1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
|
/*
* Copyright (C) 1998-2001 NCSA
* All rights reserved.
*
* Programmer: Robb Matzke <matzke@llnl.gov>
* Friday, October 30, 1998
*
* Purpose: This file is included by all HDF5 library source files to
* define common things which are not defined in the HDF5 API.
* The configuration constants like H5_HAVE_UNISTD_H etc. are
* defined in H5config.h which is included by H5public.h.
*
*/
#ifndef _H5private_H
#define _H5private_H
#include "H5public.h" /* Include Public Definitions */
/*
* Since H5config.h is a generated header file, it is messy to try
* to put a #ifndef _H5config_H ... #endif guard in it.
* HDF5 has set an internal rule that it is being included here.
* Source files should NOT include H5config.h directly but include
* it via H5private.h. The #ifndef _H5private_H guard above would
* prevent repeated include.
*/
#include "H5config.h" /* Include all configuration info */
/* include the pthread library */
#ifdef H5_HAVE_THREADSAFE
#include <pthread.h>
#endif
/*
* Include ANSI-C header files.
*/
#ifdef H5_STDC_HEADERS
# include <assert.h>
# include <ctype.h>
# include <errno.h>
# include <fcntl.h>
# include <float.h>
# include <limits.h>
# include <math.h>
# include <signal.h>
# include <stdarg.h>
# include <stdio.h>
# include <stdlib.h>
# include <string.h>
#endif
/*
* If _POSIX_VERSION is defined in unistd.h then this system is Posix.1
* compliant. Otherwise all bets are off.
*/
#ifdef H5_HAVE_UNISTD_H
# include <sys/types.h>
# include <unistd.h>
#endif
#ifdef _POSIX_VERSION
# include <sys/wait.h>
# include <pwd.h>
#endif
/*
* C9x integer types
*/
#ifdef H5_HAVE_STDINT_H
# include <stdint.h>
#endif
/*
* The `struct stat' data type for stat() and fstat(). This is a Posix file
* but often apears on non-Posix systems also. The `struct stat' is required
* for hdf5 to compile, although only a few fields are actually used.
*/
#ifdef H5_HAVE_SYS_STAT_H
# include <sys/stat.h>
#endif
/*
* If a program may include both `time.h' and `sys/time.h' then
* TIME_WITH_SYS_TIME is defined (see AC_HEADER_TIME in configure.in).
* On some older systems, `sys/time.h' includes `time.h' but `time.h' is not
* protected against multiple inclusion, so programs should not explicitly
* include both files. This macro is useful in programs that use, for example,
* `struct timeval' or `struct timezone' as well as `struct tm'. It is best
* used in conjunction with `HAVE_SYS_TIME_H', whose existence is checked
* by `AC_CHECK_HEADERS(sys/time.h)' in configure.in.
*/
#if defined(H5_TIME_WITH_SYS_TIME)
# include <sys/time.h>
# include <time.h>
#elif defined(H5_HAVE_SYS_TIME_H)
# include <sys/time.h>
#else
# include <time.h>
#endif
/*
* Longjumps are used to detect alignment constrants
*/
#ifdef H5_HAVE_SETJMP_H
# include <setjmp.h>
#endif
/*
* Resource usage is not Posix.1 but HDF5 uses it anyway for some performance
* and debugging code if available.
*/
#ifdef H5_HAVE_SYS_RESOURCE_H
# include <sys/resource.h>
#endif
/*
* Unix ioctls. These are used by h5ls (and perhaps others) to determine a
* resonable output width.
*/
#ifdef H5_HAVE_SYS_IOCTL_H
# include <sys/ioctl.h>
#endif
/*
* System information. These are needed on the DEC Alpha to turn off fixing
* of unaligned accesses by the operating system during detection of
* alignment constraints in H5detect.c:main().
*/
#ifdef H5_HAVE_SYS_SYSINFO_H
# include <sys/sysinfo.h>
#endif
#ifdef H5_HAVE_SYS_PROC_H
# include <sys/proc.h>
#endif
#ifdef WIN32
/*
* we need this from <windows.h>
* HDF5 is currently supported on _X86_
* including <windows.h> has the side effect of introducing thousands of Windows GUI
* macros and type declarations to the compilation environment, so we don't include it
* pvn
*/
#if !defined(_68K_) && !defined(_MPPC_) && !defined(_PPC_) && !defined(_ALPHA_) && !defined(_MIPS_) && !defined(_X86_) && defined(_M_IX86)
#define _X86_
#endif
#include <windef.h>
#include <winbase.h>
/* H5_inline */
/* remove any previous defs made by configure in unix */
#ifdef H5_inline
# undef H5_inline
#endif
/*
syntax:
inline function_declarator; // C++ Specific
__inline function_declarator; // Microsoft Specific
The inline and __inline keywords allow the compiler to insert a copy of
the function body into each place the function is called
inline is now in C but in the C99 standard and not the old C89 version so
MS doesn't recognize it yet (as of April 2001)
*/
#if defined(__MWERKS__) || defined(__cplusplus)
# define H5_inline inline
# else
# define H5_inline
#endif /*__MWERKS__*/
/* Metroworks <sys/types.h> doesn't define off_t. */
#ifdef __MWERKS__
typedef long off_t;
/* Metroworks does not define EINTR in <errno.h> */
# define EINTR 4
#endif /*__MWERKS__*/
#endif /*WIN32*/
#ifndef F_OK
# define F_OK 00
# define W_OK 02
# define R_OK 04
#endif
/*
* Pablo support files.
*/
#ifdef H5_HAVE_PABLO
# define IOTRACE
# define HDFIOTRACE
# include "HDFIOTrace.h"
# include "ProcIDs.h"
#endif
/*
* NT doesn't define SIGBUS, but since NT only runs on processors
* that do not have alignment constraints a SIGBUS would never be
* raised, so we just replace it with SIGILL (which also should
* never be raised by the hdf5 library).
*/
#ifndef SIGBUS
# define SIGBUS SIGILL
#endif
/*
* Does the compiler support the __attribute__(()) syntax? This is how gcc
* suppresses warnings about unused function arguments. It's no big deal if
* we don't.
*/
#ifdef H5_HAVE_ATTRIBUTE
# define UNUSED __attribute__((unused))
#else
# define __attribute__(X) /*void*/
# define UNUSED /*void*/
#endif
/*
* Does the compiler expand __FUNCTION__ to be the name of the function
* currently being defined? If not then define it to be some constant
* string.
*/
#ifndef H5_HAVE_FUNCTION
# define __FUNCTION__ "NoFunctionName"
#endif
/* Version #'s of the major components of the file format */
#define HDF5_BOOTBLOCK_VERSION 0 /* of the boot block format */
#define HDF5_FREESPACE_VERSION 0 /* of the Free-Space Info */
#define HDF5_OBJECTDIR_VERSION 0 /* of the Object Directory format */
#define HDF5_SHAREDHEADER_VERSION 0 /* of the Shared-Header Info */
#define HDF5_DRIVERINFO_VERSION 0 /* of the Driver Information Block*/
/*
* Status return values for the `herr_t' type.
* Since some unix/c routines use 0 and -1 (or more precisely, non-negative
* vs. negative) as their return code, and some assumption had been made in
* the code about that, it is important to keep these constants the same
* values. When checking the success or failure of an integer-valued
* function, remember to compare against zero and not one of these two
* values.
*/
#define SUCCEED 0
#define FAIL (-1)
#define UFAIL (unsigned)(-1)
/* number of members in an array */
#ifndef NELMTS
# define NELMTS(X) (sizeof(X)/sizeof(X[0]))
#endif
/* minimum of two, three, or four values */
#undef MIN
#define MIN(a,b) (((a)<(b)) ? (a) : (b))
#define MIN2(a,b) MIN(a,b)
#define MIN3(a,b,c) MIN(a,MIN(b,c))
#define MIN4(a,b,c,d) MIN(MIN(a,b),MIN(c,d))
/* maximum of two, three, or four values */
#undef MAX
#define MAX(a,b) (((a)>(b)) ? (a) : (b))
#define MAX2(a,b) MAX(a,b)
#define MAX3(a,b,c) MAX(a,MAX(b,c))
#define MAX4(a,b,c,d) MAX(MAX(a,b),MAX(c,d))
/* limit the middle value to be within a range (inclusive) */
#define RANGE(LO,X,HI) MAX(LO,MIN(X,HI))
/* absolute value */
#ifndef ABS
# define ABS(a) (((a)>=0) ? (a) : -(a))
#endif
/* sign of argument */
#ifndef SIGN
# define SIGN(a) ((a)>0 ? 1 : (a)<0 ? -1 : 0)
#endif
/*
* HDF Boolean type.
*/
#ifndef FALSE
# define FALSE 0
#endif
#ifndef TRUE
# define TRUE (!FALSE)
#endif
/*
* Although `long long' is part of the revised ANSI-C some compilers don't
* support it yet. We define `long_long' as the longest integral integer type
* supported by the compiler, usually 64 bits. It must be legal to qualify
* `long_long' with `unsigned'.
*/
#if SIZEOF_LONG_LONG>0
# define long_long long long
#elif SIZEOF___INT64>0
# define long_long __int64 /*Win32*/
# undef SIZEOF_LONG_LONG
# define SIZEOF_LONG_LONG SIZEOF___INT64
#else
# define long_long long int
# undef SIZEOF_LONG_LONG
# define SIZEOF_LONG_LONG SIZEOF_LONG
#endif
/*
* Numeric data types. Some of these might be defined in Posix.1g, otherwise
* we define them with the closest available type which is at least as large
* as the number of bits indicated in the type name. The `int8' types *must*
* be exactly one byte wide because we use it for pointer calculations to
* void* memory.
*/
#if SIZEOF_INT8_T==0
typedef signed char int8_t;
# undef SIZEOF_INT8_T
# define SIZEOF_INT8_T SIZEOF_CHAR
#elif SIZEOF_INT8_T==1
#else
# error "the int8_t type must be 1 byte wide"
#endif
#if SIZEOF_UINT8_T==0
typedef unsigned char uint8_t;
# undef SIZEOF_UINT8_T
# define SIZEOF_UINT8_T SIZEOF_CHAR
#elif SIZEOF_UINT8_T==1
#else
# error "the uint8_t type must be 1 byte wide"
#endif
#if SIZEOF_INT16_T>=2
#elif SIZEOF_SHORT>=2
typedef short int16_t;
# undef SIZEOF_INT16_T
# define SIZEOF_INT16_T SIZEOF_SHORT
#elif SIZEOF_INT>=2
typedef int int16_t;
# undef SIZEOF_INT16_T
# define SIZEOF_INT16_T SIZEOF_INT
#else
# error "nothing appropriate for int16_t"
#endif
#if SIZEOF_UINT16_T>=2
#elif SIZEOF_SHORT>=2
typedef unsigned short uint16_t;
# undef SIZEOF_UINT16_T
# define SIZEOF_UINT16_T SIZEOF_SHORT
#elif SIZEOF_INT>=2
typedef unsigned uint16_t;
# undef SIZEOF_UINT16_T
# define SIZEOF_UINT16_T SIZEOF_INT
#else
# error "nothing appropriate for uint16_t"
#endif
#if SIZEOF_INT32_T>=4
#elif SIZEOF_SHORT>=4
typedef short int32_t;
# undef SIZEOF_INT32_T
# define SIZEOF_INT32_T SIZEOF_SHORT
#elif SIZEOF_INT>=4
typedef int int32_t;
# undef SIZEOF_INT32_T
# define SIZEOF_INT32_T SIZEOF_INT
#elif SIZEOF_LONG>=4
typedef long int32_t;
# undef SIZEOF_INT32_T
# define SIZEOF_INT32_T SIZEOF_LONG
#else
# error "nothing appropriate for int32_t"
#endif
#if SIZEOF_UINT32_T>=4
#elif SIZEOF_SHORT>=4
typedef short uint32_t;
# undef SIZEOF_UINT32_T
# define SIZEOF_UINT32_T SIZEOF_SHORT
#elif SIZEOF_INT>=4
typedef unsigned int uint32_t;
# undef SIZEOF_UINT32_T
# define SIZEOF_UINT32_T SIZEOF_INT
#elif SIZEOF_LONG>=4
typedef unsigned long uint32_t;
# undef SIZEOF_UINT32_T
# define SIZEOF_UINT32_T SIZEOF_LONG
#else
# error "nothing appropriate for uint32_t"
#endif
#if SIZEOF_INT64_T>=8
#elif SIZEOF_INT>=8
typedef int int64_t;
# undef SIZEOF_INT64_T
# define SIZEOF_INT64_T SIZEOF_INT
#elif SIZEOF_LONG>=8
typedef long int64_t;
# undef SIZEOF_INT64_T
# define SIZEOF_INT64_T SIZEOF_LONG
#elif SIZEOF_LONG_LONG>=8
typedef long_long int64_t;
# undef SIZEOF_INT64_T
# define SIZEOF_INT64_T SIZEOF_LONG_LONG
#else
# error "nothing appropriate for int64_t"
#endif
#if SIZEOF_UINT64_T>=8
#elif SIZEOF_INT>=8
typedef unsigned uint64_t;
# undef SIZEOF_UINT64_T
# define SIZEOF_UINT64_T SIZEOF_INT
#elif SIZEOF_LONG>=8
typedef unsigned long uint64_t;
# undef SIZEOF_UINT64_T
# define SIZEOF_UINT64_T SIZEOF_LONG
#elif SIZEOF_LONG_LONG>=8
typedef unsigned long_long uint64_t;
# undef SIZEOF_UINT64_T
# define SIZEOF_UINT64_T SIZEOF_LONG_LONG
#else
# error "nothing appropriate for uint64_t"
#endif
/*
* Define a type for generic integers. Use this instead of `int' to
* show that some thought went into the algorithm.
*/
typedef int intn;
typedef unsigned uintn;
/*
* Maximum and minimum values. These should be defined in <limits.h> for the
* most part.
*/
#ifndef LLONG_MAX
# define LLONG_MAX ((long_long)(((unsigned long_long)1 \
<<(8*sizeof(long_long)-1))-1))
# define ULLONG_MAX ((unsigned long_long)((long_long)(-1)))
#endif
#ifndef SIZET_MAX
# define SIZET_MAX ((hsize_t)(size_t)(ssize_t)(-1))
# define SSIZET_MAX ((hsize_t)(ssize_t)((size_t)1<<(8*sizeof(ssize_t)-1)))
#endif
#define HSIZET_MAX ((hsize_t)(hssize_t)(-1))
#define HSSIZET_MAX ((hsize_t)1<<(8*sizeof(hssize_t)-1))
/*
* Some compilers have problems declaring auto variables that point
* to string constants. Use the CONSTR() macro so it's easy to fix
* those compilers.
*/
#ifndef CONSTR
# define CONSTR(VAR,STR) static const char VAR[]=STR
#endif
/*
* A macro for detecting over/under-flow when casting between types
*/
#ifndef NDEBUG
#define H5_CHECK_OVERFLOW(var,vartype,casttype) \
{ \
casttype _tmp_overflow=(casttype)(var); \
assert((var)==(vartype)_tmp_overflow); \
}
#else /* NDEBUG */
#define H5_CHECK_OVERFLOW(var,vartype,casttype)
#endif /* NDEBUG */
/*
* Data types and functions for timing certain parts of the library.
*/
typedef struct {
double utime; /*user time */
double stime; /*system time */
double etime; /*elapsed wall-clock time */
} H5_timer_t;
__DLL__ void H5_timer_reset (H5_timer_t *timer);
__DLL__ void H5_timer_begin (H5_timer_t *timer);
__DLL__ void H5_timer_end (H5_timer_t *sum/*in,out*/,
H5_timer_t *timer/*in,out*/);
__DLL__ void H5_bandwidth(char *buf/*out*/, double nbytes, double nseconds);
/*
* Redefine all the POSIX functions. We should never see a POSIX
* function (or any other non-HDF5 function) in the source!
*/
#define HDabort() abort()
#define HDabs(X) abs(X)
#define HDaccess(F,M) access(F, M)
#define HDacos(X) acos(X)
#define HDalarm(N) alarm(N)
#define HDasctime(T) asctime(T)
#define HDasin(X) asin(X)
#define HDassert(X) assert(X)
#define HDatan(X) atan(X)
#define HDatan2(X,Y) atan2(X,Y)
#define HDatexit(F) atexit(F)
#define HDatof(S) atof(S)
#define HDatoi(S) atoi(S)
#define HDatol(S) atol(S)
#define HDbsearch(K,B,N,Z,F) bsearch(K,B,N,Z,F)
#define HDcalloc(N,Z) calloc(N,Z)
#define HDceil(X) ceil(X)
#define HDcfgetispeed(T) cfgetispeed(T)
#define HDcfgetospeed(T) cfgetospeed(T)
#define HDcfsetispeed(T,S) cfsetispeed(T,S)
#define HDcfsetospeed(T,S) cfsetospeed(T,S)
#define HDchdir(S) chdir(S)
#define HDchmod(S,M) chmod(S,M)
#define HDchown(S,O,G) chown(S,O,G)
#define HDclearerr(F) clearerr(F)
#define HDclock() clock()
#define HDclose(F) close(F)
#define HDclosedir(D) closedir(D)
#define HDcos(X) cos(X)
#define HDcosh(X) cosh(X)
#define HDcreat(S,M) creat(S,M)
#define HDctermid(S) ctermid(S)
#define HDctime(T) ctime(T)
#define HDcuserid(S) cuserid(S)
#ifdef H5_HAVE_DIFFTIME
#define HDdifftime(X,Y) difftime(X,Y)
#else
#define HDdifftime(X,Y) ((double)(X)-(double)(Y))
#endif
#define HDdiv(X,Y) div(X,Y)
#define HDdup(F) dup(F)
#define HDdup2(F,I) dup2(F,I)
/* execl() variable arguments */
/* execle() variable arguments */
/* execlp() variable arguments */
#define HDexecv(S,AV) execv(S,AV)
#define HDexecve(S,AV,E) execve(S,AV,E)
#define HDexecvp(S,AV) execvp(S,AV)
#define HDexit(N) exit(N)
#define HD_exit(N) _exit(N)
#define HDexp(X) exp(X)
#define HDfabs(X) fabs(X)
#define HDfclose(F) fclose(F)
/* fcntl() variable arguments */
#define HDfdopen(N,S) fdopen(N,S)
#define HDfeof(F) feof(F)
#define HDferror(F) ferror(F)
#define HDfflush(F) fflush(F)
#define HDfgetc(F) fgetc(F)
#define HDfgetpos(F,P) fgetpos(F,P)
#define HDfgets(S,N,F) fgets(S,N,F)
#define HDfileno(F) fileno(F)
#define HDfloor(X) floor(X)
#define HDfmod(X,Y) fmod(X,Y)
#define HDfopen(S,M) fopen(S,M)
#define HDfork() fork()
#define HDfpathconf(F,N) fpathconf(F,N)
__DLL__ int HDfprintf (FILE *stream, const char *fmt, ...);
#define HDfputc(C,F) fputc(C,F)
#define HDfputs(S,F) fputs(S,F)
#define HDfread(M,Z,N,F) fread(M,Z,N,F)
#define HDfree(M) free(M)
#define HDfreopen(S,M,F) freopen(S,M,F)
#define HDfrexp(X,N) frexp(X,N)
/* fscanf() variable arguments */
#define HDfseek(F,O,W) fseek(F,O,W)
#define HDfsetpos(F,P) fsetpos(F,P)
#define HDfstat(F,B) fstat(F,B)
#define HDftell(F) ftell(F)
#define HDfwrite(M,Z,N,F) fwrite(M,Z,N,F)
#define HDgetc(F) getc(F)
#define HDgetchar() getchar()
#define HDgetcwd(S,Z) getcwd(S,Z)
#define HDgetegid() getegid()
#define HDgetenv(S) getenv(S)
#define HDgeteuid() geteuid()
#define HDgetgid() getgid()
#define HDgetgrgid(G) getgrgid(G)
#define HDgetgrnam(S) getgrnam(S)
#define HDgetgroups(Z,G) getgroups(Z,G)
#define HDgetlogin() getlogin()
#define HDgetpgrp() getpgrp()
#define HDgetpid() getpid()
#define HDgetppid() getppid()
#define HDgetpwnam(S) getpwnam(S)
#define HDgetpwuid(U) getpwuid(U)
#define HDgetrusage(X,S) getrusage(X,S)
#define HDgets(S) gets(S)
#define HDgettimeofday(S,P) gettimeofday(S,P)
#define HDgetuid() getuid()
#define HDgmtime(T) gmtime(T)
#define HDisalnum(C) isalnum((int)(C)) /*cast for solaris warning*/
#define HDisalpha(C) isalpha((int)(C)) /*cast for solaris warning*/
#define HDisatty(F) isatty(F)
#define HDiscntrl(C) iscntrl((int)(C)) /*cast for solaris warning*/
#define HDisdigit(C) isdigit((int)(C)) /*cast for solaris warning*/
#define HDisgraph(C) isgraph((int)(C)) /*cast for solaris warning*/
#define HDislower(C) islower((int)(C)) /*cast for solaris warning*/
#define HDisprint(C) isprint((int)(C)) /*cast for solaris warning*/
#define HDispunct(C) ispunct((int)(C)) /*cast for solaris warning*/
#define HDisspace(C) isspace((int)(C)) /*cast for solaris warning*/
#define HDisupper(C) isupper((int)(C)) /*cast for solaris warning*/
#define HDisxdigit(C) isxdigit((int)(C)) /*cast for solaris warning*/
#define HDkill(P,S) kill(P,S)
#define HDlabs(X) labs(X)
#define HDldexp(X,N) ldexp(X,N)
#define HDldiv(X,Y) ldiv(X,Y)
#define HDlink(OLD,NEW) link(OLD,NEW)
#define HDlocaleconv() localeconv()
#define HDlocaltime(T) localtime(T)
#define HDlog(X) log(X)
#define HDlog10(X) log10(X)
#define HDlongjmp(J,N) longjmp(J,N)
#define HDlseek(F,O,W) lseek(F,O,W)
#define HDmalloc(Z) malloc(Z)
#define HDmblen(S,N) mblen(S,N)
#define HDmbstowcs(P,S,Z) mbstowcs(P,S,Z)
#define HDmbtowc(P,S,Z) mbtowc(P,S,Z)
#define HDmemchr(S,C,Z) memchr(S,C,Z)
#define HDmemcmp(X,Y,Z) memcmp(X,Y,Z)
/*
* The (char*) casts are required for the DEC when optimizations are turned
* on and the source and/or destination are not aligned.
*/
#define HDmemcpy(X,Y,Z) memcpy((char*)(X),(const char*)(Y),Z)
#define HDmemmove(X,Y,Z) memmove((char*)(X),(const char*)(Y),Z)
#define HDmemset(X,C,Z) memset(X,C,Z)
#define HDmkdir(S,M) mkdir(S,M)
#define HDmkfifo(S,M) mkfifo(S,M)
#define HDmktime(T) mktime(T)
#define HDmodf(X,Y) modf(X,Y)
#ifdef O_BINARY
#define HDopen(S,F,M) open(S,F|_O_BINARY,M)
#else
#define HDopen(S,F,M) open(S,F,M)
#endif
#define HDopendir(S) opendir(S)
#define HDpathconf(S,N) pathconf(S,N)
#define HDpause() pause()
#define HDperror(S) perror(S)
#define HDpipe(F) pipe(F)
#define HDpow(X,Y) pow(X,Y)
/* printf() variable arguments */
#define HDputc(C,F) putc(C,F)
#define HDputchar(C) putchar(C)
#define HDputs(S) puts(S)
#define HDqsort(M,N,Z,F) qsort(M,N,Z,F)
#define HDraise(N) raise(N)
#define HDrand() rand()
#define HDread(F,M,Z) read(F,M,Z)
#define HDreaddir(D) readdir(D)
#define HDrealloc(M,Z) realloc(M,Z)
#define HDremove(S) remove(S)
#define HDrename(OLD,NEW) rename(OLD,NEW)
#define HDrewind(F) rewind(F)
#define HDrewinddir(D) rewinddir(D)
#define HDrmdir(S) rmdir(S)
/* scanf() variable arguments */
#define HDsetbuf(F,S) setbuf(F,S)
#define HDsetgid(G) setgid(G)
#define HDsetjmp(J) setjmp(J)
#define HDsetlocale(N,S) setlocale(N,S)
#define HDsetpgid(P,PG) setpgid(P,PG)
#define HDsetsid() setsid()
#define HDsetuid(U) setuid(U)
#define HDsetvbuf(F,S,M,Z) setvbuf(F,S,M,Z)
#define HDsigaction(N,A) sigaction(N,A)
#define HDsigaddset(S,N) sigaddset(S,N)
#define HDsigdelset(S,N) sigdelset(S,N)
#define HDsigemptyset(S) sigemptyset(S)
#define HDsigfillset(S) sigfillset(S)
#define HDsigismember(S,N) sigismember(S,N)
#define HDsiglongjmp(J,N) siglongjmp(J,N)
#define HDsignal(N,F) signal(N,F)
#define HDsigpending(S) sigpending(S)
#define HDsigprocmask(H,S,O) sigprocmask(H,S,O)
#define HDsigsetjmp(J,N) sigsetjmp(J,N)
#define HDsigsuspend(S) sigsuspend(S)
#define HDsin(X) sin(X)
#define HDsinh(X) sinh(X)
#define HDsleep(N) sleep(N)
#ifdef H5_HAVE_SNPRINTF
#ifdef __WATCOMC__
# define HDsnprintf _snprintf /*varargs*/
#else /* __WATCOMC__ */
# define HDsnprintf snprintf /*varargs*/
#endif /* __WATCOMC__ */
#endif
/* sprintf() variable arguments */
#define HDsqrt(X) sqrt(X)
#define HDsrand(N) srand(N)
/* sscanf() variable arguments */
#define HDstat(S,B) stat(S,B)
#define HDstrcat(X,Y) strcat(X,Y)
#define HDstrchr(S,C) strchr(S,C)
#define HDstrcmp(X,Y) strcmp(X,Y)
#define HDstrcoll(X,Y) strcoll(X,Y)
#define HDstrcpy(X,Y) strcpy(X,Y)
#define HDstrcspn(X,Y) strcspn(X,Y)
#define HDstrerror(N) strerror(N)
#define HDstrftime(S,Z,F,T) strftime(S,Z,F,T)
#define HDstrlen(S) strlen(S)
#define HDstrncat(X,Y,Z) strncat(X,Y,Z)
#define HDstrncmp(X,Y,Z) strncmp(X,Y,Z)
#define HDstrncpy(X,Y,Z) strncpy(X,Y,Z)
#define HDstrpbrk(X,Y) strpbrk(X,Y)
#define HDstrrchr(S,C) strrchr(S,C)
#define HDstrspn(X,Y) strspn(X,Y)
#define HDstrstr(X,Y) strstr(X,Y)
#define HDstrtod(S,R) strtod(S,R)
#define HDstrtok(X,Y) strtok(X,Y)
#define HDstrtol(S,R,N) strtol(S,R,N)
__DLL__ int64_t HDstrtoll (const char *s, const char **rest, int base);
#define HDstrtoul(S,R,N) strtoul(S,R,N)
#define HDstrxfrm(X,Y,Z) strxfrm(X,Y,Z)
#define HDsysconf(N) sysconf(N)
#define HDsystem(S) system(S)
#define HDtan(X) tan(X)
#define HDtanh(X) tanh(X)
#define HDtcdrain(F) tcdrain(F)
#define HDtcflow(F,A) tcflow(F,A)
#define HDtcflush(F,N) tcflush(F,N)
#define HDtcgetattr(F,T) tcgetattr(F,T)
#define HDtcgetpgrp(F) tcgetpgrp(F)
#define HDtcsendbreak(F,N) tcsendbreak(F,N)
#define HDtcsetattr(F,O,T) tcsetattr(F,O,T)
#define HDtcsetpgrp(F,N) tcsetpgrp(F,N)
#define HDtime(T) time(T)
#define HDtimes(T) times(T)
#define HDtmpfile() tmpfile()
#define HDtmpnam(S) tmpnam(S)
#define HDtolower(C) tolower(C)
#define HDtoupper(C) toupper(C)
#define HDttyname(F) ttyname(F)
#define HDtzset() tzset()
#define HDumask(N) umask(N)
#define HDuname(S) uname(S)
#define HDungetc(C,F) ungetc(C,F)
#define HDunlink(S) unlink(S)
#define HDutime(S,T) utime(S,T)
#define HDva_arg(A,T) va_arg(A,T)
#define HDva_end(A) va_end(A)
#define HDva_start(A,P) va_start(A,P)
#define HDvfprintf(F,FMT,A) vfprintf(F,FMT,A)
#define HDvprintf(FMT,A) vprintf(FMT,A)
#define HDvsprintf(S,FMT,A) vsprintf(S,FMT,A)
#ifdef H5_HAVE_VSNPRINTF
# define HDvsnprintf(S,N,FMT,A) vsnprintf(S,N,FMT,A)
#endif
#define HDwait(W) wait(W)
#define HDwaitpid(P,W,O) waitpid(P,W,O)
#define HDwcstombs(S,P,Z) wcstombs(S,P,Z)
#define HDwctomb(S,C) wctomb(S,C)
#define HDwrite(F,M,Z) write(F,M,Z)
/*
* And now for a couple non-Posix functions... Watch out for systems that
* define these in terms of macros.
*/
#ifdef WIN32
#define HDstrdup(S) _strdup(S)
#else /* WIN32 */
#if !defined strdup && !defined H5_HAVE_STRDUP
extern char *strdup(const char *s);
#endif
#define HDstrdup(S) strdup(S)
#endif /* WIN32 */
#ifndef H5_HAVE_SNPRINTF
__DLL__ int HDsnprintf(char *buf, size_t size, const char *fmt, ...);
#endif
#ifndef H5_HAVE_VSNPRINTF
__DLL__ int HDvsnprintf(char *buf, size_t size, const char *fmt, va_list ap);
#endif
/*
* These macros check whether debugging has been requested for a certain
* package at run-time. Code for debugging is conditionally compiled by
* defining constants like `H5X_DEBUG'. In order to see the output though
* the code must be enabled at run-time with an environment variable
* HDF5_DEBUG which is a list of packages to debug.
*
* Note: If you add/remove items from this enum then be sure to update the
* information about the package in H5_init_library().
*/
typedef enum {
H5_PKG_A, /*Attributes */
H5_PKG_AC, /*Meta data cache */
H5_PKG_B, /*B-trees */
H5_PKG_D, /*Datasets */
H5_PKG_E, /*Error handling */
H5_PKG_F, /*Files */
H5_PKG_G, /*Groups */
H5_PKG_HG, /*Global heap */
H5_PKG_HL, /*Local heap */
H5_PKG_I, /*Interface */
H5_PKG_MF, /*File memory management */
H5_PKG_MM, /*Core memory management */
H5_PKG_O, /*Object headers */
H5_PKG_P, /*Property lists */
H5_PKG_S, /*Data spaces */
H5_PKG_T, /*Data types */
H5_PKG_V, /*Vector functions */
H5_PKG_Z, /*Raw data filters */
H5_NPKGS /*Must be last */
} H5_pkg_t;
typedef struct H5_debug_t {
FILE *trace; /*API trace output stream */
struct {
const char *name; /*package name */
FILE *stream; /*output stream or NULL */
} pkg[H5_NPKGS];
} H5_debug_t;
extern H5_debug_t H5_debug_g;
#define H5DEBUG(X) (H5_debug_g.pkg[H5_PKG_##X].stream)
/*-------------------------------------------------------------------------
* Purpose: These macros are inserted automatically just after the
* FUNC_ENTER() macro of API functions and are used to trace
* application program execution. Unless H5_DEBUG_API has been
* defined they are no-ops.
*
* Arguments: R - Return type encoded as a string
* T - Argument types encoded as a string
* A0-An - Arguments. The number at the end of the macro name
* indicates the number of arguments.
*
* Programmer: Robb Matzke
*
* Modifications:
*-------------------------------------------------------------------------
*/
#ifdef H5_DEBUG_API
#define H5TRACE_DECL const char *RTYPE=NULL
#define H5TRACE0(R,T) RTYPE=R; \
H5_trace(0,FUNC,T)
#define H5TRACE1(R,T,A0) RTYPE=R; \
H5_trace(0,FUNC,T,#A0,A0)
#define H5TRACE2(R,T,A0,A1) RTYPE=R; \
H5_trace(0,FUNC,T,#A0,A0,#A1,A1)
#define H5TRACE3(R,T,A0,A1,A2) RTYPE=R; \
H5_trace(0,FUNC,T,#A0,A0,#A1,A1, \
#A2,A2)
#define H5TRACE4(R,T,A0,A1,A2,A3) RTYPE=R; \
H5_trace(0,FUNC,T,#A0,A0,#A1,A1, \
#A2,A2,#A3,A3)
#define H5TRACE5(R,T,A0,A1,A2,A3,A4) RTYPE=R; \
H5_trace(0,FUNC,T,#A0,A0,#A1,A1, \
#A2,A2,#A3,A3,#A4,A4)
#define H5TRACE6(R,T,A0,A1,A2,A3,A4,A5) RTYPE=R; \
H5_trace(0,FUNC,T,#A0,A0,#A1,A1, \
#A2,A2,#A3,A3,#A4,A4, \
#A5,A5)
#define H5TRACE7(R,T,A0,A1,A2,A3,A4,A5,A6) RTYPE=R; \
H5_trace(0,FUNC,T,#A0,A0,#A1,A1, \
#A2,A2,#A3,A3,#A4,A4, \
#A5,A5,#A6,A6)
#define H5TRACE_RETURN(V) if (RTYPE) { \
H5_trace(1,NULL,RTYPE,NULL,V); \
RTYPE=NULL; \
}
#else
#define H5TRACE_DECL /*void*/
#define H5TRACE0(R,T) /*void*/
#define H5TRACE1(R,T,A0) /*void*/
#define H5TRACE2(R,T,A0,A1) /*void*/
#define H5TRACE3(R,T,A0,A1,A2) /*void*/
#define H5TRACE4(R,T,A0,A1,A2,A3) /*void*/
#define H5TRACE5(R,T,A0,A1,A2,A3,A4) /*void*/
#define H5TRACE6(R,T,A0,A1,A2,A3,A4,A5) /*void*/
#define H5TRACE7(R,T,A0,A1,A2,A3,A4,A5,A6) /*void*/
#define H5TRACE_RETURN(V) /*void*/
#endif
__DLL__ void H5_trace(hbool_t returning, const char *func, const char *type,
...);
/*-------------------------------------------------------------------------
* Purpose: Register function entry for library initialization and code
* profiling.
*
* Notes: Every file must have a file-scope variable called
* `initialize_interface_g' of type hbool_t which is initialized
* to FALSE.
*
* Don't use local variable initializers which contain
* calls to other library functions since the initializer
* would happen before the FUNC_ENTER() gets called. Don't
* use initializers that require special cleanup code to
* execute if FUNC_ENTER() fails since a failing FUNC_ENTER()
* returns immediately without branching to the `done' label.
*
* Programmer: Quincey Koziol
*
* Modifications:
*
* Robb Matzke, 4 Aug 1997
* The `interface_init_func' can be the null pointer. Changed
* HGOTO_ERROR() to HRETURN_ERROR() since no clean-up needs to occur
* when an error is detected at this point since this must be the
* first executable statement in a function. This allows functions
* to omit the `done:' label when convenient to do so.
*
* Robb Matzke, 4 Aug 1997
* The pablo mask comes from the constant PABLO_MASK defined on
* a per-file basis. The `pablo_func_id' is generated from the
* `func_name' argument by prepending an `ID_' to the name. The
* pablo function identifier should be saved in a local variable
* so FUNC_LEAVE() can access it.
*
* Robb Matzke, 4 Aug 1997
* It is safe to call this function even inside various library
* initializing functions. Infinite recursion is no longer a
* danger.
*
* Robb Matzke, 3 Dec 1997
* The interface initialization function is no longer passed as an
* argument unless the `FUNC_ENTER_INIT' form is called. Instead, the
* function comes from the `INTERFACE_INIT' constant which must be
* defined in every source file.
*
* Robb Matzke, 17 Jun 1998
* Added auto variable RTYPE which is initialized by the tracing macros.
*-------------------------------------------------------------------------
*/
/* Is `S' the name of an API function? */
#define H5_IS_API(S) ('_'!=S[2] && '_'!=S[3] && (!S[4] || '_'!=S[4]))
/* global library version information string */
extern char H5_lib_vers_info_g[];
/* Lock headers */
#ifdef H5_HAVE_THREADSAFE
/* Include required thread-safety header */
#include "H5TSprivate.h"
/* replacement structure for original global variable */
typedef struct H5_api_struct {
H5TS_mutex_t init_lock; /* API entrance mutex */
hbool_t H5_libinit_g;
} H5_api_t;
/* Macro for first thread initialization */
#define H5_FIRST_THREAD_INIT \
pthread_once(&H5TS_first_init_g, H5TS_first_thread_init);
/* Macros for threadsafe HDF-5 Phase I locks */
#define H5_INIT_GLOBAL H5_g.H5_libinit_g
#define H5_API_LOCK_BEGIN \
if (H5_IS_API(FUNC)) { \
H5TS_mutex_lock(&H5_g.init_lock);
#define H5_API_LOCK_END }
#define H5_API_UNLOCK_BEGIN \
if (H5_IS_API(FUNC)) { \
H5TS_mutex_unlock(&H5_g.init_lock);
#define H5_API_UNLOCK_END }
/* Macros for thread cancellation-safe mechanism */
#define H5_API_UNSET_CANCEL \
if (H5_IS_API(FUNC)) { \
H5TS_cancel_count_inc(); \
}
#define H5_API_SET_CANCEL \
if (H5_IS_API(FUNC)) { \
H5TS_cancel_count_dec(); \
}
extern H5_api_t H5_g;
#else
/* disable any first thread init mechanism */
#define H5_FIRST_THREAD_INIT
#define H5_INIT_GLOBAL H5_libinit_g
/* disable locks (sequential version) */
#define H5_API_LOCK_BEGIN
#define H5_API_LOCK_END
#define H5_API_UNLOCK_BEGIN
#define H5_API_UNLOCK_END
/* disable cancelability (sequential version) */
#define H5_API_UNSET_CANCEL
#define H5_API_SET_CANCEL
/* extern global variables */
extern hbool_t H5_libinit_g; /*good thing C's lazy about extern! */
#endif
#define FUNC_ENTER(func_name,err) FUNC_ENTER_INIT(func_name,INTERFACE_INIT,err)
#define FUNC_ENTER_INIT(func_name,interface_init_func,err) { \
CONSTR (FUNC, #func_name); \
PABLO_SAVE (ID_ ## func_name) \
static unsigned know_api=0, is_api=0; \
H5TRACE_DECL; \
\
PABLO_TRACE_ON (PABLO_MASK, pablo_func_id); \
\
/* Initialize the library */ \
H5_FIRST_THREAD_INIT \
H5_API_UNSET_CANCEL \
H5_API_LOCK_BEGIN \
if (!(H5_INIT_GLOBAL)) { \
H5_INIT_GLOBAL = TRUE; \
if (H5_init_library()<0) { \
HRETURN_ERROR (H5E_FUNC, H5E_CANTINIT, err, \
"library initialization failed"); \
} \
} \
H5_API_LOCK_END \
\
/* Initialize this interface or bust */ \
if (!interface_initialize_g) { \
interface_initialize_g = 1; \
if (interface_init_func && \
((herr_t(*)(void))interface_init_func)()<0) { \
interface_initialize_g = 0; \
HRETURN_ERROR (H5E_FUNC, H5E_CANTINIT, err, \
"interface initialization failed"); \
} \
} \
\
/* Check if we know this is an API function or not */ \
if(!know_api) { \
know_api=1; \
is_api=H5_IS_API(FUNC); \
} \
\
/* Clear thread error stack entering public functions */ \
if (is_api && H5E_clearable_g) { \
H5E_clear (); \
} \
{
/*-------------------------------------------------------------------------
* Purpose: Register function exit for code profiling. This should be
* the last statement executed by a function.
*
* Programmer: Quincey Koziol
*
* Modifications:
*
* Robb Matzke, 4 Aug 1997
* The pablo mask comes from the constant PABLO_MASK defined on a
* per-file basis. The pablo_func_id comes from an auto variable
* defined by FUNC_ENTER.
*
*-------------------------------------------------------------------------
*/
#define FUNC_LEAVE(return_value) HRETURN(return_value)}}
/*
* The FUNC_ENTER() and FUNC_LEAVE() macros make calls to Pablo functions
* through one of these two sets of macros.
*/
#ifdef H5_HAVE_PABLO
# define PABLO_SAVE(func_id) intn pablo_func_id = func_id;
# define PABLO_TRACE_ON(m, f) TRACE_ON(m,f)
# define PABLO_TRACE_OFF(m, f) TRACE_OFF(m,f)
#else
# define PABLO_SAVE(func_id) /*void */
# define PABLO_TRACE_ON(m, f) /*void */
# define PABLO_TRACE_OFF(m, f) /*void */
#endif
/* Private functions, not part of the publicly documented API */
__DLL__ herr_t H5_init_library(void);
__DLL__ void H5_term_library(void);
/* Functions to terminate interfaces */
__DLL__ intn H5A_term_interface(void);
__DLL__ intn H5D_term_interface(void);
__DLL__ intn H5F_term_interface(void);
__DLL__ intn H5G_term_interface(void);
__DLL__ intn H5I_term_interface(void);
__DLL__ intn H5P_term_interface(void);
__DLL__ intn H5R_term_interface(void);
__DLL__ intn H5S_term_interface(void);
__DLL__ intn H5TN_term_interface(void);
__DLL__ intn H5T_term_interface(void);
__DLL__ intn H5Z_term_interface(void);
#endif
|