path: root/tools/h5repack/h5repack_parse.c

/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
 * Copyright by the Board of Trustees of the University of Illinois.         *
 * All rights reserved.                                                      *
 *                                                                           *
 * This file is part of HDF5.  The full HDF5 copyright notice, including     *
 * terms governing use, modification, and redistribution, is contained in    *
 * the files COPYING and Copyright.html.  COPYING can be found at the root   *
 * of the source code distribution tree; Copyright.html can be found at the  *
 * root level of an installed copy of the electronic HDF5 document set and   *
 * is linked from the top-level documents page.  It can also be found at     *
 * http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html.  If you do not have     *
 * access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
 * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */

#include <stdlib.h>
#include <string.h>
#include <stdio.h>
#include <ctype.h>
#include "h5repack_parse.h"


/*-------------------------------------------------------------------------
 * Function: parse_comp
 *
 * Purpose: read compression info
 *
 * Return: a list of names, the number of names and its compression type
 *  NULL, on error
 *
 * Examples: 
 * "AA,B,CDE:RLE" 
 * "GZIP 6"
 * "A,B:NONE"
 *
 * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
 *
 * Date: September, 23, 2003
 *
 *-------------------------------------------------------------------------
 */


obj_list_t* parse_comp(const char *str, 
                       int *n_objs, 
                       comp_info_t *comp)
{
 unsigned    i, u;
 char        c;
 size_t      len=strlen(str);
 int         j, m, n, k, end_obj=-1, no_param=0;
 char        obj[MAX_NC_NAME]; 
 char        scomp[10];
 char        stype[5];
 obj_list_t* obj_list=NULL;

 /* initialize compression  info */
 memset(comp,0,sizeof(comp_info_t));

 /* check for the end of object list and number of objects */
 for ( i=0, n=0; i<len; i++)
 {
  c = str[i];
  if ( c==':' )
  {
   end_obj=i;
  }
  if ( c==',' )
  {
   n++;
  }
 }

 if (end_obj==-1) { /* missing : */
  printf("Input Error: Invalid compression input in <%s>\n",str);
  exit(1);
 }
  
 n++;
 obj_list=malloc(n*sizeof(obj_list_t));
 if (obj_list==NULL)
 {
  printf("Could not alloc object list\n");
  return NULL;
 }
 *n_objs=n;

 /* get object list */
 for ( j=0, k=0, n=0; j<end_obj; j++,k++)
 {
  c = str[j];
  obj[k]=c;
  if ( c==',' || j==end_obj-1) 
  {
   if ( c==',') obj[k]='\0'; else obj[k+1]='\0';
   strcpy(obj_list[n].obj,obj);
   memset(obj,0,sizeof(obj));
   n++;
   k=-1;
  }
 }
 /* nothing after : */
 if (end_obj+1==(int)len)
 {
  if (obj_list) free(obj_list);
  printf("Input Error: Invalid compression type in <%s>\n",str);
  exit(1);
 }


 /* get compression type */
 m=0;
 for ( i=end_obj+1, k=0; i<len; i++,k++)
 {
  c = str[i];
  scomp[k]=c;
  if ( c==' ' || i==len-1) 
  {
   if ( c==' ') {      /*one more parameter */
    scomp[k]='\0';     /*cut space */

    /* here we could have 1, 2 or 3 digits  */
    for ( m=0,u=i+1; u<len; u++,m++) {
     c = str[u];
     if (!isdigit(c)){
      if (obj_list) free(obj_list);
      printf("Input Error: Compression parameter not digit in <%s>\n",str);
      exit(1);
     }
     stype[m]=c;
    }
    stype[m]='\0';
    comp->info=atoi(stype);
    i+=m; /* jump */
   }
   else if (i==len-1) { /*no more parameters */
    scomp[k+1]='\0';
    no_param=1;
   }

/*-------------------------------------------------------------------------
 * H5Z_FILTER_NONE
 *-------------------------------------------------------------------------
 */
   if (strcmp(scomp,"NONE")==0)
    comp->type=H5Z_FILTER_NONE;

/*-------------------------------------------------------------------------
 * H5Z_FILTER_DEFLATE
 *-------------------------------------------------------------------------
 */
   else if (strcmp(scomp,"GZIP")==0)
   {
    comp->type=H5Z_FILTER_DEFLATE;
    if (no_param) { /*no more parameters, GZIP must have parameter */
     if (obj_list) free(obj_list);
     printf("Input Error: Missing compression parameter in <%s>\n",str);
     exit(1);
    }
   }

/*-------------------------------------------------------------------------
 * H5Z_FILTER_SZIP
 *-------------------------------------------------------------------------
 */
   else if (strcmp(scomp,"SZIP")==0)
   {
    comp->type=H5Z_FILTER_SZIP;
    if (m>0){ /*SZIP does not have parameter */
     if (obj_list) free(obj_list);
     printf("Input Error: Extra compression parameter in SZIP <%s>\n",str);
     exit(1);
    }
   }
   else {
    if (obj_list) free(obj_list);
    printf("Input Error: Invalid compression type in <%s>\n",str);
    exit(1);
   }
  }
 } /*i*/


 /* check valid parameters */
 switch (comp->type)
  {
  case H5Z_FILTER_DEFLATE:
   if (comp->info<0 || comp->info>9 ){
    if (obj_list) free(obj_list);
    printf("Input Error: Invalid compression parameter in <%s>\n",str);
    exit(1);
   }
   break;
  case H5Z_FILTER_SZIP:
   break;
  };

 return obj_list;
}


/*-------------------------------------------------------------------------
 * Function: get_scomp
 *
 * Purpose: return the compression type as a string
 *
 * Return: name of filter, exit on error
 *
 *-------------------------------------------------------------------------
 */

const char* get_scomp(int code)
{
 if (code==H5Z_FILTER_NONE)
  return "NONE";
 else if (code==H5Z_FILTER_DEFLATE)
  return "GZIP";
 else if (code==H5Z_FILTER_SZIP)
  return "SZIP";
 else {
  printf("Input Error in compression type\n");
  exit(1);
 }
 return NULL;
} 


/*-------------------------------------------------------------------------
 * Function: parse_chunk
 *
 * Purpose: read chunkink info
 *
 * Return: a list of names, the number of names and its chunking info
 *  NULL, on error
 *
 * Examples: 
 * "AA,B,CDE:10X10 
 * "10X10"
 *
 * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
 *
 * Date: September, 23, 2003
 *
 *-------------------------------------------------------------------------
 */


obj_list_t* parse_chunk(const char *str, 
                        int *n_objs, 
                        hsize_t *chunk_lengths, 
                        int *chunk_rank)
{
 obj_list_t* obj_list=NULL;
 unsigned    i;
 char        c;
 size_t      len=strlen(str);
 int         j, n, k, end_obj=-1, c_index;
 char        obj[MAX_NC_NAME]; 
 char        sdim[10];
 
 /* check for the end of object list and number of objects */
 for ( i=0, n=0; i<len; i++)
 {
  c = str[i];
  if ( c==':' )
  {
   end_obj=i;
  }
  if ( c==',' )
  {
   n++;
  }
 }

 if (end_obj==-1) { /* missing : */
  printf("Input Error: Invalid chunking input in <%s>\n",str);
  exit(1);
 }
  
 n++;
 obj_list=malloc(n*sizeof(obj_list_t));
 if (obj_list==NULL)
 {
  printf("Could not alloc object list\n");
  return NULL;
 }
 *n_objs=n;

 /* get object list */
 for ( j=0, k=0, n=0; j<end_obj; j++,k++)
 {
  c = str[j];
  obj[k]=c;
  if ( c==',' || j==end_obj-1) 
  {
   if ( c==',') obj[k]='\0'; else obj[k+1]='\0';
   strcpy(obj_list[n].obj,obj);
   memset(obj,0,sizeof(obj));
   n++;
   k=-1;
  }
 }

 /* nothing after : */
 if (end_obj+1==(int)len)
 {
  if (obj_list) free(obj_list);
  printf("Input Error: Invalid chunking in <%s>\n",str);
  exit(1);
 }

 /* get chunk info */
 k=0; 
 for ( i=end_obj+1, c_index=0; i<len; i++)
 {
  c = str[i];
  sdim[k]=c;
  k++; /*increment sdim index */

  if (!isdigit(c) && c!='x' && c!='N' && c!='O' && c!='N' && c!='E'){
   if (obj_list) free(obj_list);
   printf("Input Error: Invalid chunking in <%s>\n",str);
   exit(1);
  }

  if ( c=='x' || i==len-1) 
  {
   if ( c=='x') {  
    sdim[k-1]='\0';  
    k=0;
    chunk_lengths[c_index]=atoi(sdim);
    if (chunk_lengths[c_index]==0) {
      if (obj_list) free(obj_list);
      printf("Input Error: Invalid chunking in <%s>\n",str);
      exit(1);
     }
    c_index++;
   }
   else if (i==len-1) { /*no more parameters */
    sdim[k]='\0';  
    k=0;
    if (strcmp(sdim,"NONE")==0)
    {
     *chunk_rank=-2;
    }
    else
    {
     chunk_lengths[c_index]=atoi(sdim);
     if (chunk_lengths[c_index]==0){
      if (obj_list) free(obj_list);
      printf("Input Error: Invalid chunking in <%s>\n",str);
      exit(1);
     }
     *chunk_rank=c_index+1;
    }
   } /*if */
  } /*if c=='x' || i==len-1 */
 } /*i*/

 return obj_list;
}



/*-------------------------------------------------------------------------
 * Function: parse_number
 *
 * Purpose: read a number from command line argument
 *
 * Return: number, -1 for FAIL
 *
 * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
 *
 * Date: September, 23, 2003
 *
 *-------------------------------------------------------------------------
 */


int parse_number(char *str)
{
 unsigned    i;
 int         n;
 char        c;
 size_t      len=strlen(str);
  
 for ( i=0; i<len; i++)
 {
  c = str[i];
  if (!isdigit(c)){
   return -1;
  }
 }
 str[i]='\0';     
 n=atoi(str);
 return n;
}