1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127
1128
1129
1130
1131
1132
1133
1134
1135
1136
1137
1138
1139
1140
1141
1142
1143
1144
1145
1146
1147
1148
1149
1150
1151
1152
1153
1154
1155
1156
1157
1158
1159
1160
1161
1162
1163
1164
1165
1166
1167
1168
1169
1170
1171
1172
1173
1174
1175
1176
1177
1178
1179
1180
1181
1182
1183
1184
1185
1186
1187
1188
|
#! /bin/sh
#
# Copyright by The HDF Group.
# Copyright by the Board of Trustees of the University of Illinois.
# All rights reserved.
#
# This file is part of HDF5. The full HDF5 copyright notice, including
# terms governing use, modification, and redistribution, is contained in
# the COPYING file, which can be found at the root of the source code
# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
# If you do not have access to either file, you may request a copy from
# help@hdfgroup.org.
#
# Tests for the h5diff tool
#
# Modification:
# Albert Cheng, 2005/08/17
# Added the SKIP feature.
# Albert Cheng, 2005/2/3
# Added -p option for parallel h5diff tests.
# Pedro Vicente Nunes:
# 10/25/2005: Added test #9
# 11/27/2006: Added test #10, #11
# Jonathan Kim:
# Improved to use single line
# Improved to check exit code (only serial mode, not necessary for parallel)
# Added test 400 - 425 (links with --follow-symlinks option)
# Added test 450 - 459 (dangling links)
srcdir=@srcdir@
TESTNAME=h5diff
EXIT_SUCCESS=0
EXIT_FAILURE=1
H5DIFF=../../src/h5diff/h5diff # The tool name
H5DIFF_BIN=`pwd`/$H5DIFF # The path of the tool binary
RM='rm -rf'
CMP='cmp -s'
DIFF='diff -c'
CP='cp'
DIRNAME='dirname'
LS='ls'
AWK='awk'
nerrors=0
verbose=yes
h5haveexitcode=yes # default is yes
pmode= # default to run h5diff tests
mydomainname=`domainname 2>/dev/null`
# source dirs
SRC_TOOLS="$srcdir/../.."
SRC_TOOLS_TESTFILES="$SRC_TOOLS/testfiles"
# testfiles source dirs for tools
SRC_H5LS_TESTFILES="$SRC_TOOLS_TESTFILES"
SRC_H5DUMP_TESTFILES="$SRC_TOOLS_TESTFILES"
SRC_H5DIFF_TESTFILES="$SRC_TOOLS/test/h5diff/testfiles"
SRC_H5COPY_TESTFILES="$SRC_TOOLS/test/h5copy/testfiles"
SRC_H5REPACK_TESTFILES="$SRC_TOOLS/test/h5repack/testfiles"
SRC_H5JAM_TESTFILES="$SRC_TOOLS/test/h5jam/testfiles"
SRC_H5STAT_TESTFILES="$SRC_TOOLS/test/h5stat/testfiles"
SRC_H5IMPORT_TESTFILES="$SRC_TOOLS/test/h5import/testfiles"
TESTDIR=./testfiles
test -d $TESTDIR || mkdir $TESTDIR
######################################################################
# test files
# --------------------------------------------------------------------
# All the test files copy from source directory to test directory
# NOTE: Keep this framework to add/remove test files.
# Any test files from other tools can be used in this framework.
# This list are also used for checking exist.
# Comment '#' without space can be used.
# --------------------------------------------------------------------
LIST_HDF5_TEST_FILES="
$SRC_H5DIFF_TESTFILES/h5diff_basic1.h5
$SRC_H5DIFF_TESTFILES/h5diff_basic2.h5
$SRC_H5DIFF_TESTFILES/h5diff_types.h5
$SRC_H5DIFF_TESTFILES/h5diff_dtypes.h5
$SRC_H5DIFF_TESTFILES/h5diff_attr1.h5
$SRC_H5DIFF_TESTFILES/h5diff_attr2.h5
$SRC_H5DIFF_TESTFILES/h5diff_dset1.h5
$SRC_H5DIFF_TESTFILES/h5diff_dset2.h5
$SRC_H5DIFF_TESTFILES/h5diff_hyper1.h5
$SRC_H5DIFF_TESTFILES/h5diff_hyper2.h5
$SRC_H5DIFF_TESTFILES/h5diff_empty.h5
$SRC_H5DIFF_TESTFILES/h5diff_links.h5
$SRC_H5DIFF_TESTFILES/h5diff_softlinks.h5
$SRC_H5DIFF_TESTFILES/h5diff_linked_softlink.h5
$SRC_H5DIFF_TESTFILES/h5diff_extlink_src.h5
$SRC_H5DIFF_TESTFILES/h5diff_extlink_trg.h5
$SRC_H5DIFF_TESTFILES/h5diff_ext2softlink_src.h5
$SRC_H5DIFF_TESTFILES/h5diff_ext2softlink_trg.h5
$SRC_H5DIFF_TESTFILES/h5diff_dset_zero_dim_size1.h5
$SRC_H5DIFF_TESTFILES/h5diff_dset_zero_dim_size2.h5
$SRC_H5DIFF_TESTFILES/h5diff_danglelinks1.h5
$SRC_H5DIFF_TESTFILES/h5diff_danglelinks2.h5
$SRC_H5DIFF_TESTFILES/h5diff_grp_recurse1.h5
$SRC_H5DIFF_TESTFILES/h5diff_grp_recurse2.h5
$SRC_H5DIFF_TESTFILES/h5diff_grp_recurse_ext1.h5
$SRC_H5DIFF_TESTFILES/h5diff_grp_recurse_ext2-1.h5
$SRC_H5DIFF_TESTFILES/h5diff_grp_recurse_ext2-2.h5
$SRC_H5DIFF_TESTFILES/h5diff_grp_recurse_ext2-3.h5
$SRC_H5DIFF_TESTFILES/h5diff_exclude1-1.h5
$SRC_H5DIFF_TESTFILES/h5diff_exclude1-2.h5
$SRC_H5DIFF_TESTFILES/h5diff_exclude2-1.h5
$SRC_H5DIFF_TESTFILES/h5diff_exclude2-2.h5
$SRC_H5DIFF_TESTFILES/h5diff_exclude3-1.h5
$SRC_H5DIFF_TESTFILES/h5diff_exclude3-2.h5
$SRC_H5DIFF_TESTFILES/h5diff_comp_vl_strs.h5
$SRC_H5DIFF_TESTFILES/compounds_array_vlen1.h5
$SRC_H5DIFF_TESTFILES/compounds_array_vlen2.h5
$SRC_H5DIFF_TESTFILES/h5diff_attr_v_level1.h5
$SRC_H5DIFF_TESTFILES/h5diff_attr_v_level2.h5
$SRC_H5DIFF_TESTFILES/h5diff_enum_invalid_values.h5
$SRC_H5DIFF_TESTFILES/non_comparables1.h5
$SRC_H5DIFF_TESTFILES/non_comparables2.h5
$SRC_H5DIFF_TESTFILES/tmpSingleSiteBethe.reference.h5
$SRC_H5DIFF_TESTFILES/tmpSingleSiteBethe.output.h5
$SRC_H5DIFF_TESTFILES/diff_strings1.h5
$SRC_H5DIFF_TESTFILES/diff_strings2.h5
$SRC_TOOLS_TESTFILES/tvlstr.h5
"
LIST_HDF5_VDS_TEST_FILES="
$SRC_TOOLS_TESTFILES/vds/1_a.h5
$SRC_TOOLS_TESTFILES/vds/1_b.h5
$SRC_TOOLS_TESTFILES/vds/1_c.h5
$SRC_TOOLS_TESTFILES/vds/1_d.h5
$SRC_TOOLS_TESTFILES/vds/1_e.h5
$SRC_TOOLS_TESTFILES/vds/1_f.h5
$SRC_TOOLS_TESTFILES/vds/1_vds.h5
$SRC_TOOLS_TESTFILES/vds/2_a.h5
$SRC_TOOLS_TESTFILES/vds/2_b.h5
$SRC_TOOLS_TESTFILES/vds/2_c.h5
$SRC_TOOLS_TESTFILES/vds/2_d.h5
$SRC_TOOLS_TESTFILES/vds/2_e.h5
$SRC_TOOLS_TESTFILES/vds/2_vds.h5
$SRC_TOOLS_TESTFILES/vds/3_1_vds.h5
$SRC_TOOLS_TESTFILES/vds/3_2_vds.h5
$SRC_TOOLS_TESTFILES/vds/4_0.h5
$SRC_TOOLS_TESTFILES/vds/4_1.h5
$SRC_TOOLS_TESTFILES/vds/4_2.h5
$SRC_TOOLS_TESTFILES/vds/4_vds.h5
$SRC_TOOLS_TESTFILES/vds/5_a.h5
$SRC_TOOLS_TESTFILES/vds/5_b.h5
$SRC_TOOLS_TESTFILES/vds/5_c.h5
$SRC_TOOLS_TESTFILES/vds/5_vds.h5
"
LIST_OTHER_TEST_FILES="
$SRC_H5DIFF_TESTFILES/h5diff_10.txt
$SRC_H5DIFF_TESTFILES/h5diff_100.txt
$SRC_H5DIFF_TESTFILES/h5diff_101.txt
$SRC_H5DIFF_TESTFILES/h5diff_102.txt
$SRC_H5DIFF_TESTFILES/h5diff_103.txt
$SRC_H5DIFF_TESTFILES/h5diff_104.txt
$SRC_H5DIFF_TESTFILES/h5diff_11.txt
$SRC_H5DIFF_TESTFILES/h5diff_12.txt
$SRC_H5DIFF_TESTFILES/h5diff_13.txt
$SRC_H5DIFF_TESTFILES/h5diff_14.txt
$SRC_H5DIFF_TESTFILES/h5diff_15.txt
$SRC_H5DIFF_TESTFILES/h5diff_16_1.txt
$SRC_H5DIFF_TESTFILES/h5diff_16_2.txt
$SRC_H5DIFF_TESTFILES/h5diff_16_3.txt
$SRC_H5DIFF_TESTFILES/h5diff_17.txt
$SRC_H5DIFF_TESTFILES/h5diff_171.txt
$SRC_H5DIFF_TESTFILES/h5diff_172.txt
$SRC_H5DIFF_TESTFILES/h5diff_18_1.txt
$SRC_H5DIFF_TESTFILES/h5diff_18.txt
$SRC_H5DIFF_TESTFILES/h5diff_20.txt
$SRC_H5DIFF_TESTFILES/h5diff_200.txt
$SRC_H5DIFF_TESTFILES/h5diff_201.txt
$SRC_H5DIFF_TESTFILES/h5diff_202.txt
$SRC_H5DIFF_TESTFILES/h5diff_203.txt
$SRC_H5DIFF_TESTFILES/h5diff_204.txt
$SRC_H5DIFF_TESTFILES/h5diff_205.txt
$SRC_H5DIFF_TESTFILES/h5diff_206.txt
$SRC_H5DIFF_TESTFILES/h5diff_207.txt
$SRC_H5DIFF_TESTFILES/h5diff_208.txt
$SRC_H5DIFF_TESTFILES/h5diff_220.txt
$SRC_H5DIFF_TESTFILES/h5diff_221.txt
$SRC_H5DIFF_TESTFILES/h5diff_222.txt
$SRC_H5DIFF_TESTFILES/h5diff_223.txt
$SRC_H5DIFF_TESTFILES/h5diff_224.txt
$SRC_H5DIFF_TESTFILES/h5diff_21.txt
$SRC_H5DIFF_TESTFILES/h5diff_22.txt
$SRC_H5DIFF_TESTFILES/h5diff_23.txt
$SRC_H5DIFF_TESTFILES/h5diff_24.txt
$SRC_H5DIFF_TESTFILES/h5diff_25.txt
$SRC_H5DIFF_TESTFILES/h5diff_26.txt
$SRC_H5DIFF_TESTFILES/h5diff_27.txt
$SRC_H5DIFF_TESTFILES/h5diff_28.txt
$SRC_H5DIFF_TESTFILES/h5diff_30.txt
$SRC_H5DIFF_TESTFILES/h5diff_300.txt
$SRC_H5DIFF_TESTFILES/h5diff_400.txt
$SRC_H5DIFF_TESTFILES/h5diff_401.txt
$SRC_H5DIFF_TESTFILES/h5diff_402.txt
$SRC_H5DIFF_TESTFILES/h5diff_403.txt
$SRC_H5DIFF_TESTFILES/h5diff_404.txt
$SRC_H5DIFF_TESTFILES/h5diff_405.txt
$SRC_H5DIFF_TESTFILES/h5diff_406.txt
$SRC_H5DIFF_TESTFILES/h5diff_407.txt
$SRC_H5DIFF_TESTFILES/h5diff_408.txt
$SRC_H5DIFF_TESTFILES/h5diff_409.txt
$SRC_H5DIFF_TESTFILES/h5diff_410.txt
$SRC_H5DIFF_TESTFILES/h5diff_411.txt
$SRC_H5DIFF_TESTFILES/h5diff_412.txt
$SRC_H5DIFF_TESTFILES/h5diff_413.txt
$SRC_H5DIFF_TESTFILES/h5diff_414.txt
$SRC_H5DIFF_TESTFILES/h5diff_415.txt
$SRC_H5DIFF_TESTFILES/h5diff_416.txt
$SRC_H5DIFF_TESTFILES/h5diff_417.txt
$SRC_H5DIFF_TESTFILES/h5diff_418.txt
$SRC_H5DIFF_TESTFILES/h5diff_419.txt
$SRC_H5DIFF_TESTFILES/h5diff_420.txt
$SRC_H5DIFF_TESTFILES/h5diff_421.txt
$SRC_H5DIFF_TESTFILES/h5diff_422.txt
$SRC_H5DIFF_TESTFILES/h5diff_423.txt
$SRC_H5DIFF_TESTFILES/h5diff_424.txt
$SRC_H5DIFF_TESTFILES/h5diff_425.txt
$SRC_H5DIFF_TESTFILES/h5diff_450.txt
$SRC_H5DIFF_TESTFILES/h5diff_451.txt
$SRC_H5DIFF_TESTFILES/h5diff_452.txt
$SRC_H5DIFF_TESTFILES/h5diff_453.txt
$SRC_H5DIFF_TESTFILES/h5diff_454.txt
$SRC_H5DIFF_TESTFILES/h5diff_455.txt
$SRC_H5DIFF_TESTFILES/h5diff_456.txt
$SRC_H5DIFF_TESTFILES/h5diff_457.txt
$SRC_H5DIFF_TESTFILES/h5diff_458.txt
$SRC_H5DIFF_TESTFILES/h5diff_459.txt
$SRC_H5DIFF_TESTFILES/h5diff_465.txt
$SRC_H5DIFF_TESTFILES/h5diff_466.txt
$SRC_H5DIFF_TESTFILES/h5diff_467.txt
$SRC_H5DIFF_TESTFILES/h5diff_468.txt
$SRC_H5DIFF_TESTFILES/h5diff_469.txt
$SRC_H5DIFF_TESTFILES/h5diff_471.txt
$SRC_H5DIFF_TESTFILES/h5diff_472.txt
$SRC_H5DIFF_TESTFILES/h5diff_473.txt
$SRC_H5DIFF_TESTFILES/h5diff_474.txt
$SRC_H5DIFF_TESTFILES/h5diff_475.txt
$SRC_H5DIFF_TESTFILES/h5diff_480.txt
$SRC_H5DIFF_TESTFILES/h5diff_481.txt
$SRC_H5DIFF_TESTFILES/h5diff_482.txt
$SRC_H5DIFF_TESTFILES/h5diff_483.txt
$SRC_H5DIFF_TESTFILES/h5diff_484.txt
$SRC_H5DIFF_TESTFILES/h5diff_485.txt
$SRC_H5DIFF_TESTFILES/h5diff_486.txt
$SRC_H5DIFF_TESTFILES/h5diff_487.txt
$SRC_H5DIFF_TESTFILES/h5diff_50.txt
$SRC_H5DIFF_TESTFILES/h5diff_51.txt
$SRC_H5DIFF_TESTFILES/h5diff_52.txt
$SRC_H5DIFF_TESTFILES/h5diff_53.txt
$SRC_H5DIFF_TESTFILES/h5diff_54.txt
$SRC_H5DIFF_TESTFILES/h5diff_55.txt
$SRC_H5DIFF_TESTFILES/h5diff_56.txt
$SRC_H5DIFF_TESTFILES/h5diff_57.txt
$SRC_H5DIFF_TESTFILES/h5diff_58.txt
$SRC_H5DIFF_TESTFILES/h5diff_59.txt
$SRC_H5DIFF_TESTFILES/h5diff_500.txt
$SRC_H5DIFF_TESTFILES/h5diff_501.txt
$SRC_H5DIFF_TESTFILES/h5diff_502.txt
$SRC_H5DIFF_TESTFILES/h5diff_503.txt
$SRC_H5DIFF_TESTFILES/h5diff_504.txt
$SRC_H5DIFF_TESTFILES/h5diff_505.txt
$SRC_H5DIFF_TESTFILES/h5diff_506.txt
$SRC_H5DIFF_TESTFILES/h5diff_507.txt
$SRC_H5DIFF_TESTFILES/h5diff_508.txt
$SRC_H5DIFF_TESTFILES/h5diff_509.txt
$SRC_H5DIFF_TESTFILES/h5diff_510.txt
$SRC_H5DIFF_TESTFILES/h5diff_511.txt
$SRC_H5DIFF_TESTFILES/h5diff_512.txt
$SRC_H5DIFF_TESTFILES/h5diff_513.txt
$SRC_H5DIFF_TESTFILES/h5diff_514.txt
$SRC_H5DIFF_TESTFILES/h5diff_515.txt
$SRC_H5DIFF_TESTFILES/h5diff_516.txt
$SRC_H5DIFF_TESTFILES/h5diff_517.txt
$SRC_H5DIFF_TESTFILES/h5diff_518.txt
$SRC_H5DIFF_TESTFILES/h5diff_530.txt
$SRC_H5DIFF_TESTFILES/h5diff_540.txt
$SRC_H5DIFF_TESTFILES/h5diff_60.txt
$SRC_H5DIFF_TESTFILES/h5diff_61.txt
$SRC_H5DIFF_TESTFILES/h5diff_62.txt
$SRC_H5DIFF_TESTFILES/h5diff_63.txt
$SRC_H5DIFF_TESTFILES/h5diff_600.txt
$SRC_H5DIFF_TESTFILES/h5diff_601.txt
$SRC_H5DIFF_TESTFILES/h5diff_603.txt
$SRC_H5DIFF_TESTFILES/h5diff_604.txt
$SRC_H5DIFF_TESTFILES/h5diff_605.txt
$SRC_H5DIFF_TESTFILES/h5diff_606.txt
$SRC_H5DIFF_TESTFILES/h5diff_607.txt
$SRC_H5DIFF_TESTFILES/h5diff_608.txt
$SRC_H5DIFF_TESTFILES/h5diff_609.txt
$SRC_H5DIFF_TESTFILES/h5diff_610.txt
$SRC_H5DIFF_TESTFILES/h5diff_612.txt
$SRC_H5DIFF_TESTFILES/h5diff_613.txt
$SRC_H5DIFF_TESTFILES/h5diff_614.txt
$SRC_H5DIFF_TESTFILES/h5diff_615.txt
$SRC_H5DIFF_TESTFILES/h5diff_616.txt
$SRC_H5DIFF_TESTFILES/h5diff_617.txt
$SRC_H5DIFF_TESTFILES/h5diff_618.txt
$SRC_H5DIFF_TESTFILES/h5diff_619.txt
$SRC_H5DIFF_TESTFILES/h5diff_621.txt
$SRC_H5DIFF_TESTFILES/h5diff_622.txt
$SRC_H5DIFF_TESTFILES/h5diff_623.txt
$SRC_H5DIFF_TESTFILES/h5diff_624.txt
$SRC_H5DIFF_TESTFILES/h5diff_625.txt
$SRC_H5DIFF_TESTFILES/h5diff_626.txt
$SRC_H5DIFF_TESTFILES/h5diff_627.txt
$SRC_H5DIFF_TESTFILES/h5diff_628.txt
$SRC_H5DIFF_TESTFILES/h5diff_629.txt
$SRC_H5DIFF_TESTFILES/h5diff_630.txt
$SRC_H5DIFF_TESTFILES/h5diff_631.txt
$SRC_H5DIFF_TESTFILES/h5diff_640.txt
$SRC_H5DIFF_TESTFILES/h5diff_641.txt
$SRC_H5DIFF_TESTFILES/h5diff_642.txt
$SRC_H5DIFF_TESTFILES/h5diff_643.txt
$SRC_H5DIFF_TESTFILES/h5diff_644.txt
$SRC_H5DIFF_TESTFILES/h5diff_645.txt
$SRC_H5DIFF_TESTFILES/h5diff_646.txt
$SRC_H5DIFF_TESTFILES/h5diff_70.txt
$SRC_H5DIFF_TESTFILES/h5diff_700.txt
$SRC_H5DIFF_TESTFILES/h5diff_701.txt
$SRC_H5DIFF_TESTFILES/h5diff_702.txt
$SRC_H5DIFF_TESTFILES/h5diff_703.txt
$SRC_H5DIFF_TESTFILES/h5diff_704.txt
$SRC_H5DIFF_TESTFILES/h5diff_705.txt
$SRC_H5DIFF_TESTFILES/h5diff_706.txt
$SRC_H5DIFF_TESTFILES/h5diff_707.txt
$SRC_H5DIFF_TESTFILES/h5diff_708.txt
$SRC_H5DIFF_TESTFILES/h5diff_709.txt
$SRC_H5DIFF_TESTFILES/h5diff_710.txt
$SRC_H5DIFF_TESTFILES/h5diff_80.txt
$SRC_H5DIFF_TESTFILES/h5diff_90.txt
$SRC_H5DIFF_TESTFILES/h5diff_8625.txt
$SRC_H5DIFF_TESTFILES/h5diff_tmp2.txt
$SRC_H5DIFF_TESTFILES/h5diff_v1.txt
$SRC_H5DIFF_TESTFILES/h5diff_v2.txt
$SRC_H5DIFF_TESTFILES/h5diff_v3.txt
$SRC_H5DIFF_TESTFILES/h5diff_vlstr.txt
"
#
# copy test files and expected output files from source dirs to test dir
#
COPY_TESTFILES="$LIST_HDF5_TEST_FILES $LIST_HDF5_VDS_TEST_FILES $LIST_OTHER_TEST_FILES $LIST_HDF5_TEST_FILES_XML $LIST_OTHER_TEST_FILES_XML"
COPY_TESTFILES_TO_TESTDIR()
{
# copy test files. Used -f to make sure get a new copy
for tstfile in $COPY_TESTFILES
do
# ignore '#' comment
echo $tstfile | tr -d ' ' | grep '^#' > /dev/null
RET=$?
if [ $RET -eq 1 ]; then
# skip cp if srcdir is same as destdir
# this occurs when build/test performed in source dir and
# make cp fail
SDIR=`$DIRNAME $tstfile`
INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'`
INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'`
if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then
$CP -f $tstfile $TESTDIR
if [ $? -ne 0 ]; then
echo "Error: FAILED to copy $tstfile ."
# Comment out this to CREATE expected file
exit $EXIT_FAILURE
fi
fi
fi
done
}
CLEAN_TESTFILES_AND_TESTDIR()
{
# skip rm if srcdir is same as destdir
# this occurs when build/test performed in source dir and
# make cp fail
SDIR=$SRC_H5DIFF_TESTFILES
INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'`
INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'`
if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then
$RM $TESTDIR
else
# files in $LIST_HDF5_VDS_TEST_FILES are copied in from a different
# directory, so when srcdir is the same as destdir and $TESTDIR is
# not deleted, the copy n $TESTDIR of each file from
# $LIST_HDF5_VDS_TEST_FILES will need to be deleted.
for tstfile in $LIST_HDF5_VDS_TEST_FILES
do
# ignore '#' comment
echo $tstfile | tr -d ' ' | grep '^#' > /dev/null
RET=$?
if [ $RET -eq 1 ]; then
fname=`basename $tstfile`
rm $TESTDIR/$fname
fi
done
fi
}
# Parse option
# -p run ph5diff tests
# -h print help page
while [ $# -gt 0 ]; do
case "$1" in
-p) # reset the tool name and bin to run ph5diff tests
TESTNAME=ph5diff
H5DIFF=../../src/h5diff/ph5diff # The tool name
H5DIFF_BIN=`pwd`/$H5DIFF # The path of the tool binary
pmode=yes
shift
;;
-h) # print help page
echo "$0 [-p] [-h]"
echo " -p run ph5diff tests"
echo " -h print help page"
shift
exit 0
;;
*) # unknown option
echo "$0: Unknown option ($1)"
exit 1
;;
esac
done
# RUNSERIAL is used. Check if it can return exit code from executalbe correctly.
if [ -n "$RUNSERIAL_NOEXITCODE" ]; then
echo "***Warning*** Serial Exit Code is not passed back to shell corretly."
echo "***Warning*** Exit code checking is skipped."
h5haveexitcode=no
fi
# Print a line-line message left justified in a field of 70 characters
# beginning with the word "Testing".
#
TESTING() {
SPACES=" "
echo "Testing $* $SPACES" | cut -c1-70 | tr -d '\012'
}
# Source in the output filter function definitions.
. $srcdir/../../../bin/output_filter.sh
# Run a test and print PASS or *FAIL*. If a test fails then increment
# the `nerrors' global variable and (if $verbose is set) display the
# difference between the actual output and the expected output. The
# expected output is given as the first argument to this function and
# the actual output file is calculated by replacing the `.ddl' with
# `.out'. The actual output is not removed if $HDF5_NOCLEANUP has a
# non-zero value.
#
# Need eval before the RUNCMD command because some machines like
# AIX, has RUNPARALLEL in the style as
# MP_PROCS=3 MP_TASKS_PER_NODE=3 poe ./a.out
# that throws the shell script off.
#
TOOLTEST() {
expect="$TESTDIR/$1"
actual="$TESTDIR/`basename $1 .txt`.out"
actual_err="$TESTDIR/`basename $1 .txt`.err"
actual_sav=${actual}-sav
actual_err_sav=${actual_err}-sav
shift
if test -n "$pmode"; then
RUNCMD=$RUNPARALLEL
else
RUNCMD=$RUNSERIAL
fi
# Run test.
TESTING $H5DIFF $@
(
#echo "#############################"
#echo "Expected output for '$H5DIFF $@'"
#echo "#############################"
cd $TESTDIR
eval $RUNCMD $H5DIFF_BIN "$@"
) >$actual 2>$actual_err
EXIT_CODE=$?
# save actual and actual_err in case they are needed later.
cp $actual $actual_sav
STDOUT_FILTER $actual
cp $actual_err $actual_err_sav
STDERR_FILTER $actual_err
cat $actual_err >> $actual
# don't add exit code check in pmode, as it causes failure. (exit code
# is from mpirun not tool)
# if any problem occurs relate to an exit code, it will be caught in
# serial mode, so the test is fullfilled.
if test $h5haveexitcode = 'yes' -a -z "$pmode"; then
echo "EXIT CODE: $EXIT_CODE" >> $actual
fi
if [ ! -f $expect ]; then
# Create the expect file if it doesn't yet exist.
echo " CREATED"
cp $actual $expect
echo " Expected result (*.ddl) missing"
nerrors="`expr $nerrors + 1`"
elif $CMP $expect $actual; then
echo " PASSED"
elif test $h5haveexitcode = 'yes' -a -z "$pmode"; then
echo "*FAILED*"
echo " Expected result ($expect) differs from actual result ($actual)"
nerrors="`expr $nerrors + 1`"
test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /'
else
# parallel mode output are often of different ordering from serial
# output. If the sorted expected and actual files compare the same,
# it is safe to assume the actual output match the expected file.
expect_sorted=expect_sorted
actual_sorted=actual_sorted
sort $expect -o $expect_sorted
sort $actual -o $actual_sorted
# remove "EXIT CODE:" line from expect file. test for exit code
# is done by serial mode.
grep -v "EXIT CODE:" $expect_sorted > $expect_sorted.noexit
mv $expect_sorted.noexit $expect_sorted
if $CMP $expect_sorted $actual_sorted; then
echo " PASSED"
else
echo "*FAILED*"
nerrors="`expr $nerrors + 1`"
if test yes = "$verbose"; then
echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)"
$DIFF $expect_sorted $actual_sorted |sed 's/^/ /'
echo "====The actual output ($actual_sav)"
sed 's/^/ /' < $actual_sav
echo "====The actual stderr ($actual_err_sav)"
sed 's/^/ /' < $actual_err_sav
echo "====End of actual stderr ($actual_err_sav)"
echo ""
fi
fi
fi
# Clean up output file
if test -z "$HDF5_NOCLEANUP"; then
rm -f $actual $actual_err $actual_sav $actual_err_sav
rm -f $actual_sorted $expect_sorted
fi
}
# Print a "SKIP" message
SKIP() {
TESTING $H5DIFF $@
echo " -SKIP-"
}
##############################################################################
# The tests
# To avoid the printing of the complete full path of the test file, that hides
# all the other parameters for long paths, the printing of the command line
# is done first in
# TESTING with the name only of the test file $TOOL, not its full path $TESTFILE
##############################################################################
# prepare for test
COPY_TESTFILES_TO_TESTDIR
# second copy of tvlstr.h5
$CP -f $SRC_TOOLS_TESTFILES/tvlstr.h5 $TESTDIR/tvlstr2.h5
# ############################################################################
# # Common usage
# ############################################################################
# 1.0
TOOLTEST h5diff_10.txt -h
# 1.1 normal mode
TOOLTEST h5diff_11.txt h5diff_basic1.h5 h5diff_basic2.h5
# 1.2 normal mode with objects
TOOLTEST h5diff_12.txt h5diff_basic1.h5 h5diff_basic2.h5 g1/dset1 g1/dset2
# 1.3 report mode
TOOLTEST h5diff_13.txt -r h5diff_basic1.h5 h5diff_basic2.h5
# 1.4 report mode with objects
TOOLTEST h5diff_14.txt -r h5diff_basic1.h5 h5diff_basic2.h5 g1/dset1 g1/dset2
# 1.5 with -d
TOOLTEST h5diff_15.txt --report --delta=5 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 1.6.1 with -p (int)
TOOLTEST h5diff_16_1.txt -v -p 0.02 h5diff_basic1.h5 h5diff_basic1.h5 g1/dset5 g1/dset6
# 1.6.2 with -p (unsigned long_long)
TOOLTEST h5diff_16_2.txt --verbose --relative=0.02 h5diff_basic1.h5 h5diff_basic1.h5 g1/dset7 g1/dset8
# 1.6.3 with -p (double)
TOOLTEST h5diff_16_3.txt -v -p 0.02 h5diff_basic1.h5 h5diff_basic1.h5 g1/dset9 g1/dset10
# 1.7 verbose mode
TOOLTEST h5diff_17.txt -v h5diff_basic1.h5 h5diff_basic2.h5
# 1.7 test 32-bit INFINITY
TOOLTEST h5diff_171.txt -v h5diff_basic1.h5 h5diff_basic1.h5 /g1/fp19 /g1/fp19_COPY
# 1.7 test 64-bit INFINITY
TOOLTEST h5diff_172.txt -v h5diff_basic1.h5 h5diff_basic1.h5 /g1/fp20 /g1/fp20_COPY
# 1.8 quiet mode
TOOLTEST h5diff_18.txt -q h5diff_basic1.h5 h5diff_basic2.h5
# 1.8 -v and -q
TOOLTEST h5diff_18_1.txt -v -q h5diff_basic1.h5 h5diff_basic2.h5
# ##############################################################################
# # not comparable types
# ##############################################################################
# 2.0
TOOLTEST h5diff_20.txt -v h5diff_types.h5 h5diff_types.h5 dset g1
# 2.1
TOOLTEST h5diff_21.txt -v h5diff_types.h5 h5diff_types.h5 dset l1
# 2.2
TOOLTEST h5diff_22.txt -v h5diff_types.h5 h5diff_types.h5 dset t1
# ##############################################################################
# # compare groups, types, links (no differences and differences)
# ##############################################################################
# 2.3
TOOLTEST h5diff_23.txt -v h5diff_types.h5 h5diff_types.h5 g1 g1
# 2.4
TOOLTEST h5diff_24.txt -v h5diff_types.h5 h5diff_types.h5 t1 t1
# 2.5
TOOLTEST h5diff_25.txt -v h5diff_types.h5 h5diff_types.h5 l1 l1
# 2.6
TOOLTEST h5diff_26.txt -v h5diff_types.h5 h5diff_types.h5 g1 g2
# 2.7
TOOLTEST h5diff_27.txt -v h5diff_types.h5 h5diff_types.h5 t1 t2
# 2.8
TOOLTEST h5diff_28.txt -v h5diff_types.h5 h5diff_types.h5 l1 l2
# ##############################################################################
# # Enum value tests (may become more comprehensive in the future)
# ##############################################################################
# 3.0
# test enum types which may have invalid values
TOOLTEST h5diff_30.txt -v h5diff_enum_invalid_values.h5 h5diff_enum_invalid_values.h5 dset1 dset2
# ##############################################################################
# # Dataset datatypes
# ##############################################################################
# 5.0
TOOLTEST h5diff_50.txt -v h5diff_dtypes.h5 h5diff_dtypes.h5 dset0a dset0b
# 5.1
TOOLTEST h5diff_51.txt -v h5diff_dtypes.h5 h5diff_dtypes.h5 dset1a dset1b
# 5.2
TOOLTEST h5diff_52.txt -v h5diff_dtypes.h5 h5diff_dtypes.h5 dset2a dset2b
# 5.3
TOOLTEST h5diff_53.txt -v h5diff_dtypes.h5 h5diff_dtypes.h5 dset3a dset4b
# 5.4
TOOLTEST h5diff_54.txt -v h5diff_dtypes.h5 h5diff_dtypes.h5 dset4a dset4b
# 5.5
TOOLTEST h5diff_55.txt -v h5diff_dtypes.h5 h5diff_dtypes.h5 dset5a dset5b
# 5.6
TOOLTEST h5diff_56.txt -v h5diff_dtypes.h5 h5diff_dtypes.h5 dset6a dset6b
# 5.7
TOOLTEST h5diff_57.txt -v h5diff_dtypes.h5 h5diff_dtypes.h5 dset7a dset7b
# 5.8 (region reference)
TOOLTEST h5diff_58.txt -v h5diff_dset1.h5 h5diff_dset2.h5 refreg
# test for both dset and attr with same type but with different size
# ( HDDFV-7942 )
TOOLTEST h5diff_59.txt -v h5diff_dtypes.h5 h5diff_dtypes.h5 dset11a dset11b
# Strings
# ( HDFFV-10128 )
TOOLTEST h5diff_60.txt -v diff_strings1.h5 diff_strings2.h5 string1 string1
TOOLTEST h5diff_61.txt -v diff_strings1.h5 diff_strings2.h5 string2 string2
TOOLTEST h5diff_62.txt -v diff_strings1.h5 diff_strings2.h5 string3 string3
TOOLTEST h5diff_63.txt -v diff_strings1.h5 diff_strings2.h5 string4 string4
# ##############################################################################
# # Error messages
# ##############################################################################
# 6.0: Check if the command line number of arguments is less than 3
TOOLTEST h5diff_600.txt h5diff_basic1.h5
# 6.1: Check if non-exist object name is specified
TOOLTEST h5diff_601.txt h5diff_basic1.h5 h5diff_basic1.h5 nono_obj
# ##############################################################################
# # -d
# ##############################################################################
# 6.3: negative value
TOOLTEST h5diff_603.txt -d -4 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.4: zero
TOOLTEST h5diff_604.txt -d 0 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.5: non number
TOOLTEST h5diff_605.txt -d u h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.6: hexadecimal
TOOLTEST h5diff_606.txt -d 0x1 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.7: string
TOOLTEST h5diff_607.txt -d "1" h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.8: use system epsilon
TOOLTEST h5diff_608.txt --use-system-epsilon h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.9: number larger than biggest difference
TOOLTEST h5diff_609.txt -d 200 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.10: number smaller than smallest difference
TOOLTEST h5diff_610.txt -d 1 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# ##############################################################################
# # -p
# ##############################################################################
# 6.12: negative value
TOOLTEST h5diff_612.txt -p -4 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.13: zero
TOOLTEST h5diff_613.txt -p 0 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.14: non number
TOOLTEST h5diff_614.txt -p u h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.15: hexadecimal
TOOLTEST h5diff_615.txt -p 0x1 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.16: string
TOOLTEST h5diff_616.txt -p "0.21" h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.17: repeated option
TOOLTEST h5diff_617.txt -p 0.21 -p 0.22 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.18: number larger than biggest difference
TOOLTEST h5diff_618.txt -p 2 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.19: number smaller than smallest difference
TOOLTEST h5diff_619.txt -p 0.005 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# ##############################################################################
# # -n
# ##############################################################################
# 6.21: negative value
TOOLTEST h5diff_621.txt -n -4 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.22: zero
TOOLTEST h5diff_622.txt -n 0 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.23: non number
TOOLTEST h5diff_623.txt -n u h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.24: hexadecimal
TOOLTEST h5diff_624.txt -n 0x1 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.25: string
TOOLTEST h5diff_625.txt -n "2" h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.26: repeated option
TOOLTEST h5diff_626.txt -n 2 -n 3 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.27: number larger than biggest difference
TOOLTEST h5diff_627.txt --count=200 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# 6.28: number smaller than smallest difference
TOOLTEST h5diff_628.txt -n 1 h5diff_basic1.h5 h5diff_basic2.h5 g1/dset3 g1/dset4
# Disabling this test as it hangs - LRK 20090618
# 6.29 non valid files
#TOOLTEST h5diff_629.txt file1.h6 file2.h6
# ##############################################################################
# # NaN
# ##############################################################################
# 6.30: test (NaN == NaN) must be true based on our documentation -- XCAO
TOOLTEST h5diff_630.txt -v -d "0.0001" h5diff_basic1.h5 h5diff_basic1.h5 g1/fp18 g1/fp18_COPY
TOOLTEST h5diff_631.txt -v --use-system-epsilon h5diff_basic1.h5 h5diff_basic1.h5 g1/fp18 g1/fp18_COPY
# ##############################################################################
# 7. attributes
# ##############################################################################
TOOLTEST h5diff_70.txt -v h5diff_attr1.h5 h5diff_attr2.h5
# temporary test to verify HDFFV-8639
TOOLTEST h5diff_tmp2.txt tmpSingleSiteBethe.output.h5 tmpSingleSiteBethe.reference.h5
# ##################################################
# attrs with verbose option level
# ##################################################
TOOLTEST h5diff_700.txt -v1 h5diff_attr1.h5 h5diff_attr2.h5
TOOLTEST h5diff_701.txt -v2 h5diff_attr1.h5 h5diff_attr2.h5
TOOLTEST h5diff_702.txt --verbose=1 h5diff_attr1.h5 h5diff_attr2.h5
TOOLTEST h5diff_703.txt --verbose=2 h5diff_attr1.h5 h5diff_attr2.h5
# same attr number , all same attr name
TOOLTEST h5diff_704.txt -v2 h5diff_attr_v_level1.h5 h5diff_attr_v_level2.h5 /g
# same attr number , some same attr name
TOOLTEST h5diff_705.txt -v2 h5diff_attr_v_level1.h5 h5diff_attr_v_level2.h5 /dset
# same attr number , all different attr name
TOOLTEST h5diff_706.txt -v2 h5diff_attr_v_level1.h5 h5diff_attr_v_level2.h5 /ntype
# different attr number , same attr name (intersected)
TOOLTEST h5diff_707.txt -v2 h5diff_attr_v_level1.h5 h5diff_attr_v_level2.h5 /g2
# different attr number , all different attr name
TOOLTEST h5diff_708.txt -v2 h5diff_attr_v_level1.h5 h5diff_attr_v_level2.h5 /g3
# when no attributes exist in both objects
TOOLTEST h5diff_709.txt -v2 h5diff_attr_v_level1.h5 h5diff_attr_v_level2.h5 /g4
# file vs file
TOOLTEST h5diff_710.txt -v2 h5diff_attr_v_level1.h5 h5diff_attr_v_level2.h5
# ##############################################################################
# 8. all dataset datatypes
# ##############################################################################
TOOLTEST h5diff_80.txt -v h5diff_dset1.h5 h5diff_dset2.h5
# 9. compare a file with itself
TOOLTEST h5diff_90.txt -v h5diff_basic2.h5 h5diff_basic2.h5
# 10. read by hyperslab, print indexes
TOOLTEST h5diff_100.txt -v h5diff_hyper1.h5 h5diff_hyper2.h5
# 11. floating point comparison
# double value
TOOLTEST h5diff_101.txt -v h5diff_basic1.h5 h5diff_basic1.h5 g1/d1 g1/d2
# float value
TOOLTEST h5diff_102.txt -v h5diff_basic1.h5 h5diff_basic1.h5 g1/fp1 g1/fp2
# with --use-system-epsilon for double value
TOOLTEST h5diff_103.txt -v --use-system-epsilon h5diff_basic1.h5 h5diff_basic1.h5 g1/d1 g1/d2
# with --use-system-epsilon for float value
TOOLTEST h5diff_104.txt -v --use-system-epsilon h5diff_basic1.h5 h5diff_basic1.h5 g1/fp1 g1/fp2
# not comparable -c flag
TOOLTEST h5diff_200.txt h5diff_basic2.h5 h5diff_basic2.h5 g2/dset1 g2/dset2
TOOLTEST h5diff_201.txt -c h5diff_basic2.h5 h5diff_basic2.h5 g2/dset1 g2/dset2
TOOLTEST h5diff_202.txt -c h5diff_basic2.h5 h5diff_basic2.h5 g2/dset2 g2/dset3
TOOLTEST h5diff_203.txt -c h5diff_basic2.h5 h5diff_basic2.h5 g2/dset3 g2/dset4
TOOLTEST h5diff_204.txt -c h5diff_basic2.h5 h5diff_basic2.h5 g2/dset4 g2/dset5
TOOLTEST h5diff_205.txt -c h5diff_basic2.h5 h5diff_basic2.h5 g2/dset5 g2/dset6
# not comparable in compound
TOOLTEST h5diff_206.txt -c h5diff_basic2.h5 h5diff_basic2.h5 g2/dset7 g2/dset8
TOOLTEST h5diff_207.txt -c h5diff_basic2.h5 h5diff_basic2.h5 g2/dset8 g2/dset9
# not comparable in dataspace of zero dimension size
TOOLTEST h5diff_208.txt -c h5diff_dset_zero_dim_size1.h5 h5diff_dset_zero_dim_size2.h5
# non-comparable dataset with comparable attribute, and other comparable datasets.
# Also test non-compatible attributes with different type, dimention, rank.
# All the comparables should display differences.
TOOLTEST h5diff_220.txt -c non_comparables1.h5 non_comparables2.h5 /g1
# comparable dataset with non-comparable attribute and other comparable attributes.
# All the comparables should display differences.
TOOLTEST h5diff_221.txt -c non_comparables1.h5 non_comparables2.h5 /g2
# entire file
# All the comparables should display differences.
TOOLTEST h5diff_222.txt -c non_comparables1.h5 non_comparables2.h5
# non-comparable test for common objects (same name) with different object types
# (HDFFV-7644)
TOOLTEST h5diff_223.txt -c non_comparables1.h5 non_comparables2.h5 /diffobjtypes
# swap files
TOOLTEST h5diff_224.txt -c non_comparables2.h5 non_comparables1.h5 /diffobjtypes
# ##############################################################################
# # Links compare without --follow-symlinks nor --no-dangling-links
# ##############################################################################
# test for bug1749
TOOLTEST h5diff_300.txt -v h5diff_links.h5 h5diff_links.h5 /link_g1 /link_g2
# ##############################################################################
# # Links compare with --follow-symlinks Only
# ##############################################################################
# soft links file to file
TOOLTEST h5diff_400.txt --follow-symlinks -v h5diff_softlinks.h5 h5diff_softlinks.h5
# softlink vs dset"
TOOLTEST h5diff_401.txt --follow-symlinks -v h5diff_softlinks.h5 h5diff_softlinks.h5 /softlink_dset1_1 /target_dset2
# dset vs softlink"
TOOLTEST h5diff_402.txt --follow-symlinks -v h5diff_softlinks.h5 h5diff_softlinks.h5 /target_dset2 /softlink_dset1_1
# softlink vs softlink"
TOOLTEST h5diff_403.txt --follow-symlinks -v h5diff_softlinks.h5 h5diff_softlinks.h5 /softlink_dset1_1 /softlink_dset2
# extlink vs extlink (FILE)"
TOOLTEST h5diff_404.txt --follow-symlinks -v h5diff_extlink_src.h5 h5diff_extlink_src.h5
# extlink vs dset"
TOOLTEST h5diff_405.txt --follow-symlinks -v h5diff_extlink_src.h5 h5diff_extlink_trg.h5 /ext_link_dset1 /target_group2/x_dset
# dset vs extlink"
TOOLTEST h5diff_406.txt --follow-symlinks -v h5diff_extlink_trg.h5 h5diff_extlink_src.h5 /target_group2/x_dset /ext_link_dset1
# extlink vs extlink"
TOOLTEST h5diff_407.txt --follow-symlinks -v h5diff_extlink_src.h5 h5diff_extlink_src.h5 /ext_link_dset1 /ext_link_dset2
# softlink vs extlink"
TOOLTEST h5diff_408.txt --follow-symlinks -v h5diff_softlinks.h5 h5diff_extlink_src.h5 /softlink_dset1_1 /ext_link_dset2
# extlink vs softlink "
TOOLTEST h5diff_409.txt --follow-symlinks -v h5diff_extlink_src.h5 h5diff_softlinks.h5 /ext_link_dset2 /softlink_dset1_1
# linked_softlink vs linked_softlink (FILE)"
TOOLTEST h5diff_410.txt --follow-symlinks -v h5diff_linked_softlink.h5 h5diff_linked_softlink.h5
# dset2 vs linked_softlink_dset1"
TOOLTEST h5diff_411.txt --follow-symlinks -v h5diff_linked_softlink.h5 h5diff_linked_softlink.h5 /target_dset2 /softlink1_to_slink2
# linked_softlink_dset1 vs dset2"
TOOLTEST h5diff_412.txt --follow-symlinks -v h5diff_linked_softlink.h5 h5diff_linked_softlink.h5 /softlink1_to_slink2 /target_dset2
# linked_softlink_to_dset1 vs linked_softlink_to_dset2"
TOOLTEST h5diff_413.txt --follow-symlinks -v h5diff_linked_softlink.h5 h5diff_linked_softlink.h5 /softlink1_to_slink2 /softlink2_to_slink2
# group vs linked_softlink_group1"
TOOLTEST h5diff_414.txt --follow-symlinks -v h5diff_linked_softlink.h5 h5diff_linked_softlink.h5 /target_group /softlink3_to_slink2
# linked_softlink_group1 vs group"
TOOLTEST h5diff_415.txt --follow-symlinks -v h5diff_linked_softlink.h5 h5diff_linked_softlink.h5 /softlink3_to_slink2 /target_group
# linked_softlink_to_group1 vs linked_softlink_to_group2"
TOOLTEST h5diff_416.txt --follow-symlinks -v h5diff_linked_softlink.h5 h5diff_linked_softlink.h5 /softlink3_to_slink2 /softlink4_to_slink2
# non-exist-softlink vs softlink"
TOOLTEST h5diff_417.txt --follow-symlinks -v h5diff_softlinks.h5 h5diff_softlinks.h5 /softlink_noexist /softlink_dset2
# softlink vs non-exist-softlink"
TOOLTEST h5diff_418.txt --follow-symlinks -v h5diff_softlinks.h5 h5diff_softlinks.h5 /softlink_dset2 /softlink_noexist
# non-exist-extlink_file vs extlink"
TOOLTEST h5diff_419.txt --follow-symlinks -v h5diff_extlink_src.h5 h5diff_extlink_src.h5 /ext_link_noexist2 /ext_link_dset2
# exlink vs non-exist-extlink_file"
TOOLTEST h5diff_420.txt --follow-symlinks -v h5diff_extlink_src.h5 h5diff_extlink_src.h5 /ext_link_dset2 /ext_link_noexist2
# extlink vs non-exist-extlink_obj"
TOOLTEST h5diff_421.txt --follow-symlinks -v h5diff_extlink_src.h5 h5diff_extlink_src.h5 /ext_link_dset2 /ext_link_noexist1
# non-exist-extlink_obj vs extlink"
TOOLTEST h5diff_422.txt --follow-symlinks -v h5diff_extlink_src.h5 h5diff_extlink_src.h5 /ext_link_noexist1 /ext_link_dset2
# extlink_to_softlink_to_dset1 vs dset2"
TOOLTEST h5diff_423.txt --follow-symlinks -v h5diff_ext2softlink_src.h5 h5diff_ext2softlink_trg.h5 /ext_link_to_slink1 /dset2
# dset2 vs extlink_to_softlink_to_dset1"
TOOLTEST h5diff_424.txt --follow-symlinks -v h5diff_ext2softlink_trg.h5 h5diff_ext2softlink_src.h5 /dset2 /ext_link_to_slink1
# extlink_to_softlink_to_dset1 vs extlink_to_softlink_to_dset2"
TOOLTEST h5diff_425.txt --follow-symlinks -v h5diff_ext2softlink_src.h5 h5diff_ext2softlink_src.h5 /ext_link_to_slink1 /ext_link_to_slink2
# ##############################################################################
# # Dangling links compare (--follow-symlinks and --no-dangling-links)
# ##############################################################################
# dangling links --follow-symlinks (FILE to FILE)
TOOLTEST h5diff_450.txt --follow-symlinks -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5
# dangling links --follow-symlinks and --no-dangling-links (FILE to FILE)
TOOLTEST h5diff_451.txt --follow-symlinks -v --no-dangling-links h5diff_danglelinks1.h5 h5diff_danglelinks2.h5
# try --no-dangling-links without --follow-symlinks options
TOOLTEST h5diff_452.txt --no-dangling-links h5diff_softlinks.h5 h5diff_softlinks.h5
# dangling link found for soft links (FILE to FILE)
TOOLTEST h5diff_453.txt --follow-symlinks -v --no-dangling-links h5diff_softlinks.h5 h5diff_softlinks.h5
# dangling link found for soft links (obj to obj)
TOOLTEST h5diff_454.txt --follow-symlinks -v --no-dangling-links h5diff_softlinks.h5 h5diff_softlinks.h5 /softlink_dset2 /softlink_noexist
# dangling link found for soft links (obj to obj) Both dangle links
TOOLTEST h5diff_455.txt --follow-symlinks -v --no-dangling-links h5diff_softlinks.h5 h5diff_softlinks.h5 /softlink_noexist /softlink_noexist
# dangling link found for ext links (FILE to FILE)
TOOLTEST h5diff_456.txt --follow-symlinks -v --no-dangling-links h5diff_extlink_src.h5 h5diff_extlink_src.h5
# dangling link found for ext links (obj to obj). target file exist
TOOLTEST h5diff_457.txt --follow-symlinks -v --no-dangling-links h5diff_extlink_src.h5 h5diff_extlink_src.h5 /ext_link_dset1 /ext_link_noexist1
# dangling link found for ext links (obj to obj). target file NOT exist
TOOLTEST h5diff_458.txt --follow-symlinks -v --no-dangling-links h5diff_extlink_src.h5 h5diff_extlink_src.h5 /ext_link_dset1 /ext_link_noexist2
# dangling link found for ext links (obj to obj). Both dangle links
TOOLTEST h5diff_459.txt --follow-symlinks -v --no-dangling-links h5diff_extlink_src.h5 h5diff_extlink_src.h5 /ext_link_noexist1 /ext_link_noexist2
# dangling link --follow-symlinks (obj vs obj)
# (HDFFV-7836)
TOOLTEST h5diff_465.txt --follow-symlinks h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /soft_link1
# (HDFFV-7835)
# soft dangling vs. soft dangling
TOOLTEST h5diff_466.txt -v --follow-symlinks h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /soft_link1
# soft link vs. soft dangling
TOOLTEST h5diff_467.txt -v --follow-symlinks h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /soft_link2
# ext dangling vs. ext dangling
TOOLTEST h5diff_468.txt -v --follow-symlinks h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /ext_link4
# ext link vs. ext dangling
TOOLTEST h5diff_469.txt -v --follow-symlinks h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /ext_link2
#----------------------------------------
# dangling links without follow symlink
# (HDFFV-7998)
# test - soft dangle links (same and different paths),
# - external dangle links (same and different paths)
TOOLTEST h5diff_471.txt -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5
TOOLTEST h5diff_472.txt -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /soft_link1
TOOLTEST h5diff_473.txt -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /soft_link4
TOOLTEST h5diff_474.txt -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /ext_link4
TOOLTEST h5diff_475.txt -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /ext_link1
# ##############################################################################
# # test for group diff recursivly
# ##############################################################################
# root
TOOLTEST h5diff_500.txt -v h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 / /
TOOLTEST h5diff_501.txt -v --follow-symlinks h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 / /
# root vs group
TOOLTEST h5diff_502.txt -v h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 / /grp1/grp2/grp3
# group vs group (same name and structure)
TOOLTEST h5diff_503.txt -v h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 /grp1 /grp1
# group vs group (different name and structure)
TOOLTEST h5diff_504.txt -v h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 /grp1/grp2 /grp1/grp2/grp3
# groups vs soft-link
TOOLTEST h5diff_505.txt -v h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 /grp1 /slink_grp1
TOOLTEST h5diff_506.txt -v --follow-symlinks h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 /grp1/grp2 /slink_grp2
# groups vs ext-link
TOOLTEST h5diff_507.txt -v h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 /grp1 /elink_grp1
TOOLTEST h5diff_508.txt -v --follow-symlinks h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 /grp1 /elink_grp1
# soft-link vs ext-link
TOOLTEST h5diff_509.txt -v h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 /slink_grp1 /elink_grp1
TOOLTEST h5diff_510.txt -v --follow-symlinks h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 /slink_grp1 /elink_grp1
# circled ext links
TOOLTEST h5diff_511.txt -v h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 /grp10 /grp11
TOOLTEST h5diff_512.txt -v --follow-symlinks h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 /grp10 /grp11
# circled soft2ext-link vs soft2ext-link
TOOLTEST h5diff_513.txt -v h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 /slink_grp10 /slink_grp11
TOOLTEST h5diff_514.txt -v --follow-symlinks h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 /slink_grp10 /slink_grp11
###############################################################################
# Test for group recursive diff via multi-linked external links
# With follow-symlinks, file h5diff_grp_recurse_ext1.h5 and h5diff_grp_recurse_ext2-1.h5 should
# be same with the external links.
###############################################################################
# file vs file
TOOLTEST h5diff_515.txt -v h5diff_grp_recurse_ext1.h5 h5diff_grp_recurse_ext2-1.h5
TOOLTEST h5diff_516.txt -v --follow-symlinks h5diff_grp_recurse_ext1.h5 h5diff_grp_recurse_ext2-1.h5
# group vs group
TOOLTEST h5diff_517.txt -v h5diff_grp_recurse_ext1.h5 h5diff_grp_recurse_ext2-1.h5 /g1
TOOLTEST h5diff_518.txt -v --follow-symlinks h5diff_grp_recurse_ext1.h5 h5diff_grp_recurse_ext2-1.h5 /g1
# ##############################################################################
# # Exclude objects (--exclude-path)
# ##############################################################################
#
# Same structure, same names and different value.
#
# Exclude the object with different value. Expect return - same
TOOLTEST h5diff_480.txt -v --exclude-path /group1/dset3 h5diff_exclude1-1.h5 h5diff_exclude1-2.h5
# Verify different by not excluding. Expect return - diff
TOOLTEST h5diff_481.txt -v h5diff_exclude1-1.h5 h5diff_exclude1-2.h5
#
# Different structure, different names.
#
# Exclude all the different objects. Expect return - same
TOOLTEST h5diff_482.txt -v --exclude-path "/group1" --exclude-path "/dset1" h5diff_exclude2-1.h5 h5diff_exclude2-2.h5
# Exclude only some different objects. Expect return - diff
TOOLTEST h5diff_483.txt -v --exclude-path "/group1" h5diff_exclude2-1.h5 h5diff_exclude2-2.h5
# Exclude from group compare
TOOLTEST h5diff_484.txt -v --exclude-path "/dset3" h5diff_exclude1-1.h5 h5diff_exclude1-2.h5 /group1
#
# Only one file contains unique objs. Common objs are same.
# (HDFFV-7837)
#
TOOLTEST h5diff_485.txt -v --exclude-path "/group1" h5diff_exclude3-1.h5 h5diff_exclude3-2.h5
TOOLTEST h5diff_486.txt -v --exclude-path "/group1" h5diff_exclude3-2.h5 h5diff_exclude3-1.h5
TOOLTEST h5diff_487.txt -v --exclude-path "/group1/dset" h5diff_exclude3-1.h5 h5diff_exclude3-2.h5
# ##############################################################################
# # diff various multiple vlen and fixed strings in a compound type dataset
# ##############################################################################
TOOLTEST h5diff_530.txt -v h5diff_comp_vl_strs.h5 h5diff_comp_vl_strs.h5 /group /group_copy
# test to verify HDFFV-8625
TOOLTEST h5diff_8625.txt -v --enable-error-stack h5diff_comp_vl_strs.h5 h5diff_comp_vl_strs.h5 /group/Compound_dset1 /group_copy/Compound_dset3
TOOLTEST h5diff_vlstr.txt -v tvlstr.h5 tvlstr2.h5
# ##############################################################################
# # Test container types (array,vlen) with multiple nested compound types
# # Complex compound types in dataset and attribute
# ##############################################################################
TOOLTEST h5diff_540.txt -v compounds_array_vlen1.h5 compounds_array_vlen2.h5
# ##############################################################################
# # Test mutually exclusive options
# ##############################################################################
#
# Test with -d , -p and --use-system-epsilon.
TOOLTEST h5diff_640.txt -v -d 5 -p 0.05 --use-system-epsilon h5diff_basic1.h5 h5diff_basic2.h5 /g1/dset3 /g1/dset4
TOOLTEST h5diff_641.txt -v -d 5 -p 0.05 h5diff_basic1.h5 h5diff_basic2.h5 /g1/dset3 /g1/dset4
TOOLTEST h5diff_642.txt -v -p 0.05 -d 5 h5diff_basic1.h5 h5diff_basic2.h5 /g1/dset3 /g1/dset4
TOOLTEST h5diff_643.txt -v -d 5 --use-system-epsilon h5diff_basic1.h5 h5diff_basic2.h5 /g1/dset3 /g1/dset4
TOOLTEST h5diff_644.txt -v --use-system-epsilon -d 5 h5diff_basic1.h5 h5diff_basic2.h5 /g1/dset3 /g1/dset4
TOOLTEST h5diff_645.txt -v -p 0.05 --use-system-epsilon h5diff_basic1.h5 h5diff_basic2.h5 /g1/dset3 /g1/dset4
TOOLTEST h5diff_646.txt -v --use-system-epsilon -p 0.05 h5diff_basic1.h5 h5diff_basic2.h5 /g1/dset3 /g1/dset4
# ##############################################################################
# VDS tests
# ##############################################################################
TOOLTEST h5diff_v1.txt -v 1_vds.h5 2_vds.h5
TOOLTEST h5diff_v2.txt -r 1_vds.h5 2_vds.h5
TOOLTEST h5diff_v3.txt -c 1_vds.h5 2_vds.h5
# ##############################################################################
# # END
# ##############################################################################
# Clean up temporary files/directories
CLEAN_TESTFILES_AND_TESTDIR
if test $nerrors -eq 0 ; then
echo "All $TESTNAME tests passed."
exit $EXIT_SUCCESS
else
echo "$TESTNAME tests failed with $nerrors errors."
exit $EXIT_FAILURE
fi
|