summaryrefslogtreecommitdiffstats
path: root/tools/lib/h5tools.c
blob: 801f83c726147e0cb6a80e01070b2ba47d10a7cc (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127
1128
1129
1130
1131
1132
1133
1134
1135
1136
1137
1138
1139
1140
1141
1142
1143
1144
1145
1146
1147
1148
1149
1150
1151
1152
1153
1154
1155
1156
1157
1158
1159
1160
1161
1162
1163
1164
1165
1166
1167
1168
1169
1170
1171
1172
1173
1174
1175
1176
1177
1178
1179
1180
1181
1182
1183
1184
1185
1186
1187
1188
1189
1190
1191
1192
1193
1194
1195
1196
1197
1198
1199
1200
1201
1202
1203
1204
1205
1206
1207
1208
1209
1210
1211
1212
1213
1214
1215
1216
1217
1218
1219
1220
1221
1222
1223
1224
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
 * Copyright by the Board of Trustees of the University of Illinois.         *
 * All rights reserved.                                                      *
 *                                                                           *
 * This file is part of HDF5.  The full HDF5 copyright notice, including     *
 * terms governing use, modification, and redistribution, is contained in    *
 * the files COPYING and Copyright.html.  COPYING can be found at the root   *
 * of the source code distribution tree; Copyright.html can be found at the  *
 * root level of an installed copy of the electronic HDF5 document set and   *
 * is linked from the top-level documents page.  It can also be found at     *
 * http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html.  If you do not have     *
 * access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
 * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */

/*
 * Programmer:  Robb Matzke <matzke@llnl.gov>
 *              Thursday, July 23, 1998
 *
 * Purpose:	A library for displaying the values of a dataset in a human
 *		readable format.
 */

#include <stdio.h>
#include <stdlib.h>

#include "h5tools.h"
#include "h5tools_str.h"
#include "h5tools_utils.h"
#include "hdf5.h"
#include "H5private.h"

/*
 * The output functions need a temporary buffer to hold a piece of the
 * dataset while it's being printed. This constant sets the limit on the
 * size of that temporary buffer in bytes. For efficiency's sake, choose the
 * largest value suitable for your machine (for testing use a small value).
 */
#if 1
#define H5TOOLS_BUFSIZE         (1024 * 1024)
#else
#define H5TOOLS_BUFSIZE         (1024)
#endif  /* 1 */

#define ALIGN(A,Z)		((((A) + (Z) - 1) / (Z)) * (Z))

/* global variables */
int         indent;
int         compound_data;
FILE       *rawdatastream;	/* should initialize to stdout but gcc moans about it */

/* module-scoped variables */
static int  h5tools_init_g;     /* if h5tools lib has been initialized */
#ifdef H5_HAVE_PARALLEL
static int  h5tools_mpi_init_g; /* if MPI_Init() has been called */
#endif /* H5_HAVE_PARALLEL */

/* Names of VFDs */
static const char *drivernames[]={
    "sec2",
    "family",
    "split",
    "multi",
#ifdef H5_HAVE_STREAM
    "stream",
#endif	/* H5_HAVE_STREAM */
#ifdef H5_HAVE_PARALLEL
    "mpio",
    "mpiposix"
#endif /* H5_HAVE_PARALLEL */
};

/* This enum should match the entries in the above drivers_list since they
 * are indexes into the drivers_list array. */
enum {
    SEC2_IDX = 0
   ,FAMILY_IDX
   ,SPLIT_IDX
   ,MULTI_IDX
#ifdef H5_HAVE_STREAM
   ,STREAM_IDX
#endif	/* H5_HAVE_STREAM */
#ifdef H5_HAVE_PARALLEL
   ,MPIO_IDX
   ,MPIPOSIX_IDX
#endif /* H5_HAVE_PARALLEL */
} driver_idx;
#define NUM_DRIVERS     (sizeof(drivernames) / sizeof(drivernames[0]))

/*-------------------------------------------------------------------------
 * Audience:    Public
 * Chapter:     H5Tools Library
 * Purpose:     Initialize the H5 Tools library
 * Description:
 *      This should be called before any other h5tools function is called.
 *      Effect of any h5tools function called before this has been called is
 *      undetermined.
 * Return:
 *      None
 * Programmer:
 *      Albert Cheng, 2000-10-31
 * Modifications:
 *-------------------------------------------------------------------------
 */
void
h5tools_init(void)
{
    if (!h5tools_init_g) {
	if (!rawdatastream)
	    rawdatastream = stdout;

	h5tools_init_g++;
    }
}

/*-------------------------------------------------------------------------
 * Audience:    Public
 * Chapter:     H5Tools Library
 * Purpose:	Close the H5 Tools library
 * Description:
 *      Close or release resources such as files opened by the library. This
 *      should be called after all other h5tools functions have been called.
 *      Effect of any h5tools function called after this has been called is
 *      undetermined.
 * Return:
 *      None
 * Programmer:
 *      Albert Cheng, 2000-10-31
 * Modifications:
 *-------------------------------------------------------------------------
 */
void
h5tools_close(void)
{
    if (h5tools_init_g) {
	if (rawdatastream && rawdatastream != stdout) {
	    if (fclose(rawdatastream))
		perror("closing rawdatastream");
	    else
		rawdatastream = NULL;
	}

        /* Shut down the library */
        H5close();

#ifdef H5_HAVE_PARALLEL
        /* Check if we need to shut down MPI */
        if(h5tools_mpi_init_g) {
            MPI_Finalize();
            h5tools_mpi_init_g=0;
        } /* end if */
#endif

	h5tools_init_g = 0;
    }
}

/*-------------------------------------------------------------------------
 * Audience:    Private
 * Chapter:     H5Tools Library
 * Purpose:	Get a FAPL for a driver
 * Description:
 *      Get a FAPL for a given VFL driver name.
 * Return:
 *      None
 * Programmer:
 *      Quincey Koziol, 2004-02-04
 * Modifications:
 *-------------------------------------------------------------------------
 */
static hid_t
h5tools_get_fapl(const char *driver, unsigned *drivernum, int argc, const char *argv[])
{
    hid_t               fapl = H5P_DEFAULT;

    /* Determine which driver the user wants to open the file with. Try
     * that driver. If it can't open it, then fail. */
    if (!strcmp(driver, drivernames[SEC2_IDX])) {
        if(drivernum)
            *drivernum = SEC2_IDX;
    } else if (!strcmp(driver, drivernames[FAMILY_IDX])) {
        /* FAMILY Driver */
        if((fapl = H5Pcreate(H5P_FILE_ACCESS))>=0) {
            /* Set member size to be 0 to indicate the current first member size 
             * is the member size. 
             */ 
            H5Pset_fapl_family(fapl, (hsize_t)0, H5P_DEFAULT);

            if(drivernum)
                *drivernum = FAMILY_IDX;
        } /* end if */
    } else if (!strcmp(driver, drivernames[SPLIT_IDX])) {
        /* SPLIT Driver */
        if((fapl = H5Pcreate(H5P_FILE_ACCESS))>=0) {
            H5Pset_fapl_split(fapl, "-m.h5", H5P_DEFAULT, "-r.h5", H5P_DEFAULT);

            if(drivernum)
                *drivernum = SPLIT_IDX;
        } /* end if */
    } else if (!strcmp(driver, drivernames[MULTI_IDX])) {
        /* MULTI Driver */
        if((fapl = H5Pcreate(H5P_FILE_ACCESS))>=0) {
            H5Pset_fapl_multi(fapl, NULL, NULL, NULL, NULL, TRUE);

            if(drivernum)
                *drivernum = MULTI_IDX;
        } /* end if */
#ifdef H5_HAVE_STREAM
    } else if (!strcmp(driver, drivernames[STREAM_IDX])) {
        /* STREAM Driver */
        if((fapl = H5Pcreate(H5P_FILE_ACCESS))>=0) {
            H5Pset_fapl_stream(fapl, NULL);

            if(drivernum)
                *drivernum = STREAM_IDX;
        } /* end if */
#endif	/* H5_HAVE_STREAM */
#ifdef H5_HAVE_PARALLEL
    } else if (!strcmp(driver, drivernames[MPIO_IDX])) {
        /* MPI-I/O Driver */
        if((fapl = H5Pcreate(H5P_FILE_ACCESS))>=0) {
            H5Pset_fapl_mpio(fapl, MPI_COMM_WORLD, MPI_INFO_NULL);

            /* Initialize the MPI library, if it wasn't already */
            if(!h5tools_mpi_init_g) {
                MPI_Init(&argc, (char ***)&argv);

                h5tools_mpi_init_g=1;
            } /* end if */

            if(drivernum)
                *drivernum = MPIO_IDX;
        } /* end if */
    } else if (!strcmp(driver, drivernames[MPIPOSIX_IDX])) {
        /* MPI-I/O Driver */
        if((fapl = H5Pcreate(H5P_FILE_ACCESS))>=0) {
            H5Pset_fapl_mpiposix(fapl, MPI_COMM_WORLD, TRUE);

            /* Initialize the MPI library, if it wasn't already */
            if(!h5tools_mpi_init_g) {
                MPI_Init(&argc, (char ***)&argv);

                h5tools_mpi_init_g=1;
            } /* end if */

            if(drivernum)
                *drivernum = MPIPOSIX_IDX;
        } /* end if */
#endif /* H5_HAVE_PARALLEL */
    } else {
        fapl=(-1);
    }

    return(fapl);
}

/*-------------------------------------------------------------------------
 * Audience:    Public
 * Chapter:     H5Tools Library
 * Purpose:     Open a file with various VFL drivers.
 * Description:
 *      Loop through the various types of VFL drivers trying to open FNAME.
 *      If the HDF5 library is version 1.2 or less, then we have only the SEC2
 *      driver to try out. If the HDF5 library is greater than version 1.2,
 *      then we have the FAMILY, SPLIT, and MULTI drivers to play with (and
 *      the STREAM driver if H5_HAVE_STREAM is defined, that is).
 *
 *      If DRIVER is non-NULL, then it will try to open the file with that
 *      driver first. We assume that the user knows what they are doing so, if
 *      we fail, then we won't try other file drivers.
 * Return:
 *      On success, returns a file id for the opened file. If DRIVERNAME is
 *      non-null then the first DRIVERNAME_SIZE-1 characters of the driver
 *      name are copied into the DRIVERNAME array and null terminated.
 *
 *      Otherwise, the function returns FAIL. If DRIVERNAME is non-null then
 *      the first byte is set to the null terminator.
 * Programmer:
 *      Lost in the mists of time.
 * Modifications:
 *      Robb Matzke, 2000-06-23
 *      We only have to initialize driver[] on the first call, thereby
 *      preventing memory leaks from repeated calls to H5Pcreate().
 *
 *      Robb Matzke, 2000-06-23
 *      Added DRIVERNAME_SIZE arg to prevent overflows when writing to
 *      DRIVERNAME.
 *
 *      Robb Matzke, 2000-06-23
 *      Added test to prevent coredump when the file could not be opened by
 *      any driver.
 *
 *      Robb Matzke, 2000-06-23
 *      Changed name from H5ToolsFopen() so it jives better with the names we
 *      already have at the top of this source file.
 *
 *      Thomas Radke, 2000-09-12
 *      Added Stream VFD to the driver[] array.
 *
 *      Bill Wendling, 2001-01-10
 *      Changed macro behavior so that if we have a version other than 1.2.x
 *      (i.e., > 1.2), then we do the drivers check.
 *
 *      Bill Wendling, 2001-07-30
 *      Added DRIVER parameter so that the user can specify "try this driver"
 *      instead of the default behaviour. If it fails to open the file with
 *      that driver, this will fail completely (i.e., we won't try the other
 *      drivers). We're assuming the user knows what they're doing. How UNIX
 *      of us.
 *-------------------------------------------------------------------------
 */
hid_t
h5tools_fopen(const char *fname, const char *driver, char *drivername,
              size_t drivername_size, int argc, const char *argv[])
{
    unsigned    drivernum;
    hid_t       fid = FAIL;
    hid_t       fapl = H5P_DEFAULT;

    if (driver && *driver) {
        /* Get the correct FAPL for the given driver */
        if((fapl=h5tools_get_fapl(driver,&drivernum,argc,argv))<0)
            goto done;

        H5E_BEGIN_TRY {
            fid = H5Fopen(fname, H5F_ACC_RDONLY, fapl);
        } H5E_END_TRY;

        if (fid == FAIL)
            goto done;

    } else {
        /* Try to open the file using each of the drivers */
        for (drivernum = 0; drivernum < NUM_DRIVERS; drivernum++) {
            /* Get the correct FAPL for the given driver */
            if((fapl=h5tools_get_fapl(drivernames[drivernum],NULL,argc,argv))<0)
                goto done;

            H5E_BEGIN_TRY {
                fid = H5Fopen(fname, H5F_ACC_RDONLY, fapl);
            } H5E_END_TRY;

            if (fid != FAIL)
                break;
            else {
                /* Close the FAPL */
                H5Pclose(fapl);
                fapl=H5P_DEFAULT;
            } /* end else */
        }
    }

    /* Save the driver name */
    if (drivername && drivername_size) {
        if (fid != FAIL) {
            strncpy(drivername, drivernames[drivernum], drivername_size);
            drivername[drivername_size - 1] = '\0';
        } else {
            /*no file opened*/
            drivername[0] = '\0';
        }
    }

done:
    if(fapl!=H5P_DEFAULT)
        H5Pclose(fapl);
    return fid;
}

/*-------------------------------------------------------------------------
 * Audience:    Public
 * Chapter:     H5Tools Library
 * Purpose:     Count the number of columns in a string.
 * Description:
 *      Count the number of columns in a string. This is the number of
 *      characters in the string not counting line-control characters.
 * Return:
 *      On success, returns the width of the string. Otherwise this function
 *      returns 0.
 * Programmer:
 *       Robb Matzke, Tuesday, April 27, 1999
 * Modifications:
 *-------------------------------------------------------------------------
 */
static size_t
h5tools_ncols(const char *s)
{
    register size_t i;
    
    for (i = 0; *s; s++)
        if (*s >= ' ')
            i++;

    return i;
}

/*-------------------------------------------------------------------------
 * Audience:    Public
 * Chapter:     H5Tools Library
 * Purpose:     Emit a simple prefix to STREAM.
 * Description:
 *      If /ctx->need_prefix/ is set then terminate the current line (if
 *      applicable), calculate the prefix string, and display it at the start
 *      of a line.
 * Return:
 *      None
 * Programmer:
 *      Robb Matzke, Monday, April 26, 1999
 * Modifications:
 *      Robb Matzke, 1999-09-29
 *	If a new prefix is printed then the current element number is set back
 *	to zero.
 *      pvn, 2004-07-08
 * Added support for printing array indices: 
 *  the indentation is printed before the prefix (printed one indentation
 *  level before) 
 *-------------------------------------------------------------------------
 */
static void
h5tools_simple_prefix(FILE *stream, const h5dump_t *info,
                      h5tools_context_t *ctx, hsize_t elmtno, int secnum)
{
    h5tools_str_t prefix;
    h5tools_str_t str; /*temporary for indentation */
    size_t templength = 0;
    int i, indentlevel = 0;
	
    if (!ctx->need_prefix)
	return;
 
    memset(&prefix, 0, sizeof(h5tools_str_t));
    memset(&str, 0, sizeof(h5tools_str_t));

    /* Terminate previous line, if any */
    if (ctx->cur_column) {
	    fputs(OPT(info->line_suf, ""), stream);
     putc('\n', stream);
	    fputs(OPT(info->line_sep, ""), stream);
    }

    /* Calculate new prefix */
    h5tools_str_prefix(&prefix, info, elmtno, ctx->ndims, ctx->p_min_idx,
                       ctx->p_max_idx);

    /* Write new prefix to output */
    if (ctx->indent_level >= 0) {
        indentlevel = ctx->indent_level;
    } else {
        /*
         * This is because sometimes we don't print out all the header
         * info for the data (like the tattr-2.ddl example). If that happens
         * the ctx->indent_level is negative so we need to skip the above and
         * just print out the default indent levels.
         */
	indentlevel = ctx->default_indent_level;
    }

    /* when printing array indices, print the indentation before the prefix
       the prefix is printed one indentation level before */
    if (info->pindex) {
     for (i = 0; i < indentlevel-1; i++){
      fputs(h5tools_str_fmt(&str, 0, info->line_indent), stream);
     }
    }

    if (elmtno == 0 && secnum == 0 && info->line_1st)
        fputs(h5tools_str_fmt(&prefix, 0, info->line_1st), stream);
    else if (secnum && info->line_cont)
        fputs(h5tools_str_fmt(&prefix, 0, info->line_cont), stream);
    else
        fputs(h5tools_str_fmt(&prefix, 0, info->line_pre), stream);

    templength = h5tools_str_len(&prefix);

    for (i = 0; i < indentlevel; i++){
        /*we already made the indent for the array indices case */
     if (!info->pindex) {
        fputs(h5tools_str_fmt(&prefix, 0, info->line_indent), stream);
        templength += h5tools_str_len(&prefix);
     }
     else {
      /*we cannot count the prefix for the array indices case */
      templength += h5tools_str_len(&str);
     }
    }

    ctx->cur_column = ctx->prev_prefix_len = templength;
    ctx->cur_elmt = 0;
    ctx->need_prefix = 0;

    /* Free string */
    h5tools_str_close(&prefix);
    h5tools_str_close(&str);
}

/*-------------------------------------------------------------------------
 * Audience:    Public
 * Chapter:     H5Tools Library
 * Purpose:     Prints NELMTS data elements to output STREAM.
 * Description:
 *      Prints some (NELMTS) data elements to output STREAM. The elements are
 *      stored in _MEM as type TYPE and are printed according to the format
 *      described in INFO. The CTX struct contains context information shared
 *      between calls to this function. The FLAGS is a bit field that
 *      indicates whether the data supplied in this call falls at the
 *      beginning or end of the total data to be printed (START_OF_DATA and
 *      END_OF_DATA).
 * Return:
 *      None
 * Programmer:
 *      Robb Matzke, Monday, April 26, 1999
 * Modifications:
 * 	Robb Matzke, 1999-06-04
 *	The `container' argument is the optional dataset for reference types.
 *
 * 	Robb Matzke, 1999-09-29
 *	Understands the `per_line' property which indicates that every Nth
 *	element should begin a new line.
 *
 *      Robb Matzke, LLNL, 2003-06-05
 *      Do not dereference the memory for a variable-length string here.
 *      Deref in h5tools_str_sprint() instead so recursive types are
 *      handled correctly.
 *-------------------------------------------------------------------------
 */
void
h5tools_dump_simple_data(FILE *stream, const h5dump_t *info, hid_t container,
                         h5tools_context_t *ctx/*in,out*/, unsigned flags,
                         hsize_t nelmts, hid_t type, void *_mem)
{
    unsigned char	*mem = (unsigned char*)_mem;
    hsize_t		i;		/*element counter		*/
    char		*s, *section;	/*a section of output		*/
    int			secnum;		/*section sequence number	*/
    size_t		size;		/*size of each datum		*/
    size_t		ncols = 80;	/*available output width	*/
    h5tools_str_t	buffer;		/*string into which to render	*/
    int			multiline;	/*datum was multiline		*/
    int                 elmt_counter = 0;/*counts the # elements printed.
                                          *I (ptl?) needed something that
                                          *isn't going to get reset when a new
                                          *line is formed. I'm going to use
                                          *this var to count elements and
                                          *break after we see a number equal
                                          *to the ctx->size_last_dim.   */

    /* Setup */
    memset(&buffer, 0, sizeof(h5tools_str_t));
    size = H5Tget_size(type);

    if (info->line_ncols > 0)
	ncols = info->line_ncols;

    h5tools_simple_prefix(stream, info, ctx, (hsize_t)0, 0);

    for (i = 0; i < nelmts; i++, ctx->cur_elmt++, elmt_counter++) {
        /* Render the element */
        h5tools_str_reset(&buffer);
        h5tools_str_sprint(&buffer, info, container, type, mem + i * size, ctx);

        if (i + 1 < nelmts || (flags & END_OF_DATA) == 0)
            h5tools_str_append(&buffer, "%s", OPT(info->elmt_suf1, ","));

        s = h5tools_str_fmt(&buffer, 0, "%s");

        /*
         * If the element would split on multiple lines if printed at our
         * current location...
         */
        if (info->line_multi_new == 1 &&
                (ctx->cur_column + h5tools_ncols(s) +
                 strlen(OPT(info->elmt_suf2, " ")) +
                 strlen(OPT(info->line_suf, ""))) > ncols) {
            if (ctx->prev_multiline) {
                /*
                 * ... and the previous element also occupied more than one
                 * line, then start this element at the beginning of a line.
                 */
                ctx->need_prefix = TRUE;
            } else if ((ctx->prev_prefix_len + h5tools_ncols(s) +
                    strlen(OPT(info->elmt_suf2, " ")) +
                    strlen(OPT(info->line_suf, ""))) <= ncols) {
                /* 
                 * ...but *could* fit on one line otherwise, then we
                 * should end the current line and start this element on its
                 * own line.
                 */
                ctx->need_prefix = TRUE;
            }
        }

        /*
         * We need to break after each row of a dimension---> we should
         * break at the end of the each last dimension well that is the
         * way the dumper did it before
         */
        if (info->arr_linebreak && ctx->cur_elmt) {
            if (ctx->size_last_dim && (ctx->cur_elmt % ctx->size_last_dim) == 0)
                ctx->need_prefix = TRUE;

            if ((hsize_t)elmt_counter == ctx->size_last_dim) {
                ctx->need_prefix = TRUE;
                elmt_counter = 0;
            }
        }

        /*
         * If the previous element occupied multiple lines and this element
         * is too long to fit on a line then start this element at the
         * beginning of the line.
         */
        if (info->line_multi_new == 1 && ctx->prev_multiline &&
                (ctx->cur_column + h5tools_ncols(s) +
                 strlen(OPT(info->elmt_suf2, " ")) +
                 strlen(OPT(info->line_suf, ""))) > ncols)
            ctx->need_prefix = TRUE;

        /*
         * If too many elements have already been printed then we need to
         * start a new line.
         */
        if (info->line_per_line > 0 && ctx->cur_elmt >= info->line_per_line)
            ctx->need_prefix = TRUE;
        
        /*
         * Each OPTIONAL_LINE_BREAK embedded in the rendered string can cause
         * the data to split across multiple lines.  We display the sections
         * one-at a time.
         */
        for (secnum = 0, multiline = 0;
                 (section = strtok(secnum ? NULL : s, OPTIONAL_LINE_BREAK));
                 secnum++) {
            /*
             * If the current section plus possible suffix and end-of-line
             * information would cause the output to wrap then we need to
             * start a new line.
             */

            /*
             * Added the info->skip_first because the dumper does not want
             * this check to happen for the first line
             */
            if ((!info->skip_first || i) &&
                    (ctx->cur_column + strlen(section) +
                     strlen(OPT(info->elmt_suf2, " ")) +
                     strlen(OPT(info->line_suf, ""))) > ncols)
                ctx->need_prefix = 1;

            /*
             * Print the prefix or separate the beginning of this element
             * from the previous element.
             */
            if (ctx->need_prefix) {
                if (secnum)
                    multiline++;

                h5tools_simple_prefix(stream, info, ctx, i, secnum);
            } else if ((i || ctx->continuation) && secnum == 0) {
                fputs(OPT(info->elmt_suf2, " "), stream);
                ctx->cur_column += strlen(OPT(info->elmt_suf2, " "));
            }
            
            /* Print the section */
            fputs(section, stream);
            ctx->cur_column += strlen(section);
        }

        ctx->prev_multiline = multiline;
    }

    h5tools_str_close(&buffer);
}

/*-------------------------------------------------------------------------
 * Audience:    Public
 * Chapter:     H5Tools Library
 * Purpose:     Dump out a subset of a dataset.
 * Description:
 *      Select a hyperslab from the dataset DSET using the parameters
 *      specified in SSET. Dump this out to STREAM.
 * Return:
 *      On success, return SUCCEED. Otherwise, the function returns FAIL.
 * Programmer:
 *      Bill Wendling, Wednesday, 07. March 2001
 * Modifications:
 *-------------------------------------------------------------------------
 */ 
static herr_t
h5tools_dump_simple_subset(FILE *stream, const h5dump_t *info, hid_t dset,
                           hid_t p_type, struct subset_t *sset,
                           int indentlevel)
{
    herr_t              ret;                    /*the value to return   */
    hid_t		f_space;		/*file data space	*/
    int			i;                      /*counters		*/
    hssize_t		zero = 0;               /*vector of zeros	*/
    unsigned int	flags;			/*buffer extent flags	*/
    hsize_t		total_size[H5S_MAX_RANK];/*total size of dataset*/

    /* Print info */
    h5tools_context_t	ctx;			/*print context		*/
    size_t		p_type_nbytes;		/*size of memory type	*/

    /* Stripmine info */
    hsize_t		sm_size[H5S_MAX_RANK];	/*stripmine size	*/
    hsize_t		sm_nbytes;		/*bytes per stripmine	*/
    hsize_t		sm_nelmts;		/*elements per stripmine*/
    unsigned char      *sm_buf = NULL;		/*buffer for raw data	*/
    hid_t		sm_space;		/*stripmine data space	*/

    hsize_t             count;

    ret = FAIL;     /* be pessimistic */
    f_space = H5Dget_space(dset);

    if (f_space == FAIL)
        goto done;

    /*
     * check that everything looks okay. the dimensionality must not be too
     * great and the dimensionality of the items selected for printing must
     * match the dimensionality of the dataset.
     */
    memset(&ctx, 0, sizeof(ctx));
    ctx.indent_level = indentlevel;
    ctx.need_prefix = 1;
    ctx.ndims = H5Sget_simple_extent_ndims(f_space);

    if ((size_t)ctx.ndims > NELMTS(sm_size))
        goto done_close;

    /* assume entire data space to be printed */
    if (ctx.ndims > 0)
        for (i = 0; i < ctx.ndims; i++)
            ctx.p_min_idx[i] = 0;

    H5Sget_simple_extent_dims(f_space, total_size, NULL);
	assert(total_size[ctx.ndims - 1]==(hsize_t)((int)(total_size[ctx.ndims - 1])));
    ctx.size_last_dim = (int)(total_size[ctx.ndims - 1]);

    count = sset->count[ctx.ndims - 1];
    sset->count[ctx.ndims - 1] = 1;

    for (; count > 0; sset->start[ctx.ndims - 1] += sset->stride[ctx.ndims - 1],
                      count--) {
        /* calculate the potential number of elements we're going to print */
        H5Sselect_hyperslab(f_space, H5S_SELECT_SET, 
        (hssize_t*)sset->start, 
        (hsize_t*)sset->stride,
        (hsize_t*)sset->count, 
        (hsize_t*)sset->block);
        sm_nelmts = H5Sget_select_npoints(f_space);

        /*
         * start (0, 0)
         * block (2, 2)
         * stride (15, 5)
         * count (4, 3)
         *
         * make:
         *
         * for up to "count" times.
         *
         * start (0, += stride[last_dim])
         * block (2, 2)
         * stride (15, 5)
         * count (4, 1)
         */

        if (sm_nelmts == 0) {
            /* nothing to print */
            ret = SUCCEED;
            goto done_close;
        }

        /*
         * determine the strip mine size and allocate a buffer. the strip mine is
         * a hyperslab whose size is manageable.
         */
        sm_nbytes = p_type_nbytes = H5Tget_size(p_type);

        if (ctx.ndims > 0)
            for (i = ctx.ndims; i > 0; --i) {
                sm_size[i - 1] = MIN(total_size[i - 1], H5TOOLS_BUFSIZE / sm_nbytes);
                sm_nbytes *= sm_size[i - 1];
                assert(sm_nbytes > 0);
            }

        assert(sm_nbytes == (hsize_t)((size_t)sm_nbytes)); /*check for overflow*/
        sm_buf = malloc((size_t)sm_nelmts * p_type_nbytes);
        sm_space = H5Screate_simple(1, &sm_nelmts, NULL);

        H5Sselect_hyperslab(sm_space, H5S_SELECT_SET, &zero, NULL, &sm_nelmts, NULL);

        /* Read the data */
        if (H5Dread(dset, p_type, sm_space, f_space, H5P_DEFAULT, sm_buf) < 0) {
            H5Sclose(f_space);
            H5Sclose(sm_space);
            free(sm_buf);
            return FAIL;
        }

        /* Print the data */
        flags = START_OF_DATA;

        if (count == 1)
            flags |= END_OF_DATA;

        for (i = 0; i < ctx.ndims; i++) {
            ctx.p_max_idx[i] = ctx.p_min_idx[i] + MIN(total_size[i], sm_size[i]);
        }

        h5tools_dump_simple_data(stream, info, dset, &ctx, flags, sm_nelmts,
                                 p_type, sm_buf);
        free(sm_buf);
        ctx.continuation++;
    }

    /* Terminate the output */
    if (ctx.cur_column) {
        fputs(OPT(info->line_suf, ""), stream);
        putc('\n', stream);
        fputs(OPT(info->line_sep, ""), stream);
    }

    ret = SUCCEED;

done_close:
    H5Sclose(f_space);
done:
    return ret;
}

/*-------------------------------------------------------------------------
 * Audience:    Public
 * Chapter:     H5Tools Library
 * Purpose:	Print some values from a dataset with a simple data space.
 * Description:
 *      This is a special case of h5tools_dump_dset(). This function only
 *      intended for dumping datasets -- it does strip mining and some other
 *      things which are unnecessary for smaller objects such as attributes
 *      (to print small objects like attributes simply read the attribute and
 *      call h5tools_dump_simple_mem()).
 * Return:
 *      On success, the function returns SUCCEED. Otherwise, the function
 *      returns FAIL.
 * Programmer:
 *      Robb Matzke, Thursday, July 23, 1998
 * Modifications:
 *-------------------------------------------------------------------------
 */ 
static int
h5tools_dump_simple_dset(FILE *stream, const h5dump_t *info, hid_t dset,
                         hid_t p_type, int indentlevel)
{
    hid_t		f_space;		/*file data space	*/
    hsize_t		elmtno;			/*counter		*/
    int			i;			/*counter		*/
    int			carry;			/*counter carry value	*/
    hssize_t		zero[8];		/*vector of zeros	*/
    unsigned int	flags;			/*buffer extent flags	*/
    hsize_t		total_size[H5S_MAX_RANK];/*total size of dataset*/

    /* Print info */
    h5tools_context_t	ctx;			/*print context		*/
    size_t		p_type_nbytes;		/*size of memory type	*/
    hsize_t		p_nelmts;		/*total selected elmts	*/

    /* Stripmine info */
    hsize_t		sm_size[H5S_MAX_RANK];	/*stripmine size	*/
    hsize_t		sm_nbytes;		/*bytes per stripmine	*/
    hsize_t		sm_nelmts;		/*elements per stripmine*/
    unsigned char      *sm_buf = NULL;		/*buffer for raw data	*/
    hid_t		sm_space;		/*stripmine data space	*/
    
    /* Hyperslab info */
    hssize_t		hs_offset[H5S_MAX_RANK];/*starting offset	*/
    hsize_t		hs_size[H5S_MAX_RANK];	/*size this pass	*/
    hsize_t		hs_nelmts;		/*elements in request	*/

    /* VL data special information */
    unsigned int        vl_data = 0;            /*contains VL datatypes */

    f_space = H5Dget_space(dset);

    if (f_space == FAIL)
        return FAIL;

    /*
     * Check that everything looks okay. The dimensionality must not be too
     * great and the dimensionality of the items selected for printing must
     * match the dimensionality of the dataset.
     */
    memset(&ctx, 0, sizeof(ctx));
    ctx.indent_level = indentlevel;
    ctx.need_prefix = 1;
    ctx.ndims = H5Sget_simple_extent_ndims(f_space);

    if ((size_t)ctx.ndims > NELMTS(sm_size)) {
        H5Sclose(f_space);
        return FAIL;
    }

    /* Assume entire data space to be printed */
    if (ctx.ndims > 0)
        for (i = 0; i < ctx.ndims; i++)
            ctx.p_min_idx[i] = 0;

    H5Sget_simple_extent_dims(f_space, total_size, NULL);

    /* calculate the number of elements we're going to print */
    p_nelmts = 1;

    if (ctx.ndims > 0) {
        for (i = 0; i < ctx.ndims; i++)
            p_nelmts *= total_size[i];
        ctx.size_last_dim = (total_size[ctx.ndims - 1]);
    } /* end if */
    else
        ctx.size_last_dim = 0;
 
    if (p_nelmts == 0) {
        /* nothing to print */
        H5Sclose(f_space);
        return SUCCEED;
    }

    /* Check if we have VL data in the dataset's datatype */
    if (H5Tdetect_class(p_type, H5T_VLEN) == TRUE)
        vl_data = TRUE;

    /*
     * Determine the strip mine size and allocate a buffer. The strip mine is
     * a hyperslab whose size is manageable.
     */
    sm_nbytes = p_type_nbytes = H5Tget_size(p_type);

    if (ctx.ndims > 0) {
        for (i = ctx.ndims; i > 0; --i) {
            sm_size[i - 1] = MIN(total_size[i - 1], H5TOOLS_BUFSIZE / sm_nbytes);
            sm_nbytes *= sm_size[i - 1];
            assert(sm_nbytes > 0);
        }
    }

    assert(sm_nbytes == (hsize_t)((size_t)sm_nbytes)); /*check for overflow*/
    sm_buf = malloc((size_t)sm_nbytes);
            
    sm_nelmts = sm_nbytes / p_type_nbytes;
    sm_space = H5Screate_simple(1, &sm_nelmts, NULL);

    /* The stripmine loop */
    memset(hs_offset, 0, sizeof hs_offset);
    memset(zero, 0, sizeof zero);

    for (elmtno = 0; elmtno < p_nelmts; elmtno += hs_nelmts) {
        /* Calculate the hyperslab size */
        if (ctx.ndims > 0) {
            for (i = 0, hs_nelmts = 1; i < ctx.ndims; i++) {
                hs_size[i] = MIN(total_size[i] - hs_offset[i], sm_size[i]);
                ctx.p_max_idx[i] = ctx.p_min_idx[i] + hs_size[i];
                hs_nelmts *= hs_size[i];
            }

            H5Sselect_hyperslab(f_space, H5S_SELECT_SET, hs_offset, NULL,
                                hs_size, NULL);
            H5Sselect_hyperslab(sm_space, H5S_SELECT_SET, zero, NULL,
                                &hs_nelmts, NULL);
        } else {
            H5Sselect_all(f_space);
            H5Sselect_all(sm_space);
            hs_nelmts = 1;
        }

        /* Read the data */
        if (H5Dread(dset, p_type, sm_space, f_space, H5P_DEFAULT, sm_buf) < 0) {
            H5Sclose(f_space);
            H5Sclose(sm_space);
            free(sm_buf);
            return FAIL;
        }

        /* Print the data */
        flags = (elmtno == 0) ? START_OF_DATA : 0;
        flags |= ((elmtno + hs_nelmts) >= p_nelmts) ? END_OF_DATA : 0;
        h5tools_dump_simple_data(stream, info, dset, &ctx, flags, hs_nelmts,
                             p_type, sm_buf);

        /* Reclaim any VL memory, if necessary */
        if(vl_data)
            H5Dvlen_reclaim(p_type, sm_space, H5P_DEFAULT, sm_buf);

        /* Calculate the next hyperslab offset */
        for (i = ctx.ndims, carry = 1; i > 0 && carry; --i) {
            ctx.p_min_idx[i - 1] = ctx.p_max_idx[i - 1];
            hs_offset[i - 1] += hs_size[i - 1];

            if (hs_offset[i - 1] == (hssize_t)total_size[i - 1])
                hs_offset[i - 1] = 0;
            else
                carry = 0;
        }

        ctx.continuation++;
    }

    /* Terminate the output */
    if (ctx.cur_column) {
        fputs(OPT(info->line_suf, ""), stream);
        putc('\n', stream);
        fputs(OPT(info->line_sep, ""), stream);
    }

    H5Sclose(sm_space);
    H5Sclose(f_space);
    
    free(sm_buf);

    return SUCCEED;
}

/*-------------------------------------------------------------------------
 * Function:	h5tools_dump_simple_mem
 *
 * Purpose:	Print some values from memory with a simple data space.
 *		This is a special case of h5tools_dump_mem().
 *
 * Return:	Success:    SUCCEED
 *
 *		Failure:    FAIL
 *
 * Programmer:	Robb Matzke
 *              Thursday, July 23, 1998
 *
 * Modifications:
 *
 *-------------------------------------------------------------------------
 */
static int
h5tools_dump_simple_mem(FILE *stream, const h5dump_t *info, hid_t obj_id,
                        hid_t type, hid_t space, void *mem, int indentlevel)
{
    int			i;			/*counters		*/
    hsize_t		nelmts;			/*total selected elmts	*/
    h5tools_context_t	ctx;			/*printing context	*/

    /*
     * Check that everything looks okay.  The dimensionality must not be too
     * great and the dimensionality of the items selected for printing must
     * match the dimensionality of the dataset.
     */
    memset(&ctx, 0, sizeof(ctx));
    ctx.ndims = H5Sget_simple_extent_ndims(space);

    if ((size_t)ctx.ndims > NELMTS(ctx.p_min_idx))
        return FAIL;

    ctx.indent_level = indentlevel;
    ctx.need_prefix = 1;
    
    /* Assume entire data space to be printed */
    for (i = 0; i < ctx.ndims; i++)
        ctx.p_min_idx[i] = 0;

    H5Sget_simple_extent_dims(space, ctx.p_max_idx, NULL);

    for (i = 0, nelmts = 1; ctx.ndims != 0 && i < ctx.ndims; i++)
        nelmts *= ctx.p_max_idx[i] - ctx.p_min_idx[i];
    
    if (nelmts == 0)
        return SUCCEED; /*nothing to print*/
    if(ctx.ndims>0) {
        assert(ctx.p_max_idx[ctx.ndims - 1]==(hsize_t)((int)ctx.p_max_idx[ctx.ndims - 1]));
        ctx.size_last_dim = (int)(ctx.p_max_idx[ctx.ndims - 1]);
    } /* end if */
    else
        ctx.size_last_dim = 0;

    /* Print it */
    h5tools_dump_simple_data(stream, info, obj_id, &ctx,
                             START_OF_DATA | END_OF_DATA, nelmts, type, mem);

    /* Terminate the output */
    if (ctx.cur_column) {
        fputs(OPT(info->line_suf, ""), stream);
        putc('\n', stream);
        fputs(OPT(info->line_sep, ""), stream);
    }
 
    return SUCCEED;
}

/*-------------------------------------------------------------------------
 * Function:	h5tools_dump_dset
 *
 * Purpose:	Print some values from a dataset DSET to the file STREAM
 *		after converting all types to P_TYPE (which should be a
 *		native type).  If P_TYPE is a negative value then it will be
 *		computed from the dataset type using only native types.
 *
 * Note:	This function is intended only for datasets since it does
 *		some things like strip mining which are unnecessary for
 *		smaller objects such as attributes. The easiest way to print
 *		small objects is to read the object into memory and call
 *		h5tools_dump_mem().
 *
 * Return:	Success:    SUCCEED
 *
 *		Failure:    FAIL
 *
 * Programmer:	Robb Matzke
 *              Thursday, July 23, 1998
 *
 * Modifications:
 * 		Robb Matzke, 1999-06-07
 *		If info->raw is set then the memory datatype will be the same
 *		as the file datatype.
 *
 *		Bill Wendling, 2001-02-27
 *		Renamed to ``h5tools_dump_dset'' and added the subsetting
 *		parameter.
 *
 *-------------------------------------------------------------------------
 */
int
h5tools_dump_dset(FILE *stream, const h5dump_t *info, hid_t dset, hid_t _p_type,
                  struct subset_t *sset, int indentlevel)
{
    hid_t     f_space;
    hid_t     p_type = _p_type;
    hid_t     f_type;
    H5S_class_t space_type;
    int       status = FAIL;
    h5dump_t  info_dflt;

    /* Use default values */
    if (!stream)
        stream = stdout;

    if (!info) {
        memset(&info_dflt, 0, sizeof info_dflt);
        info = &info_dflt;
    }

    if (p_type < 0) {
        f_type = H5Dget_type(dset);

        if (info->raw)
            p_type = H5Tcopy(f_type);
        else
            p_type = h5tools_get_native_type(f_type);

        H5Tclose(f_type);

        if (p_type < 0)
            goto done;
    }

    /* Check the data space */
    f_space = H5Dget_space(dset);

    space_type = H5Sget_simple_extent_type(f_space);

    /* Print the data */
    if (space_type == H5S_SIMPLE || space_type == H5S_SCALAR) {
        if (!sset)
            status = h5tools_dump_simple_dset(rawdatastream, info, dset, p_type,
                                              indentlevel);
        else
            status = h5tools_dump_simple_subset(rawdatastream, info, dset, p_type,
                                                sset, indentlevel);
    } else /* space is H5S_NULL */
        status = SUCCEED;

    /* Close the dataspace */
    H5Sclose(f_space);

done:
    if (p_type != _p_type)
        H5Tclose(p_type);

    return status;
}

/*-------------------------------------------------------------------------
 * Function:	h5tools_dump_mem
 *
 * Purpose:	Displays the data contained in MEM. MEM must have the
 *		specified data TYPE and SPACE.  Currently only simple data
 *		spaces are allowed and only the `all' selection.
 *
 * Return:	Success:    SUCCEED
 *
 *		Failure:    FAIL
 *
 * Programmer:	Robb Matzke
 *              Wednesday, January 20, 1999
 *
 * Modifications:
 *
 *-------------------------------------------------------------------------
 */
int
h5tools_dump_mem(FILE *stream, const h5dump_t *info, hid_t obj_id, hid_t type,
                 hid_t space, void *mem, int indentlevel)
{
    h5dump_t    info_dflt;
    
    /* Use default values */
    if (!stream)
	stream = stdout;

    if (!info) {
	memset(&info_dflt, 0, sizeof(info_dflt));
	info = &info_dflt;
    }

    /* Check the data space */
    if (H5Sis_simple(space) <= 0)
	return -1;

    return h5tools_dump_simple_mem(stream, info, obj_id, type, space, mem,
                                   indentlevel);
}