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|
/*
* Copyright (C) 1998 NCSA
* All rights reserved.
*
* Programmer: Quincey Koziol <koziol@ncsa.uiuc.ued>
* Friday, May 29, 1998
*
* Purpose: Dataspace functions.
*/
#include <H5private.h>
#include <H5Eprivate.h>
#include <H5FLprivate.h> /*Free Lists */
#include <H5Iprivate.h>
#include <H5MMprivate.h>
#include <H5Sprivate.h>
#include <H5Vprivate.h>
/* Interface initialization */
#define PABLO_MASK H5Sselect_mask
#define INTERFACE_INIT NULL
static intn interface_initialize_g = 0;
static hssize_t H5S_get_select_hyper_nblocks(H5S_t *space);
static hssize_t H5S_get_select_elem_npoints(H5S_t *space);
static herr_t H5S_get_select_hyper_blocklist(H5S_t *space, hsize_t startblock, hsize_t numblocks, hsize_t *buf);
static herr_t H5S_get_select_elem_pointlist(H5S_t *space, hsize_t startpoint, hsize_t numpoints, hsize_t *buf);
static herr_t H5S_get_select_bounds(H5S_t *space, hsize_t *start, hsize_t *end);
/* Declare external the free list for hssize_t arrays */
H5FL_ARR_EXTERN(hssize_t);
/*--------------------------------------------------------------------------
NAME
H5S_select_copy
PURPOSE
Copy a selection from one dataspace to another
USAGE
herr_t H5S_select_copy(dst, src)
H5S_t *dst; OUT: Pointer to the destination dataspace
H5S_t *src; IN: Pointer to the source dataspace
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Copies all the selection information (include offset) from the source
dataspace to the destination dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5S_select_copy (H5S_t *dst, const H5S_t *src)
{
herr_t ret_value=SUCCEED; /* return value */
FUNC_ENTER (H5S_select_copy, FAIL);
/* Check args */
assert(dst);
assert(src);
/* Copy regular fields */
dst->select=src->select;
/* Need to copy order information still */
/* Copy offset information */
if (NULL==(dst->select.offset = H5FL_ARR_ALLOC(hssize_t, src->extent.u.simple.rank,1))) {
HRETURN_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,
"memory allocation failed");
}
if(src->select.offset!=NULL)
HDmemcpy(dst->select.offset,src->select.offset,(src->extent.u.simple.rank*sizeof(hssize_t)));
/* Perform correct type of copy based on the type of selection */
switch (src->extent.type) {
case H5S_SCALAR:
/*nothing needed */
break;
case H5S_SIMPLE:
/* Deep copy extra stuff */
switch(src->select.type) {
case H5S_SEL_NONE:
case H5S_SEL_ALL:
/*nothing needed */
break;
case H5S_SEL_POINTS:
ret_value=H5S_point_copy(dst,src);
break;
case H5S_SEL_HYPERSLABS:
ret_value=H5S_hyper_copy(dst,src);
break;
default:
assert("unknown selection type" && 0);
break;
} /* end switch */
break;
case H5S_COMPLEX:
/*void */
break;
default:
assert("unknown data space type" && 0);
break;
}
FUNC_LEAVE (ret_value);
} /* H5S_select_copy() */
/*--------------------------------------------------------------------------
NAME
H5S_select_release
PURPOSE
Release selection information for a dataspace
USAGE
herr_t H5S_select_release(space)
H5S_t *space; IN: Pointer to dataspace
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Releases all selection information for a dataspace
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5S_select_release (H5S_t *space)
{
herr_t ret_value=SUCCEED; /* return value */
FUNC_ENTER (H5S_select_release, FAIL);
/* Check args */
assert (space);
switch(space->select.type) {
case H5S_SEL_POINTS: /* Sequence of points selected */
ret_value=H5S_point_release(space);
break;
case H5S_SEL_HYPERSLABS: /* Hyperslab selection defined */
ret_value=H5S_hyper_release(space);
break;
case H5S_SEL_ALL: /* Entire extent selected */
ret_value=H5S_all_release(space);
break;
case H5S_SEL_NONE: /* Nothing selected */
break;
case H5S_SEL_ERROR:
case H5S_SEL_N:
break;
}
/* Reset type of selection to "all" */
space->select.type=H5S_SEL_ALL;
FUNC_LEAVE (ret_value);
} /* H5S_select_release() */
/*--------------------------------------------------------------------------
NAME
H5Sget_select_npoints
PURPOSE
Get the number of elements in current selection
USAGE
hssize_t H5Sget_select_npoints(dsid)
hid_t dsid; IN: Dataspace ID of selection to query
RETURNS
The number of elements in selection on success, 0 on failure
DESCRIPTION
Returns the number of elements in current selection for dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
hssize_t
H5Sget_select_npoints(hid_t spaceid)
{
H5S_t *space = NULL; /* Dataspace to modify selection of */
hssize_t ret_value=FAIL; /* return value */
FUNC_ENTER (H5Sget_select_npoints, 0);
H5TRACE1("Hs","i",spaceid);
/* Check args */
if (H5I_DATASPACE != H5I_get_type(spaceid) ||
NULL == (space=H5I_object(spaceid))) {
HRETURN_ERROR(H5E_ARGS, H5E_BADTYPE, 0, "not a data space");
}
ret_value = H5S_get_select_npoints(space);
FUNC_LEAVE (ret_value);
} /* H5Sget_select_npoints() */
/*--------------------------------------------------------------------------
NAME
H5S_get_select_npoints
PURPOSE
Get the number of elements in current selection
USAGE
herr_t H5Sselect_hyperslab(ds)
H5S_t *ds; IN: Dataspace pointer
RETURNS
The number of elements in selection on success, 0 on failure
DESCRIPTION
Returns the number of elements in current selection for dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
hssize_t
H5S_get_select_npoints (const H5S_t *space)
{
hssize_t ret_value=FAIL; /* return value */
FUNC_ENTER (H5S_get_select_npoints, FAIL);
assert(space);
switch(space->select.type) {
case H5S_SEL_POINTS: /* Sequence of points selected */
ret_value=H5S_point_npoints(space);
break;
case H5S_SEL_HYPERSLABS: /* Hyperslab selection defined */
ret_value=H5S_hyper_npoints(space);
break;
case H5S_SEL_ALL: /* Entire extent selected */
ret_value=H5S_all_npoints(space);
break;
case H5S_SEL_NONE: /* Nothing selected */
ret_value=0;
break;
case H5S_SEL_ERROR:
case H5S_SEL_N:
break;
}
FUNC_LEAVE (ret_value);
} /* H5S_get_select_npoints() */
/*--------------------------------------------------------------------------
NAME
H5S_sel_iter_release
PURPOSE
Release selection iterator information for a dataspace
USAGE
herr_t H5S_sel_iter_release(sel_iter)
const H5S_t *space; IN: Pointer to dataspace iterator is for
H5S_sel_iter_t *sel_iter; IN: Pointer to selection iterator
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Releases all information for a dataspace selection iterator
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5S_sel_iter_release (const H5S_t *space, H5S_sel_iter_t *sel_iter)
{
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER (H5S_sel_iter_release, FAIL);
/* Check args */
assert (sel_iter);
switch(space->select.type) {
case H5S_SEL_POINTS: /* Sequence of points selected */
case H5S_SEL_ALL: /* Entire extent selected */
/* no action needed */
ret_value=SUCCEED;
break;
case H5S_SEL_HYPERSLABS: /* Hyperslab selection defined */
ret_value=H5S_hyper_sel_iter_release(sel_iter);
break;
case H5S_SEL_NONE: /* Nothing selected */
break;
case H5S_SEL_ERROR:
case H5S_SEL_N:
break;
}
FUNC_LEAVE (ret_value);
} /* H5S_sel_iter_release() */
/*--------------------------------------------------------------------------
NAME
H5Sselect_valid
PURPOSE
Check whether the selection fits within the extent, with the current
offset defined.
USAGE
htri_t H5Sselect_void(dsid)
hid_t dsid; IN: Dataspace ID to query
RETURNS
TRUE if the selection fits within the extent, FALSE if it does not and
Negative on an error.
DESCRIPTION
Determines if the current selection at the current offet fits within the
extent for the dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
htri_t
H5Sselect_valid(hid_t spaceid)
{
H5S_t *space = NULL; /* Dataspace to modify selection of */
htri_t ret_value=FAIL; /* return value */
FUNC_ENTER (H5Sselect_valid, 0);
H5TRACE1("b","i",spaceid);
/* Check args */
if (H5I_DATASPACE != H5I_get_type(spaceid) ||
NULL == (space=H5I_object(spaceid))) {
HRETURN_ERROR(H5E_ARGS, H5E_BADTYPE, 0, "not a data space");
}
ret_value = H5S_select_valid(space);
FUNC_LEAVE (ret_value);
} /* H5Sselect_valid() */
/*--------------------------------------------------------------------------
NAME
H5S_select_valid
PURPOSE
Check whether the selection fits within the extent, with the current
offset defined.
USAGE
htri_t H5Sselect_void(space)
H5S_t *space; IN: Dataspace pointer to query
RETURNS
TRUE if the selection fits within the extent, FALSE if it does not and
Negative on an error.
DESCRIPTION
Determines if the current selection at the current offet fits within the
extent for the dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
htri_t
H5S_select_valid (const H5S_t *space)
{
htri_t ret_value=FAIL; /* return value */
FUNC_ENTER (H5S_select_valid, FAIL);
assert(space);
switch(space->select.type) {
case H5S_SEL_POINTS: /* Sequence of points selected */
ret_value=H5S_point_select_valid(space);
break;
case H5S_SEL_HYPERSLABS: /* Hyperslab selection defined */
ret_value=H5S_hyper_select_valid(space);
break;
case H5S_SEL_ALL: /* Entire extent selected */
case H5S_SEL_NONE: /* Nothing selected */
ret_value=TRUE;
break;
case H5S_SEL_ERROR:
case H5S_SEL_N:
break;
}
FUNC_LEAVE (ret_value);
} /* H5S_select_valid() */
/*--------------------------------------------------------------------------
NAME
H5S_select_serial_size
PURPOSE
Determine the number of bytes needed to serialize the current selection
offset defined.
USAGE
hssize_t H5S_select_serial_size(space)
H5S_t *space; IN: Dataspace pointer to query
RETURNS
The number of bytes required on success, negative on an error.
DESCRIPTION
Determines the number of bytes required to serialize the current selection
information for storage on disk. This routine just hands off to the
appropriate routine for each type of selection.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
hssize_t
H5S_select_serial_size (const H5S_t *space)
{
hssize_t ret_value=FAIL; /* return value */
FUNC_ENTER (H5S_select_serial_size, FAIL);
assert(space);
switch(space->select.type) {
case H5S_SEL_POINTS: /* Sequence of points selected */
ret_value=H5S_point_select_serial_size(space);
break;
case H5S_SEL_HYPERSLABS: /* Hyperslab selection defined */
ret_value=H5S_hyper_select_serial_size(space);
break;
case H5S_SEL_ALL: /* Entire extent selected */
case H5S_SEL_NONE: /* Nothing selected */
ret_value=16; /* replace with real function call at some point */
break;
case H5S_SEL_ERROR:
case H5S_SEL_N:
break;
}
FUNC_LEAVE (ret_value);
} /* H5S_select_serial_size() */
/*--------------------------------------------------------------------------
NAME
H5S_select_serialize
PURPOSE
Serialize the current selection into a user-provided buffer.
USAGE
herr_t H5S_select_serialize(space, buf)
H5S_t *space; IN: Dataspace pointer of selection to serialize
uint8 *buf; OUT: Buffer to put serialized selection into
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Serializes the current selection into a buffer. (Primarily for storing
on disk). This routine just hands off to the appropriate routine for each
type of selection.
The serialized information for all types of selections follows this format:
<type of selection> = uint32
<version #> = uint32
<padding, not-used> = 4 bytes
<length of selection specific information> = uint32
<selection specific information> = ? bytes (depends on selection type)
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5S_select_serialize (const H5S_t *space, uint8_t *buf)
{
herr_t ret_value=FAIL; /* return value */
FUNC_ENTER (H5S_select_serialize, FAIL);
assert(space);
switch(space->select.type) {
case H5S_SEL_POINTS: /* Sequence of points selected */
ret_value=H5S_point_select_serialize(space,buf);
break;
case H5S_SEL_HYPERSLABS: /* Hyperslab selection defined */
ret_value=H5S_hyper_select_serialize(space,buf);
break;
case H5S_SEL_ALL: /* Entire extent selected */
ret_value=H5S_all_select_serialize(space,buf);
break;
case H5S_SEL_NONE: /* Nothing selected */
ret_value=H5S_none_select_serialize(space,buf);
break;
case H5S_SEL_ERROR:
case H5S_SEL_N:
break;
}
FUNC_LEAVE (ret_value);
} /* H5S_select_serialize() */
/*--------------------------------------------------------------------------
NAME
H5S_select_deserialize
PURPOSE
Deserialize the current selection from a user-provided buffer into a real
selection in the dataspace.
USAGE
herr_t H5S_select_deserialize(space, buf)
H5S_t *space; IN/OUT: Dataspace pointer to place selection into
uint8 *buf; IN: Buffer to retrieve serialized selection from
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Deserializes the current selection into a buffer. (Primarily for retrieving
from disk). This routine just hands off to the appropriate routine for each
type of selection. The format of the serialized information is shown in
the H5S_select_serialize() header.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5S_select_deserialize (H5S_t *space, const uint8_t *buf)
{
const uint8_t *tbuf; /* Temporary pointer to the selection type */
uint32_t sel_type; /* Pointer to the selection type */
herr_t ret_value=FAIL; /* return value */
FUNC_ENTER (H5S_select_deserialize, FAIL);
assert(space);
tbuf=buf;
UINT32DECODE(tbuf, sel_type);
switch(sel_type) {
case H5S_SEL_POINTS: /* Sequence of points selected */
ret_value=H5S_point_select_deserialize(space,buf);
break;
case H5S_SEL_HYPERSLABS: /* Hyperslab selection defined */
ret_value=H5S_hyper_select_deserialize(space,buf);
break;
case H5S_SEL_ALL: /* Entire extent selected */
ret_value=H5S_all_select_deserialize(space,buf);
break;
case H5S_SEL_NONE: /* Nothing selected */
ret_value=H5S_none_select_deserialize(space,buf);
break;
case H5S_SEL_ERROR:
case H5S_SEL_N:
break;
}
FUNC_LEAVE (ret_value);
} /* H5S_select_deserialize() */
/*--------------------------------------------------------------------------
NAME
H5S_get_select_hyper_nblocks
PURPOSE
Get the number of hyperslab blocks in current hyperslab selection
USAGE
hssize_t H5S_get_select_hyper_nblocks(space)
H5S_t *space; IN: Dataspace ptr of selection to query
RETURNS
The number of hyperslab blocks in selection on success, negative on failure
DESCRIPTION
Returns the number of hyperslab blocks in current selection for dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static hssize_t
H5S_get_select_hyper_nblocks(H5S_t *space)
{
hssize_t ret_value=FAIL; /* return value */
intn i; /* Counter */
FUNC_ENTER (H5S_get_select_hyper_nblocks, FAIL);
assert(space);
/* Check for a "regular" hyperslab selection */
if(space->select.sel_info.hslab.diminfo != NULL) {
#ifdef QAK
{
H5S_hyper_dim_t *diminfo=space->select.sel_info.hslab.diminfo;
for(i=0; i<space->extent.u.simple.rank; i++)
printf("%s: (%d) start=%d, stride=%d, count=%d, block=%d\n",FUNC,i,(int)diminfo[i].start,(int)diminfo[i].stride,(int)diminfo[i].count,(int)diminfo[i].block);
}
#endif /*QAK */
/* Check each dimension */
for(ret_value=1,i=0; i<space->extent.u.simple.rank; i++)
ret_value*=space->select.sel_info.hslab.diminfo[i].count;
} /* end if */
else
ret_value = (hssize_t)space->select.sel_info.hslab.hyper_lst->count;
FUNC_LEAVE (ret_value);
} /* H5Sget_select_hyper_nblocks() */
/*--------------------------------------------------------------------------
NAME
H5Sget_select_hyper_nblocks
PURPOSE
Get the number of hyperslab blocks in current hyperslab selection
USAGE
hssize_t H5Sget_select_hyper_nblocks(dsid)
hid_t dsid; IN: Dataspace ID of selection to query
RETURNS
The number of hyperslab blocks in selection on success, negative on failure
DESCRIPTION
Returns the number of hyperslab blocks in current selection for dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
hssize_t
H5Sget_select_hyper_nblocks(hid_t spaceid)
{
H5S_t *space = NULL; /* Dataspace to modify selection of */
hssize_t ret_value=FAIL; /* return value */
FUNC_ENTER (H5Sget_select_hyper_nblocks, FAIL);
H5TRACE1("Hs","i",spaceid);
/* Check args */
if (H5I_DATASPACE != H5I_get_type(spaceid) ||
NULL == (space=H5I_object(spaceid))) {
HRETURN_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a data space");
}
if(space->select.type!=H5S_SEL_HYPERSLABS)
HRETURN_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a hyperslab selection");
ret_value = H5S_get_select_hyper_nblocks(space);
FUNC_LEAVE (ret_value);
} /* H5Sget_select_hyper_nblocks() */
/*--------------------------------------------------------------------------
NAME
H5S_get_select_elem_npoints
PURPOSE
Get the number of points in current element selection
USAGE
hssize_t H5S_get_select_elem_npoints(space)
H5S_t *space; IN: Dataspace ptr of selection to query
RETURNS
The number of element points in selection on success, negative on failure
DESCRIPTION
Returns the number of element points in current selection for dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static hssize_t
H5S_get_select_elem_npoints(H5S_t *space)
{
hssize_t ret_value=FAIL; /* return value */
FUNC_ENTER (H5S_get_select_elem_npoints, FAIL);
assert(space);
ret_value = space->select.num_elem;
FUNC_LEAVE (ret_value);
} /* H5Sget_select_elem_npoints() */
/*--------------------------------------------------------------------------
NAME
H5Sget_select_elem_npoints
PURPOSE
Get the number of points in current element selection
USAGE
hssize_t H5Sget_select_elem_npoints(dsid)
hid_t dsid; IN: Dataspace ID of selection to query
RETURNS
The number of element points in selection on success, negative on failure
DESCRIPTION
Returns the number of element points in current selection for dataspace.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
hssize_t
H5Sget_select_elem_npoints(hid_t spaceid)
{
H5S_t *space = NULL; /* Dataspace to modify selection of */
hssize_t ret_value=FAIL; /* return value */
FUNC_ENTER (H5Sget_select_elem_npoints, FAIL);
H5TRACE1("Hs","i",spaceid);
/* Check args */
if (H5I_DATASPACE != H5I_get_type(spaceid) ||
NULL == (space=H5I_object(spaceid))) {
HRETURN_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a data space");
}
if(space->select.type!=H5S_SEL_POINTS)
HRETURN_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not an element selection");
ret_value = H5S_get_select_elem_npoints(space);
FUNC_LEAVE (ret_value);
} /* H5Sget_select_elem_npoints() */
/*--------------------------------------------------------------------------
NAME
H5S_get_select_hyper_blocklist
PURPOSE
Get the list of hyperslab blocks currently selected
USAGE
herr_t H5S_get_select_hyper_blocklist(space, hsize_t *buf)
H5S_t *space; IN: Dataspace pointer of selection to query
hsize_t startblock; IN: Hyperslab block to start with
hsize_t numblocks; IN: Number of hyperslab blocks to get
hsize_t *buf; OUT: List of hyperslab blocks selected
RETURNS
Non-negative on success, negative on failure
DESCRIPTION
Puts a list of the hyperslab blocks into the user's buffer. The blocks
start with the 'startblock'th block in the list of blocks and put
'numblocks' number of blocks into the user's buffer (or until the end of
the list of blocks, whichever happen first)
The block coordinates have the same dimensionality (rank) as the
dataspace they are located within. The list of blocks is formatted as
follows: <"start" coordinate> immediately followed by <"opposite" corner
coordinate>, followed by the next "start" and "opposite" coordinate, etc.
until all the block information requested has been put into the user's
buffer.
No guarantee of any order of the blocks is implied.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S_get_select_hyper_blocklist(H5S_t *space, hsize_t startblock, hsize_t numblocks, hsize_t *buf)
{
H5S_hyper_dim_t *diminfo; /* Alias for dataspace's diminfo information */
hsize_t tmp_count[H5O_LAYOUT_NDIMS]; /* Temporary hyperslab counts */
hssize_t offset[H5O_LAYOUT_NDIMS]; /* Offset of element in dataspace */
size_t temp_off; /* Offset in a given dimension */
H5S_hyper_node_t *node; /* Hyperslab node */
intn rank; /* Dataspace rank */
intn i; /* Counter */
intn fast_dim; /* Rank of the fastest changing dimension for the dataspace */
intn temp_dim; /* Temporary rank holder */
intn ndims; /* Rank of the dataspace */
intn done; /* Whether we are done with the iteration */
herr_t ret_value=SUCCEED; /* return value */
FUNC_ENTER (H5S_get_select_hyper_blocklist, FAIL);
assert(space);
assert(buf);
/* Get the dataspace extent rank */
rank=space->extent.u.simple.rank;
/* Check for a "regular" hyperslab selection */
if(space->select.sel_info.hslab.diminfo != NULL) {
/* Set some convienence values */
ndims=space->extent.u.simple.rank;
fast_dim=ndims-1;
diminfo=space->select.sel_info.hslab.diminfo;
/* Build the tables of count sizes as well as the initial offset */
for(i=0; i<ndims; i++) {
tmp_count[i]=diminfo[i].count;
offset[i]=diminfo[i].start;
} /* end for */
/* We're not done with the iteration */
done=0;
/* Go iterate over the hyperslabs */
while(done==0 && numblocks>0) {
/* Iterate over the blocks in the fastest dimension */
while(tmp_count[fast_dim]>0 && numblocks>0) {
/* Check if we should copy this block information */
if(startblock==0) {
/* Copy the starting location */
HDmemcpy(buf,offset,sizeof(hsize_t)*ndims);
buf+=ndims;
/* Compute the ending location */
HDmemcpy(buf,offset,sizeof(hsize_t)*ndims);
for(i=0; i<ndims; i++)
buf[i]+=(diminfo[i].block-1);
buf+=ndims;
/* Decrement the number of blocks to retrieve */
numblocks--;
} /* end if */
else
startblock--;
/* Move the offset to the next sequence to start */
offset[fast_dim]+=diminfo[fast_dim].stride;
/* Decrement the block count */
tmp_count[fast_dim]--;
} /* end while */
/* Work on other dimensions if necessary */
if(fast_dim>0 && numblocks>0) {
/* Reset the block counts */
tmp_count[fast_dim]=diminfo[fast_dim].count;
/* Bubble up the decrement to the slower changing dimensions */
temp_dim=fast_dim-1;
while(temp_dim>=0 && done==0) {
/* Decrement the block count */
tmp_count[temp_dim]--;
/* Check if we have more blocks left */
if(tmp_count[temp_dim]>0)
break;
/* Check for getting out of iterator */
if(temp_dim==0)
done=1;
/* Reset the block count in this dimension */
tmp_count[temp_dim]=diminfo[temp_dim].count;
/* Wrapped a dimension, go up to next dimension */
temp_dim--;
} /* end while */
} /* end if */
/* Re-compute offset array */
for(i=0; i<ndims; i++) {
temp_off=diminfo[i].start
+diminfo[i].stride*(diminfo[i].count-tmp_count[i]);
offset[i]=temp_off;
} /* end for */
} /* end while */
} /* end if */
else {
/* Get the head of the hyperslab list */
node=space->select.sel_info.hslab.hyper_lst->head;
/* Get to the correct first node to give back to the user */
while(node!=NULL && startblock>0) {
startblock--;
node=node->next;
} /* end while */
/* Iterate through the node, copying each hyperslab's information */
while(node!=NULL && numblocks>0) {
HDmemcpy(buf,node->start,sizeof(hsize_t)*rank);
buf+=rank;
HDmemcpy(buf,node->end,sizeof(hsize_t)*rank);
buf+=rank;
numblocks--;
node=node->next;
} /* end while */
} /* end else */
FUNC_LEAVE (ret_value);
} /* H5Sget_select_hyper_blocklist() */
/*--------------------------------------------------------------------------
NAME
H5Sget_select_hyper_blocklist
PURPOSE
Get the list of hyperslab blocks currently selected
USAGE
herr_t H5Sget_select_hyper_blocklist(dsid, hsize_t *buf)
hid_t dsid; IN: Dataspace ID of selection to query
hsize_t startblock; IN: Hyperslab block to start with
hsize_t numblocks; IN: Number of hyperslab blocks to get
hsize_t *buf; OUT: List of hyperslab blocks selected
RETURNS
Non-negative on success, negative on failure
DESCRIPTION
Puts a list of the hyperslab blocks into the user's buffer. The blocks
start with the 'startblock'th block in the list of blocks and put
'numblocks' number of blocks into the user's buffer (or until the end of
the list of blocks, whichever happen first)
The block coordinates have the same dimensionality (rank) as the
dataspace they are located within. The list of blocks is formatted as
follows: <"start" coordinate> immediately followed by <"opposite" corner
coordinate>, followed by the next "start" and "opposite" coordinate, etc.
until all the block information requested has been put into the user's
buffer.
No guarantee of any order of the blocks is implied.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5Sget_select_hyper_blocklist(hid_t spaceid, hsize_t startblock, hsize_t numblocks, hsize_t *buf)
{
H5S_t *space = NULL; /* Dataspace to modify selection of */
herr_t ret_value=FAIL; /* return value */
FUNC_ENTER (H5Sget_select_hyper_blocklist, FAIL);
H5TRACE4("e","ihh*h",spaceid,startblock,numblocks,buf);
/* Check args */
if(buf==NULL)
HRETURN_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid pointer");
if (H5I_DATASPACE != H5I_get_type(spaceid) ||
NULL == (space=H5I_object(spaceid))) {
HRETURN_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a data space");
}
if(space->select.type!=H5S_SEL_HYPERSLABS)
HRETURN_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a hyperslab selection");
ret_value = H5S_get_select_hyper_blocklist(space,startblock,numblocks,buf);
FUNC_LEAVE (ret_value);
} /* H5Sget_select_hyper_blocklist() */
/*--------------------------------------------------------------------------
NAME
H5S_get_select_elem_pointlist
PURPOSE
Get the list of element points currently selected
USAGE
herr_t H5S_get_select_elem_pointlist(space, hsize_t *buf)
H5S_t *space; IN: Dataspace pointer of selection to query
hsize_t startpoint; IN: Element point to start with
hsize_t numpoints; IN: Number of element points to get
hsize_t *buf; OUT: List of element points selected
RETURNS
Non-negative on success, negative on failure
DESCRIPTION
Puts a list of the element points into the user's buffer. The points
start with the 'startpoint'th block in the list of points and put
'numpoints' number of points into the user's buffer (or until the end of
the list of points, whichever happen first)
The point coordinates have the same dimensionality (rank) as the
dataspace they are located within. The list of points is formatted as
follows: <coordinate> followed by the next coordinate, etc. until all the
point information in the selection have been put into the user's buffer.
The points are returned in the order they will be interated through
when a selection is read/written from/to disk.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S_get_select_elem_pointlist(H5S_t *space, hsize_t startpoint, hsize_t numpoints, hsize_t *buf)
{
H5S_pnt_node_t *node; /* Point node */
intn rank; /* Dataspace rank */
herr_t ret_value=SUCCEED; /* return value */
FUNC_ENTER (H5S_get_select_elem_pointlist, FAIL);
assert(space);
assert(buf);
/* Get the dataspace extent rank */
rank=space->extent.u.simple.rank;
/* Get the head of the point list */
node=space->select.sel_info.pnt_lst->head;
/* Iterate to the first point to return */
while(node!=NULL && startpoint>0) {
startpoint--;
node=node->next;
} /* end while */
/* Iterate through the node, copying each hyperslab's information */
while(node!=NULL && numpoints>0) {
HDmemcpy(buf,node->pnt,sizeof(hsize_t)*rank);
buf+=rank;
numpoints--;
node=node->next;
} /* end while */
FUNC_LEAVE (ret_value);
} /* H5Sget_select_elem_pointlist() */
/*--------------------------------------------------------------------------
NAME
H5Sget_select_elem_pointlist
PURPOSE
Get the list of element points currently selected
USAGE
herr_t H5Sget_select_elem_pointlist(dsid, hsize_t *buf)
hid_t dsid; IN: Dataspace ID of selection to query
hsize_t startpoint; IN: Element point to start with
hsize_t numpoints; IN: Number of element points to get
hsize_t *buf; OUT: List of element points selected
RETURNS
Non-negative on success, negative on failure
DESCRIPTION
Puts a list of the element points into the user's buffer. The points
start with the 'startpoint'th block in the list of points and put
'numpoints' number of points into the user's buffer (or until the end of
the list of points, whichever happen first)
The point coordinates have the same dimensionality (rank) as the
dataspace they are located within. The list of points is formatted as
follows: <coordinate> followed by the next coordinate, etc. until all the
point information in the selection have been put into the user's buffer.
The points are returned in the order they will be interated through
when a selection is read/written from/to disk.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5Sget_select_elem_pointlist(hid_t spaceid, hsize_t startpoint, hsize_t numpoints, hsize_t *buf)
{
H5S_t *space = NULL; /* Dataspace to modify selection of */
herr_t ret_value=FAIL; /* return value */
FUNC_ENTER (H5Sget_select_elem_pointlist, FAIL);
H5TRACE4("e","ihh*h",spaceid,startpoint,numpoints,buf);
/* Check args */
if(buf==NULL)
HRETURN_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid pointer");
if (H5I_DATASPACE != H5I_get_type(spaceid) ||
NULL == (space=H5I_object(spaceid))) {
HRETURN_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a data space");
}
if(space->select.type!=H5S_SEL_POINTS)
HRETURN_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a point selection");
ret_value = H5S_get_select_elem_pointlist(space,startpoint,numpoints,buf);
FUNC_LEAVE (ret_value);
} /* H5Sget_select_elem_pointlist() */
/*--------------------------------------------------------------------------
NAME
H5S_get_select_bounds
PURPOSE
Gets the bounding box containing the selection.
USAGE
herr_t H5S_get_select_bounds(space, hsize_t *start, hsize_t *end)
H5S_t *space; IN: Dataspace pointer of selection to query
hsize_t *start; OUT: Starting coordinate of bounding box
hsize_t *end; OUT: Opposite coordinate of bounding box
RETURNS
Non-negative on success, negative on failure
DESCRIPTION
Retrieves the bounding box containing the current selection and places
it into the user's buffers. The start and end buffers must be large
enough to hold the dataspace rank number of coordinates. The bounding box
exactly contains the selection, ie. if a 2-D element selection is currently
defined with the following points: (4,5), (6,8) (10,7), the bounding box
with be (4, 5), (10, 8). Calling this function on a "none" selection
returns fail.
The bounding box calculations _does_ include the current offset of the
selection within the dataspace extent.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
H5S_get_select_bounds(H5S_t *space, hsize_t *start, hsize_t *end)
{
intn rank; /* Dataspace rank */
intn i; /* index variable */
herr_t ret_value=FAIL; /* return value */
FUNC_ENTER (H5S_get_select_bounds, FAIL);
assert(space);
assert(start);
assert(end);
/* Set all the start and end arrays up */
rank=space->extent.u.simple.rank;
for(i=0; i<rank; i++) {
start[i]=UINT_MAX;
end[i]=0;
} /* end for */
switch(space->select.type) {
case H5S_SEL_POINTS: /* Sequence of points selected */
ret_value=H5S_point_bounds(space,start,end);
break;
case H5S_SEL_HYPERSLABS: /* Hyperslab selection defined */
ret_value=H5S_hyper_bounds(space,start,end);
break;
case H5S_SEL_ALL: /* Entire extent selected */
ret_value=H5S_all_bounds(space,start,end);
break;
case H5S_SEL_NONE: /* Nothing selected */
case H5S_SEL_ERROR:
case H5S_SEL_N:
break;
}
FUNC_LEAVE (ret_value);
} /* H5S_get_select_bounds() */
/*--------------------------------------------------------------------------
NAME
H5Sget_select_bounds
PURPOSE
Gets the bounding box containing the selection.
USAGE
herr_t H5S_get_select_bounds(space, start, end)
hid_t dsid; IN: Dataspace ID of selection to query
hsize_t *start; OUT: Starting coordinate of bounding box
hsize_t *end; OUT: Opposite coordinate of bounding box
RETURNS
Non-negative on success, negative on failure
DESCRIPTION
Retrieves the bounding box containing the current selection and places
it into the user's buffers. The start and end buffers must be large
enough to hold the dataspace rank number of coordinates. The bounding box
exactly contains the selection, ie. if a 2-D element selection is currently
defined with the following points: (4,5), (6,8) (10,7), the bounding box
with be (4, 5), (10, 8). Calling this function on a "none" selection
returns fail.
The bounding box calculations _does_ include the current offset of the
selection within the dataspace extent.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
H5Sget_select_bounds(hid_t spaceid, hsize_t *start, hsize_t *end)
{
H5S_t *space = NULL; /* Dataspace to modify selection of */
herr_t ret_value=FAIL; /* return value */
FUNC_ENTER (H5Sget_select_bounds, FAIL);
H5TRACE3("e","i*h*h",spaceid,start,end);
/* Check args */
if(start==NULL || end==NULL)
HRETURN_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid pointer");
if (H5I_DATASPACE != H5I_get_type(spaceid) ||
NULL == (space=H5I_object(spaceid))) {
HRETURN_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a data space");
}
ret_value = H5S_get_select_bounds(space,start,end);
FUNC_LEAVE (ret_value);
} /* H5Sget_select_bounds() */
/*--------------------------------------------------------------------------
NAME
H5S_select_contiguous
PURPOSE
Check if the selection is contiguous within the dataspace extent.
USAGE
htri_t H5S_select_contiguous(space)
H5S_t *space; IN: Dataspace pointer to check
RETURNS
TRUE/FALSE/FAIL
DESCRIPTION
Checks to see if the current selection in the dataspace is contiguous.
This is primarily used for reading the entire selection in one swoop.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
htri_t
H5S_select_contiguous(const H5S_t *space)
{
htri_t ret_value=FAIL; /* return value */
FUNC_ENTER (H5S_select_contiguous, FAIL);
assert(space);
switch(space->select.type) {
case H5S_SEL_POINTS: /* Sequence of points selected */
ret_value=H5S_point_select_contiguous(space);
break;
case H5S_SEL_HYPERSLABS: /* Hyperslab selection defined */
ret_value=H5S_hyper_select_contiguous(space);
break;
case H5S_SEL_ALL: /* Entire extent selected */
ret_value=TRUE;
break;
case H5S_SEL_NONE: /* Nothing selected */
ret_value=FALSE;
break;
case H5S_SEL_ERROR:
case H5S_SEL_N:
break;
}
FUNC_LEAVE (ret_value);
} /* H5S_select_contiguous() */
/*--------------------------------------------------------------------------
NAME
H5S_iterate
PURPOSE
Iterate over the selected elements in a memory buffer.
USAGE
herr_t H5S_select_iterate(buf, type_id, space, operator, operator_data)
void *buf; IN/OUT: Buffer containing elements to iterate over
hid_t type_id; IN: Datatype ID of BUF array.
H5S_t *space; IN: Dataspace object containing selection to iterate over
H5D_operator_t op; IN: Function pointer to the routine to be
called for each element in BUF iterated over.
void *operator_data; IN/OUT: Pointer to any user-defined data
associated with the operation.
RETURNS
Returns the return value of the last operator if it was non-zero, or zero
if all elements were processed. Otherwise returns a negative value.
DESCRIPTION
Iterates over the selected elements in a memory buffer, calling the user's
callback function for each element. The selection in the dataspace is
modified so that any elements already iterated over are removed from the
selection if the iteration is interrupted (by the H5D_operator_t function
returning non-zero) in the "middle" of the iteration and may be re-started
by the user where it left off.
NOTE: Until "subtracting" elements from a selection is implemented,
the selection is not modified.
--------------------------------------------------------------------------*/
herr_t
H5S_select_iterate(void *buf, hid_t type_id, H5S_t *space, H5D_operator_t op,
void *operator_data)
{
herr_t ret_value=FAIL;
FUNC_ENTER(H5S_select_iterate, FAIL);
/* Check args */
assert(buf);
assert(space);
assert(op);
assert(H5I_DATATYPE == H5I_get_type(type_id));
switch(space->select.type) {
case H5S_SEL_POINTS: /* Sequence of points selected */
ret_value=H5S_point_select_iterate(buf,type_id,space,op,operator_data);
break;
case H5S_SEL_HYPERSLABS: /* Hyperslab selection defined */
ret_value=H5S_hyper_select_iterate(buf,type_id,space,op,operator_data);
break;
case H5S_SEL_ALL: /* Entire extent selected */
ret_value=H5S_all_select_iterate(buf,type_id,space,op,operator_data);
break;
case H5S_SEL_NONE: /* Nothing selected */
ret_value=H5S_none_select_iterate(buf,type_id,space,op,operator_data);
break;
case H5S_SEL_ERROR:
case H5S_SEL_N:
break;
}
FUNC_LEAVE(ret_value);
} /* end H5S_select_iterate() */
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