/
/* Headers */
/***********/
#include "H5private.h" /* Generic Functions */
#include "H5Eprivate.h" /* Error handling */
#include "H5Iprivate.h" /* ID Functions */
#include "H5Spkg.h" /* Dataspace functions */
#include "H5VMprivate.h" /* Vector functions */
/****************/
/* Local Macros */
/****************/
/******************/
/* Local Typedefs */
/******************/
/********************/
/* Local Prototypes */
/********************/
/* Selection callbacks */
static herr_t H5S__all_copy(H5S_t *dst, const H5S_t *src, hbool_t share_selection);
static herr_t H5S__all_release(H5S_t *space);
static htri_t H5S__all_is_valid(const H5S_t *space);
static hssize_t H5S__all_serial_size(const H5S_t *space);
static herr_t H5S__all_serialize(const H5S_t *space, uint8_t **p);
static herr_t H5S__all_deserialize(H5S_t **space, const uint8_t **p);
static herr_t H5S__all_bounds(const H5S_t *space, hsize_t *start, hsize_t *end);
static herr_t H5S__all_offset(const H5S_t *space, hsize_t *off);
static int H5S__all_unlim_dim(const H5S_t *space);
static htri_t H5S__all_is_contiguous(const H5S_t *space);
static htri_t H5S__all_is_single(const H5S_t *space);
static htri_t H5S__all_is_regular(const H5S_t *space);
static htri_t H5S__all_shape_same(const H5S_t *space1, const H5S_t *space2);
static htri_t H5S__all_intersect_block(const H5S_t *space, const hsize_t *start, const hsize_t *end);
static herr_t H5S__all_adjust_u(H5S_t *space, const hsize_t *offset);
static herr_t H5S__all_adjust_s(H5S_t *space, const hssize_t *offset);
static herr_t H5S__all_project_scalar(const H5S_t *space, hsize_t *offset);
static herr_t H5S__all_project_simple(const H5S_t *space, H5S_t *new_space, hsize_t *offset);
static herr_t H5S__all_iter_init(const H5S_t *space, H5S_sel_iter_t *iter);
/* Selection iteration callbacks */
static herr_t H5S__all_iter_coords(const H5S_sel_iter_t *iter, hsize_t *coords);
static herr_t H5S__all_iter_block(const H5S_sel_iter_t *iter, hsize_t *start, hsize_t *end);
static hsize_t H5S__all_iter_nelmts(const H5S_sel_iter_t *iter);
static htri_t H5S__all_iter_has_next_block(const H5S_sel_iter_t *iter);
static herr_t H5S__all_iter_next(H5S_sel_iter_t *sel_iter, size_t nelem);
static herr_t H5S__all_iter_next_block(H5S_sel_iter_t *sel_iter);
static herr_t H5S__all_iter_get_seq_list(H5S_sel_iter_t *iter, size_t maxseq, size_t maxbytes, size_t *nseq,
size_t *nbytes, hsize_t *off, size_t *len);
static herr_t H5S__all_iter_release(H5S_sel_iter_t *sel_iter);
/*****************************/
/* Library Private Variables */
/*****************************/
/*********************/
/* Package Variables */
/*********************/
/* Selection properties for "all" selections */
const H5S_select_class_t H5S_sel_all[1] = {{
H5S_SEL_ALL,
/* Methods on selection */
H5S__all_copy,
H5S__all_release,
H5S__all_is_valid,
H5S__all_serial_size,
H5S__all_serialize,
H5S__all_deserialize,
H5S__all_bounds,
H5S__all_offset,
H5S__all_unlim_dim,
NULL,
H5S__all_is_contiguous,
H5S__all_is_single,
H5S__all_is_regular,
H5S__all_shape_same,
H5S__all_intersect_block,
H5S__all_adjust_u,
H5S__all_adjust_s,
H5S__all_project_scalar,
H5S__all_project_simple,
H5S__all_iter_init,
}};
/*******************/
/* Local Variables */
/*******************/
/* Iteration properties for "all" selections */
static const H5S_sel_iter_class_t H5S_sel_iter_all[1] = {{
H5S_SEL_ALL,
/* Methods on selection iterator */
H5S__all_iter_coords,
H5S__all_iter_block,
H5S__all_iter_nelmts,
H5S__all_iter_has_next_block,
H5S__all_iter_next,
H5S__all_iter_next_block,
H5S__all_iter_get_seq_list,
H5S__all_iter_release,
}};
/*-------------------------------------------------------------------------
* Function: H5S__all_iter_init
*
* Purpose: Initializes iteration information for "all" selection.
*
* Return: Non-negative on success, negative on failure.
*
* Programmer: Quincey Koziol
* Tuesday, June 16, 1998
*
*-------------------------------------------------------------------------
*/
static herr_t
H5S__all_iter_init(const H5S_t H5_ATTR_UNUSED *space, H5S_sel_iter_t *iter)
{
FUNC_ENTER_STATIC_NOERR
/* Check args */
HDassert(space && H5S_SEL_ALL == H5S_GET_SELECT_TYPE(space));
HDassert(iter);
/* Start at the upper left location */
iter->u.all.elmt_offset = 0;
iter->u.all.byte_offset = 0;
/* Initialize type of selection iterator */
iter->type = H5S_sel_iter_all;
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5S__all_iter_init() */
/*-------------------------------------------------------------------------
* Function: H5S__all_iter_coords
*
* Purpose: Retrieve the current coordinates of iterator for current
* selection
*
* Return: Non-negative on success, negative on failure
*
* Programmer: Quincey Koziol
* Tuesday, April 22, 2003
*
*-------------------------------------------------------------------------
*/
static herr_t
H5S__all_iter_coords(const H5S_sel_iter_t *iter, hsize_t *coords)
{
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_STATIC
/* Check args */
HDassert(iter);
HDassert(coords);
/* Calculate the coordinates for the current iterator offset */
if (H5VM_array_calc(iter->u.all.elmt_offset, iter->rank, iter->dims, coords) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTGET, FAIL, "can't retrieve coordinates")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S__all_iter_coords() */
/*-------------------------------------------------------------------------
* Function: H5S__all_iter_block
*
* Purpose: Retrieve the current block of iterator for current
* selection
*
* Return: Non-negative on success, negative on failure
*
* Programmer: Quincey Koziol
* Monday, June 2, 2003
*
*-------------------------------------------------------------------------
*/
static herr_t
H5S__all_iter_block(const H5S_sel_iter_t *iter, hsize_t *start, hsize_t *end)
{
unsigned u; /* Local index variable */
FUNC_ENTER_STATIC_NOERR
/* Check args */
HDassert(iter);
HDassert(start);
HDassert(end);
for (u = 0; u < iter->rank; u++) {
/* Set the start of the 'all' block */
/* (Always '0' coordinates for now) */
start[u] = 0;
/* Compute the end of the 'all' block */
/* (Always size of the extent for now) */
end[u] = iter->dims[u] - 1;
} /* end for */
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5S__all_iter_block() */
/*-------------------------------------------------------------------------
* Function: H5S__all_iter_nelmts
*
* Purpose: Return number of elements left to process in iterator
*
* Return: Non-negative number of elements on success, zero on failure
*
* Programmer: Quincey Koziol
* Tuesday, June 16, 1998
*
*-------------------------------------------------------------------------
*/
static hsize_t
H5S__all_iter_nelmts(const H5S_sel_iter_t *iter)
{
FUNC_ENTER_STATIC_NOERR
/* Check args */
HDassert(iter);
FUNC_LEAVE_NOAPI(iter->elmt_left)
} /* end H5S__all_iter_nelmts() */
/*--------------------------------------------------------------------------
NAME
H5S__all_iter_has_next_block
PURPOSE
Check if there is another block left in the current iterator
USAGE
htri_t H5S__all_iter_has_next_block(iter)
const H5S_sel_iter_t *iter; IN: Pointer to selection iterator
RETURNS
Non-negative (TRUE/FALSE) on success/Negative on failure
DESCRIPTION
Check if there is another block available in the selection iterator.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static htri_t
H5S__all_iter_has_next_block(const H5S_sel_iter_t H5_ATTR_UNUSED *iter)
{
FUNC_ENTER_STATIC_NOERR
/* Check args */
HDassert(iter);
FUNC_LEAVE_NOAPI(FALSE)
} /* end H5S__all_iter_has_next_block() */
/*--------------------------------------------------------------------------
NAME
H5S__all_iter_next
PURPOSE
Increment selection iterator
USAGE
herr_t H5S__all_iter_next(iter, nelem)
H5S_sel_iter_t *iter; IN: Pointer to selection iterator
size_t nelem; IN: Number of elements to advance by
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Advance selection iterator to the NELEM'th next element in the selection.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S__all_iter_next(H5S_sel_iter_t *iter, size_t nelem)
{
FUNC_ENTER_STATIC_NOERR
/* Check args */
HDassert(iter);
HDassert(nelem > 0);
/* Increment the iterator */
iter->u.all.elmt_offset += nelem;
iter->u.all.byte_offset += (nelem * iter->elmt_size);
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5S__all_iter_next() */
/*--------------------------------------------------------------------------
NAME
H5S__all_iter_next_block
PURPOSE
Increment selection iterator to next block
USAGE
herr_t H5S__all_iter_next_block(iter)
H5S_sel_iter_t *iter; IN: Pointer to selection iterator
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Advance selection iterator to the next block in the selection.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S__all_iter_next_block(H5S_sel_iter_t H5_ATTR_UNUSED *iter)
{
FUNC_ENTER_STATIC_NOERR
/* Check args */
HDassert(iter);
FUNC_LEAVE_NOAPI(FAIL)
} /* end H5S__all_iter_next_block() */
/*--------------------------------------------------------------------------
NAME
H5S__all_iter_get_seq_list
PURPOSE
Create a list of offsets & lengths for a selection
USAGE
herr_t H5S__all_iter_get_seq_list(iter,maxseq,maxelem,nseq,nelem,off,len)
H5S_sel_iter_t *iter; IN/OUT: Selection iterator describing last
position of interest in selection.
size_t maxseq; IN: Maximum number of sequences to generate
size_t maxelem; IN: Maximum number of elements to include in the
generated sequences
size_t *nseq; OUT: Actual number of sequences generated
size_t *nelem; OUT: Actual number of elements in sequences generated
hsize_t *off; OUT: Array of offsets
size_t *len; OUT: Array of lengths
RETURNS
Non-negative on success/Negative on failure.
DESCRIPTION
Use the selection in the dataspace to generate a list of byte offsets and
lengths for the region(s) selected. Start/Restart from the position in the
ITER parameter. The number of sequences generated is limited by the MAXSEQ
parameter and the number of sequences actually generated is stored in the
NSEQ parameter.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S__all_iter_get_seq_list(H5S_sel_iter_t *iter, size_t H5_ATTR_UNUSED maxseq, size_t maxelem, size_t *nseq,
size_t *nelem, hsize_t *off, size_t *len)
{
size_t elem_used; /* The number of elements used */
FUNC_ENTER_STATIC_NOERR
/* Check args */
HDassert(iter);
HDassert(maxseq > 0);
HDassert(maxelem > 0);
HDassert(nseq);
HDassert(nelem);
HDassert(off);
HDassert(len);
/* Determine the actual number of elements to use */
H5_CHECK_OVERFLOW(iter->elmt_left, hsize_t, size_t);
elem_used = MIN(maxelem, (size_t)iter->elmt_left);
HDassert(elem_used > 0);
/* Compute the offset in the dataset */
off[0] = iter->u.all.byte_offset;
len[0] = elem_used * iter->elmt_size;
/* Should only need one sequence for 'all' selections */
*nseq = 1;
/* Set the number of elements used */
*nelem = elem_used;
/* Update the iterator */
iter->elmt_left -= elem_used;
iter->u.all.elmt_offset += elem_used;
iter->u.all.byte_offset += len[0];
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5S__all_iter_get_seq_list() */
/*--------------------------------------------------------------------------
NAME
H5S__all_iter_release
PURPOSE
Release "all" selection iterator information for a dataspace
USAGE
herr_t H5S__all_iter_release(iter)
H5S_sel_iter_t *iter; IN: Pointer to selection iterator
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Releases all information for a dataspace "all" selection iterator
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S__all_iter_release(H5S_sel_iter_t H5_ATTR_UNUSED *iter)
{
FUNC_ENTER_STATIC_NOERR
/* Check args */
HDassert(iter);
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5S__all_iter_release() */
/*--------------------------------------------------------------------------
NAME
H5S__all_release
PURPOSE
Release all selection information for a dataspace
USAGE
herr_t H5S__all_release(space)
H5S_t *space; IN: Pointer to dataspace
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Releases "all" selection information for a dataspace
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S__all_release(H5S_t *space)
{
FUNC_ENTER_STATIC_NOERR
/* Check args */
HDassert(space);
/* Reset the number of elements in the selection */
space->select.num_elem = 0;
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5S__all_release() */
/*--------------------------------------------------------------------------
NAME
H5S__all_copy
PURPOSE
Copy a selection from one dataspace to another
USAGE
herr_t H5S__all_copy(dst, src, share_selection)
H5S_t *dst; OUT: Pointer to the destination dataspace
H5S_t *src; IN: Pointer to the source dataspace
hbool_t; IN: Whether to share the selection between the dataspaces
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Copies the 'all' selection information from the source
dataspace to the destination dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S__all_copy(H5S_t *dst, const H5S_t H5_ATTR_UNUSED *src, hbool_t H5_ATTR_UNUSED share_selection)
{
FUNC_ENTER_STATIC_NOERR
HDassert(src);
HDassert(dst);
/* Set number of elements in selection */
dst->select.num_elem = (hsize_t)H5S_GET_EXTENT_NPOINTS(dst);
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5S__all_copy() */
/*--------------------------------------------------------------------------
NAME
H5S__all_is_valid
PURPOSE
Check whether the selection fits within the extent, with the current
offset defined.
USAGE
htri_t H5S__all_is_valid(space);
H5S_t *space; IN: Dataspace pointer to query
RETURNS
TRUE if the selection fits within the extent, FALSE if it does not and
Negative on an error.
DESCRIPTION
Determines if the current selection at the current offset fits within the
extent for the dataspace. Offset is irrelevant for this type of selection.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static htri_t
H5S__all_is_valid(const H5S_t H5_ATTR_UNUSED *space)
{
FUNC_ENTER_STATIC_NOERR
HDassert(space);
FUNC_LEAVE_NOAPI(TRUE)
} /* end H5S__all_is_valid() */
/*--------------------------------------------------------------------------
NAME
H5S__all_serial_size
PURPOSE
Determine the number of bytes needed to store the serialized "all"
selection information.
USAGE
hssize_t H5S__all_serial_size(space)
H5S_t *space; IN: Dataspace pointer to query
RETURNS
The number of bytes required on success, negative on an error.
DESCRIPTION
Determines the number of bytes required to serialize an "all"
selection for storage on disk.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static hssize_t
H5S__all_serial_size(const H5S_t H5_ATTR_UNUSED *space)
{
FUNC_ENTER_STATIC_NOERR
HDassert(space);
/* Basic number of bytes required to serialize point selection:
* <type (4 bytes)> + <version (4 bytes)> + <padding (4 bytes)> +
* <length (4 bytes)> = 16 bytes
*/
FUNC_LEAVE_NOAPI(16)
} /* end H5S__all_serial_size() */
/*--------------------------------------------------------------------------
NAME
H5S__all_serialize
PURPOSE
Serialize the current selection into a user-provided buffer.
USAGE
herr_t H5S__all_serialize(space, p)
const H5S_t *space; IN: Dataspace with selection to serialize
uint8_t **p; OUT: Pointer to buffer to put serialized
selection. Will be advanced to end of
serialized selection.
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Serializes the current element selection into a buffer. (Primarily for
storing on disk).
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S__all_serialize(const H5S_t *space, uint8_t **p)
{
uint8_t *pp = (*p); /* Local pointer for decoding */
FUNC_ENTER_STATIC_NOERR
/* Check args */
HDassert(space);
HDassert(p);
HDassert(pp);
/* Store the preamble information */
UINT32ENCODE(pp, (uint32_t)H5S_GET_SELECT_TYPE(space)); /* Store the type of selection */
UINT32ENCODE(pp, (uint32_t)H5S_ALL_VERSION_1); /* Store the version number */
UINT32ENCODE(pp, (uint32_t)0); /* Store the un-used padding */
UINT32ENCODE(pp, (uint32_t)0); /* Store the additional information length */
/* Update encoding pointer */
*p = pp;
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5S__all_serialize() */
/*--------------------------------------------------------------------------
NAME
H5S__all_deserialize
PURPOSE
Deserialize the current selection from a user-provided buffer.
USAGE
herr_t H5S_all_deserialize(space, p)
H5S_t **space; IN/OUT: Dataspace pointer to place
selection into
uint8 **p; OUT: Pointer to buffer holding serialized
selection. Will be advanced to end of
serialized selection.
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Deserializes the current selection into a buffer. (Primarily for retrieving
from disk).
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S__all_deserialize(H5S_t **space, const uint8_t **p)
{
uint32_t version; /* Version number */
H5S_t * tmp_space = NULL; /* Pointer to actual dataspace to use,
either *space or a newly allocated one */
herr_t ret_value = SUCCEED; /* return value */
FUNC_ENTER_STATIC
HDassert(p);
HDassert(*p);
/* As part of the efforts to push all selection-type specific coding
to the callbacks, the coding for the allocation of a null dataspace
is moved from H5S_select_deserialize() in H5Sselect.c.
This is needed for decoding virtual layout in H5O__layout_decode() */
/* Allocate space if not provided */
if (!*space) {
if (NULL == (tmp_space = H5S_create(H5S_SIMPLE)))
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCREATE, FAIL, "can't create dataspace")
} /* end if */
else
tmp_space = *space;
/* Decode version */
UINT32DECODE(*p, version);
if (version < H5S_ALL_VERSION_1 || version > H5S_ALL_VERSION_LATEST)
HGOTO_ERROR(H5E_DATASPACE, H5E_BADVALUE, FAIL, "bad version number for all selection")
/* Skip over the remainder of the header */
*p += 8;
/* Change to "all" selection */
if (H5S_select_all(tmp_space, TRUE) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTDELETE, FAIL, "can't change selection")
/* Return space to the caller if allocated */
if (!*space)
*space = tmp_space;
done:
/* Free temporary space if not passed to caller (only happens on error) */
if (!*space && tmp_space)
if (H5S_close(tmp_space) < 0)
HDONE_ERROR(H5E_DATASPACE, H5E_CANTFREE, FAIL, "can't close dataspace")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S__all_deserialize() */
/*--------------------------------------------------------------------------
NAME
H5S__all_bounds
PURPOSE
Gets the bounding box containing the selection.
USAGE
herr_t H5S__all_bounds(space, start, end)
H5S_t *space; IN: Dataspace pointer of selection to query
hsize_t *start; OUT: Starting coordinate of bounding box
hsize_t *end; OUT: Opposite coordinate of bounding box
RETURNS
Non-negative on success, negative on failure
DESCRIPTION
Retrieves the bounding box containing the current selection and places
it into the user's buffers. The start and end buffers must be large
enough to hold the dataspace rank number of coordinates. The bounding box
exactly contains the selection, ie. if a 2-D element selection is currently
defined with the following points: (4,5), (6,8) (10,7), the bounding box
with be (4, 5), (10, 8). Calling this function on a "none" selection
returns fail.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S__all_bounds(const H5S_t *space, hsize_t *start, hsize_t *end)
{
unsigned rank; /* Dataspace rank */
unsigned i; /* index variable */
FUNC_ENTER_STATIC_NOERR
HDassert(space);
HDassert(start);
HDassert(end);
/* Get the dataspace extent rank */
rank = space->extent.rank;
/* Just copy over the complete extent */
for (i = 0; i < rank; i++) {
start[i] = 0;
end[i] = space->extent.size[i] - 1;
} /* end for */
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5S__all_bounds() */
/*--------------------------------------------------------------------------
NAME
H5S__all_offset
PURPOSE
Gets the linear offset of the first element for the selection.
USAGE
herr_t H5S__all_offset(space, offset)
const H5S_t *space; IN: Dataspace pointer of selection to query
hsize_t *offset; OUT: Linear offset of first element in selection
RETURNS
Non-negative on success, negative on failure
DESCRIPTION
Retrieves the linear offset (in "units" of elements) of the first element
selected within the dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
Calling this function on a "none" selection returns fail.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S__all_offset(const H5S_t H5_ATTR_UNUSED *space, hsize_t *offset)
{
FUNC_ENTER_STATIC_NOERR
HDassert(space);
HDassert(offset);
/* 'All' selections always start at offset 0 */
*offset = 0;
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5S__all_offset() */
/*--------------------------------------------------------------------------
NAME
H5S__all_unlim_dim
PURPOSE
Return unlimited dimension of selection, or -1 if none
USAGE
int H5S__all_unlim_dim(space)
H5S_t *space; IN: Dataspace pointer to check
RETURNS
Unlimited dimension of selection, or -1 if none (never fails).
DESCRIPTION
Returns the index of the unlimited dimension in this selection, or -1
if the selection has no unlimited dimension. "All" selections are
always unlimited in every dimension, though this is not reflected in
other calls, where the selection is "clipped" against the current
extent, so for consistency this function always returns -1.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static int
H5S__all_unlim_dim(const H5S_t H5_ATTR_UNUSED *space)
{
FUNC_ENTER_STATIC_NOERR
FUNC_LEAVE_NOAPI(-1)
} /* end H5S__all_unlim_dim() */
/*--------------------------------------------------------------------------
NAME
H5S__all_is_contiguous
PURPOSE
Check if a "all" selection is contiguous within the dataspace extent.
USAGE
htri_t H5S__all_is_contiguous(space)
H5S_t *space; IN: Dataspace pointer to check
RETURNS
TRUE/FALSE/FAIL
DESCRIPTION
Checks to see if the current selection in the dataspace is contiguous.
This is primarily used for reading the entire selection in one swoop.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static htri_t
H5S__all_is_contiguous(const H5S_t H5_ATTR_UNUSED *space)
{
FUNC_ENTER_STATIC_NOERR
HDassert(space);
FUNC_LEAVE_NOAPI(TRUE)
} /* end H5S__all_is_contiguous() */
/*--------------------------------------------------------------------------
NAME
H5S__all_is_single
PURPOSE
Check if a "all" selection is a single block within the dataspace extent.
USAGE
htri_t H5S__all_is_single(space)
H5S_t *space; IN: Dataspace pointer to check
RETURNS
TRUE/FALSE/FAIL
DESCRIPTION
Checks to see if the current selection in the dataspace is a single block.
This is primarily used for reading the entire selection in one swoop.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static htri_t
H5S__all_is_single(const H5S_t H5_ATTR_UNUSED *space)
{
FUNC_ENTER_STATIC_NOERR
HDassert(space);
FUNC_LEAVE_NOAPI(TRUE)
} /* end H5S__all_is_single() */
/*--------------------------------------------------------------------------
NAME
H5S__all_is_regular
PURPOSE
Check if a "all" selection is "regular"
USAGE
htri_t H5S__all_is_regular(space)
const H5S_t *space; IN: Dataspace pointer to check
RETURNS
TRUE/FALSE/FAIL
DESCRIPTION
Checks to see if the current selection in a dataspace is the a regular
pattern.
This is primarily used for reading the entire selection in one swoop.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static htri_t
H5S__all_is_regular(const H5S_t H5_ATTR_UNUSED *space)
{
FUNC_ENTER_STATIC_NOERR
/* Check args */
HDassert(space);
FUNC_LEAVE_NOAPI(TRUE)
} /* end H5S__all_is_regular() */
/*--------------------------------------------------------------------------
NAME
H5S__all_shape_same
PURPOSE
Check if a two "all" selections are the same shape
USAGE
htri_t H5S__all_shape_same(space1, space2)
const H5S_t *space1; IN: First dataspace to check
const H5S_t *space2; IN: Second dataspace to check
RETURNS
TRUE / FALSE / FAIL
DESCRIPTION
Checks to see if the current selection in each dataspace are the same
shape.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static htri_t
H5S__all_shape_same(const H5S_t *space1, const H5S_t *space2)
{
int space1_dim; /* Current dimension in first dataspace */
int space2_dim; /* Current dimension in second dataspace */
htri_t ret_value = TRUE; /* Return value */
FUNC_ENTER_STATIC_NOERR
/* Check args */
HDassert(space1);
HDassert(space2);
/* Initialize dataspace dims */
space1_dim = (int)space1->extent.rank - 1;
space2_dim = (int)space2->extent.rank - 1;
/* Recall that space1_rank >= space2_rank.
*
* In the following while loop, we test to see if space1 and space2
* have identical size in all dimensions they have in common.
*/
while (space2_dim >= 0) {
if (space1->extent.size[space1_dim] != space2->extent.size[space2_dim])
HGOTO_DONE(FALSE)
space1_dim--;
space2_dim--;
} /* end while */
/* Since we are selecting the entire space, we must also verify that space1
* has size 1 in all dimensions that it does not share with space2.
*/
while (space1_dim >= 0) {
if (space1->extent.size[space1_dim] != 1)
HGOTO_DONE(FALSE)
space1_dim--;
} /* end while */
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S__all_shape_same() */
/*--------------------------------------------------------------------------
NAME
H5S__all_intersect_block
PURPOSE
Detect intersections of selection with block
USAGE
htri_t H5S__all_intersect_block(space, start, end)
const H5S_t *space; IN: Dataspace with selection to use
const hsize_t *start; IN: Starting coordinate for block
const hsize_t *end; IN: Ending coordinate for block
RETURNS
Non-negative TRUE / FALSE on success, negative on failure
DESCRIPTION
Quickly detect intersections with a block
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
htri_t
H5S__all_intersect_block(const H5S_t H5_ATTR_UNUSED *space, const hsize_t H5_ATTR_UNUSED *start,
const hsize_t H5_ATTR_UNUSED *end)
{
FUNC_ENTER_STATIC_NOERR
/* Sanity check */
HDassert(space);
HDassert(H5S_SEL_ALL == H5S_GET_SELECT_TYPE(space));
HDassert(start);
HDassert(end);
FUNC_LEAVE_NOAPI(TRUE)
} /* end H5S__all_intersect_block() */
/*--------------------------------------------------------------------------
NAME
H5S__all_adjust_u
PURPOSE
Adjust an "all" selection by subtracting an offset
USAGE
herr_t H5S__all_adjust_u(space, offset)
H5S_t *space; IN/OUT: Pointer to dataspace to adjust
const hsize_t *offset; IN: Offset to subtract
RETURNS
Non-negative on success, negative on failure
DESCRIPTION
Moves selection by subtracting an offset from it.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S__all_adjust_u(H5S_t H5_ATTR_UNUSED *space, const hsize_t H5_ATTR_UNUSED *offset)
{
FUNC_ENTER_STATIC_NOERR
/* Check args */
HDassert(space);
HDassert(offset);
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5S__all_adjust_u() */
/*--------------------------------------------------------------------------
NAME
H5S__all_adjust_s
PURPOSE
Adjust an "all" selection by subtracting an offset
USAGE
herr_t H5S__all_adjust_u(space, offset)
H5S_t *space; IN/OUT: Pointer to dataspace to adjust
const hssize_t *offset; IN: Offset to subtract
RETURNS
Non-negative on success, negative on failure
DESCRIPTION
Moves selection by subtracting an offset from it.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S__all_adjust_s(H5S_t H5_ATTR_UNUSED *space, const hssize_t H5_ATTR_UNUSED *offset)
{
FUNC_ENTER_STATIC_NOERR
/* Check args */
HDassert(space);
HDassert(offset);
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5S__all_adjust_s() */
/*-------------------------------------------------------------------------
* Function: H5S__all_project_scalar
*
* Purpose: Projects a single element 'all' selection into a scalar
* dataspace
*
* Return: Non-negative on success, negative on failure.
*
* Programmer: Quincey Koziol
* Sunday, July 18, 2010
*
*-------------------------------------------------------------------------
*/
static herr_t
H5S__all_project_scalar(const H5S_t H5_ATTR_UNUSED *space, hsize_t *offset)
{
FUNC_ENTER_STATIC_NOERR
/* Check args */
HDassert(space && H5S_SEL_ALL == H5S_GET_SELECT_TYPE(space));
HDassert(offset);
/* Set offset of selection in projected buffer */
*offset = 0;
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5S__all_project_scalar() */
/*-------------------------------------------------------------------------
* Function: H5S__all_project_simple
*
* Purpose: Projects an 'all' selection onto/into a simple dataspace
* of a different rank
*
* Return: Non-negative on success, negative on failure.
*
* Programmer: Quincey Koziol
* Sunday, July 18, 2010
*
*-------------------------------------------------------------------------
*/
static herr_t
H5S__all_project_simple(const H5S_t H5_ATTR_UNUSED *base_space, H5S_t *new_space,
hsize_t H5_ATTR_UNUSED *offset)
{
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_STATIC
/* Check args */
HDassert(base_space && H5S_SEL_ALL == H5S_GET_SELECT_TYPE(base_space));
HDassert(new_space);
HDassert(offset);
/* Select the entire new space */
if (H5S_select_all(new_space, TRUE) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTSET, FAIL, "unable to set all selection")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S__all_project_simple() */
/*--------------------------------------------------------------------------
NAME
H5S_select_all
PURPOSE
Specify the the entire extent is selected
USAGE
herr_t H5S_select_all(dsid)
hid_t dsid; IN: Dataspace ID of selection to modify
hbool_t rel_prev; IN: Flag whether to release previous selection or not
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
This function selects the entire extent for a dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5S_select_all(H5S_t *space, hbool_t rel_prev)
{
herr_t ret_value = SUCCEED; /* return value */
FUNC_ENTER_NOAPI(FAIL)
/* Check args */
HDassert(space);
/* Remove current selection first */
if (rel_prev)
if (H5S_SELECT_RELEASE(space) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTDELETE, FAIL, "can't release selection")
/* Set number of elements in selection */
space->select.num_elem = (hsize_t)H5S_GET_EXTENT_NPOINTS(space);
/* Set selection type */
space->select.type = H5S_sel_all;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_select_all() */
/*--------------------------------------------------------------------------
NAME
H5Sselect_all
PURPOSE
Specify the the entire extent is selected
USAGE
herr_t H5Sselect_all(dsid)
hid_t dsid; IN: Dataspace ID of selection to modify
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
This function selects the entire extent for a dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5Sselect_all(hid_t spaceid)
{
H5S_t *space; /* Dataspace to modify selection of */
herr_t ret_value = SUCCEED; /* return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", spaceid);
/* Check args */
if (NULL == (space = (H5S_t *)H5I_object_verify(spaceid, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace")
/* Call internal routine to do the work */
if (H5S_select_all(space, TRUE) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTDELETE, FAIL, "can't change selection")
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Sselect_all() */
|