1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127
1128
1129
1130
1131
1132
1133
1134
1135
1136
1137
1138
1139
1140
1141
1142
1143
1144
1145
1146
1147
1148
1149
1150
1151
1152
1153
1154
1155
1156
1157
1158
1159
1160
1161
1162
1163
1164
1165
1166
1167
1168
1169
1170
1171
1172
1173
1174
1175
1176
1177
1178
1179
1180
1181
1182
1183
1184
1185
1186
1187
1188
1189
1190
1191
1192
1193
1194
1195
1196
1197
1198
1199
1200
1201
1202
1203
1204
1205
1206
1207
1208
1209
1210
1211
1212
1213
1214
1215
1216
1217
1218
1219
1220
1221
1222
1223
1224
1225
1226
1227
1228
1229
1230
1231
1232
1233
1234
1235
1236
1237
1238
1239
1240
1241
1242
1243
1244
1245
1246
1247
1248
1249
1250
1251
1252
1253
1254
1255
1256
1257
1258
1259
1260
1261
1262
1263
1264
1265
1266
1267
1268
1269
1270
1271
1272
1273
1274
1275
1276
1277
1278
1279
1280
1281
1282
1283
1284
1285
1286
1287
1288
1289
1290
1291
1292
1293
1294
1295
1296
1297
1298
1299
1300
1301
1302
1303
1304
1305
1306
1307
1308
1309
1310
1311
1312
1313
1314
1315
1316
1317
1318
1319
1320
1321
1322
1323
1324
1325
1326
1327
1328
1329
1330
1331
1332
1333
1334
1335
1336
1337
1338
1339
1340
1341
1342
1343
1344
1345
1346
1347
1348
1349
1350
1351
1352
1353
1354
1355
1356
1357
1358
1359
1360
1361
1362
1363
1364
1365
1366
1367
1368
1369
1370
1371
1372
1373
1374
1375
1376
1377
1378
1379
1380
1381
1382
1383
1384
1385
1386
1387
1388
1389
1390
1391
1392
1393
1394
1395
1396
1397
1398
1399
1400
1401
1402
1403
1404
1405
1406
1407
1408
1409
1410
1411
1412
1413
1414
1415
1416
1417
1418
1419
1420
1421
1422
1423
1424
1425
1426
1427
1428
1429
1430
1431
1432
1433
1434
1435
1436
1437
1438
1439
1440
1441
1442
1443
1444
1445
1446
1447
1448
1449
1450
1451
1452
1453
1454
1455
1456
1457
1458
1459
1460
1461
1462
1463
1464
1465
1466
1467
1468
1469
1470
1471
1472
1473
1474
1475
1476
1477
1478
1479
1480
1481
1482
1483
1484
1485
1486
1487
1488
1489
1490
1491
1492
1493
1494
1495
1496
1497
1498
1499
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/* Programmer: Quincey Koziol <koziol@ncsa.uiuc.ued>
* Friday, May 29, 1998
*
* Purpose: Dataspace selection functions.
*/
#define H5S_PACKAGE /*suppress error about including H5Spkg */
#include "H5private.h" /* Generic Functions */
#include "H5Dprivate.h" /* Datasets */
#include "H5Eprivate.h" /* Error handling */
#include "H5FLprivate.h" /* Free Lists */
#include "H5Iprivate.h" /* IDs */
#include "H5Spkg.h" /* Dataspaces */
#include "H5Vprivate.h" /* Vector and array functions */
#include "H5WBprivate.h" /* Wrapped Buffers */
/* Local functions */
#ifdef LATER
static herr_t H5S_select_iter_block (const H5S_sel_iter_t *iter, hsize_t *start, hsize_t *end);
static htri_t H5S_select_iter_has_next_block (const H5S_sel_iter_t *iter);
static herr_t H5S_select_iter_next_block(H5S_sel_iter_t *iter);
#endif /* LATER */
/*--------------------------------------------------------------------------
NAME
H5S_select_offset
PURPOSE
Set the selection offset for a datapace
USAGE
herr_t H5S_select_offset(space, offset)
H5S_t *space; IN/OUT: Dataspace object to set selection offset
const hssize_t *offset; IN: Offset to position the selection at
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Sets the selection offset for the dataspace
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
Only works for simple dataspaces currently
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5S_select_offset(H5S_t *space, const hssize_t *offset)
{
FUNC_ENTER_NOAPI_NOFUNC(H5S_select_offset);
/* Check args */
assert(space);
assert(space->extent.rank);
assert(offset);
/* Copy the offset over */
HDmemcpy(space->select.offset,offset,sizeof(hssize_t)*space->extent.rank);
FUNC_LEAVE_NOAPI(SUCCEED);
} /* H5S_select_offset() */
/*--------------------------------------------------------------------------
NAME
H5S_select_copy
PURPOSE
Copy a selection from one dataspace to another
USAGE
herr_t H5S_select_copy(dst, src)
H5S_t *dst; OUT: Pointer to the destination dataspace
H5S_t *src; IN: Pointer to the source dataspace
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Copies all the selection information (include offset) from the source
dataspace to the destination dataspace.
If the SHARE_SELECTION flag is set, then the selection can be shared
between the source and destination dataspaces. (This should only occur in
situations where the destination dataspace will immediately change to a new
selection)
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5S_select_copy (H5S_t *dst, const H5S_t *src, hbool_t share_selection)
{
herr_t ret_value; /* return value */
FUNC_ENTER_NOAPI(H5S_select_copy, FAIL);
/* Check args */
assert(dst);
assert(src);
/* Copy regular fields */
dst->select=src->select;
/* Perform correct type of copy based on the type of selection */
if((ret_value=(*src->select.type->copy)(dst,src,share_selection))<0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCOPY, FAIL, "can't copy selection specific information");
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* H5S_select_copy() */
/*-------------------------------------------------------------------------
* Function: H5S_select_release
*
* Purpose: Releases all memory associated with a dataspace selection.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Friday, May 30, 2003
*
* Note: This routine participates in the "Inlining C function pointers"
* pattern, don't call it directly, use the appropriate macro
* defined in H5Sprivate.h.
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5S_select_release(H5S_t *ds)
{
herr_t ret_value; /* Return value */
FUNC_ENTER_NOAPI_NOFUNC(H5S_select_release);
assert(ds);
/* Call the selection type's release function */
ret_value=(*ds->select.type->release)(ds);
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5S_select_release() */
/*-------------------------------------------------------------------------
* Function: H5S_select_get_seq_list
*
* Purpose: Retrieves the next sequence of offset/length pairs for an
* iterator on a dataspace
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Tuesday, May 18, 2004
*
* Note: This routine participates in the "Inlining C function pointers"
* pattern, don't call it directly, use the appropriate macro
* defined in H5Sprivate.h.
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5S_select_get_seq_list(const H5S_t *space, unsigned flags,
H5S_sel_iter_t *iter, size_t maxseq, size_t maxbytes,
size_t *nseq, size_t *nbytes, hsize_t *off, size_t *len)
{
herr_t ret_value; /* Return value */
FUNC_ENTER_NOAPI_NOFUNC(H5S_select_get_seq_list);
assert(space);
/* Call the selection type's get_seq_list function */
ret_value=(*space->select.type->get_seq_list)(space,flags,iter,maxseq,maxbytes,nseq,nbytes,off,len);
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5S_select_get_seq_list() */
/*-------------------------------------------------------------------------
* Function: H5S_select_serial_size
*
* Purpose: Determines the number of bytes required to store the current
* selection
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Tuesday, May 18, 2004
*
* Note: This routine participates in the "Inlining C function pointers"
* pattern, don't call it directly, use the appropriate macro
* defined in H5Sprivate.h.
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
hssize_t
H5S_select_serial_size(const H5S_t *space)
{
hssize_t ret_value; /* Return value */
FUNC_ENTER_NOAPI_NOFUNC(H5S_select_serial_size);
assert(space);
/* Call the selection type's serial_size function */
ret_value=(*space->select.type->serial_size)(space);
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5S_select_serial_size() */
/*--------------------------------------------------------------------------
NAME
H5S_select_serialize
PURPOSE
Serialize the selection for a dataspace into a buffer
USAGE
herr_t H5S_select_serialize(space, buf)
const H5S_t *space; IN: Dataspace with selection to serialize
uint8_t *buf; OUT: Buffer to put serialized selection
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Calls the appropriate dataspace selection callback to serialize the
current selection into a buffer.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
This routine participates in the "Inlining C function pointers"
pattern, don't call it directly, use the appropriate macro
defined in H5Sprivate.h.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5S_select_serialize(const H5S_t *space, uint8_t *buf)
{
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOFUNC(H5S_select_serialize);
assert(space);
assert(buf);
/* Call the selection type's serialize function */
ret_value=(*space->select.type->serialize)(space,buf);
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5S_select_serialize() */
/*--------------------------------------------------------------------------
NAME
H5Sget_select_npoints
PURPOSE
Get the number of elements in current selection
USAGE
hssize_t H5Sget_select_npoints(dsid)
hid_t dsid; IN: Dataspace ID of selection to query
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Returns the number of elements in current selection for dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
hssize_t
H5Sget_select_npoints(hid_t spaceid)
{
H5S_t *space = NULL; /* Dataspace to modify selection of */
hssize_t ret_value; /* return value */
FUNC_ENTER_API(H5Sget_select_npoints, FAIL);
H5TRACE1("Hs", "i", spaceid);
/* Check args */
if (NULL == (space=H5I_object_verify(spaceid, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace");
ret_value = H5S_GET_SELECT_NPOINTS(space);
done:
FUNC_LEAVE_API(ret_value);
} /* H5Sget_select_npoints() */
/*--------------------------------------------------------------------------
NAME
H5S_get_select_npoints
PURPOSE
Get the number of elements in current selection
USAGE
hssize_t H5Sget_select_npoints(space)
H5S_t *space; IN: Dataspace of selection to query
RETURNS
The number of elements in selection on success, 0 on failure
DESCRIPTION
Returns the number of elements in current selection for dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
This routine participates in the "Inlining C function pointers"
pattern, don't call it directly, use the appropriate macro
defined in H5Sprivate.h.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
hssize_t
H5S_get_select_npoints(const H5S_t *space)
{
FUNC_ENTER_NOAPI_NOFUNC(H5S_get_select_npoints);
/* Check args */
assert(space);
FUNC_LEAVE_NOAPI(space->select.num_elem);
} /* H5S_get_select_npoints() */
/*--------------------------------------------------------------------------
NAME
H5Sselect_valid
PURPOSE
Check whether the selection fits within the extent, with the current
offset defined.
USAGE
htri_t H5Sselect_void(dsid)
hid_t dsid; IN: Dataspace ID to query
RETURNS
TRUE if the selection fits within the extent, FALSE if it does not and
Negative on an error.
DESCRIPTION
Determines if the current selection at the current offet fits within the
extent for the dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
Christian Chilan 01/17/2007
Changed the error return value from 0 to FAIL.
--------------------------------------------------------------------------*/
htri_t
H5Sselect_valid(hid_t spaceid)
{
H5S_t *space = NULL; /* Dataspace to modify selection of */
htri_t ret_value; /* return value */
FUNC_ENTER_API(H5Sselect_valid, FAIL);
H5TRACE1("t", "i", spaceid);
/* Check args */
if (NULL == (space=H5I_object_verify(spaceid, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace");
ret_value = H5S_SELECT_VALID(space);
done:
FUNC_LEAVE_API(ret_value);
} /* H5Sselect_valid() */
/*--------------------------------------------------------------------------
NAME
H5S_select_valid
PURPOSE
Check whether the selection fits within the extent, with the current
offset defined.
USAGE
htri_t H5S_select_void(space)
H5S_t *space; IN: Dataspace to query
RETURNS
TRUE if the selection fits within the extent, FALSE if it does not and
Negative on an error.
DESCRIPTION
Determines if the current selection at the current offet fits within the
extent for the dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
This routine participates in the "Inlining C function pointers"
pattern, don't call it directly, use the appropriate macro
defined in H5Sprivate.h.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
htri_t
H5S_select_valid(const H5S_t *space)
{
htri_t ret_value; /* Return value */
FUNC_ENTER_NOAPI_NOFUNC(H5S_select_valid);
assert(space);
ret_value = (*space->select.type->is_valid)(space);
FUNC_LEAVE_NOAPI(ret_value);
} /* H5S_select_valid() */
/*--------------------------------------------------------------------------
NAME
H5S_select_deserialize
PURPOSE
Deserialize the current selection from a user-provided buffer into a real
selection in the dataspace.
USAGE
herr_t H5S_select_deserialize(space, buf)
H5S_t *space; IN/OUT: Dataspace pointer to place selection into
uint8 *buf; IN: Buffer to retrieve serialized selection from
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Deserializes the current selection into a buffer. (Primarily for retrieving
from disk). This routine just hands off to the appropriate routine for each
type of selection. The format of the serialized information is shown in
the H5S_select_serialize() header.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5S_select_deserialize (H5S_t *space, const uint8_t *buf)
{
const uint8_t *tbuf; /* Temporary pointer to the selection type */
uint32_t sel_type; /* Pointer to the selection type */
herr_t ret_value=FAIL; /* return value */
FUNC_ENTER_NOAPI(H5S_select_deserialize, FAIL);
assert(space);
tbuf=buf;
UINT32DECODE(tbuf, sel_type);
switch(sel_type) {
case H5S_SEL_POINTS: /* Sequence of points selected */
ret_value=(*H5S_sel_point->deserialize)(space,buf);
break;
case H5S_SEL_HYPERSLABS: /* Hyperslab selection defined */
ret_value=(*H5S_sel_hyper->deserialize)(space,buf);
break;
case H5S_SEL_ALL: /* Entire extent selected */
ret_value=(*H5S_sel_all->deserialize)(space,buf);
break;
case H5S_SEL_NONE: /* Nothing selected */
ret_value=(*H5S_sel_none->deserialize)(space,buf);
break;
default:
break;
}
if(ret_value<0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTLOAD, FAIL, "can't deserialize selection");
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* H5S_select_deserialize() */
/*--------------------------------------------------------------------------
NAME
H5Sget_select_bounds
PURPOSE
Gets the bounding box containing the selection.
USAGE
herr_t H5S_get_select_bounds(space, start, end)
hid_t dsid; IN: Dataspace ID of selection to query
hsize_t *start; OUT: Starting coordinate of bounding box
hsize_t *end; OUT: Opposite coordinate of bounding box
RETURNS
Non-negative on success, negative on failure
DESCRIPTION
Retrieves the bounding box containing the current selection and places
it into the user's buffers. The start and end buffers must be large
enough to hold the dataspace rank number of coordinates. The bounding box
exactly contains the selection, ie. if a 2-D element selection is currently
defined with the following points: (4,5), (6,8) (10,7), the bounding box
with be (4, 5), (10, 8). Calling this function on a "none" selection
returns fail.
The bounding box calculations _does_ include the current offset of the
selection within the dataspace extent.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
This routine participates in the "Inlining C function pointers"
pattern, don't call it directly, use the appropriate macro
defined in H5Sprivate.h.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5Sget_select_bounds(hid_t spaceid, hsize_t *start, hsize_t *end)
{
H5S_t *space = NULL; /* Dataspace to modify selection of */
herr_t ret_value; /* return value */
FUNC_ENTER_API(H5Sget_select_bounds, FAIL);
H5TRACE3("e", "i*h*h", spaceid, start, end);
/* Check args */
if(start==NULL || end==NULL)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid pointer");
if (NULL == (space=H5I_object_verify(spaceid, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace");
ret_value = H5S_SELECT_BOUNDS(space,start,end);
done:
FUNC_LEAVE_API(ret_value);
} /* H5Sget_select_bounds() */
/*--------------------------------------------------------------------------
NAME
H5S_get_select_bounds
PURPOSE
Gets the bounding box containing the selection.
USAGE
herr_t H5S_get_select_bounds(space, start, end)
H5S_t *space; IN: Dataspace ID of selection to query
hsize_t *start; OUT: Starting coordinate of bounding box
hsize_t *end; OUT: Opposite coordinate of bounding box
RETURNS
Non-negative on success, negative on failure
DESCRIPTION
Retrieves the bounding box containing the current selection and places
it into the user's buffers. The start and end buffers must be large
enough to hold the dataspace rank number of coordinates. The bounding box
exactly contains the selection, ie. if a 2-D element selection is currently
defined with the following points: (4,5), (6,8) (10,7), the bounding box
with be (4, 5), (10, 8). Calling this function on a "none" selection
returns fail.
The bounding box calculations _does_ include the current offset of the
selection within the dataspace extent.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5S_get_select_bounds(const H5S_t *space, hsize_t *start, hsize_t *end)
{
herr_t ret_value; /* return value */
FUNC_ENTER_NOAPI_NOFUNC(H5S_get_select_bounds);
/* Check args */
assert(space);
assert(start);
assert(end);
ret_value = (*space->select.type->bounds)(space,start,end);
FUNC_LEAVE_NOAPI(ret_value);
} /* H5S_get_select_bounds() */
/*--------------------------------------------------------------------------
NAME
H5S_select_is_contiguous
PURPOSE
Determines if a selection is contiguous in the dataspace
USAGE
htri_t H5S_select_is_contiguous(space)
const H5S_t *space; IN: Dataspace of selection to query
RETURNS
Non-negative (TRUE/FALSE) on success, negative on failure
DESCRIPTION
Checks the selection to determine if the points to iterated over will be
contiguous in the particular dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
This routine participates in the "Inlining C function pointers"
pattern, don't call it directly, use the appropriate macro
defined in H5Sprivate.h.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
htri_t
H5S_select_is_contiguous(const H5S_t *space)
{
herr_t ret_value; /* return value */
FUNC_ENTER_NOAPI_NOFUNC(H5S_select_is_contiguous);
/* Check args */
assert(space);
ret_value = (*space->select.type->is_contiguous)(space);
FUNC_LEAVE_NOAPI(ret_value);
} /* H5S_select_is_contiguous() */
/*--------------------------------------------------------------------------
NAME
H5S_select_is_single
PURPOSE
Determines if a selection is a single block in the dataspace
USAGE
htri_t H5S_select_is_single(space)
const H5S_t *space; IN: Dataspace of selection to query
RETURNS
Non-negative (TRUE/FALSE) on success, negative on failure
DESCRIPTION
Checks the selection to determine if it occupies a single block in the
particular dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
This routine participates in the "Inlining C function pointers"
pattern, don't call it directly, use the appropriate macro
defined in H5Sprivate.h.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
htri_t
H5S_select_is_single(const H5S_t *space)
{
herr_t ret_value; /* return value */
FUNC_ENTER_NOAPI_NOFUNC(H5S_select_is_single);
/* Check args */
assert(space);
ret_value = (*space->select.type->is_single)(space);
FUNC_LEAVE_NOAPI(ret_value);
} /* H5S_select_is_single() */
/*--------------------------------------------------------------------------
NAME
H5S_select_is_regular
PURPOSE
Determines if a selection is "regular" in the dataspace
USAGE
htri_t H5S_select_is_regular(space)
const H5S_t *space; IN: Dataspace of selection to query
RETURNS
Non-negative (TRUE/FALSE) on success, negative on failure
DESCRIPTION
Checks the selection to determine if it is "regular" (i.e. a single
block or a strided pattern) in the particular dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
This routine participates in the "Inlining C function pointers"
pattern, don't call it directly, use the appropriate macro
defined in H5Sprivate.h.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
htri_t
H5S_select_is_regular(const H5S_t *space)
{
herr_t ret_value; /* return value */
FUNC_ENTER_NOAPI_NOFUNC(H5S_select_is_regular);
/* Check args */
assert(space);
ret_value = (*space->select.type->is_regular)(space);
FUNC_LEAVE_NOAPI(ret_value);
} /* H5S_select_is_regular() */
/*--------------------------------------------------------------------------
NAME
H5S_select_iter_init
PURPOSE
Initializes iteration information for a selection.
USAGE
herr_t H5S_select_iter_init(sel_iter, space, elmt_size)
H5S_sel_iter_t *sel_iter; OUT: Selection iterator to initialize.
H5S_t *space; IN: Dataspace object containing selection to
iterate over
size_t elmt_size; IN: Size of elements in the selection
RETURNS
Non-negative on success, negative on failure.
DESCRIPTION
Initialize the selection iterator object to point to the first element
in the dataspace's selection.
--------------------------------------------------------------------------*/
herr_t
H5S_select_iter_init(H5S_sel_iter_t *sel_iter, const H5S_t *space, size_t elmt_size)
{
herr_t ret_value; /* Return value */
FUNC_ENTER_NOAPI_NOFUNC(H5S_select_iter_init);
/* Check args */
assert(sel_iter);
assert(space);
/* Initialize common information */
/* Save the dataspace's rank */
sel_iter->rank=space->extent.rank;
if(sel_iter->rank>0) {
/* Point to the dataspace dimensions */
sel_iter->dims=space->extent.size;
} /* end if */
else
sel_iter->dims = NULL;
/* Save the element size */
sel_iter->elmt_size=elmt_size;
/* Call initialization routine for selection type */
ret_value= (*space->select.type->iter_init)(sel_iter, space);
FUNC_LEAVE_NOAPI(ret_value);
} /* H5S_select_iter_init() */
/*--------------------------------------------------------------------------
NAME
H5S_select_iter_coords
PURPOSE
Get the coordinates of the current iterator position
USAGE
herr_t H5S_select_iter_coords(sel_iter,coords)
H5S_sel_iter_t *sel_iter; IN: Selection iterator to query
hsize_t *coords; OUT: Array to place iterator coordinates in
RETURNS
Non-negative on success, negative on failure.
DESCRIPTION
The current location of the iterator within the selection is placed in
the COORDS array.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
This routine participates in the "Inlining C function pointers"
pattern, don't call it directly, use the appropriate macro
defined in H5Sprivate.h.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5S_select_iter_coords (const H5S_sel_iter_t *sel_iter, hsize_t *coords)
{
herr_t ret_value; /* return value */
FUNC_ENTER_NOAPI_NOFUNC(H5S_select_iter_coords);
/* Check args */
assert(sel_iter);
assert(coords);
/* Call iter_coords routine for selection type */
ret_value = (*sel_iter->type->iter_coords)(sel_iter,coords);
FUNC_LEAVE_NOAPI(ret_value);
} /* H5S_select_iter_coords() */
#ifdef LATER
/*--------------------------------------------------------------------------
NAME
H5S_select_iter_block
PURPOSE
Get the block of the current iterator position
USAGE
herr_t H5S_select_iter_block(sel_iter,start,end)
const H5S_sel_iter_t *sel_iter; IN: Selection iterator to query
hsize_t *start; OUT: Array to place iterator start block coordinates
hsize_t *end; OUT: Array to place iterator end block coordinates
RETURNS
Non-negative on success, negative on failure.
DESCRIPTION
The current location of the iterator within the selection is placed in
the COORDS array.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
This routine participates in the "Inlining C function pointers"
pattern, don't call it directly, use the appropriate macro
defined in H5Sprivate.h.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S_select_iter_block (const H5S_sel_iter_t *iter, hsize_t *start, hsize_t *end)
{
herr_t ret_value; /* return value */
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5S_select_iter_block);
/* Check args */
assert(iter);
assert(start);
assert(end);
/* Call iter_block routine for selection type */
ret_value = (*iter->type->iter_block)(iter,start,end);
FUNC_LEAVE_NOAPI(ret_value);
} /* H5S_select_iter_block() */
#endif /* LATER */
/*--------------------------------------------------------------------------
NAME
H5S_select_iter_nelmts
PURPOSE
Get the number of elements left to iterate over in selection
USAGE
hssize_t H5S_select_iter_nelmts(sel_iter)
H5S_sel_iter_t *sel_iter; IN: Selection iterator to query
RETURNS
The number of elements in selection on success, 0 on failure
DESCRIPTION
Returns the number of elements in current selection for dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
This routine participates in the "Inlining C function pointers"
pattern, don't call it directly, use the appropriate macro
defined in H5Sprivate.h.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
hsize_t
H5S_select_iter_nelmts (const H5S_sel_iter_t *sel_iter)
{
hsize_t ret_value; /* return value */
FUNC_ENTER_NOAPI_NOFUNC(H5S_select_iter_nelmts);
/* Check args */
assert(sel_iter);
/* Call iter_nelmts routine for selection type */
ret_value = (*sel_iter->type->iter_nelmts)(sel_iter);
FUNC_LEAVE_NOAPI(ret_value);
} /* H5S_select_iter_nelmts() */
#ifdef LATER
/*--------------------------------------------------------------------------
NAME
H5S_select_iter_has_next_block
PURPOSE
Check if there is another block available in the selection iterator
USAGE
htri_t H5S_select_iter_has_next_block(sel_iter)
const H5S_sel_iter_t *sel_iter; IN: Selection iterator to query
RETURNS
Non-negative on success, negative on failure.
DESCRIPTION
Check if there is another block available to advance to in the selection
iterator.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
This routine participates in the "Inlining C function pointers"
pattern, don't call it directly, use the appropriate macro
defined in H5Sprivate.h.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static htri_t
H5S_select_iter_has_next_block (const H5S_sel_iter_t *iter)
{
herr_t ret_value; /* return value */
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5S_select_iter_has_next_block);
/* Check args */
assert(iter);
/* Call iter_has_next_block routine for selection type */
ret_value = (*iter->type->iter_has_next_block)(iter);
FUNC_LEAVE_NOAPI(ret_value);
} /* H5S_select_iter_has_next_block() */
#endif /* LATER */
/*--------------------------------------------------------------------------
NAME
H5S_select_iter_next
PURPOSE
Advance selection iterator to next element
USAGE
herr_t H5S_select_iter_next(iter, nelem)
H5S_sel_iter_t *iter; IN/OUT: Selection iterator to change
size_t nelem; IN: Number of elements to advance by
RETURNS
Non-negative on success, negative on failure.
DESCRIPTION
Move the current element for the selection iterator to the NELEM'th next
element in the selection.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
This routine participates in the "Inlining C function pointers"
pattern, don't call it directly, use the appropriate macro
defined in H5Sprivate.h.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5S_select_iter_next(H5S_sel_iter_t *iter, size_t nelem)
{
herr_t ret_value; /* return value */
FUNC_ENTER_NOAPI_NOFUNC(H5S_select_iter_next);
/* Check args */
assert(iter);
assert(nelem>0);
/* Call iter_next routine for selection type */
ret_value = (*iter->type->iter_next)(iter,nelem);
/* Decrement the number of elements left in selection */
iter->elmt_left-=nelem;
FUNC_LEAVE_NOAPI(ret_value);
} /* H5S_select_iter_next() */
#ifdef LATER
/*--------------------------------------------------------------------------
NAME
H5S_select_iter_next_block
PURPOSE
Advance selection iterator to next block
USAGE
herr_t H5S_select_iter_next_block(iter)
H5S_sel_iter_t *iter; IN/OUT: Selection iterator to change
RETURNS
Non-negative on success, negative on failure.
DESCRIPTION
Move the current element for the selection iterator to the next
block in the selection.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
Doesn't maintain the 'elmt_left' field of the selection iterator.
This routine participates in the "Inlining C function pointers"
pattern, don't call it directly, use the appropriate macro
defined in H5Sprivate.h.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S_select_iter_next_block(H5S_sel_iter_t *iter)
{
herr_t ret_value; /* return value */
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5S_select_iter_next_block);
/* Check args */
assert(iter);
/* Call iter_next_block routine for selection type */
ret_value = (*iter->type->iter_next_block)(iter);
FUNC_LEAVE_NOAPI(ret_value);
} /* H5S_select_iter_next_block() */
#endif /* LATER */
/*--------------------------------------------------------------------------
NAME
H5S_select_iter_release
PURPOSE
Release a selection iterator's resources.
USAGE
hssize_t H5S_select_iter_release(sel_iter)
H5S_sel_iter_t *sel_iter; IN: Selection iterator to query
RETURNS
The number of elements in selection on success, 0 on failure
DESCRIPTION
Returns the number of elements in current selection for dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
This routine participates in the "Inlining C function pointers"
pattern, don't call it directly, use the appropriate macro
defined in H5Sprivate.h.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5S_select_iter_release(H5S_sel_iter_t *sel_iter)
{
herr_t ret_value; /* return value */
FUNC_ENTER_NOAPI_NOFUNC(H5S_select_iter_release);
/* Check args */
assert(sel_iter);
/* Call selection type-specific release routine */
ret_value = (*sel_iter->type->iter_release)(sel_iter);
FUNC_LEAVE_NOAPI(ret_value);
} /* H5S_select_iter_release() */
/*--------------------------------------------------------------------------
NAME
H5S_select_iterate
PURPOSE
Iterate over the selected elements in a memory buffer.
USAGE
herr_t H5S_select_iterate(buf, type_id, space, operator, operator_data)
void *buf; IN/OUT: Buffer containing elements to iterate over
hid_t type_id; IN: Datatype ID of BUF array.
H5S_t *space; IN: Dataspace object containing selection to iterate over
H5D_operator_t op; IN: Function pointer to the routine to be
called for each element in BUF iterated over.
void *operator_data; IN/OUT: Pointer to any user-defined data
associated with the operation.
RETURNS
Returns the return value of the last operator if it was non-zero, or zero
if all elements were processed. Otherwise returns a negative value.
DESCRIPTION
Iterates over the selected elements in a memory buffer, calling the user's
callback function for each element. The selection in the dataspace is
modified so that any elements already iterated over are removed from the
selection if the iteration is interrupted (by the H5D_operator_t function
returning non-zero) in the "middle" of the iteration and may be re-started
by the user where it left off.
NOTE: Until "subtracting" elements from a selection is implemented,
the selection is not modified.
--------------------------------------------------------------------------*/
herr_t
H5S_select_iterate(void *buf, hid_t type_id, const H5S_t *space, H5D_operator_t op,
void *operator_data)
{
H5T_t *dt; /* Datatype structure */
H5S_sel_iter_t iter; /* Selection iteration info */
hbool_t iter_init=0; /* Selection iteration info has been initialized */
uint8_t *loc; /* Current element location in buffer */
hsize_t coords[H5O_LAYOUT_NDIMS]; /* Coordinates of element in dataspace */
hssize_t nelmts; /* Number of elements in selection */
hsize_t space_size[H5O_LAYOUT_NDIMS]; /* Dataspace size */
hsize_t off[H5D_IO_VECTOR_SIZE]; /* Array to store sequence offsets */
hsize_t curr_off; /* Current offset within sequence */
hsize_t tmp_off; /* Temporary offset within sequence */
size_t len[H5D_IO_VECTOR_SIZE]; /* Array to store sequence lengths */
size_t curr_len; /* Length of bytes left to process in sequence */
size_t nseq; /* Number of sequences generated */
size_t curr_seq; /* Current sequnce being worked on */
size_t nelem; /* Number of elements used in sequences */
size_t max_elem; /* Maximum number of elements allowed in sequences */
size_t elmt_size; /* Datatype size */
unsigned ndims; /* Number of dimensions in dataspace */
int i; /* Local Index variable */
herr_t user_ret=0; /* User's return value */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5S_select_iterate, FAIL);
/* Check args */
assert(buf);
assert(H5I_DATATYPE == H5I_get_type(type_id));
assert(space);
assert(op);
/* Get the datatype size */
if (NULL==(dt=H5I_object_verify(type_id,H5I_DATATYPE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not an valid base datatype");
if((elmt_size=H5T_get_size(dt))==0)
HGOTO_ERROR(H5E_DATATYPE, H5E_BADSIZE, FAIL, "datatype size invalid");
/* Initialize iterator */
if (H5S_select_iter_init(&iter, space, elmt_size)<0)
HGOTO_ERROR (H5E_DATASPACE, H5E_CANTINIT, FAIL, "unable to initialize selection iterator");
iter_init=1; /* Selection iteration info has been initialized */
/* Get the number of elements in selection */
if((nelmts = H5S_GET_SELECT_NPOINTS(space))<0)
HGOTO_ERROR (H5E_DATASPACE, H5E_CANTCOUNT, FAIL, "can't get number of elements selected");
/* Get the rank of the dataspace */
ndims=space->extent.rank;
if (ndims > 0){
/* Copy the size of the space */
assert(space->extent.size);
HDmemcpy(space_size, space->extent.size, ndims*sizeof(hsize_t));
}
space_size[ndims]=elmt_size;
/* Compute the maximum number of bytes required */
H5_ASSIGN_OVERFLOW(max_elem,nelmts,hssize_t,size_t);
/* Loop, while elements left in selection */
while(max_elem>0 && user_ret==0) {
/* Get the sequences of bytes */
if(H5S_SELECT_GET_SEQ_LIST(space, 0, &iter, (size_t)H5D_IO_VECTOR_SIZE, max_elem, &nseq, &nelem, off, len) < 0)
HGOTO_ERROR (H5E_INTERNAL, H5E_UNSUPPORTED, FAIL, "sequence length generation failed");
/* Loop, while sequences left to process */
for(curr_seq=0; curr_seq<nseq && user_ret==0; curr_seq++) {
/* Get the current offset */
curr_off=off[curr_seq];
/* Get the number of bytes in sequence */
curr_len=len[curr_seq];
/* Loop, while bytes left in sequence */
while(curr_len>0 && user_ret==0) {
/* Compute the coordinate from the offset */
for(i=ndims, tmp_off=curr_off; i>=0; i--) {
coords[i]=tmp_off%space_size[i];
tmp_off/=space_size[i];
} /* end for */
/* Get the location within the user's buffer */
loc=(unsigned char *)buf+curr_off;
/* Call user's callback routine */
user_ret=(*op)(loc,type_id,ndims,coords,operator_data);
/* Increment offset in dataspace */
curr_off+=elmt_size;
/* Decrement number of bytes left in sequence */
curr_len-=elmt_size;
} /* end while */
} /* end for */
/* Decrement number of elements left to process */
max_elem-=nelem;
} /* end while */
/* Set return value */
ret_value=user_ret;
done:
/* Release selection iterator */
if(iter_init) {
if (H5S_SELECT_ITER_RELEASE(&iter)<0)
HDONE_ERROR (H5E_DATASPACE, H5E_CANTRELEASE, FAIL, "unable to release selection iterator");
} /* end if */
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5S_select_iterate() */
/*--------------------------------------------------------------------------
NAME
H5Sget_select_type
PURPOSE
Retrieve the type of selection in a dataspace
USAGE
H5S_sel_type H5Sget_select_type(space_id)
hid_t space_id; IN: Dataspace object to query
RETURNS
Non-negative on success/Negative on failure. Return value is from the
set of values in the H5S_sel_type enumerated type.
DESCRIPTION
This function retrieves the type of selection currently defined for
a dataspace.
--------------------------------------------------------------------------*/
H5S_sel_type
H5Sget_select_type(hid_t space_id)
{
H5S_t *space = NULL; /* dataspace to modify */
H5S_sel_type ret_value; /* Return value */
FUNC_ENTER_API(H5Sget_select_type, H5S_SEL_ERROR);
H5TRACE1("St", "i", space_id);
/* Check args */
if (NULL == (space = H5I_object_verify(space_id, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, H5S_SEL_ERROR, "not a dataspace");
/* Set return value */
ret_value=H5S_GET_SELECT_TYPE(space);
done:
FUNC_LEAVE_API(ret_value);
} /* end H5Sget_select_type() */
/*--------------------------------------------------------------------------
NAME
H5S_get_select_type
PURPOSE
Retrieve the type of selection in a dataspace
USAGE
H5S_sel_type H5Sget_select_type(space)
const H5S_t *space; IN: Dataspace object to query
RETURNS
Non-negative on success/Negative on failure. Return value is from the
set of values in the H5S_sel_type enumerated type.
DESCRIPTION
This function retrieves the type of selection currently defined for
a dataspace.
COMMENTS
This routine participates in the "Inlining C function pointers"
pattern, don't call it directly, use the appropriate macro
defined in H5Sprivate.h.
--------------------------------------------------------------------------*/
H5S_sel_type
H5S_get_select_type(const H5S_t *space)
{
H5S_sel_type ret_value; /* Return value */
FUNC_ENTER_NOAPI_NOFUNC(H5S_get_select_type);
/* Check args */
assert(space);
/* Set return value */
ret_value=H5S_GET_SELECT_TYPE(space);
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5S_get_select_type() */
/*--------------------------------------------------------------------------
NAME
H5S_select_shape_same
PURPOSE
Check if two selections are the same shape
USAGE
htri_t H5S_select_shape_same(space1, space2)
const H5S_t *space1; IN: 1st Dataspace pointer to compare
const H5S_t *space2; IN: 2nd Dataspace pointer to compare
RETURNS
TRUE/FALSE/FAIL
DESCRIPTION
Checks to see if the current selection in the dataspaces are the same
dimensionality and shape.
This is primarily used for reading the entire selection in one swoop.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
Assumes that there is only a single "block" for hyperslab selections.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
htri_t
H5S_select_shape_same(const H5S_t *space1, const H5S_t *space2)
{
H5S_sel_iter_t iter1; /* Selection #1 iteration info */
H5S_sel_iter_t iter2; /* Selection #2 iteration info */
hbool_t iter1_init=0; /* Selection #1 iteration info has been initialized */
hbool_t iter2_init=0; /* Selection #2 iteration info has been initialized */
unsigned u; /* Index variable */
htri_t ret_value=TRUE; /* return value */
FUNC_ENTER_NOAPI(H5S_select_shape_same, FAIL);
/* Check args */
assert(space1);
assert(space2);
/* Check for different dimensionality */
if (space1->extent.rank!=space2->extent.rank)
HGOTO_DONE(FALSE);
/* Check for different number of elements selected */
if(H5S_GET_SELECT_NPOINTS(space1)!=H5S_GET_SELECT_NPOINTS(space2))
HGOTO_DONE(FALSE);
/* Check for "easy" cases before getting into generalized block iteration code */
if(H5S_GET_SELECT_TYPE(space1)==H5S_SEL_ALL && H5S_GET_SELECT_TYPE(space2)==H5S_SEL_ALL) {
hsize_t dims1[H5O_LAYOUT_NDIMS]; /* End point of selection block in dataspace #1 */
hsize_t dims2[H5O_LAYOUT_NDIMS]; /* End point of selection block in dataspace #2 */
if(H5S_get_simple_extent_dims(space1, dims1, NULL)<0)
HGOTO_ERROR (H5E_DATASPACE, H5E_CANTGET, FAIL, "unable to get dimensionality");
if(H5S_get_simple_extent_dims(space2, dims2, NULL)<0)
HGOTO_ERROR (H5E_DATASPACE, H5E_CANTGET, FAIL, "unable to get dimensionality");
/* Check that the sizes are the same */
for (u=0; u<space1->extent.rank; u++)
if(dims1[u]!=dims2[u])
HGOTO_DONE(FALSE);
} /* end if */
else if(H5S_GET_SELECT_TYPE(space1)==H5S_SEL_NONE || H5S_GET_SELECT_TYPE(space2)==H5S_SEL_NONE) {
HGOTO_DONE(TRUE);
} /* end if */
else if((H5S_GET_SELECT_TYPE(space1)==H5S_SEL_HYPERSLABS && space1->select.sel_info.hslab->diminfo_valid)
&& (H5S_GET_SELECT_TYPE(space2)==H5S_SEL_HYPERSLABS && space2->select.sel_info.hslab->diminfo_valid)) {
/* Check that the shapes are the same */
for (u=0; u<space1->extent.rank; u++) {
if(space1->select.sel_info.hslab->opt_diminfo[u].stride!=space2->select.sel_info.hslab->opt_diminfo[u].stride)
HGOTO_DONE(FALSE);
if(space1->select.sel_info.hslab->opt_diminfo[u].count!=space2->select.sel_info.hslab->opt_diminfo[u].count)
HGOTO_DONE(FALSE);
if(space1->select.sel_info.hslab->opt_diminfo[u].block!=space2->select.sel_info.hslab->opt_diminfo[u].block)
HGOTO_DONE(FALSE);
} /* end for */
} /* end if */
/* Iterate through all the blocks in the selection */
else {
hsize_t start1[H5O_LAYOUT_NDIMS]; /* Start point of selection block in dataspace #1 */
hsize_t start2[H5O_LAYOUT_NDIMS]; /* Start point of selection block in dataspace #2 */
hsize_t end1[H5O_LAYOUT_NDIMS]; /* End point of selection block in dataspace #1 */
hsize_t end2[H5O_LAYOUT_NDIMS]; /* End point of selection block in dataspace #2 */
hsize_t off1[H5O_LAYOUT_NDIMS]; /* Offset of selection #1 blocks */
hsize_t off2[H5O_LAYOUT_NDIMS]; /* Offset of selection #2 blocks */
htri_t status1,status2; /* Status from next block checks */
unsigned first_block=1; /* Flag to indicate the first block */
/* Initialize iterator for each dataspace selection
* Use '0' for element size instead of actual element size to indicate
* that the selection iterator shouldn't be "flattened", since we
* aren't actually going to be doing I/O with the iterators.
*/
if(H5S_select_iter_init(&iter1, space1, (size_t)0) < 0)
HGOTO_ERROR (H5E_DATASPACE, H5E_CANTINIT, FAIL, "unable to initialize selection iterator");
iter1_init = 1;
if(H5S_select_iter_init(&iter2, space2, (size_t)0) < 0)
HGOTO_ERROR (H5E_DATASPACE, H5E_CANTINIT, FAIL, "unable to initialize selection iterator");
iter2_init = 1;
/* Iterate over all the blocks in each selection */
while(1) {
/* Get the current block for each selection iterator */
if(H5S_SELECT_ITER_BLOCK(&iter1,start1,end1)<0)
HGOTO_ERROR (H5E_DATASPACE, H5E_CANTGET, FAIL, "unable to get iterator block");
if(H5S_SELECT_ITER_BLOCK(&iter2,start2,end2)<0)
HGOTO_ERROR (H5E_DATASPACE, H5E_CANTGET, FAIL, "unable to get iterator block");
/* The first block only compares the sizes and sets the relative offsets for later blocks */
if(first_block) {
/* If the block sizes from each selection doesn't match, get out */
for (u=0; u<space1->extent.rank; u++) {
if((end1[u]-start1[u])!=(end2[u]-start2[u]))
HGOTO_DONE(FALSE);
/* Set the relative locations of the selections */
off1[u]=start1[u];
off2[u]=start2[u];
} /* end for */
/* Reset "first block" flag */
first_block=0;
} /* end if */
else {
/* Check over the blocks for each selection */
for (u=0; u<space1->extent.rank; u++) {
/* Check if the blocks are in the same relative location */
if((start1[u]-off1[u])!=(start2[u]-off2[u]))
HGOTO_DONE(FALSE);
/* If the block sizes from each selection doesn't match, get out */
if((end1[u]-start1[u])!=(end2[u]-start2[u]))
HGOTO_DONE(FALSE);
} /* end for */
} /* end else */
/* Check if we are able to advance to the next selection block */
if((status1=H5S_SELECT_ITER_HAS_NEXT_BLOCK(&iter1))<0)
HGOTO_ERROR (H5E_DATASPACE, H5E_CANTNEXT, FAIL, "unable to check iterator block");
if((status2=H5S_SELECT_ITER_HAS_NEXT_BLOCK(&iter2))<0)
HGOTO_ERROR (H5E_DATASPACE, H5E_CANTNEXT, FAIL, "unable to check iterator block");
/* Did we run out of blocks at the same time? */
if(status1==FALSE && status2==FALSE)
break;
else if(status1!=status2) {
HGOTO_DONE(FALSE);
} /* end if */
else {
/* Advance to next block in selection iterators */
if(H5S_SELECT_ITER_NEXT_BLOCK(&iter1)<0)
HGOTO_ERROR (H5E_DATASPACE, H5E_CANTNEXT, FAIL, "unable to advance to next iterator block");
if(H5S_SELECT_ITER_NEXT_BLOCK(&iter2)<0)
HGOTO_ERROR (H5E_DATASPACE, H5E_CANTNEXT, FAIL, "unable to advance to next iterator block");
} /* end else */
} /* end while */
} /* end else */
done:
if(iter1_init) {
if (H5S_SELECT_ITER_RELEASE(&iter1)<0)
HDONE_ERROR (H5E_DATASPACE, H5E_CANTRELEASE, FAIL, "unable to release selection iterator");
} /* end if */
if(iter2_init) {
if (H5S_SELECT_ITER_RELEASE(&iter2)<0)
HDONE_ERROR (H5E_DATASPACE, H5E_CANTRELEASE, FAIL, "unable to release selection iterator");
} /* end if */
FUNC_LEAVE_NOAPI(ret_value);
} /* H5S_select_shape_same() */
/*--------------------------------------------------------------------------
NAME
H5S_select_fill
PURPOSE
Fill a selection in memory with a value
USAGE
herr_t H5S_select_fill(fill,fill_size,space,buf)
const void *fill; IN: Pointer to fill value to use
size_t fill_size; IN: Size of elements in memory buffer & size of
fill value
H5S_t *space; IN: Dataspace describing memory buffer &
containing selection to use.
void *buf; IN/OUT: Memory buffer to fill selection in
RETURNS
Non-negative on success/Negative on failure.
DESCRIPTION
Use the selection in the dataspace to fill elements in a memory buffer.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
The memory buffer elements are assumed to have the same datatype as the
fill value being placed into them.
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5S_select_fill(const void *fill, size_t fill_size, const H5S_t *space, void *_buf)
{
H5S_sel_iter_t iter; /* Selection iteration info */
hbool_t iter_init = 0; /* Selection iteration info has been initialized */
hssize_t nelmts; /* Number of elements in selection */
size_t max_elem; /* Total number of elements in selection */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5S_select_fill, FAIL)
/* Check args */
HDassert(fill);
HDassert(fill_size > 0);
HDassert(space);
HDassert(_buf);
/* Initialize iterator */
if(H5S_select_iter_init(&iter, space, fill_size) < 0)
HGOTO_ERROR (H5E_DATASPACE, H5E_CANTINIT, FAIL, "unable to initialize selection iterator")
iter_init = 1; /* Selection iteration info has been initialized */
/* Get the number of elements in selection */
if((nelmts = H5S_GET_SELECT_NPOINTS(space)) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCOUNT, FAIL, "can't get number of elements selected")
/* Compute the number of bytes to process */
H5_ASSIGN_OVERFLOW(max_elem, nelmts, hssize_t, size_t);
/* Loop, while elements left in selection */
while(max_elem > 0) {
hsize_t off[H5D_IO_VECTOR_SIZE]; /* Array to store sequence offsets */
size_t len[H5D_IO_VECTOR_SIZE]; /* Array to store sequence lengths */
size_t nseq; /* Number of sequences generated */
size_t curr_seq; /* Current sequnce being worked on */
size_t nelem; /* Number of elements used in sequences */
/* Get the sequences of bytes */
if(H5S_SELECT_GET_SEQ_LIST(space, 0, &iter, (size_t)H5D_IO_VECTOR_SIZE, max_elem, &nseq, &nelem, off, len) < 0)
HGOTO_ERROR (H5E_INTERNAL, H5E_UNSUPPORTED, FAIL, "sequence length generation failed")
/* Loop over sequences */
for(curr_seq = 0; curr_seq < nseq; curr_seq++) {
uint8_t *buf; /* Current location in buffer */
/* Get offset in memory buffer */
buf = (uint8_t *)_buf + off[curr_seq];
/* Fill each sequence in memory with fill value */
HDassert((len[curr_seq] % fill_size) == 0);
H5V_array_fill(buf, fill, fill_size, (len[curr_seq] / fill_size));
} /* end for */
/* Decrement number of elements left to process */
max_elem -= nelem;
} /* end while */
done:
/* Release resouces */
if(iter_init && H5S_SELECT_ITER_RELEASE(&iter) < 0)
HDONE_ERROR(H5E_DATASPACE, H5E_CANTRELEASE, FAIL, "unable to release selection iterator")
FUNC_LEAVE_NOAPI(ret_value)
} /* H5S_select_fill() */
|