1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
#ifndef H5DIFF_H__
#define H5DIFF_H__
#include "hdf5.h"
#include "h5trav.h"
#define MAX_FILENAME 1024
/*-------------------------------------------------------------------------
* command line options
*-------------------------------------------------------------------------
*/
/* linked list to keep exclude path list */
struct exclude_path_list {
char *obj_path;
h5trav_type_t obj_type;
struct exclude_path_list * next;
};
typedef struct {
int m_quiet; /* quiet mide: no output at all */
int m_report; /* report mode: print the data */
int m_verbose; /* verbose mode: print the data, list of objcets, warnings */
int d; /* delta, absolute value to compare */
double delta; /* delta value */
int p; /* relative error to compare*/
int use_system_epsilon; /* flag to use system epsilon (1 or 0) */
double percent; /* relative error value */
int n; /* count, compare up to count */
hsize_t count; /* count value */
int follow_links; /* follow symbolic links */
int no_dangle_links; /* return error when find dangling link */
int err_stat; /* an error ocurred (1, error, 0, no error) */
int cmn_objs; /* do we have common objects */
int not_cmp; /* are the objects comparable */
int contents; /* equal contents */
int do_nans; /* consider Nans while diffing floats */
int m_list_not_cmp; /* list not comparable messages */
int exclude_path; /* exclude path to an object */
struct exclude_path_list * exclude; /* keep exclude path list */
} diff_opt_t;
/*-------------------------------------------------------------------------
* public functions
*-------------------------------------------------------------------------
*/
#ifdef __cplusplus
extern "C" {
#endif
H5TOOLS_DLL hsize_t h5diff(const char *fname1,
const char *fname2,
const char *objname1,
const char *objname2,
diff_opt_t *options);
#ifdef H5_HAVE_PARALLEL
H5TOOLS_DLL void phdiff_dismiss_workers(void);
H5TOOLS_DLL void print_manager_output(void);
#endif
#ifdef __cplusplus
}
#endif
/*-------------------------------------------------------------------------
* private functions
*-------------------------------------------------------------------------
*/
hsize_t diff_dataset( hid_t file1_id,
hid_t file2_id,
const char *obj1_name,
const char *obj2_name,
diff_opt_t *options);
hsize_t diff_datasetid( hid_t dset1_id,
hid_t dset2_id,
const char *obj1_name,
const char *obj2_name,
diff_opt_t *options);
hsize_t diff( hid_t file1_id,
const char *path1,
hid_t file2_id,
const char *path2,
diff_opt_t *options,
h5trav_type_t type );
hsize_t diff_compare( hid_t file1_id,
const char *file1_name,
const char *obj1_name,
trav_info_t *info1,
hid_t file2_id,
const char *file2_name,
const char *obj2_name,
trav_info_t *info2,
diff_opt_t *options );
hsize_t diff_match( hid_t file1_id, const char *grp1, trav_info_t *info1,
hid_t file2_id, const char *grp2, trav_info_t *info2,
trav_table_t *table, diff_opt_t *options );
hsize_t diff_array( void *_mem1,
void *_mem2,
hsize_t nelmts,
hsize_t hyper_start,
int rank,
hsize_t *dims,
diff_opt_t *options,
const char *name1,
const char *name2,
hid_t m_type,
hid_t container1_id,
hid_t container2_id); /* dataset where the reference came from*/
int diff_can_type( hid_t f_type1, /* file data type */
hid_t f_type2, /* file data type */
int rank1,
int rank2,
hsize_t *dims1,
hsize_t *dims2,
hsize_t *maxdim1,
hsize_t *maxdim2,
const char *obj1_name,
const char *obj2_name,
diff_opt_t *options,
int is_compound);
hsize_t diff_attr(hid_t loc1_id,
hid_t loc2_id,
const char *path1,
const char *path2,
diff_opt_t *options);
/*-------------------------------------------------------------------------
* utility functions
*-------------------------------------------------------------------------
*/
void print_found(hsize_t nfound);
void print_type(hid_t type);
const char* diff_basename(const char *name);
const char* get_type(h5trav_type_t type);
const char* get_class(H5T_class_t tclass);
const char* get_sign(H5T_sign_t sign);
void print_dimensions (int rank, hsize_t *dims);
int print_objname(diff_opt_t *options, hsize_t nfound);
void do_print_objname (const char *OBJ, const char *path1, const char *path2);
hsize_t diff_datum(void *_mem1,
void *_mem2,
hid_t m_type,
hsize_t i,
int rank,
hsize_t *dims,
hsize_t *acc,
hsize_t *pos,
diff_opt_t *options,
const char *obj1,
const char *obj2,
hid_t container1_id,
hid_t container2_id, /*where the reference came from*/
int *ph); /*print header */
hsize_t diff_float(unsigned char *mem1,
unsigned char *mem2,
hsize_t nelmts,
hsize_t hyper_start,
int rank,
hsize_t *dims,
hsize_t *acc,
hsize_t *pos,
diff_opt_t *options,
const char *obj1,
const char *obj2,
int *ph);
hsize_t diff_double(unsigned char *mem1,
unsigned char *mem2,
hsize_t nelmts,
hsize_t hyper_start,
int rank,
hsize_t *dims,
hsize_t *acc,
hsize_t *pos,
diff_opt_t *options,
const char *obj1,
const char *obj2,
int *ph);
#if H5_SIZEOF_LONG_DOUBLE !=0
hsize_t diff_ldouble(unsigned char *mem1,
unsigned char *mem2,
hsize_t nelmts,
hsize_t hyper_start,
int rank,
hsize_t *dims,
hsize_t *acc,
hsize_t *pos,
diff_opt_t *options,
const char *obj1,
const char *obj2,
int *ph);
#endif
hsize_t diff_schar(unsigned char *mem1,
unsigned char *mem2,
hsize_t nelmts,
hsize_t hyper_start,
int rank,
hsize_t *dims,
hsize_t *acc,
hsize_t *pos,
diff_opt_t *options,
const char *obj1,
const char *obj2,
int *ph);
hsize_t diff_uchar(unsigned char *mem1,
unsigned char *mem2,
hsize_t nelmts,
hsize_t hyper_start,
int rank,
hsize_t *dims,
hsize_t *acc,
hsize_t *pos,
diff_opt_t *options,
const char *obj1,
const char *obj2,
int *ph);
hsize_t diff_short(unsigned char *mem1,
unsigned char *mem2,
hsize_t nelmts,
hsize_t hyper_start,
int rank,
hsize_t *dims,
hsize_t *acc,
hsize_t *pos,
diff_opt_t *options,
const char *obj1,
const char *obj2,
int *ph);
hsize_t diff_ushort(unsigned char *mem1,
unsigned char *mem2,
hsize_t nelmts,
hsize_t hyper_start,
int rank,
hsize_t *dims,
hsize_t *acc,
hsize_t *pos,
diff_opt_t *options,
const char *obj1,
const char *obj2,
int *ph);
hsize_t diff_int(unsigned char *mem1,
unsigned char *mem2,
hsize_t nelmts,
hsize_t hyper_start,
int rank,
hsize_t *dims,
hsize_t *acc,
hsize_t *pos,
diff_opt_t *options,
const char *obj1,
const char *obj2,
int *ph);
hsize_t diff_uint(unsigned char *mem1,
unsigned char *mem2,
hsize_t nelmts,
hsize_t hyper_start,
int rank,
hsize_t *dims,
hsize_t *acc,
hsize_t *pos,
diff_opt_t *options,
const char *obj1,
const char *obj2,
int *ph);
hsize_t diff_long(unsigned char *mem1,
unsigned char *mem2,
hsize_t nelmts,
hsize_t hyper_start,
int rank,
hsize_t *dims,
hsize_t *acc,
hsize_t *pos,
diff_opt_t *options,
const char *obj1,
const char *obj2,
int *ph);
hsize_t diff_ulong(unsigned char *mem1,
unsigned char *mem2,
hsize_t nelmts,
hsize_t hyper_start,
int rank,
hsize_t *dims,
hsize_t *acc,
hsize_t *pos,
diff_opt_t *options,
const char *obj1,
const char *obj2,
int *ph);
hsize_t diff_llong(unsigned char *mem1,
unsigned char *mem2,
hsize_t nelmts,
hsize_t hyper_start,
int rank,
hsize_t *dims,
hsize_t *acc,
hsize_t *pos,
diff_opt_t *options,
const char *obj1,
const char *obj2,
int *ph);
hsize_t diff_ullong(unsigned char *mem1,
unsigned char *mem2,
hsize_t nelmts,
hsize_t hyper_start,
int rank,
hsize_t *dims,
hsize_t *acc,
hsize_t *pos,
diff_opt_t *options,
const char *obj1,
const char *obj2,
int *ph);
#endif /* H5DIFF_H__ */
|
