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#include <stdio.h>
#include <stdlib.h>
#include "hdf5.h"
#ifndef FALSE
#define FALSE 0
#endif
#ifndef TRUE
#define TRUE 1
#endif
int do_test_files();
int h5diff_dataset( hid_t file1_id, hid_t file2_id, const char *dset_name );
void array_diff( void *buf1, void *buf2, hsize_t tot_cnt, hid_t type_id );
herr_t get_ndsets( hid_t loc_id, const char *group_name );
herr_t count_dsets( hid_t loc_id, const char *name, void *op_data);
/*-------------------------------------------------------------------------
* Function: usage
*
* Purpose: print a usage message
*
* Return: void
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: October 8, 2002
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
void usage( const char *progname )
{
#define USAGE "\
[-d dset] The name of the dataset to compare\n\
file1 File name of the first HDF5 file\n\
file2 File name of the second HDF5 file\n"
fprintf(stderr,
"%s [-d] file1 file2\n%s",
progname,
USAGE);
exit(EXIT_FAILURE);
}
/*-------------------------------------------------------------------------
* Function: main
*
* Purpose: H5diff
*
* Return: Success: 0, Failure: 1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: October 8, 2002
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
int main(int argc, const char *argv[])
{
const char *progname = argv[0];
int dset_only = FALSE;
int argno;
const char *s = NULL;
const char *file1_name = NULL;
const char *file2_name = NULL;
const char *dset_name = NULL;
hid_t file1_id, file2_id;
herr_t status;
int ndsets;
do_test_files();
/*-------------------------------------------------------------------------
* parse command line options
*-------------------------------------------------------------------------
*/
if (argc < 4) {
usage( progname );
exit(EXIT_FAILURE);
}
/* parse command line options */
for (argno=1; argno<argc ; argno++)
{
/* get the single-letter switches */
if ( '-'==argv[argno][0] )
{
for (s=argv[argno]+1; *s; s++)
{
switch (*s) {
case 'h':
usage(progname);
exit(EXIT_SUCCESS);
case 'd':
dset_only = TRUE;
dset_name = argv[argno+1];
break;
} /*switch*/
} /*for*/
} /*if*/
}/*for*/
/*-------------------------------------------------------------------------
* process the files
*-------------------------------------------------------------------------
*/
file1_name = argv[argno-2];
file2_name = argv[argno-1];
/* Open the files */
if ((file1_id=H5Fopen(file1_name,H5F_ACC_RDONLY,H5P_DEFAULT))<0 ||
(file2_id=H5Fopen(file2_name,H5F_ACC_RDONLY,H5P_DEFAULT))<0)
exit(EXIT_FAILURE);
/* Get the number of datasets */
ndsets = get_ndsets( file1_id, "." );
if ( dset_only )
{
h5diff_dataset(file1_id,file2_id,dset_name);
}
/* Close */
status = H5Fclose(file1_id);
status = H5Fclose(file2_id);
return 0;
}
/*-------------------------------------------------------------------------
* Function: h5diff_dataset
*
* Purpose:
*
* Return: Success: 0, Failure: -11
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: October 8, 2002
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
int h5diff_dataset( hid_t file1_id, hid_t file2_id, const char *dset_name )
{
hid_t dset1_id, dset2_id;
hid_t space1_id, space2_id;
hid_t type1_id, type2_id;
hid_t rank1, rank2;
void *buf1, *buf2;
hsize_t tot_cnt, tot_cnt1, tot_cnt2;
hsize_t dims1[32], dims2[32];
int i;
herr_t status;
/*-------------------------------------------------------------------------
* open the handles
*-------------------------------------------------------------------------
*/
/* Open the datasets */
if ( (dset1_id = H5Dopen(file1_id,dset_name)) < 0 )
return -1;
if ( (dset2_id = H5Dopen(file2_id,dset_name)) < 0 )
return -1;
/* Get the datatype */
if ( (type1_id = H5Dget_type(dset1_id)) < 0 )
goto out;
/* Get the datatype */
if ( (type2_id = H5Dget_type(dset2_id)) < 0 )
goto out;
/* Get the dataspace handle */
if ( (space1_id = H5Dget_space(dset1_id)) < 0 )
return -1;
/* Get rank */
if ( (rank1 = H5Sget_simple_extent_ndims(space1_id)) < 0 )
return -1;
/* Get the dataspace handle */
if ( (space2_id = H5Dget_space(dset2_id)) < 0 )
return -1;
/* Get rank */
if ( (rank2 = H5Sget_simple_extent_ndims(space2_id)) < 0 )
return -1;
/* Get dimensions */
if ( H5Sget_simple_extent_dims(space1_id,dims1,NULL) < 0 )
goto out;
/* Get dimensions */
if ( H5Sget_simple_extent_dims(space2_id,dims2,NULL) < 0 )
goto out;
/*-------------------------------------------------------------------------
* compare
*-------------------------------------------------------------------------
*/
printf("Dataset Name: %s .... Comparing\n", dset_name);
if ( rank1 != rank2 )
{
goto out;
}
tot_cnt1 = 1;
for (i = 0; i < rank1; i++)
{
tot_cnt1 *= dims1[i];
}
tot_cnt2 = 1;
for (i = 0; i < rank2; i++)
{
tot_cnt2 *= dims2[i];
}
buf1 = (void *) malloc((unsigned) (tot_cnt1*H5Tget_size(type1_id)));
buf2 = (void *) malloc((unsigned) (tot_cnt2*H5Tget_size(type2_id)));
if ( H5Dread(dset1_id,type1_id,H5S_ALL,H5S_ALL,H5P_DEFAULT,buf1) < 0 )
goto out;
if ( H5Dread(dset2_id,type2_id,H5S_ALL,H5S_ALL,H5P_DEFAULT,buf2) < 0 )
goto out;
if (tot_cnt1 > tot_cnt2)
tot_cnt = tot_cnt2;
else
tot_cnt = tot_cnt1;
array_diff(buf1,buf2,tot_cnt,type1_id);
free((char *) buf1);
free((char *) buf2);
/*-------------------------------------------------------------------------
* close
*-------------------------------------------------------------------------
*/
out:
/* Close */
status = H5Dclose(dset1_id);
status = H5Dclose(dset2_id);
status = H5Sclose(space1_id);
status = H5Sclose(space2_id);
status = H5Tclose(type1_id);
status = H5Tclose(type2_id);
return 0;
}
/*-------------------------------------------------------------------------
* Function: array_diff
*
* Purpose:
*
* Return: Success: 0, Failure: -11
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: October 8, 2002
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
void array_diff( void *buf1, void *buf2, hsize_t tot_cnt, hid_t type_id )
{
#if 0
char *i1ptr1, *i1ptr2;
short *i2ptr1, *i2ptr2;
float *fptr1, *fptr2;
double *dptr1, *dptr2;
#endif
int *i4ptr1, *i4ptr2;
int i;
H5T_class_t type_class;
size_t type_size;
/* Get the class. */
type_class = H5Tget_class( type_id );
/* Get the size. */
type_size = H5Tget_size( type_id );
switch(type_class)
{
case H5T_INTEGER:
switch(type_size)
{
case 4:
i4ptr1 = (int *) buf1;
i4ptr2 = (int *) buf2;
for ( i = 0; i < tot_cnt; i++)
{
if (*i4ptr1 != *i4ptr2)
{
printf("Index: %d, File1: %d, File2: %d\n", i, *i4ptr1, *i4ptr2);
}
i4ptr1++; i4ptr2++;
}
break;
} /*switch*/
break; /* H5T_INTEGER */
} /*switch*/
}
/*-------------------------------------------------------------------------
* Function: get_ndsets
*
* Purpose: Counts the number of datasets in the group GROUP_NAME
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: October 10, 2002
*
* Return:
* Success: The return value of the first operator that
* returns non-zero, or zero if all members were
* processed with no operator returning non-zero.
*
* Failure: Negative if something goes wrong within the
* library, or the negative value returned by one
* of the operators.
*
*-------------------------------------------------------------------------
*/
herr_t get_ndsets( hid_t loc_id, const char *group_name )
{
int ndsets = 0;
if ( H5Giterate( loc_id, group_name, NULL, count_dsets, (void *)&ndsets ) < 0 )
return -1;
return ndsets;
}
/*-------------------------------------------------------------------------
* Function: count_dsets
*
* Purpose: operator function used by get_ndsets
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: October 10, 2002
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t count_dsets( hid_t loc_id, const char *name, void *op_data)
{
H5G_stat_t statbuf;
if (H5Gget_objinfo( loc_id, name, FALSE, &statbuf) < 0 )
return -1;
if ( statbuf.type == H5G_DATASET )
(*(int *)op_data)++;
/* Define a default zero value for return. This will cause the iterator to continue */
return 0;
}
/*-------------------------------------------------------------------------
* do some test files
*-------------------------------------------------------------------------
*/
int do_test_files()
{
hid_t file_id;
hid_t dataset_id;
hid_t space_id;
hsize_t dims1[1] = { 5 };
int data1[5] = {1,1,1,1,1};
hsize_t dims2[1] = { 5 };
int data2[5] = {1,1,1,2,2};
herr_t status;
/*-------------------------------------------------------------------------
* Create one file
*-------------------------------------------------------------------------
*/
/* Create a file */
file_id = H5Fcreate ("h5diff_test1.h5", H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
/* Create a data space */
space_id = H5Screate_simple(1,dims1,NULL);
/* Create a dataset "dset" */
dataset_id = H5Dcreate(file_id,"dset",H5T_NATIVE_INT,space_id,H5P_DEFAULT);
/* Write the data */
status = H5Dwrite(dataset_id,H5T_NATIVE_INT,H5S_ALL,H5S_ALL,H5P_DEFAULT,data1);
/* Close */
status = H5Dclose(dataset_id);
status = H5Sclose(space_id);
status = H5Fclose(file_id);
/*-------------------------------------------------------------------------
* Create another file
*-------------------------------------------------------------------------
*/
/* Create a file */
file_id = H5Fcreate ("h5diff_test2.h5", H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
/* Create a data space */
space_id = H5Screate_simple(1,dims2,NULL);
/* Create a dataset "dset" */
dataset_id = H5Dcreate(file_id,"dset",H5T_NATIVE_INT,space_id,H5P_DEFAULT);
/* Write the data */
status = H5Dwrite(dataset_id,H5T_NATIVE_INT,H5S_ALL,H5S_ALL,H5P_DEFAULT,data2);
/* Close */
status = H5Dclose(dataset_id);
status = H5Sclose(space_id);
status = H5Fclose(file_id);
return 0;
}
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