bpo-43244: Fix test_peg_generator for PyAST_Validate() (GH-24912)

test_peg_generator now defines _Py_TEST_PEGEN macro when building C code to not call PyAST_Validate() in Parser/pegen.c. Moreover, it defines Py_BUILD_CORE_MODULE macro to get access to the internal C API. Remove "global_ast_state" from Python-ast.c when it's built by test_peg_generator: always get the AST state from the current interpreter.
author: Victor Stinner <vstinner@python.org> 2021-03-18 01:46:06 (GMT)
committer: GitHub <noreply@github.com> 2021-03-18 01:46:06 (GMT)
commit: e0bf70d08c4a4a68782702e747e6bf7670667591 (patch)
tree: 36994e29ed642e690b7932129ee150c484fd20d9 /Python/_warnings.c
parent: 08fb8ac99ab03d767aa0f1cfab3573eddf9df018 (diff)
download: cpython-e0bf70d08c4a4a68782702e747e6bf7670667591.zip
cpython-e0bf70d08c4a4a68782702e747e6bf7670667591.tar.gz
cpython-e0bf70d08c4a4a68782702e747e6bf7670667591.tar.bz2
0 files changed, 0 insertions, 0 deletions
diff --git a/CMakeInstallation.cmake b/CMakeInstallation.cmake
index 7a0746a..b933c29 100644
--- a/CMakeInstallation.cmake
+++ b/CMakeInstallation.cmake
@@ -33,7 +33,7 @@ if (NOT HDF5_EXTERNALLY_CONFIGURED)
         EXPORT ${HDF5_EXPORTED_TARGETS}
         DESTINATION ${HDF5_INSTALL_CMAKE_DIR}/hdf5
         FILE ${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-targets.cmake
-        NAMESPACE ${HDF5_PACKAGE}::
+        NAMESPACE ${HDF_PACKAGE_NAMESPACE}
         COMPONENT configinstall
     )
   endif ()
@@ -45,7 +45,7 @@ if (NOT HDF5_EXTERNALLY_CONFIGURED)
     export (
         TARGETS ${HDF5_LIBRARIES_TO_EXPORT} ${HDF5_LIB_DEPENDENCIES} ${HDF5_UTILS_TO_EXPORT}
         FILE ${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-targets.cmake
-        NAMESPACE ${HDF5_PACKAGE}::
+        NAMESPACE ${HDF_PACKAGE_NAMESPACE}
     )
   endif ()
 endif ()
@@ -104,6 +104,12 @@ endif ()
 # Configure the hdf5-config-version .cmake file for the install directory
 #-----------------------------------------------------------------------------
 if (NOT HDF5_EXTERNALLY_CONFIGURED)
+  # 3.11 or greater
+  #write_basic_package_version_file (
+  #  ${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config-version.cmake
+  #  VERSION ${HDF5_PACKAGE_VERSION}
+  #  COMPATIBILITY SameMinorVersion
+  #)
   configure_file (
       ${HDF_RESOURCES_DIR}/hdf5-config-version.cmake.in
       ${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config-version.cmake @ONLY
diff --git a/CMakeLists.txt b/CMakeLists.txt
index b9cdf4d..fc656c0 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -10,7 +10,7 @@ project (HDF5 C)
 # set CMAKE_INSTALL_PREFIX to the required install path.
 # Make install can be used to install all components for system-wide use.
 #
-if ("${CMAKE_CURRENT_SOURCE_DIR}" STREQUAL "${CMAKE_CURRENT_BINARY_DIR}")
+if (CMAKE_CURRENT_SOURCE_DIR STREQUAL CMAKE_CURRENT_BINARY_DIR)
     MESSAGE(FATAL_ERROR "\nERROR! ${PROJECT_NAME} DOES NOT SUPPORT IN SOURCE BUILDS!\n"
       "CMAKE_CURRENT_SOURCE_DIR=${CMAKE_CURRENT_SOURCE_DIR}"
       " == CMAKE_CURRENT_BINARY_DIR=${CMAKE_CURRENT_BINARY_DIR}\n"
@@ -314,7 +314,7 @@ set (HDF5_PACKAGE_NAME "HDF5")
 set (HDF5_PACKAGE_VERSION "${H5_VERS_MAJOR}.${H5_VERS_MINOR}.${H5_VERS_RELEASE}")
 set (HDF5_PACKAGE_VERSION_MAJOR "${H5_VERS_MAJOR}.${H5_VERS_MINOR}")
 set (HDF5_PACKAGE_VERSION_MINOR "${H5_VERS_RELEASE}")
-if (NOT "${H5_VERS_SUBRELEASE}" STREQUAL "")
+if (H5_VERS_SUBRELEASE)
   set (HDF5_PACKAGE_VERSION_STRING "${HDF5_PACKAGE_VERSION}-${H5_VERS_SUBRELEASE}")
 else ()
   set (HDF5_PACKAGE_VERSION_STRING "${HDF5_PACKAGE_VERSION}")
@@ -416,18 +416,23 @@ set (CMAKE_INCLUDE_CURRENT_DIR_IN_INTERFACE ON)
 # Mac OS X Options
 #-----------------------------------------------------------------------------
 if (HDF5_BUILD_FRAMEWORKS AND NOT BUILD_SHARED_LIBS)
-  set (BUILD_SHARED_LIBS ON CACHE BOOL "Build Shared Libraries")
+  set (BUILD_SHARED_LIBS ON CACHE BOOL "Build Shared Libraries" FORCE)
 endif ()
 
 #-----------------------------------------------------------------------------
 # Option to Build Shared and Static libs, default is both
 #-----------------------------------------------------------------------------
+option (ONLY_SHARED_LIBS "Only Build Shared Libraries" OFF)
+set (H5_ENABLE_STATIC_LIB YES)
+if (ONLY_SHARED_LIBS)
+  set (H5_ENABLE_STATIC_LIB NO)
+  set (BUILD_SHARED_LIBS ON CACHE BOOL "Build Shared Libraries")
+endif ()
 option (BUILD_SHARED_LIBS "Build Shared Libraries" ON)
 set (H5_ENABLE_SHARED_LIB NO)
 if (BUILD_SHARED_LIBS)
   set (H5_ENABLE_SHARED_LIB YES)
 endif ()
-set (H5_ENABLE_STATIC_LIB YES)
 set (CMAKE_POSITION_INDEPENDENT_CODE ON)
 
 #-----------------------------------------------------------------------------
@@ -683,8 +688,10 @@ endif ()
 option (HDF5_ENABLE_THREADSAFE "Enable thread-safety" OFF)
 if (HDF5_ENABLE_THREADSAFE)
   # check for unsupported options
-  message (STATUS " **** thread-safety option not supported with static library **** ")
-  message (STATUS " **** thread-safety option will not be used building static library **** ")
+  if (WIN32)
+    message (STATUS " **** thread-safety option not supported with static library **** ")
+    message (STATUS " **** thread-safety option will not be used building static library **** ")
+  endif ()
   if (HDF5_ENABLE_PARALLEL)
     if (NOT ALLOW_UNSUPPORTED)
       message (FATAL_ERROR " **** parallel and thread-safety options are not supported **** ")
@@ -722,9 +729,9 @@ if (HDF5_ENABLE_THREADSAFE)
     endif ()
   endif ()
   set(THREADS_PREFER_PTHREAD_FLAG ON)
-  find_package(Threads)
-  if (NOT Threads_FOUND)
-    message (STATUS " **** thread-safe package not found - threads still might work **** ")
+  find_package(Threads REQUIRED)
+  if (Threads_FOUND)
+    set (H5_HAVE_THREADSAFE 1)
   endif ()
 endif ()
 
@@ -735,13 +742,17 @@ add_subdirectory (src)
 
 if (HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "GIT" OR HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "TGZ")
   if (ZLIB_FOUND AND ZLIB_USE_EXTERNAL)
-    add_dependencies (${HDF5_LIB_TARGET} ZLIB)
+    if (NOT ONLY_SHARED_LIBS)
+      add_dependencies (${HDF5_LIB_TARGET} ZLIB)
+    endif ()
     if (BUILD_SHARED_LIBS)
       add_dependencies (${HDF5_LIBSH_TARGET} ZLIB)
     endif ()
   endif ()
   if (SZIP_FOUND AND SZIP_USE_EXTERNAL)
-    add_dependencies (${HDF5_LIB_TARGET} SZIP)
+    if (NOT ONLY_SHARED_LIBS)
+      add_dependencies (${HDF5_LIB_TARGET} SZIP)
+    endif ()
     if (BUILD_SHARED_LIBS)
       add_dependencies (${HDF5_LIBSH_TARGET} SZIP)
     endif ()
@@ -754,7 +765,7 @@ endif ()
 option (BUILD_TESTING "Build HDF5 Unit Testing" ON)
 if (BUILD_TESTING)
   set (DART_TESTING_TIMEOUT 1200
-      CACHE INTEGER
+      CACHE STRING
       "Timeout in seconds for each test (default 1200=20minutes)"
   )
 
@@ -770,11 +781,11 @@ if (BUILD_TESTING)
     mark_as_advanced (HDF5_TEST_FHEAP_VFD)
   endif ()
 
-  option (HDF5_TEST_VOL "Execute tests with different VOL connectors" OFF)
-  mark_as_advanced (HDF5_TEST_VOL)
-  if (HDF5_TEST_VOL)
-    option (HDF5_TEST_FHEAP_VOL "Execute fheap test with different VOL connectors" ON)
-    mark_as_advanced (HDF5_TEST_FHEAP_VOL)
+  option (HDF5_TEST_PASSTHROUGH_VOL "Execute tests with different passthrough VOL connectors" OFF)
+  mark_as_advanced (HDF5_TEST_PASSTHROUGH_VOL)
+  if (HDF5_TEST_PASSTHROUGH_VOL)
+    option (HDF5_TEST_FHEAP_PASSTHROUGH_VOL "Execute fheap test with different passthrough VOL connectors" ON)
+    mark_as_advanced (HDF5_TEST_FHEAP_PASSTHROUGH VOL)
   endif ()
 
   option (HDF_TEST_EXPRESS "Control testing framework (0-3)" "0")
@@ -845,7 +856,7 @@ if (EXISTS "${HDF5_SOURCE_DIR}/fortran" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/for
     message (STATUS "Fortran compiler ID is ${CMAKE_Fortran_COMPILER_ID}")
     # Building with PGI requires CMake 3.3 or greater  because previous versions
     # of CMake add the wrong compiler flag for the PGI Fortran compiler.
-    if ("${CMAKE_Fortran_COMPILER_ID}" MATCHES "PGI" AND "${CMAKE_VERSION}" VERSION_LESS "3.3")
+    if (CMAKE_Fortran_COMPILER_ID MATCHES "PGI" AND CMAKE_VERSION VERSION_LESS "3.3")
       message (FATAL_ERROR " **** PGI FORTRAN REQUIRES CMAKE VERSION 3.3 OR GREATER **** ")
     endif ()
 
diff --git a/CTestConfig.cmake b/CTestConfig.cmake
index 5b35688..d80f48f 100644
--- a/CTestConfig.cmake
+++ b/CTestConfig.cmake
@@ -45,9 +45,9 @@ set (VALGRIND_COMMAND_OPTIONS "-v --tool=memcheck --leak-check=full --track-fds=
 set (CTEST_MEMORYCHECK_COMMAND "/usr/bin/valgrind")
 set (CTEST_MEMORYCHECK_COMMAND_OPTIONS "-v --tool=memcheck --leak-check=full --track-fds=yes --num-callers=50 --show-reachable=yes --track-origins=yes --malloc-fill=0xff --free-fill=0xfe")
 
-set (CTEST_TEST_TIMEOUT 600 CACHE STRING
+set (CTEST_TEST_TIMEOUT 1200 CACHE STRING
     "Maximum time allowed before CTest will kill the test.")
-set (DART_TESTING_TIMEOUT 600 CACHE STRING
+set (DART_TESTING_TIMEOUT 1200 CACHE STRING
     "Maximum time allowed before CTest will kill the test." FORCE)
 
 SET(CTEST_SUBMIT_RETRY_DELAY 20 CACHE STRING
diff --git a/MANIFEST b/MANIFEST
index 0fd0d5c..01ee8d8 100644
--- a/MANIFEST
+++ b/MANIFEST
@@ -71,12 +71,15 @@
 ./bin/errors              _DO_NOT_DISTRIBUTE_
 ./bin/genparser
 ./bin/gcov_script            _DO_NOT_DISTRIBUTE_
+./bin/h5cc.in
+./bin/h5redeploy.in
 ./bin/h5vers
 ./bin/iostats
 ./bin/locate_sw
 ./bin/make_err
 ./bin/make_overflow
 ./bin/make_vers
+./bin/Makefile.am
 ./bin/makehelp
 ./bin/mkdirs
 ./bin/newer
@@ -91,11 +94,8 @@
 ./bin/switch_maint_mode      _DO_NOT_DISTRIBUTE_
 ./bin/timekeeper      _DO_NOT_DISTRIBUTE_
 ./bin/trace
+./bin/warnhist      _DO_NOT_DISTRIBUTE_
 ./bin/yodconfigure
-./bin/batch/cori_ctestP.sl.in.cmake
-./bin/batch/cori_ctestS.sl.in.cmake
-./bin/batch/cori_knl_ctestP.sl.in.cmake
-./bin/batch/cori_knl_ctestS.sl.in.cmake
 ./bin/batch/ctestP.lsf.in.cmake
 ./bin/batch/ctestP.sl.in.cmake
 ./bin/batch/ctestS.lsf.in.cmake
@@ -103,6 +103,7 @@
 ./bin/batch/knl_ctestP.sl.in.cmake
 ./bin/batch/knl_ctestS.sl.in.cmake
 ./bin/batch/knl_H5detect.sl.in.cmake
+./bin/batch/ctest.qsub.in.cmake
 ./bin/batch/ray_ctestP.lsf.in.cmake
 ./bin/batch/ray_ctestS.lsf.in.cmake
 ./bin/batch/raybsub
@@ -245,6 +246,7 @@
 ./fortran/src/H5Sff.F90
 ./fortran/src/H5Tf.c
 ./fortran/src/H5Tff.F90
+./fortran/src/H5VLff.F90
 ./fortran/src/H5Zf.c
 ./fortran/src/H5Zff.F90
 ./fortran/src/H5config_f.inc.cmake
@@ -264,8 +266,8 @@
 ./fortran/src/h5fc.in
 ./fortran/src/hdf5_fortrandll.def.in
 
-
 ./fortran/test/Makefile.am
+./fortran/test/vol_connector.F90
 ./fortran/test/fflush1.F90
 ./fortran/test/fflush2.F90
 ./fortran/test/fortranlib_test.F90
@@ -461,8 +463,9 @@
 ./release_docs/INSTALL_parallel
 ./release_docs/INSTALL_Warnings.txt
 ./release_docs/INSTALL_Windows.txt
-./release_docs/RELEASE.txt
+./release_docs/README_HDF5_CMake
 ./release_docs/README_HPC
+./release_docs/RELEASE.txt
 ./release_docs/USING_HDF5_CMake.txt
 ./release_docs/USING_HDF5_VS.txt
 
@@ -846,6 +849,7 @@
 ./src/H5S.c
 ./src/H5Sall.c
 ./src/H5Sdbg.c
+./src/H5Sdeprec.c
 ./src/H5Shyper.c
 ./src/H5Smodule.h
 ./src/H5Smpio.c
@@ -900,6 +904,8 @@
 ./src/H5TSprivate.h
 ./src/H5VL.c
 ./src/H5VLcallback.c
+./src/H5VLconnector.h
+./src/H5VLconnector_passthru.h
 ./src/H5VLint.c
 ./src/H5VLmodule.h
 ./src/H5VLnative.c
@@ -990,6 +996,9 @@
 ./test/evict_on_close.c
 ./test/extend.c
 ./test/external.c
+./test/external_common.c
+./test/external_common.h
+./test/external_env.c
 ./test/error_test.c
 ./test/err_compat.c
 ./test/filter_error.h5
@@ -1007,6 +1016,7 @@
 ./test/file_image.c
 ./test/file_image_core_test.h5
 ./test/fill_old.h5
+./test/fill18.h5
 ./test/fillval.c
 ./test/filter_fail.c
 ./test/filter_plugin.c
@@ -1114,6 +1124,7 @@
 ./test/tcoords.c
 ./test/testabort_fail.sh.in
 ./test/testcheck_version.sh.in
+./test/testexternal_env.sh.in
 ./test/testerror.sh.in
 ./test/testlinks_env.sh.in
 ./test/test_filter_plugin.sh.in
@@ -1129,6 +1140,7 @@
 ./test/testmeta.c
 ./test/testswmr.sh.in
 ./test/testvdsswmr.sh.in
+./test/testvds_env.sh.in
 ./test/tfile.c
 ./test/tgenprop.c
 ./test/th5o.c
@@ -1168,6 +1180,7 @@
 ./test/use_disable_mdc_flushes.c
 ./test/use.h
 ./test/vds.c
+./test/vds_env.c
 ./test/vds_swmr.h
 ./test/vds_swmr_gen.c
 ./test/vds_swmr_reader.c
@@ -1535,11 +1548,9 @@
 ./tools/lib/io_timer.h
 
 ./tools/src/misc/Makefile.am
-./tools/src/misc/h5cc.in
 ./tools/src/misc/h5clear.c
 ./tools/src/misc/h5debug.c
 ./tools/src/misc/h5mkgrp.c
-./tools/src/misc/h5redeploy.in
 ./tools/src/misc/h5repart.c
 ./tools/test/misc/Makefile.am
 ./tools/test/misc/h5repart_gentest.c
@@ -1689,6 +1700,7 @@
 ./tools/testfiles/h5dump-help.txt
 ./tools/testfiles/non_existing.ddl
 ./tools/testfiles/packedbits.ddl
+./tools/testfiles/t128bit_float.h5
 ./tools/testfiles/taindices.h5
 ./tools/testfiles/tall-1.ddl
 ./tools/testfiles/tall-2.ddl
@@ -2902,6 +2914,32 @@
 ./java/src/jni/h5oImp.h
 ./java/src/jni/h5pImp.c
 ./java/src/jni/h5pImp.h
+./java/src/jni/h5pACPLImp.c
+./java/src/jni/h5pACPLImp.h
+./java/src/jni/h5pDAPLImp.c
+./java/src/jni/h5pDAPLImp.h
+./java/src/jni/h5pDCPLImp.c
+./java/src/jni/h5pDCPLImp.h
+./java/src/jni/h5pDXPLImp.c
+./java/src/jni/h5pDXPLImp.h
+./java/src/jni/h5pFAPLImp.c
+./java/src/jni/h5pFAPLImp.h
+./java/src/jni/h5pFCPLImp.c
+./java/src/jni/h5pFCPLImp.h
+./java/src/jni/h5pGAPLImp.c
+./java/src/jni/h5pGAPLImp.h
+./java/src/jni/h5pGCPLImp.c
+./java/src/jni/h5pGCPLImp.h
+./java/src/jni/h5pLAPLImp.c
+./java/src/jni/h5pLAPLImp.h
+./java/src/jni/h5pLCPLImp.c
+./java/src/jni/h5pLCPLImp.h
+./java/src/jni/h5pOCPLImp.c
+./java/src/jni/h5pOCPLImp.h
+./java/src/jni/h5pOCpyPLImp.c
+./java/src/jni/h5pOCpyPLImp.h
+./java/src/jni/h5pStrCPLImp.c
+./java/src/jni/h5pStrCPLImp.h
 ./java/src/jni/h5plImp.c
 ./java/src/jni/h5plImp.h
 ./java/src/jni/h5rImp.c
@@ -3211,8 +3249,6 @@
 ./config/cmake/ConfigureChecks.cmake
 ./config/cmake/CPack.Info.plist.in
 ./config/cmake/CTestCustom.cmake
-./config/cmake/FindHDFJAVA.cmake.in
-./config/cmake/FindJNI.cmake
 ./config/cmake/H5cxx_config.h.in
 ./config/cmake/H5pubconf.h.in
 ./config/cmake/hdf5-config.cmake.in
@@ -3312,9 +3348,9 @@
 ./hl/tools/h5watch/CMakeTests.cmake
 ./src/CMakeLists.txt
 ./test/CMakeLists.txt
+./test/CMakePassthroughVOLTests.cmake
 ./test/CMakeTests.cmake
 ./test/CMakeVFDTests.cmake
-./test/CMakeVOLTests.cmake
 ./test/flushrefreshTest.cmake
 ./test/ShellTests.cmake
 ./testpar/CMakeLists.txt
@@ -3371,8 +3407,12 @@
 ./config/cmake/scripts/CTestScript.cmake
 ./config/cmake/scripts/HDF5config.cmake
 ./config/cmake/scripts/HDF5options.cmake
-./config/cmake/scripts/HPC/par-HDF5options.cmake
-./config/cmake/scripts/HPC/ser-HDF5options.cmake
+
+# CMake-specific HPC Scripts
+./config/cmake/scripts/HPC/sbatch-HDF5options.cmake
+./config/cmake/scripts/HPC/bsub-HDF5options.cmake
+./config/cmake/scripts/HPC/qsub-HDF5options.cmake
+./config/cmake/scripts/HPC/raybsub-HDF5options.cmake
 
 # Files generated by autogen
 ./aclocal.m4
@@ -3387,6 +3427,7 @@
 ./c++/examples/Makefile.in
 ./c++/Makefile.in
 ./configure
+./bin/Makefile.in
 ./c++/src/Makefile.in
 ./c++/test/Makefile.in
 ./examples/Makefile.in
diff --git a/Makefile.am b/Makefile.am
index d58b1b4..d96ffe3 100644
--- a/Makefile.am
+++ b/Makefile.am
@@ -49,11 +49,6 @@ include $(top_srcdir)/config/commence.am
 
 # Conditionals.  These conditionals are defined during configure
 # Define each variable to empty if it is not used to placate pmake
-if BUILD_PARALLEL_CONDITIONAL
-   TESTPARALLEL_DIR =testpar
-else
-   TESTPARALLEL_DIR=
-endif
 if BUILD_CXX_CONDITIONAL
    CXX_DIR =c++
 else
@@ -74,9 +69,24 @@ if BUILD_HDF5_HL_CONDITIONAL
 else
    HDF5_HL_DIR=
 endif
+if BUILD_TESTS_CONDITIONAL
+   TESTSERIAL_DIR =test
+else
+   TESTSERIAL_DIR=
+endif
+if BUILD_TESTS_PARALLEL_CONDITIONAL
+   TESTPARALLEL_DIR =testpar
+else
+   TESTPARALLEL_DIR=
+endif
+if BUILD_TOOLS_CONDITIONAL
+   TOOLS_DIR =tools
+else
+   TOOLS_DIR=
+endif
 
-SUBDIRS = src test $(TESTPARALLEL_DIR) tools . $(CXX_DIR) $(FORTRAN_DIR) \
-          $(JAVA_DIR) $(HDF5_HL_DIR)
+SUBDIRS = src $(TESTSERIAL_DIR) $(TESTPARALLEL_DIR) bin $(TOOLS_DIR) . \
+          $(CXX_DIR) $(FORTRAN_DIR) $(JAVA_DIR) $(HDF5_HL_DIR)
 DIST_SUBDIRS = src test testpar tools . c++ fortran hl examples java
 
 # Some files generated during configure that should be cleaned
@@ -186,10 +196,11 @@ check-vfd:
 	  fi;                                                          \
 	done
 
-# Run tests with different Virtual Object Layer Connectors.
-# Currently, only invoke check-vol in the test directory.
-check-vol:
-	for d in src test; do                                 \
+# Run tests with different passthrough Virtual Object Layer Connectors.
+# NOTE: Will only succeed with passthrough VOL connectors that use
+#       the native VOL connector as the terminal connector.
+check-passthrough-vol:
+	for d in $(SUBDIRS); do                                \
 	  if test $$d != .; then                                       \
 	    (cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1;          \
 	  fi;                                                          \
diff --git a/README.txt b/README.txt
index 03e8dd7..64f1345 100644
--- a/README.txt
+++ b/README.txt
@@ -1,4 +1,4 @@
-HDF5 version 1.11.4 currently under development
+HDF5 version 1.11.6 currently under development
 
 ------------------------------------------------------------------------------
 Please refer to the release_docs/INSTALL file for installation instructions.
diff --git a/bin/Makefile.am b/bin/Makefile.am
new file mode 100644
index 0000000..a39b695
--- /dev/null
+++ b/bin/Makefile.am
@@ -0,0 +1,57 @@
+#
+# Copyright by The HDF Group.
+# Copyright by the Board of Trustees of the University of Illinois.
+# All rights reserved.
+#
+# This file is part of HDF5.  The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
+# If you do not have access to either file, you may request a copy from
+# help@hdfgroup.org.
+##
+## Makefile.am
+## Run automake to generate a Makefile.in from this file.
+#
+# HDF5 Library Makefile(.in)
+#
+
+include $(top_srcdir)/config/commence.am
+
+# Include src directory
+AM_CPPFLAGS+=-I$(top_srcdir)/src -I$(top_srcdir)/tools/lib
+
+# These are our main targets
+bin_SCRIPTS=h5redeploy
+
+# Tell automake to clean h5redeploy script
+CLEANFILES=h5redeploy
+
+# These were generated by configure.  Remove them only when distclean.
+DISTCLEANFILES=h5cc
+
+# All programs rely on hdf5 library and h5tools library
+LDADD=$(LIBH5TOOLS) $(LIBHDF5)
+
+# How to build h5redeploy script
+h5redeploy: h5redeploy.in
+	@cp $(srcdir)/$@.in $@
+
+# h5cc needs custom install and uninstall rules, since it may be
+# named h5pcc if hdf5 is being built in parallel mode.
+if BUILD_PARALLEL_CONDITIONAL
+  H5CC_NAME=h5pcc
+else
+  H5CC_NAME=h5cc
+endif
+
+$(DESTDIR)$(bindir):
+	echo " $(MKDIR_P) '$(DESTDIR)$(bindir)'"; \
+	$(MKDIR_P) "$(DESTDIR)$(bindir)" || exit 1;
+
+install-exec-local: $(DESTDIR)$(bindir)
+	@$(INSTALL) h5cc $(DESTDIR)$(bindir)/$(H5CC_NAME)
+uninstall-local:
+	@$(RM) $(DESTDIR)$(bindir)/$(H5CC_NAME)
+
+include $(top_srcdir)/config/conclude.am
diff --git a/bin/batch/cori_ctestP.sl.in.cmake b/bin/batch/cori_ctestP.sl.in.cmake
deleted file mode 100644
index 6aa4916..0000000
--- a/bin/batch/cori_ctestP.sl.in.cmake
+++ /dev/null
@@ -1,17 +0,0 @@
-#!/bin/bash
-
-#SBATCH -C haswell
-#SBATCH --nodes=1
-#SBATCH -t 00:30:00
-#SBATCH --mail-type=BEGIN,END,FAIL
-##SBATCH --mail-user=<username>@sandia.gov
-#SBATCH --export=ALL
-#SBATCH --job-name=h5_ctestP
-
-cd @HDF5_BINARY_DIR@
-CMD="ctest . -R TEST_PAR|PH5DIFF|PERFORM|ph5example -E t_cache_image -C Release -T test"
-
-echo "Run $CMD. Test output will be in build/ctestP.out"
-$CMD >& ctestP.out
-echo "Done running $CMD"
-
diff --git a/bin/batch/cori_ctestS.sl.in.cmake b/bin/batch/cori_ctestS.sl.in.cmake
deleted file mode 100644
index cf68826..0000000
--- a/bin/batch/cori_ctestS.sl.in.cmake
+++ /dev/null
@@ -1,16 +0,0 @@
-#!/bin/bash
-
-#SBATCH -C haswell
-#SBATCH --nodes=1
-#SBATCH -t 00:30:00
-#SBATCH --mail-type=BEGIN,END,FAIL
-##SBATCH --mail-user=<username>@sandia.gov
-#SBATCH --export=ALL
-#SBATCH --job-name=h5_ctestS
-
-cd @HDF5_BINARY_DIR@
-CMD="ctest . -E TEST_PAR|PH5DIFF|PERFORM|ph5example -C Release -j 32 -T test"
-
-echo "Run $CMD. Test output will be in build/ctestS.out"
-$CMD  >& ctestS.out
-echo "Done running $CMD"
diff --git a/bin/batch/cori_knl_ctestP.sl.in.cmake b/bin/batch/cori_knl_ctestP.sl.in.cmake
deleted file mode 100644
index 90dd52a..0000000
--- a/bin/batch/cori_knl_ctestP.sl.in.cmake
+++ /dev/null
@@ -1,17 +0,0 @@
-#!/bin/bash
-
-#SBATCH -C knl,quad,cache
-#SBATCH --nodes=1
-#SBATCH -t 00:30:00
-#SBATCH --mail-type=BEGIN,END,FAIL
-##SBATCH --mail-user=<username>@sandia.gov
-#SBATCH --export=ALL
-#SBATCH --job-name=h5_ctestP
-
-cd @HDF5_BINARY_DIR@
-CMD="ctest . -R TEST_PAR|PH5DIFF|PERFORM|ph5example -E t_cache_image -C Release -T test"
-
-echo "Run $CMD. Test output will be in build/ctestP.out"
-$CMD >& ctestP.out
-echo "Done running $CMD"
-
diff --git a/bin/batch/cori_knl_ctestS.sl.in.cmake b/bin/batch/cori_knl_ctestS.sl.in.cmake
deleted file mode 100644
index 7db4483..0000000
--- a/bin/batch/cori_knl_ctestS.sl.in.cmake
+++ /dev/null
@@ -1,16 +0,0 @@
-#!/bin/bash
-
-#SBATCH -C knl,quad, cache
-#SBATCH --nodes=1
-#SBATCH -t 00:30:00
-#SBATCH --mail-type=BEGIN,END,FAIL
-##SBATCH --mail-user=<username>@sandia.gov
-#SBATCH --export=ALL
-#SBATCH --job-name=h5_ctestS
-
-cd @HDF5_BINARY_DIR@
-CMD="ctest . -E TEST_PAR|PH5DIFF|PERFORM|ph5example -C Release -j 32 -T test"
-
-echo "Run $CMD. Test output will be in build/ctestS.out"
-$CMD  >& ctestS.out
-echo "Done running $CMD"
diff --git a/bin/batch/ctest.qsub.in.cmake b/bin/batch/ctest.qsub.in.cmake
new file mode 100755
index 0000000..702fca7
--- /dev/null
+++ b/bin/batch/ctest.qsub.in.cmake
@@ -0,0 +1,21 @@
+#!/bin/bash -l
+if [ $# -gt 0 ]; then
+    SUMMARY_FILE=$1
+fi
+ACCOUNT_ID=@ACCOUNT_ID@
+
+echo "Run parallel test command. Test output will be in build/${SUMMARY_FILE}"
+CTEST_CMD=`which ctest`
+
+#SKIPTESTS <<KEYWORD:script inserts list of skips tests here -- don't remove>>
+
+cd @HDF5_BINARY_DIR@
+if [[ $SUMMARY_FILE == *"ctestS"* ]]; then
+  CMD="${CTEST_CMD} . -E MPI_TEST_ -C Release -j 32 -T test"
+else
+  CMD="${CTEST_CMD} . -R MPI_TEST_ ${SKIP_TESTS} -C Release -T test"
+fi
+
+qsub -t 60 -n 1 -q debug-flat-quad -A ${ACCOUNT_ID} ${CMD} >& ${SUMMARY_FILE}
+
+echo "Done running ctest parallel command."
diff --git a/bin/batch/ctestP.lsf.in.cmake b/bin/batch/ctestP.lsf.in.cmake
index 2777f39..3fdd5ce 100644
--- a/bin/batch/ctestP.lsf.in.cmake
+++ b/bin/batch/ctestP.lsf.in.cmake
@@ -14,6 +14,6 @@
 
 cd @HDF5_BINARY_DIR@
 echo "Run parallel test command. Test output will be in build/ctestP.out"
-ctest . -R 'TEST_PAR|PH5DIFF|PERFORM' -E t_cache_image -C Release -T test >& ctestP.out
+ctest . -R MPI_TEST_ -C Release -T test >& ctestP.out
 
 echo "Done running ctest parallel command."
diff --git a/bin/batch/ctestP.sl.in.cmake b/bin/batch/ctestP.sl.in.cmake
index 9fed14d..6399de7 100644
--- a/bin/batch/ctestP.sl.in.cmake
+++ b/bin/batch/ctestP.sl.in.cmake
@@ -8,9 +8,7 @@
 #SBATCH --job-name=h5_ctestP
 
 cd @HDF5_BINARY_DIR@
-CMD="ctest . -R TEST_PAR|PH5DIFF|PERFORM|ph5example -E t_cache_image -C Release -T test"
+ctest . -R MPI_TEST_ -C Release -T test >& ctestP.out
 
-echo "Run $CMD. Test output will be in build/ctestP.out"
-$CMD >& ctestP.out
-echo "Done running $CMD"
+echo "Done running ctestP.sl" 
 
diff --git a/bin/batch/ctestS.lsf.in.cmake b/bin/batch/ctestS.lsf.in.cmake
index 7ef5af5..a01d39b 100644
--- a/bin/batch/ctestS.lsf.in.cmake
+++ b/bin/batch/ctestS.lsf.in.cmake
@@ -11,7 +11,7 @@
 
 cd @HDF5_BINARY_DIR@
 echo "Run command. Test output will be in build/ctestS.out"
-ctest . -E 'TEST_PAR|PH5DIFF|PERFORM' -C Release -j 32 -T test >& ctestS.out
+ctest . -E MPI_TEST_ -C Release -j 32 -T test >& ctestS.out
 
 ##$CMD  >& ctestS.out
 echo "Done running command."
diff --git a/bin/batch/ctestS.sl.in.cmake b/bin/batch/ctestS.sl.in.cmake
index 98c1bcd..4f96bb9 100644
--- a/bin/batch/ctestS.sl.in.cmake
+++ b/bin/batch/ctestS.sl.in.cmake
@@ -8,7 +8,7 @@
 #SBATCH --job-name=h5_ctestS
 
 cd @HDF5_BINARY_DIR@
-CMD="ctest . -E TEST_PAR|PH5DIFF|PERFORM|ph5example -C Release -j 32 -T test"
+CMD="ctest . -E MPI_TEST_ -C Release -j 32 -T test"
 
 echo "Run $CMD. Test output will be in build/ctestS.out"
 $CMD  >& ctestS.out
diff --git a/bin/batch/knl_ctestP.sl.in.cmake b/bin/batch/knl_ctestP.sl.in.cmake
index 5c7c83f..f985fbb 100644
--- a/bin/batch/knl_ctestP.sl.in.cmake
+++ b/bin/batch/knl_ctestP.sl.in.cmake
@@ -6,13 +6,11 @@
 #SBATCH --mail-type=BEGIN,END,FAIL
 ##SBATCH --mail-user=<username>@sandia.gov
 #SBATCH --export=ALL
-#SBATCH --job-name=h5_ctestS
+#SBATCH --job-name=h5_ctestP
 
 cd @HDF5_BINARY_DIR@
 #run parallel tests except t_cache_image test
-CMD="ctest . -R TEST_PAR|PH5DIFF|PERFORM|ph5example -E t_cache_image -C Release -T test"
+ctest . -R MPI_TEST_ -C Release -T test >& ctestP.out
 
-echo "Run $CMD. Test output will be in build/ctestP.out"
-$CMD >& ctestP.out
 echo "Done running $CMD"
 
diff --git a/bin/batch/knl_ctestS.sl.in.cmake b/bin/batch/knl_ctestS.sl.in.cmake
index 0dae31f..af6353b 100644
--- a/bin/batch/knl_ctestS.sl.in.cmake
+++ b/bin/batch/knl_ctestS.sl.in.cmake
@@ -9,7 +9,7 @@
 #SBATCH --job-name=h5_ctestS
 
 cd @HDF5_BINARY_DIR@
-CMD="ctest . -E TEST_PAR|PH5DIFF|PERFORM|ph5example -C Release -j 32 -T test"
+CMD="ctest . -E MPI_TEST_ -C Release -j 32 -T test"
 
 echo "Run $CMD. Test output will be in build/ctestS.out"
 $CMD  >& ctestS.out
diff --git a/bin/batch/ray_ctestP.lsf.in.cmake b/bin/batch/ray_ctestP.lsf.in.cmake
index 6b5316a..7067a65 100644
--- a/bin/batch/ray_ctestP.lsf.in.cmake
+++ b/bin/batch/ray_ctestP.lsf.in.cmake
@@ -15,6 +15,6 @@
 
 cd @HDF5_BINARY_DIR@
 echo "Run parallel test command. Test output will be in build/ctestP.out"
-ctest . -R 'TEST_PAR|PH5DIFF|PERFORM|ph5example' -E t_cache_image -C Release -T test >& ctestP.out
+ctest . -R 'MPI_TEST_' -C Release -T test >& ctestP.out
 
 echo "Done running ctest parallel command."
diff --git a/bin/batch/ray_ctestS.lsf.in.cmake b/bin/batch/ray_ctestS.lsf.in.cmake
index d23a513..da20438 100644
--- a/bin/batch/ray_ctestS.lsf.in.cmake
+++ b/bin/batch/ray_ctestS.lsf.in.cmake
@@ -11,7 +11,7 @@
 
 cd @HDF5_BINARY_DIR@
 echo "Run command. Test output will be in build/ctestS.out"
-ctest . -E 'TEST_PAR|PH5DIFF|PERFORM|ph5example' -C Release -j 32 -T test >& ctestS.out
+ctest . -E 'MPI_TEST_' -C Release -j 32 -T test >& ctestS.out
 
 ##$CMD  >& ctestS.out
 echo "Done running command."
diff --git a/bin/checkposix b/bin/checkposix
index 7ab741c..30128e3 100755
--- a/bin/checkposix
+++ b/bin/checkposix
@@ -13,101 +13,165 @@ require 5.003;
 # If you do not have access to either file, you may request a copy from
 # help@hdfgroup.org.
 #
-# Robb Matzke, matzke@llnl.gov
-# 30 Aug 1997
+# Dana Robinson
+# Spring 2019
+# (Original by Robb Matzke)
 #
-# Purpose: Given the names of C source files this script will print the
-#	   file name, line number, and function name of any function that
-#	   doesn't begin with the letter `h' or `H' as stipulated by the
-#	   HDF5 programming style guide.
+# Purpose:  Given the names of C source files this script will print the
+#           file name, line number, and function name of any function that
+#           doesn't begin with the letter 'h' or 'H' as stipulated by the
+#           HDF5 programming style guide.
 #
-#	   Emacs users can run this script as the compile command and
-#	   use `next-error' (usually bound to M-`) to find each name
-#	   violation.
-
-if(<>) {
-    if($ARGV =~ /\//) {
-        ($filename) = ($ARGV =~ /^.*\/([A-Za-z0-9_]*)\.c$/);
-    } else {
-        ($filename) = ($ARGV =~ /([A-Za-z0-9_]*)\.c$/);
+#           Emacs users can run this script as the compile command and
+#           use 'next-error' (usually bound to M-`) to find each name
+#           violation.
+
+use File::Basename;
+
+# Loop over all files passed to the function
+foreach $arg (@ARGV) {
+
+    # Get the filename from the path
+    $filename = fileparse($arg);
+
+    # Skip files that don't include H5private.h
+    # H5system. has to be inspected by hand since it wraps POSIX files
+    #
+    # H5detect and H5make_libsettings are created before the library exists
+    # so calls that link to function replacements won't work. We'll ignore
+    # it here.
+    #
+    # If a user specifies one file, process it no matter what so people
+    # can inspect files we normally skip (like H5system.c).
+    if($#ARGV gt 0 and $filename =~ /H5FDmulti|H5FDstdio|H5VLpassthru|H5system|H5detect|H5make_libsettings/) {
+        print "$filename is exempt from using Standard library macro wrappers\n";
+        next;
     }
 
-    if($filename =~ /H5FDmulti|H5FDstdio/) {
-        print "$ARGV is exempt from using Standard library macro wrappers\n";
-    } else {
-        while (<>) {
-
-           # Get rid of comments by removing the inside part.
-           s|/\*.*?\*/||g;
-           if ($in_comment) {
-              if (/\*\//) {
-                 s|.*?\*/||;
-                 $in_comment = 0;
-              } else {
-                 $_="\n";
-              }
-           } elsif (m|/\*|) {
-              s|/\*.*||;
-              $in_comment = 1;
-           }
-
-           # Get rid of string constants if they begin and end on this line.
-           s/([\'\"])([^\1]|\\\1)*?\1/$1$1/g;
-
-           # Get rid of preprocessor directives
-           s/^\#.*//;
-
-           # Skip callbacks invoked as methods in a struct
-           next if $_ =~ /\b(\)?->|\.)\(?([a-z_A-Z]\w*)\s*\(/;
-
-           # Now find all function calls on this line which don't start with 'H'
-           while (($name)=/\b([a-z_A-GI-Z]\w*)\s*\(/) {
-              $_ = $';
+    # Open the file
+    open(my $fh, "<", $arg) or do {
+        warn "NOTE: Unable to open $arg: !$\n";
+        next;
+    };
+
+    # Loop over all lines in the file to find undecorated functions
+    while (<$fh>) {
+
+        # Get rid of comments by removing the inside part.
+        s|/\*.*?\*/||g;
+        if ($in_comment) {
+            if (/\*\//) {
+                s|.*?\*/||;
+                $in_comment = 0;
+            } else {
+                $_="\n";
+            }
+        } elsif (m|/\*|) {
+            s|/\*.*||;
+            $in_comment = 1;
+        }
+
+        # Get rid of string constants if they begin and end on this line.
+        s/([\'\"])([^\1]|\\\1)*?\1/$1$1/g;
+
+        # Get rid of preprocessor directives
+        s/^\#.*//;
+
+        # Skip callbacks invoked as methods in a struct
+        next if $_ =~ /\b(\)?]?->|\.)\(?([a-z_A-Z]\w*)\s*\(/;
+
+        # Now find all function calls on this line which don't start with 'H'
+        while (($name)=/\b([a-z_A-GI-Z]\w*)\s*\(/) {
+            $_ = $';
               
-              # Ignore C statements that look sort of like function
-              # calls.
-              next if $name =~ /^(if|for|offsetof|return|sizeof|switch|while|void)$/;
-
-              # Ignore things that get misdetected because of the simplified
-              # parsing that takes place here.
-              next if $name =~ /^(int|herr_t|_term_interface)$/;
-
-              # These are really HDF5 functions/macros even though they don't
-              # start with `h' or `H'.
-              next if $name =~ /^FUNC_(ENTER|LEAVE)(_(NO)?API|_PACKAGE|_STATIC)?(_NOFS|_NOCLEAR|_NOINIT)?(_NOFUNC|_TAG)?$/;
-              next if $name =~ /^(BEGIN|END)_FUNC$/;
-              next if $name =~ /^U?INT(8|16|32|64)(ENCODE|DECODE)(_VAR)?$/;
-              next if $name =~ /^CI_(PRINT_STATS|INC_SRC|INC_DST)$/;
-              next if $name =~ /^(ABS|ADDR_OVERFLOW|ALL_MEMBERS|BOUND|CONSTR|DETECT_[I|F|M]|DOWN)$/;
-              next if $name =~ /^(MIN3?|MAX3?|NELMTS|POWER_OF_TWO|REGION_OVERFLOW)$/;
-              next if $name =~ /^(UNIQUE_MEMBERS)$/;
-              next if $name =~ /^addr_defined$/;
-
-              # These functions/macros are exempt.
-              next if $name =~ /^(main|[fs]?printf|va_(start|arg|end))$/;
-
-              # These are Windows system calls. Ignore them.
-              next if $name =~ /^(_get_osfhandle|GetFileInformationByHandle|SetFilePointer|GetLastError|SetEndOfFile)$/;
-              next if $name =~ /^(FindNextFile|FindClose|_tzset|Wgettimeofday|GetSystemTimeAsFileTime|Wgetlogin|GetUserName)$/;
-
-              # These are MPI function calls. Ignore them.
-              next if $name =~ /^(MPI_|MPE_)/;
-
-              # These are POSIX threads function calls. Ignore them.
-              next if $name =~ /^pthread_/;
-
-              # These are Windows threads function calls. Ignore them.
-              next if $name =~ /^(_beginthread|(Initialize|Enter|Leave)CriticalSection|TlsAlloc)$/;
-
-              # These are zlib & szlib function calls. Ignore them.
-              next if $name =~ /^(inflate|SZ_)/;
-              next if $name =~ /^compress2$/;
-
-              print "$ARGV:$.: $name\n";
-           }
-
-        } continue {
-           close ARGV if eof;       # reset line number
+            # Ignore C statements that look sort of like function
+            # calls.
+            next if $name =~ /^(if|for|offsetof|return|sizeof|switch|while|void)$/;
+
+            # Ignore things that get misdetected because of the simplified
+            # parsing that takes place here.
+            next if $name =~ /^(int|herr_t|_term_interface|_term_package)$/;
+
+            # These are really HDF5 functions/macros even though they don't
+            # start with `h' or `H'.
+            next if $name =~ /^FUNC_(ENTER|LEAVE)(_(NO)?API|_PACKAGE|_STATIC)?(_NOFS|_NOCLEAR|_NOINIT)?(_NOFUNC|_TAG)?$/;
+            next if $name =~ /^(BEGIN|END)_FUNC$/;
+            next if $name =~ /^U?INT(8|16|32|64)(ENCODE|DECODE)(_VAR)?$/;
+            next if $name =~ /^CI_(PRINT_STATS|INC_SRC|INC_DST)$/;
+            next if $name =~ /^(ABS|ADDR_OVERFLOW|ALL_MEMBERS|BOUND|CONSTR|DETECT_[I|F|M]|DOWN)$/;
+            next if $name =~ /^(MIN3?|MAX3?|NELMTS|POWER_OF_TWO|REGION_OVERFLOW)$/;
+            next if $name =~ /^(UNIQUE_MEMBERS|S_ISDIR)$/;
+            next if $name =~ /^addr_defined$/;
+
+            # These functions/macros are exempt.
+            # op, cb, and OP are often spuriously flagged so ignore them.
+            next if $name =~ /^(main|op|cb|OP)$/;
+
+            # This often appears in preprocessor lines that span multiple lines
+            next if $name =~ /^(defined)$/;
+
+            # These are Windows system calls. Ignore them.
+            next if $name =~ /^(_get_osfhandle|GetFileInformationByHandle|SetFilePointer|GetLastError|SetEndOfFile)$/;
+            next if $name =~ /^(FindNextFile|FindClose|_tzset|Wgettimeofday|GetSystemTimeAsFileTime|Wgetlogin|GetUserName)$/;
+            next if $name =~ /^(DeleteCriticalSection|TlsFree|TlsGetValue|CreateThread)$/;
+            next if $name =~ /^(ExpandEnvironmentStringsA|LockFileEx|UnlockFileEx)$/;
+            next if $name =~ /^(DllMain|LocalAlloc|LocalFree)$/;
+            next if $name =~ /^(FindFirstFileA|FindNextFileA)$/;
+            next if $name =~ /^(_beginthread|(Initialize|Enter|Leave)CriticalSection|TlsAlloc)$/;
+
+            # These are MPI function calls. Ignore them.
+            next if $name =~ /^(MPI_|MPE_)/;
+
+            # These are POSIX threads function calls. Ignore them.
+            next if $name =~ /^pthread_/;
+
+            # These are zlib & szlib function calls. Ignore them.
+            next if $name =~ /^(inflate|SZ_)/;
+            next if $name =~ /^compress2$/;
+
+            # These is an H5Dfill function. Ignore it in this file.
+            if($filename =~ /H5Dfill/) {
+                next if $name =~ /^(alloc_func)$/;
+            }
+
+            # These are H5Zscaleoffset functions. Ignore them in this file.
+            if($filename =~ /H5Zscaleoffset/) {
+                next if $name =~ /^(pow_fun|round_fun|abs_fun|lround_fun|llround_fun)$/;
+            }
+
+            # TESTING (not comprehensive - just noise reduction)
+            
+            # Test macros and functions (testhdf5.h)
+            next if $name =~ /^(AddTest|TestErrPrintf|TestSummary|TestCleanup|TestShutdown)$/;
+            next if $name =~ /^(CHECK|CHECK_PTR|CHECK_PTR_NULL|CHECK_PTR_EQ|CHECK_I)$/;
+            next if $name =~ /^(VERIFY|VERIFY_STR|VERIFY|TYPE|MESSAGE|ERROR)$/;
+
+            # Test macros and functions (h5test.h)
+            next if $name =~ /^(TESTING|PASSED|SKIPPED|FAIL_PUTS_ERROR|FAIL_STACK_ERROR|TEST_ERROR)$/;
+            next if $name =~ /^(GetTestExpress)$/;
+
+            # Ignore functions that start with test_ or check_
+            next if $name =~ /^test_/;
+            next if $name =~ /^check_/;
+
+            # Ignore functions that start with h5_
+            next if $name =~ /^h5_/;
+
+            # Ignore usage functions
+            next if $name =~ /^usage$/;
+
+            print "$filename:$.: $name\n";
         }
+
     }
+
+    # Close the file
+    close($fh);
+}
+
+if($#ARGV gt 0) {
+    print "\n";
+    print "NOTE:\n";
+    print "If any files were skipped due to being exempt, you can inspect them manually\n";
+    print "by using this script on them one at a time, which will always process the file.\n";
 }
diff --git a/tools/src/misc/h5cc.in b/bin/h5cc.in
index 9c4e3ca..9c4e3ca 100644
--- a/tools/src/misc/h5cc.in
+++ b/bin/h5cc.in
diff --git a/tools/src/misc/h5redeploy.in b/bin/h5redeploy.in
index 242459a..242459a 100644
--- a/tools/src/misc/h5redeploy.in
+++ b/bin/h5redeploy.in
diff --git a/bin/snapshot b/bin/snapshot
index 5900728..1218caa 100755
--- a/bin/snapshot
+++ b/bin/snapshot
@@ -130,10 +130,10 @@ DISPLAYUSAGE()
     set -
     cat <<EOF
 Usage: $PROGNAME [all] [checkout] [ftp <URL> [diff] [test] [srcdir] [release] [help]
-	[clean] [distclean] [echo] [deploy <dir>] [deploydir <dir>]
-	[zlib <zlib_path>] [releasedir <dir>] [srcdirname <dir>] [check-vfd]
-        [check-vol]
-	[exec <command>] [module-load <module-list>] [op-configure <option>] 
+        [clean] [distclean] [echo] [deploy <dir>] [deploydir <dir>]
+        [zlib <zlib_path>] [releasedir <dir>] [srcdirname <dir>] [check-vfd]
+        [check-passthrough-vol]
+        [exec <command>] [module-load <module-list>] [op-configure <option>]
         [--<option>]
     all:      Run all commands (checkout, test & release)
               [Default is all]
@@ -150,8 +150,8 @@ Usage: $PROGNAME [all] [checkout] [ftp <URL> [diff] [test] [srcdir] [release] [h
     setenv <name> <value>:
               Set environment variable <name> to <value>.
     setenvN <N> <name> <value> ...:
-	      Set environment variable with <N> values.
-	      E.g., setenvN 3 x a b c is same as setenv x="a b c".
+              Set environment variable with <N> values.
+              E.g., setenvN 3 x a b c is same as setenv x="a b c".
     srcdir:   Use srcdir option (does not imply other commands)
               "snapshot srcdir" is equivalent to "snapshot srcdir all"
               "snapshot srcdir checkout" is equivalent to "snapshot checkout"
@@ -169,9 +169,12 @@ Usage: $PROGNAME [all] [checkout] [ftp <URL> [diff] [test] [srcdir] [release] [h
               Use <dir> as the release directory
               [Default is $ReleaseDir_default]
     check-vfd:
-	      Run make check-vfd instead of just make check.
-    check-vol:
-	      Run make check-vol instead of just make check.
+              Run make check-vfd instead of just make check.
+    check-passthrough-vol:
+              Run make check-passthrough-vol instead of just make check.
+              NOTE: Will only succeed with passthrough VOL connectors
+              that use the native VOL connector as the terminal
+              connector.
     exttest <testscript>;
               Run testscript;
     exec <command>:
@@ -425,8 +428,8 @@ while [ $# -gt 0 ] ; do
 	check-vfd)
 	    CHECKVAL=check-vfd
 	    ;;
-	check-vol)
-	    CHECKVAL=check-vol
+	check-passthrough-vol)
+	    CHECKVAL=check-passthrough-vol
 	    ;;
         module-load)
             shift
diff --git a/bin/warnhist b/bin/warnhist
new file mode 100755
index 0000000..5750c77
--- /dev/null
+++ b/bin/warnhist
@@ -0,0 +1,514 @@
+#!/usr/bin/perl -w
+require 5.003;
+
+#
+# Copyright by The HDF Group.
+# All rights reserved.
+#
+# This file is part of HDF5.  The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the files COPYING and Copyright.html.  COPYING can be found at the root
+# of the source code distribution tree; Copyright.html can be found at the
+# root level of an installed copy of the electronic HDF5 document set and
+# is linked from the top-level documents page.  It can also be found at
+# http://hdfgroup.org/HDF5/doc/Copyright.html.  If you do not have
+# access to either file, you may request a copy from help@hdfgroup.org.
+#
+# Quincey Koziol, koziol@hdfgroup.org
+#  9 Aug 2013
+#
+# Purpose: Given an input file containing the output from a build of the
+#	   library, gather the file names and line numbers, alias
+#          identical types of warnings together into a single bin and
+#          report the number of warnings for each type of warning, each file
+#          and the total count of warnings
+
+# Perl modules/settings
+use strict;
+use Getopt::Std;
+
+# Global variables, for accumulating information
+my $totalcount = 0;
+my %warn_count = ();
+my $warncount;
+my %warn_file = ();
+my %warn_file_line = ();
+my %file_count = ();
+my $filecount;
+my $ignorecount = 0;
+my @ignorenames;
+my %ignored_files = ();
+my %warn_file_indices = ();
+my %file_warn_indices = ();
+my %file_warn = ();
+my %file_warn_line = ();
+my $current_warning = 0;
+my $current_file = 0;
+my $warn_index;
+my $last_c_name;
+my $last_fort_name;
+my $last_fort_line;
+
+# declare the Perl command line flags/options we want to allow
+my %options=();
+getopts("FWht:w:f:i:l", \%options);
+
+# Display usage, if requested
+if($options{h}) {
+    print "Usage: 'warnhist [-h] [-t <prefix>] [-w <n>] [-W] [-f <n>] [-F] [-l] [-i <name list> [file]'\n";
+    print "\t-h\tDisplay this usage\n";
+    print "\t-t <prefix>\tTrim pathname prefix from filenames, <prefix>\n";
+    print "\t-w <n>\tDisplay files for a given warning index list, <n>\n";
+    print "\t\t<n> can be a single value, a range, or a comma separated list\n";
+    print "\t\tFor example: '0' or '0,4' or '8-10' or '0,2-4,8-10,13'\n";
+    print "\t-W\tDisplay files for all warnings\n";
+    print "\t-f <n>\tDisplay warnings for a given file index list, <n>\n";
+    print "\t\t<n> can be a single value, a range, or a comma separated list\n";
+    print "\t\tFor example: '0' or '0,4' or '8-10' or '0,2-4,8-10,13'\n";
+    print "\t-F\tDisplay warnings for all files\n";
+    print "\t-l\tDisplay line nunbers for file/warning\n";
+    print "\t-i <name list>\tIgnore named files, <name list>\n";
+    print "\t\t<name list> is a comma separated list, with no spaces\n";
+    print "\t\tFor example: 'H5LTparse' or 'H5LTparse,H5LTanalyze'\n";
+    print "\tfile\tFilename containing build output\n";
+    print "\t\tIf no file is given, standard input is used.\n";
+    exit;
+}
+
+# Parse list of file names to ignore
+if(exists $options{i}) {
+    @ignorenames = split /,/, $options{i};
+#print @ignorenames;
+}
+
+# Parse list of warning indices to expand file names
+if(exists $options{w}) {
+    my @tmp_indices;
+
+    @tmp_indices = split /,/, $options{w};
+#print @tmp_indices;
+    for my $x (@tmp_indices) {
+#print "x = '$x'\n";
+        if($x =~ /\-/) {
+            my $start_index;
+            my $end_index;
+
+#print "matched = '$x'\n";
+            ($start_index, $end_index) = split /\-/, $x;
+#print "start_index = '$start_index', end_index = '$end_index'\n";
+            for my $y ($start_index..$end_index) {
+#print "y = '$y'\n";
+                if(!(exists $warn_file_indices{$y})) {
+                    $warn_file_indices{$y} = $y;
+                }
+            }
+        }
+        else {
+            if(!(exists $warn_file_indices{$x})) {
+                $warn_file_indices{$x} = $x;
+            }
+        }
+    }
+#foreach (sort keys %warn_file_indices) {
+#    print "$_ : $warn_file_indices{$_}\n";
+#}
+}
+
+# Parse list of file indices to expand warnings
+if(exists $options{f}) {
+    my @tmp_indices;
+
+    @tmp_indices = split /,/, $options{f};
+#print @tmp_indices;
+    for my $x (@tmp_indices) {
+#print "x = '$x'\n";
+        if($x =~ /\-/) {
+            my $start_index;
+            my $end_index;
+
+#print "matched = '$x'\n";
+            ($start_index, $end_index) = split /\-/, $x;
+#print "start_index = '$start_index', end_index = '$end_index'\n";
+            for my $y ($start_index..$end_index) {
+#print "y = '$y'\n";
+                if(!(exists $file_warn_indices{$y})) {
+                    $file_warn_indices{$y} = $y;
+                }
+            }
+        }
+        else {
+            if(!(exists $file_warn_indices{$x})) {
+                $file_warn_indices{$x} = $x;
+            }
+        }
+    }
+#foreach (sort keys %warn_file_indices) {
+#    print "$_ : $warn_file_indices{$_}\n";
+#}
+}
+
+PARSE_LINES:
+while (<>) {
+    my $name;
+    my $line;
+    my $prev_line;
+    my $toss;
+    my $offset;
+    my $warning;
+    my $extra;
+
+    # Retain last FORTRAN compile line, which comes a few lines before warning
+    if($_ =~ /.*\.[fF]90:.*/) {
+        ($last_fort_name, $last_fort_line, $toss) = split /\:/, $_;
+        ($last_fort_line, $toss) = split /\./, $last_fort_line;
+    }
+
+    # Retain last C compile line, which possibly comes a few lines before warning
+    if($_ =~ /.*[A-Za-z0-9_]\.c:.*/) {
+        ($last_c_name, $toss) = split /\:/, $_;
+    }
+
+    next if $_ !~ /[Ww]arning:/;
+
+    # Skip warnings from linker
+    next if $_ =~ /ld: warning:/;
+
+    # Check for weird formatting of warning message
+    if($_ =~ /^cc1: warning:.*/) {
+        $name = $last_c_name;
+        $line = "??";
+        ($toss, $toss, $warning, $extra) = split /\:/, $_;
+    # Check for FORTRAN warning output
+    } elsif($_ =~ /^Warning:.*/) {
+        $name = $last_fort_name;
+        $line = $last_fort_line;
+        ($toss, $warning, $extra) = split /\:/, $_;
+#print "1:",$.,":",$_;
+#        $_ = <>;
+#print "2:",$.,":",$_;
+#        if($_ =~ /^\sFC.*/) {
+#            $_ = <>;
+#print "3:",$.,":",$_;
+#        }
+#        ($name, $line, $toss) = split /\:/, $_;
+#print "4:","'",$name,"'","-","'",$line,"'","\n";
+        # Check for improperly parsed filename or line
+        if($name =~ /^$/) {
+            print "Filename is a null string! Input line #$. is: '$_'";
+            next
+        }
+        if($line =~ /^$/) {
+            print "Line is a null string! Input line #$. is: '$_'";
+            next
+        }
+    } else {
+        # Check for 'character offset' field
+        if($_ =~ /^.*[0-9]+\:[0-9]+\:/) {
+            ($name, $line, $offset, $toss, $warning, $extra) = split /\:/, $_;
+        } else {
+            ($name, $line, $toss, $warning, $extra) = split /\:/, $_;
+        }
+    }
+
+    # Check for extra ':' followed by more text in original warning string,
+    #  and append the ':' and text back onto the parsed warning
+    #  (Use 'length $extra' idiom to avoid warning when $extra is undefined)
+    if(length $extra ) {
+        $warning = join ':', $warning, $extra;
+    }
+
+    # Trim leading '..' paths from filename
+    while($name =~ /^\.\.\//) {
+        $name =~ s/^\.\.\///g;
+    }
+
+    # Check for trimming prefix
+    if((exists $options{t}) && ($name =~ /$options{t}/)) {
+        $name =~ s/^$options{t}\///g;
+    }
+
+    # Check for ignored file
+    if(exists $options{i}) {
+        for my $x (@ignorenames) {
+#print "x = '$x'\n";
+            if($name =~ /$x/) {
+# print "matched name = '$name'\n";
+                $ignorecount++;
+                if(!(exists $ignored_files{$name})) {
+                    $ignored_files{$name} = $name;
+                }
+                next PARSE_LINES;
+            }
+        }
+    }
+
+    # Check for improperly parsed warning (usually an undefined warning string)
+    if(!defined $warning) {
+        print "Warning Undefined! Input line is: '$_'";
+        next
+    }
+
+    # Get rid of leading & trailing whitespace
+    $warning =~ s/^\s//g;
+    $warning =~ s/\s$//g;
+
+    # Check for improperly parsed warning
+    if($warning =~ /^$/) {
+        print "Warning is a null string! Input line is: '$_'";
+        next
+    }
+
+    # Convert all quotes to '
+    $warning =~ s/‘/'/g;
+    $warning =~ s/’/'/g;
+
+    # Skip supplemental warning message
+    next if $warning =~ /near initialization for/;
+
+    # Skip GCC warning that should be a note
+    next if $_ =~ /\(this will be reported only once per input file\)/;
+
+    # Eliminate "{aka <some type>}" info
+    if($warning =~ /\s\{aka [A-Za-z_0-9\s\*]*\}'/) {
+        $warning =~ s/\s\{aka [A-Za-z_0-9\s\*]*\}//g;
+    }
+
+    # Genericize warnings
+    if($warning =~ /variable '[A-Za-z_0-9]*' set but not used.*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /unused variable '[A-Za-z_0-9]*'.*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /implicit conversion from '[A-Za-z_0-9]*' to '[A-Za-z_0-9]*' when passing argument to function.*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /implicit conversion from '[A-Za-z_0-9]*' to '[A-Za-z_0-9]*' to match other operand of binary expression.*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /conversion to '[A-Za-z_0-9\s]*' from '[A-Za-z_0-9\s]*' may alter its value.*/) {
+        $warning =~ s/'[A-Za-z_0-9\s]*'/'-'/g;
+    } elsif($warning =~ /conversion to '[A-Za-z_0-9\s]*' from '[A-Za-z_0-9\s]*' may change the sign of the result.*/) {
+        $warning =~ s/'[A-Za-z_0-9\s]*'/'-'/g;
+    } elsif($warning =~ /passing argument [0-9]* of '[A-Za-z_0-9\s]*' discards '[A-Za-z_0-9\s]*'.*/) {
+        $warning =~ s/passing argument [0-9]*/passing argument -/g;
+        $warning =~ s/'[A-Za-z_0-9\s]*'/'-'/g;
+    } elsif($warning =~ /'[A-Za-z_0-9\s]*' defined but not used.*/) {
+        $warning =~ s/'[A-Za-z_0-9\s]*'/'-'/g;
+    } elsif($warning =~ /cast discards '[A-Za-z_0-9\(\)\s]*'.*/) {
+        $warning =~ s/'[A-Za-z_0-9\(\)\s]*'/'-'/g;
+    } elsif($warning =~ /size of '[A-Za-z_0-9\(\)\s\*]*' is [0-9]* bytes.*/) {
+        $warning =~ s/is [0-9]* bytes/is - bytes/g;
+        $warning =~ s/'[A-Za-z_0-9\(\)\s\*]*'/'-'/g;
+    } elsif($warning =~ /passing argument [0-9]* of '[A-Za-z_0-9\(\)\s]*' from incompatible.*/) {
+        $warning =~ s/passing argument [0-9]*/passing argument -/g;
+        $warning =~ s/'[A-Za-z_0-9\(\)\s]*'/'-'/g;
+    } elsif($warning =~ /stack usage is [0-9]* bytes.*/) {
+        $warning =~ s/stack usage is [0-9]*/stack usage is -/g;
+    } elsif($warning =~ /stack usage might be [0-9]* bytes.*/) {
+        $warning =~ s/stack usage might be [0-9]*/stack usage might be -/g;
+    } elsif($warning =~ /the frame size of [0-9]* bytes is larger than [0-9]* bytes.*/) {
+        $warning =~ s/the frame size of [0-9]* bytes is larger than [0-9]*/the frame size of - bytes is larger than -/g;
+    } elsif($warning =~ /enumeration value '[A-Za-z_0-9\s]*' not handled in switch.*/) {
+        $warning =~ s/'[A-Za-z_0-9\s]*'/'-'/g;
+    } elsif($warning =~ /"[A-Za-z_0-9\s]*" is not defined.*/) {
+        $warning =~ s/"[A-Za-z_0-9\s]*"/"-"/g;
+    } elsif($warning =~ /macro "[A-Za-z_0-9\s]*" is not used.*/) {
+        $warning =~ s/"[A-Za-z_0-9\s]*"/"-"/g;
+    } elsif($warning =~ /unused parameter '[A-Za-z_0-9\s]*'.*/) {
+        $warning =~ s/'[A-Za-z_0-9\s]*'/'-'/g;
+    } elsif($warning =~ /request for implicit conversion from '[A-Za-z_0-9\s\*]*' to '[A-Za-z_0-9\s\<\>\[\]\(\)\*]*' not permitted in C\+\+.*/) {
+        $warning =~ s/'[A-Za-z_0-9\s\*\<\>\[\]\(\)]*'/'-'/g;
+    } elsif($warning =~ /no previous prototype for '[A-Za-z_0-9\s]*'.*/) {
+        $warning =~ s/'[A-Za-z_0-9\s]*'/'-'/g;
+    } elsif($warning =~ /declaration of '[A-Za-z_0-9\s]*' shadows a previous local.*/) {
+        $warning =~ s/'[A-Za-z_0-9\s]*'/'-'/g;
+    } elsif($warning =~ /cast from function call of type '[A-Za-z_0-9\s\*]*' to non-matching type '[A-Za-z_0-9\s\*]*'.*/) {
+        $warning =~ s/'[A-Za-z_0-9\s\*]*'/'-'/g;
+    } elsif($warning =~ /'[A-Za-z_0-9\s]*' declared '[A-Za-z_0-9\s]*' but never defined.*/) {
+        $warning =~ s/'[A-Za-z_0-9\s]*'/'-'/g;
+    } elsif($warning =~ /declaration of '[A-Za-z_0-9\s]*' shadows a global declaration.*/) {
+        $warning =~ s/'[A-Za-z_0-9\s]*'/'-'/g;
+    } elsif($warning =~ /typedef '[A-Za-z_0-9\s]*' locally defined but not used.*/) {
+        $warning =~ s/'[A-Za-z_0-9\s]*'/'-'/g;
+    } elsif($warning =~ /format '%[a-z]*' expects argument of type '[A-Za-z_0-9\s\*]*', but argument [0-9]* has type '[A-Za-z_0-9\s\*\(\),]*'.*/) {
+        $warning =~ s/but argument [0-9]*/but argument -/g;
+        $warning =~ s/'[%A-Za-z_0-9\s\*\(\),]*'/'-'/g;
+    } elsif($warning =~ /conversion to '[A-Za-z_0-9\s]*' alters '[A-Za-z_0-9\s]*' constant value.*/) {
+        $warning =~ s/'[A-Za-z_0-9\s]*'/'-'/g;
+    } elsif($warning =~ /to be safe all intermediate pointers in cast from '[A-Za-z_0-9\s\*]*' to '[A-Za-z_0-9\s\*]*' must be 'const' qualified.*/) {
+        $warning =~ s/'[A-Za-z_0-9\s\*]*'/'-'/g;
+    } elsif($warning =~ /identifier '[A-Za-z_0-9]*' conflicts with C\+\+ keyword.*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /nested extern declaration of '[A-Za-z_0-9]*'.*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /Procedure '[A-Za-z_0-9]*' called with an implicit interface.*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /Unused dummy argument '[A-Za-z_0-9]*'.*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /Unused parameter '[A-Za-z_0-9]*' declared at.*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /Unused variable '[A-Za-z_0-9]*' declared at.*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /Inequality comparison for REAL\([0-9]*\) at.*/) {
+        $warning =~ s/REAL\([0-9]*\)/REAL\(-\)/g;
+    } elsif($warning =~ /Possible change of value in conversion from INTEGER\([0-9]*\) to (INTEGER|REAL)\([0-9]*\) at.*/) {
+        $warning =~ s/INTEGER\([0-9]*\)/INTEGER\(-\)/g;
+        $warning =~ s/REAL\([0-9]*\)/REAL\(-\)/g;
+    } elsif($warning =~ /passing argument [0-9]* of '[A-Za-z_0-9]*' with different width due to prototype.*/) {
+        $warning =~ s/passing argument [0-9]*/passing argument -/g;
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /passing argument [0-9]* of '[A-Za-z_0-9]*' as unsigned due to prototype.*/) {
+        $warning =~ s/passing argument [0-9]*/passing argument -/g;
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /passing argument [0-9]* of '[A-Za-z_0-9]*' discards qualifiers from pointer target type.*/) {
+        $warning =~ s/passing argument [0-9]*/passing argument -/g;
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /passing argument [0-9]* of '[A-Za-z_0-9]*' as floating rather than integer due to prototype.*/) {
+        $warning =~ s/passing argument [0-9]*/passing argument -/g;
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /passing argument [0-9]* of '[A-Za-z_0-9]*' as 'float' rather than 'double' due to prototype.*/) {
+        $warning =~ s/passing argument [0-9]*/passing argument -/g;
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/;
+    } elsif($warning =~ /passing argument [0-9]* of '[A-Za-z_0-9]*' as signed due to prototype.*/) {
+        $warning =~ s/passing argument [0-9]*/passing argument -/g;
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /format '\%[A-Za-z0-9]*' expects type '[a-z][a-z\s\*]*', but argument [0-9]* has type '[a-z][a-z\(\)_,\s\*]*'.*/) {
+        $warning =~ s/but argument [0-9]*/but argument -/g;
+        $warning =~ s/'\%[A-Za-z0-9]*'/'\%-'/g;
+        $warning =~ s/'[a-z][a-z_,\s\*\(\)]*'/'-'/g;
+    } elsif($warning =~ /implicit declaration of function '[A-Za-z_0-9]*'.*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /'[A-Za-z_\.\[\]0-9]*' may be used uninitialized in this function.*/) {
+        $warning =~ s/'[A-Za-z_\.\[\]0-9]*'/'-'/g;
+    } elsif($warning =~ /redundant redeclaration of '[A-Za-z_0-9]*'.*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /declaration of '[A-Za-z_0-9]*' shadows a parameter.*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /ISO C90 does not support the '[a-z]*' gnu_scanf length modifier.*/) {
+        $warning =~ s/'[a-z]*'/'-'/g;
+    } elsif($warning =~ /ISO C90 does not support the '[a-z]*' gnu_printf length modifier.*/) {
+        $warning =~ s/'[a-z]*'/'-'/g;
+    } elsif($warning =~ /ISO C90 does not support the '%[a-z]*' gnu_printf format.*/) {
+        $warning =~ s/'%[a-z]*'/'%-'/g;
+    } elsif($warning =~ /string length '[0-9]*' is greater than the length.*/) {
+        $warning =~ s/string length '[0-9]*' is/string length '-' is/g;
+    } elsif($warning =~ /enum conversion when passing argument [0-9]* of '[A-Za-z_0-9]*' is invalid.*/) {
+        $warning =~ s/passing argument [0-9]*/passing argument -/g;
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /duplicate declaration of '[A-Za-z_0-9]*' is invalid in.*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /Variable '[A-Za-z_0-9]*' at \([0-9]*\) is a dummy argument of the BIND\(C\) procedure '[A-Za-z_0-9]*' but may not be C interoperable.*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+        $warning =~ s/at \([0-9]*\)/at \(-\)/g;
+    } elsif($warning =~ /Variable '[A-Za-z_0-9]*' at \([0-9]*\) may not be a C interoperable kind but it is BIND\(C\).*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+        $warning =~ s/at \([0-9]*\)/at \(-\)/g;
+    } elsif($warning =~ /Component '[A-Za-z_0-9]*' in derived type '[A-Za-z_0-9]*' at \([0-9]*\) may not be C interoperable, even though derived type '[A-Za-z_0-9]*' is BIND\(C\).*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+        $warning =~ s/at \([0-9]*\)/at \(-\)/g;
+    } elsif($warning =~ /function might be candidate for attribute '[A-Za-z_0-9]*' if it is known to return normally \[-Wsuggest-attribute=[A-Za-z_0-9]*\].*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+        $warning =~ s/=[A-Za-z_0-9]*\]/=-\]/g;
+    } elsif($warning =~ /function might be candidate for attribute '[A-Za-z_0-9]*' \[-Wsuggest-attribute=[A-Za-z_0-9]*\].*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+        $warning =~ s/=[A-Za-z_0-9]*\]/=-\]/g;
+    } elsif($warning =~ /passing argument [0-9]+ of '[A-Za-z_0-9]*' makes integer from pointer without a cast \[-Wint-conversion\].*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+        $warning =~ s/[0-9]+/-/g;
+    } elsif($warning =~ /function '[A-Za-z_0-9]*' might be a candidate for '[A-Za-z_0-9]*' format attribute \[-Wsuggest-attribute=format\].*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /inlining failed in call to '[A-Za-z_0-9]*': call is unlikely and code size would grow \[-Winline\].*/) {
+        $warning =~ s/'[A-Za-z_0-9]*'/'-'/g;
+    } elsif($warning =~ /'%[0-9]*[\.\*]*[0-9]*[dfsu]' directive writing between [0-9]+ and [0-9]+ bytes into a region of size [0-9]+ \[-Wformat-overflow=\].*/) {
+        $warning =~ s/'%[0-9]*[\.\*]*[0-9]*[dfsu]'/'-'/g;
+        $warning =~ s/[0-9]+/-/g;
+    } elsif($warning =~ /'%[0-9]*[\.\*]*[0-9]*[dfsu]' directive writing between [0-9]+ and [0-9]+ bytes into a region of size between [0-9]+ and [0-9]+ \[-Wformat-overflow=\].*/) {
+        $warning =~ s/'%[0-9]*[\.\*]*[0-9]*[dfsu]'/'-'/g;
+        $warning =~ s/[0-9]+/-/g;
+    } elsif($warning =~ /'%[0-9]*[\.\*]*[0-9]*[dfsu]' directive output may be truncated writing between [0-9]+ and [0-9]+ bytes into a region of size [0-9]+ \[-Wformat-truncation=\].*/) {
+        $warning =~ s/'%[0-9]*[\.\*]*[0-9]*[dfsu]'/'-'/g;
+        $warning =~ s/[0-9]+/-/g;
+    } elsif($warning =~ /'%[0-9]*[\.\*]*[0-9]*[dfsu]' directive output may be truncated writing up to [0-9]+ bytes into a region of size [0-9]+ \[-Wformat-truncation=\].*/) {
+        $warning =~ s/'%[0-9]*[\.\*]*[0-9]*[dfsu]'/'-'/g;
+        $warning =~ s/[0-9]+/-/g;
+    } elsif($warning =~ /'%[0-9]*[\.\*]*[0-9]*[dfsu]' directive output may be truncated writing between [0-9]+ and [0-9]+ bytes into a region of size between [0-9]+ and [0-9]+ \[-Wformat-truncation=\].*/) {
+        $warning =~ s/'%[0-9]*[\.\*]*[0-9]*[dfsu]'/'-'/g;
+        $warning =~ s/[0-9]+/-/g;
+    }
+
+    # Increment count for [generic] warning
+    $warn_count{$warning}++;
+    $warn_file{$warning}{$name}++;
+    push(@{ $warn_file_line{$warning}{$name} }, $line);
+
+    # Increment count for filename
+    $file_count{$name}++;
+    $file_warn{$name}{$warning}++;
+    push(@{ $file_warn_line{$name}{$warning} }, $line);
+
+    # Increment total count of warnings
+    $totalcount++;
+
+#    print "name = $name\n";
+#    print "line = $line\n";
+#    print "offset = $offset\n";
+#    print "warning = \"$warning\"\n";
+}
+
+print "Total [non-ignored] warnings: $totalcount\n";
+print "Total ignored warnings: $ignorecount\n";
+$warncount = keys %warn_count;
+print "Total unique kinds of warnings: $warncount\n";
+$filecount = keys %file_count;
+print "Total files with warnings: $filecount\n\n";
+
+# Print warnings in decreasing frequency
+print "# of Warnings by frequency (file count)\n";
+print "=======================================\n";
+for my $x (sort {$warn_count{$b} <=> $warn_count{$a}} keys(%warn_count)) {
+    printf ("[%2d] %4d (%2d) - %s\n", $current_warning++, $warn_count{$x}, scalar(keys %{$warn_file_line{$x}}), $x);
+    if((exists $options{W}) || (exists $options{w})) {
+        my $curr_index = $current_warning - 1;
+
+        if((exists $warn_file_indices{$curr_index}) && $curr_index == $warn_file_indices{$curr_index}) {
+            for my $y (sort {$warn_file{$x}{$b} <=> $warn_file{$x}{$a}} keys(%{$warn_file{$x}})) {
+                printf ("\t%4d - %s\n", $warn_file{$x}{$y}, $y);
+                if(exists $options{l}) {
+                    printf ("\t\tLines: ");
+                    for my $z ( @{ $warn_file_line{$x}{$y} } ) {
+                        printf ("%s, ", $z);
+                    }
+                    printf("\n");
+                }
+            }
+        }
+    }
+}
+
+# Print warnings in decreasing frequency, by filename
+print "\n# of Warnings by filename (warning type)\n";
+print   "========================================\n";
+for my $x (sort {$file_count{$b} <=> $file_count{$a}} keys(%file_count)) {
+    printf ("[%3d] %4d (%2d) - %s\n", $current_file++, $file_count{$x}, scalar(keys %{$file_warn_line{$x}}), $x);
+    if((exists $options{F}) || (exists $options{f})) {
+        my $curr_index = $current_file - 1;
+
+        if((exists $file_warn_indices{$curr_index}) && $curr_index == $file_warn_indices{$curr_index}) {
+            for my $y (sort {$file_warn{$x}{$b} <=> $file_warn{$x}{$a}} keys(%{$file_warn{$x}})) {
+                printf ("\t%4d - %s\n", $file_warn{$x}{$y}, $y);
+                if(exists $options{l}) {
+                    printf ("\t\tLines: ");
+                    for my $z ( @{ $file_warn_line{$x}{$y} } ) {
+                        printf ("%s, ", $z);
+                    }
+                    printf("\n");
+                }
+            }
+        }
+    }
+}
+
+# Print names of files that were ignored
+print "\nIgnored filenames\n";
+print   "=================\n";
+for my $x (sort keys(%ignored_files)) {
+    print "$x\n";
+}
+
diff --git a/c++/Makefile.am b/c++/Makefile.am
index 94fbefc..319ce6e 100644
--- a/c++/Makefile.am
+++ b/c++/Makefile.am
@@ -18,9 +18,21 @@
 
 include $(top_srcdir)/config/commence.am
 
+if BUILD_TESTS_CONDITIONAL
+   TEST_DIR = test
+else
+   TEST_DIR=
+endif
+
 ## Only recurse into subdirectories if C++ interface is enabled.
 if BUILD_CXX_CONDITIONAL
-   SUBDIRS=src test
+   SUBDIRS=src $(TEST_DIR)
+
+# Test with just the native connector, with a single pass-through connector
+# and with a doubly-stacked pass-through.
+VOL_LIST = native "pass_through under_vol=0;under_info={}" \
+           "pass_through under_vol=505;under_info={under_vol=0;under_info={}}"
+
 endif
 DIST_SUBDIRS = src test examples
 
diff --git a/c++/examples/CMakeLists.txt b/c++/examples/CMakeLists.txt
index d3a18f2..2088019 100644
--- a/c++/examples/CMakeLists.txt
+++ b/c++/examples/CMakeLists.txt
@@ -34,17 +34,27 @@ set (tutr_examples
 
 foreach (example ${examples})
   add_executable (cpp_ex_${example} ${HDF5_CPP_EXAMPLES_SOURCE_DIR}/${example}.cpp)
-  target_include_directories(cpp_ex_${example} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
-  TARGET_C_PROPERTIES (cpp_ex_${example} STATIC)
-  target_link_libraries (cpp_ex_${example} PRIVATE ${HDF5_CPP_LIB_TARGET} ${HDF5_LIB_TARGET})
+  target_include_directories (cpp_ex_${example} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  if (NOT BUILD_SHARED_LIBS)
+    TARGET_C_PROPERTIES (cpp_ex_${example} STATIC)
+    target_link_libraries (cpp_ex_${example} PRIVATE ${HDF5_CPP_LIB_TARGET} ${HDF5_LIB_TARGET})
+  else ()
+    TARGET_C_PROPERTIES (cpp_ex_${example} SHARED)
+    target_link_libraries (cpp_ex_${example} PRIVATE ${HDF5_CPP_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
+  endif ()
   set_target_properties (cpp_ex_${example} PROPERTIES FOLDER examples/cpp)
 endforeach ()
 
 foreach (example ${tutr_examples})
   add_executable (cpp_ex_${example} ${HDF5_CPP_EXAMPLES_SOURCE_DIR}/${example}.cpp)
-  target_include_directories(cpp_ex_${example} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
-  TARGET_C_PROPERTIES (cpp_ex_${example} STATIC)
-  target_link_libraries (cpp_ex_${example} PRIVATE ${HDF5_CPP_LIB_TARGET} ${HDF5_LIB_TARGET})
+  target_include_directories (cpp_ex_${example} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  if (NOT BUILD_SHARED_LIBS)
+    TARGET_C_PROPERTIES (cpp_ex_${example} STATIC)
+    target_link_libraries (cpp_ex_${example} PRIVATE ${HDF5_CPP_LIB_TARGET} ${HDF5_LIB_TARGET})
+  else ()
+    TARGET_C_PROPERTIES (cpp_ex_${example} SHARED)
+    target_link_libraries (cpp_ex_${example} PRIVATE ${HDF5_CPP_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
+  endif ()
   set_target_properties (cpp_ex_${example} PROPERTIES FOLDER examples/cpp)
 endforeach ()
 
diff --git a/c++/examples/CMakeTests.cmake b/c++/examples/CMakeTests.cmake
index bd1f95b..58bdb68 100644
--- a/c++/examples/CMakeTests.cmake
+++ b/c++/examples/CMakeTests.cmake
@@ -26,7 +26,7 @@
           SDSextendible.h5
           Select.h5
   )
-  if (NOT "${last_test}" STREQUAL "")
+  if (last_test)
     set_tests_properties (CPP_ex-clear-objects PROPERTIES DEPENDS ${last_test})
   endif ()
   set (last_test "CPP_ex-clear-objects")
@@ -46,7 +46,7 @@
           -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
       )
     endif ()
-    if (NOT "${last_test}" STREQUAL "")
+    if (last_test)
       set_tests_properties (CPP_ex_${example} PROPERTIES DEPENDS ${last_test})
     endif ()
     set (last_test "CPP_ex_${example}")
@@ -66,7 +66,7 @@
           h5tutr_groups.h5
           h5tutr_subset.h5
   )
-  if (NOT "${last_test}" STREQUAL "")
+  if (last_test)
     set_tests_properties (CPP_ex_tutr-clear-objects PROPERTIES DEPENDS ${last_test})
   endif ()
   set (last_test "CPP_ex_tutr-clear-objects")
@@ -86,7 +86,7 @@
           -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
       )
     endif ()
-    if (NOT "${last_test}" STREQUAL "")
+    if (last_test)
       set_tests_properties (CPP_ex_${example} PROPERTIES DEPENDS ${last_test})
     endif ()
     set (last_test "CPP_ex_${example}")
diff --git a/c++/src/C2Cppfunction_map.htm b/c++/src/C2Cppfunction_map.htm
index b53ea15..2d779a3 100644
--- a/c++/src/C2Cppfunction_map.htm
+++ b/c++/src/C2Cppfunction_map.htm
@@ -7666,6 +7666,42 @@ normal'><span style='font-size:14.0pt;mso-bidi-font-size:11.0pt;line-height:
   normal'><o:p>&nbsp;</o:p></p>
   </td>
  </tr>
+ <tr style='mso-yfti-irow:180'>
+  <td width=263 style='width:197.2pt;border:solid windowtext 1.0pt;border-top:
+  none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
+  padding:0in 5.4pt 0in 5.4pt'>
+  <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
+  normal'>H5Fget_fileno</p>
+  </td>
+  <td width=474 valign=top style='width:355.2pt;border-top:none;border-left:
+  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
+  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
+  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
+  <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
+  normal'>unsigned long H5File::getFileNum()</p>
+  </td>
+  <td width=35 valign=top style='width:26.05pt;border-top:none;border-left:
+  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
+  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
+  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
+  <p class=MsoNormal align=center style='margin-bottom:0in;margin-bottom:.0001pt;
+  text-align:center;line-height:normal'><o:p>&nbsp;</o:p></p>
+  </td>
+  <td width=42 valign=top style='width:31.45pt;border-top:none;border-left:
+  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
+  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
+  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
+  <p class=MsoNormal align=center style='margin-bottom:0in;margin-bottom:.0001pt;
+  text-align:center;line-height:normal'><o:p>&nbsp;</o:p></p>
+  </td>
+  <td width=169 valign=top style='width:126.65pt;border-top:none;border-left:
+  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
+  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
+  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
+  <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
+  normal'><o:p>&nbsp;</o:p></p>
+  </td>
+ </tr>
  <tr style='mso-yfti-irow:181'>
   <td width=263 style='width:197.2pt;border:solid windowtext 1.0pt;border-top:
   none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
diff --git a/c++/src/CMakeLists.txt b/c++/src/CMakeLists.txt
index 945b352..8e7f8be 100644
--- a/c++/src/CMakeLists.txt
+++ b/c++/src/CMakeLists.txt
@@ -84,24 +84,26 @@ set (CPP_HDRS
     ${HDF5_CPP_SRC_SOURCE_DIR}/H5VarLenType.h
 )
 
-add_library (${HDF5_CPP_LIB_TARGET} STATIC ${CPP_SOURCES} ${CPP_HDRS})
-target_include_directories(${HDF5_CPP_LIB_TARGET}
-    PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
-    INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
-)
-target_compile_definitions(${HDF5_CPP_LIB_TARGET}
-    PRIVATE $<$<BOOL:${HDF5_ENABLE_PARALLEL}>:MPICH_SKIP_MPICXX;MPICH_IGNORE_CXX_SEEK># Parallel/MPI, prevent spurious cpp/cxx warnings
-)
-TARGET_C_PROPERTIES (${HDF5_CPP_LIB_TARGET} STATIC)
-target_link_libraries (${HDF5_CPP_LIB_TARGET} PUBLIC ${HDF5_LIB_TARGET})
-set_global_variable (HDF5_LIBRARIES_TO_EXPORT "${HDF5_LIBRARIES_TO_EXPORT};${HDF5_CPP_LIB_TARGET}")
-H5_SET_LIB_OPTIONS (${HDF5_CPP_LIB_TARGET} ${HDF5_CPP_LIB_NAME} STATIC 0)
-set_target_properties (${HDF5_CPP_LIB_TARGET} PROPERTIES FOLDER libraries/cpp)
-set (install_targets ${HDF5_CPP_LIB_TARGET})
+if (NOT ONLY_SHARED_LIBS)
+  add_library (${HDF5_CPP_LIB_TARGET} STATIC ${CPP_SOURCES} ${CPP_HDRS})
+  target_include_directories (${HDF5_CPP_LIB_TARGET}
+      PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
+  )
+  target_compile_definitions(${HDF5_CPP_LIB_TARGET}
+      PRIVATE $<$<BOOL:${HDF5_ENABLE_PARALLEL}>:MPICH_SKIP_MPICXX;MPICH_IGNORE_CXX_SEEK># Parallel/MPI, prevent spurious cpp/cxx warnings
+  )
+  TARGET_C_PROPERTIES (${HDF5_CPP_LIB_TARGET} STATIC)
+  target_link_libraries (${HDF5_CPP_LIB_TARGET} PUBLIC ${HDF5_LIB_TARGET})
+  set_global_variable (HDF5_LIBRARIES_TO_EXPORT "${HDF5_LIBRARIES_TO_EXPORT};${HDF5_CPP_LIB_TARGET}")
+  H5_SET_LIB_OPTIONS (${HDF5_CPP_LIB_TARGET} ${HDF5_CPP_LIB_NAME} STATIC 0)
+  set_target_properties (${HDF5_CPP_LIB_TARGET} PROPERTIES FOLDER libraries/cpp)
+  set (install_targets ${HDF5_CPP_LIB_TARGET})
+endif ()
 
 if (BUILD_SHARED_LIBS)
   add_library (${HDF5_CPP_LIBSH_TARGET} SHARED ${CPP_SOURCES} ${CPP_HDRS})
-  target_include_directories(${HDF5_CPP_LIBSH_TARGET}
+  target_include_directories (${HDF5_CPP_LIBSH_TARGET}
       PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
@@ -136,7 +138,9 @@ if (HDF5_EXPORTED_TARGETS)
   if (BUILD_SHARED_LIBS)
     INSTALL_TARGET_PDB (${HDF5_CPP_LIBSH_TARGET} ${HDF5_INSTALL_BIN_DIR} cpplibraries)
   endif ()
-  INSTALL_TARGET_PDB (${HDF5_CPP_LIB_TARGET} ${HDF5_INSTALL_BIN_DIR} cpplibraries)
+  if (NOT ONLY_SHARED_LIBS)
+    INSTALL_TARGET_PDB (${HDF5_CPP_LIB_TARGET} ${HDF5_INSTALL_BIN_DIR} cpplibraries)
+  endif ()
 
   install (
       TARGETS
@@ -163,7 +167,9 @@ set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
 
 set (_PKG_CONFIG_LIBS_PRIVATE)
 
-set (_PKG_CONFIG_LIBS "${_PKG_CONFIG_LIBS} -l${HDF5_CPP_LIB_CORENAME}")
+if (NOT ONLY_SHARED_LIBS)
+  set (_PKG_CONFIG_LIBS "${_PKG_CONFIG_LIBS} -l${HDF5_CPP_LIB_CORENAME}")
+endif ()
 if (BUILD_SHARED_LIBS)
   set (_PKG_CONFIG_SH_LIBS "${_PKG_CONFIG_SH_LIBS} -l${HDF5_CPP_LIB_CORENAME}")
 endif ()
diff --git a/c++/src/H5File.cpp b/c++/src/H5File.cpp
index 719c1ba..b9ecded 100644
--- a/c++/src/H5File.cpp
+++ b/c++/src/H5File.cpp
@@ -580,6 +580,27 @@ hsize_t H5File::getFileSize() const
 }
 
 //--------------------------------------------------------------------------
+// Function:    H5File::getFileNum
+///\brief       Returns the file number of the HDF5 file.
+///\return      File number
+///\exception   H5::FileIException
+///\par Description
+///             This function is called after an existing file is opened in
+///             order to retrieve the unique 'file number' for the file.
+// Programmer   Quincey Koziol - April 13, 2019
+//--------------------------------------------------------------------------
+unsigned long H5File::getFileNum() const
+{
+    unsigned long fileno = 0;
+    herr_t ret_value = H5Fget_fileno(id, &fileno);
+    if (ret_value < 0)
+    {
+        throw FileIException("H5File::getFileNum", "H5Fget_fileno failed");
+    }
+    return (fileno);
+}
+
+//--------------------------------------------------------------------------
 // Function:    H5File::getId
 ///\brief       Get the id of this file
 ///\return      File identifier
diff --git a/c++/src/H5File.h b/c++/src/H5File.h
index 332685e..1b1227f 100644
--- a/c++/src/H5File.h
+++ b/c++/src/H5File.h
@@ -69,6 +69,9 @@ class H5_DLLCPP H5File : public Group {
         // Returns the file size of the HDF5 file.
         hsize_t getFileSize() const;
 
+        // Returns the 'file number' of the HDF5 file.
+        unsigned long getFileNum() const;
+
         // Determines if a file, specified by its name, is in HDF5 format
         static bool isHdf5(const char* name);
         static bool isHdf5(const H5std_string& name);
diff --git a/c++/src/H5LaccProp.h b/c++/src/H5LaccProp.h
index 70890b3..ec5e54f 100644
--- a/c++/src/H5LaccProp.h
+++ b/c++/src/H5LaccProp.h
@@ -12,9 +12,6 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-// Class LinkAccPropList represents the HDF5 file access property list and
-// inherits from DataType.
-
 #ifndef __H5LinkAccPropList_H
 #define __H5LinkAccPropList_H
 
@@ -22,15 +19,15 @@ namespace H5 {
 
 /*! \class LinkAccPropList
     \brief Class LinkAccPropList inherits from PropList and provides
-    wrappers for the HDF5 file access property list.
+    wrappers for the HDF5 link access property list.
 */
 // Inheritance: PropList -> IdComponent
 class H5_DLLCPP LinkAccPropList : public PropList {
    public:
-        ///\brief Default file access property list.
+        ///\brief Default link access property list.
         static const LinkAccPropList& DEFAULT;
 
-        // Creates a file access property list.
+        // Creates a link access property list.
         LinkAccPropList();
 
         ///\brief Returns this class name.
@@ -39,7 +36,7 @@ class H5_DLLCPP LinkAccPropList : public PropList {
         // Copy constructor: same as the original LinkAccPropList.
         LinkAccPropList(const LinkAccPropList& original);
 
-        // Creates a copy of an existing file access property list
+        // Creates a copy of an existing link access property list
         // using the property list id.
         LinkAccPropList (const hid_t plist_id);
 
diff --git a/c++/src/H5LcreatProp.cpp b/c++/src/H5LcreatProp.cpp
index 695c1fe..bde9339 100644
--- a/c++/src/H5LcreatProp.cpp
+++ b/c++/src/H5LcreatProp.cpp
@@ -103,6 +103,46 @@ LinkCreatPropList::LinkCreatPropList(const LinkCreatPropList& original) : PropLi
 LinkCreatPropList::LinkCreatPropList(const hid_t plist_id) : PropList(plist_id) {}
 
 //--------------------------------------------------------------------------
+// Function:    LinkCreatPropList::setCreateIntermediateGroup
+///\brief       Specifies in property list whether to create missing
+///             intermediate groups.
+///\param       crt_intmd_group - IN: Flag specifying whether to create
+///                               intermediate groups upon the creation of an object
+///\exception   H5::PropListIException
+// April, 2019
+//--------------------------------------------------------------------------
+void LinkCreatPropList::setCreateIntermediateGroup(bool crt_intmd_group) const
+{
+    herr_t ret_value = H5Pset_create_intermediate_group(id, (unsigned)crt_intmd_group);
+    // Throw exception if H5Pset_create_intermediate_group returns failure
+    if (ret_value < 0)
+    {
+        throw PropListIException("setCreateIntermediateGroup", "H5Pset_create_intermediate_group failed");
+    }
+}
+
+//--------------------------------------------------------------------------
+// Function:    LinkCreatPropList::getCreateIntermediateGroup
+///\brief       Determines whether property is set to enable creating missing
+///             intermediate groups.
+///\return      true if creating intermediate groups is enabled, and false, otherwise
+///\exception   H5::PropListIException
+// April, 2019
+//--------------------------------------------------------------------------
+bool LinkCreatPropList::getCreateIntermediateGroup() const
+{
+    unsigned crt_intmd_group;
+    herr_t ret_value = H5Pget_create_intermediate_group(id, &crt_intmd_group);
+    // Throw exception if H5Pget_create_intermediate_group returns failure
+    if (ret_value < 0)
+    {
+        throw PropListIException("getCreateIntermediateGroup", "H5Pget_create_intermediate_group failed");
+    }
+
+    return((bool)crt_intmd_group);
+}
+
+//--------------------------------------------------------------------------
 // Function:    LinkCreatPropList::setCharEncoding
 ///\brief       Sets the character encoding of the string.
 ///
diff --git a/c++/src/H5LcreatProp.h b/c++/src/H5LcreatProp.h
index 12cb479..908ef63 100644
--- a/c++/src/H5LcreatProp.h
+++ b/c++/src/H5LcreatProp.h
@@ -12,9 +12,6 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-// Class LinkCreatPropList represents the HDF5 file access property list and
-// inherits from DataType.
-
 #ifndef __H5LinkCreatPropList_H
 #define __H5LinkCreatPropList_H
 
@@ -22,15 +19,15 @@ namespace H5 {
 
 /*! \class LinkCreatPropList
     \brief Class LinkCreatPropList inherits from PropList and provides
-    wrappers for the HDF5 file access property list.
+    wrappers for the HDF5 link creation property list.
 */
 // Inheritance: PropList -> IdComponent
 class H5_DLLCPP LinkCreatPropList : public PropList {
    public:
-        ///\brief Default file access property list.
+        ///\brief Default link creation property list.
         static const LinkCreatPropList& DEFAULT;
 
-        // Creates a file access property list.
+        // Creates a link creation property list.
         LinkCreatPropList();
 
         ///\brief Returns this class name.
@@ -39,10 +36,18 @@ class H5_DLLCPP LinkCreatPropList : public PropList {
         // Copy constructor: same as the original LinkCreatPropList.
         LinkCreatPropList(const LinkCreatPropList& original);
 
-        // Creates a copy of an existing file access property list
+        // Creates a copy of an existing link creation property list
         // using the property list id.
         LinkCreatPropList (const hid_t plist_id);
 
+        // Specifies in property list whether to create missing
+        // intermediate groups
+        void setCreateIntermediateGroup(bool crt_intmd_group) const;
+
+        // Determines whether property is set to enable creating missing
+        // intermediate groups
+        bool getCreateIntermediateGroup() const;
+
         // Sets the character encoding of the string.
         void setCharEncoding(H5T_cset_t encoding) const;
 
diff --git a/c++/src/H5Location.cpp b/c++/src/H5Location.cpp
index 2c49016..2641960 100644
--- a/c++/src/H5Location.cpp
+++ b/c++/src/H5Location.cpp
@@ -1066,7 +1066,7 @@ void H5Location::link(const char *curr_name, const Group& new_loc,
     hid_t lcpl_id = lcpl.getId();
     hid_t lapl_id = lapl.getId();
 
-    ret_value = H5Lcreate_hard(getId(), curr_name, new_loc.getId(), new_name, H5P_DEFAULT, H5P_DEFAULT);
+    ret_value = H5Lcreate_hard(getId(), curr_name, new_loc_id, new_name, lcpl_id, lapl_id);
    if (ret_value < 0)
         throwException("link", "creating link failed");
 }
@@ -1102,14 +1102,13 @@ void H5Location::link(const H5std_string& curr_name, const Group& new_loc,
 ///             H5Lcreate_hard APIs in the HDF5 C Reference Manual.
 //  March 2018
 //--------------------------------------------------------------------------
-void H5Location::link(const char *curr_name, const hid_t same_loc,
-             const char *new_name, const LinkCreatPropList& lcpl, const LinkAccPropList& lapl) const
+void H5Location::link(const char *curr_name, const hid_t same_loc, const char *new_name, const LinkCreatPropList& lcpl, const LinkAccPropList& lapl) const
 {
     herr_t ret_value = -1;
     hid_t lcpl_id = lcpl.getId();
     hid_t lapl_id = lapl.getId();
 
-    ret_value = H5Lcreate_hard(getId(), curr_name, same_loc, new_name, H5P_DEFAULT, H5P_DEFAULT);
+    ret_value = H5Lcreate_hard(getId(), curr_name, same_loc, new_name, lcpl_id, lapl_id);
 
    if (ret_value < 0)
         throwException("link", "creating link failed");
diff --git a/c++/src/H5Object.cpp b/c++/src/H5Object.cpp
index 1c22efe..8d3334b 100644
--- a/c++/src/H5Object.cpp
+++ b/c++/src/H5Object.cpp
@@ -40,9 +40,8 @@
 namespace H5 {
 
 #ifndef DOXYGEN_SHOULD_SKIP_THIS
-// userAttrOpWrpr simply interfaces between the user's function and the
-// C library function H5Aiterate2; used to resolve the different prototype
-// problem.  May be moved to Iterator later.
+// userAttrOpWrpr interfaces between the user's function and the
+// C library function H5Aiterate2
 extern "C" herr_t userAttrOpWrpr(hid_t loc_id, const char *attr_name,
     const H5A_info_t *ainfo, void *op_data)
 {
@@ -52,6 +51,17 @@ extern "C" herr_t userAttrOpWrpr(hid_t loc_id, const char *attr_name,
     return 0;
 }
 
+// userVisitOpWrpr interfaces between the user's function and the
+// C library function H5Ovisit2
+extern "C" herr_t userVisitOpWrpr(hid_t obj_id, const char *attr_name,
+    const H5O_info_t *obj_info, void *op_data)
+{
+    H5std_string s_attr_name = H5std_string(attr_name);
+    UserData4Visit* myData = reinterpret_cast<UserData4Visit *> (op_data);
+    int status = myData->op(*myData->obj, s_attr_name, obj_info, myData->opData);
+    return status;
+}
+
 //--------------------------------------------------------------------------
 // Function:    H5Object default constructor (protected)
 // Programmer   Binh-Minh Ribler - 2000
@@ -197,8 +207,6 @@ Attribute H5Object::openAttribute(const unsigned int idx) const
 ///\par Description
 ///             The signature of user_op is
 ///             void (*)(H5::H5Location&, H5std_string, void*).
-///             For information, please refer to the H5Aiterate2 API in
-///             the HDF5 C Reference Manual.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
 int H5Object::iterateAttrs(attr_operator_t user_op, unsigned *_idx, void *op_data)
@@ -228,6 +236,61 @@ int H5Object::iterateAttrs(attr_operator_t user_op, unsigned *_idx, void *op_dat
 }
 
 //--------------------------------------------------------------------------
+// Function:    H5Object::visit
+///\brief       Recursively visits all HDF5 objects accessible from this object.
+///\param       idx_type - IN: Type of index; valid values include:
+///             \li \c H5_INDEX_NAME
+///             \li \c H5_INDEX_CRT_ORDER
+///\param       order - IN: Order in which index is traversed; valid values include:
+///             \li \c H5_ITER_DEC
+///             \li \c H5_ITER_INC
+///             \li \c H5_ITER_NATIVE
+///\param       user_op  - IN: Callback function passing data regarding the
+///                            object to the calling application
+///\param       *op_data - IN: User-defined pointer to data required by the
+///                            application for its processing of the object
+///\param       fields   - IN: Flags specifying the fields to be retrieved
+///                            to the callback op via the H5O_info_t argument.
+///             \li \c H5O_INFO_BASIC      fileno, addr, type, and rc fields
+///             \li \c H5O_INFO_TIME       atime, mtime, ctime, and btime fields
+///             \li \c H5O_INFO_NUM_ATTRS  num_attrs field
+///             \li \c H5O_INFO_HDR        hdr field
+///             \li \c H5O_INFO_META_SIZE  meta_size field
+///             \li \c H5O_INFO_ALL        H5O_INFO_BASIC | H5O_INFO_TIME | H5O_INFO_NUM_ATTRS | H5O_INFO_HDR | H5O_INFO_META_SIZE
+///\return
+///             \li On success:
+///                 \li the return value of the first operator that returns a positive value
+///                 \li zero if all members were processed with no operator returning non-zero
+///             \li On failure:
+///                 \li an exception Exception will be thrown if something went
+///                     wrong within the library or the operator failed
+///\exception   H5::Exception
+///\par Description
+///             For information, please refer to the H5Ovisit2 API in the HDF5
+///             C Reference Manual.
+// Programmer   Binh-Minh Ribler - Feb, 2019
+//--------------------------------------------------------------------------
+void H5Object::visit(H5_index_t idx_type, H5_iter_order_t order, visit_operator_t user_op, void *op_data, unsigned int fields)
+{
+    // Store the user's function and data
+    UserData4Visit* userData = new UserData4Visit;
+    userData->opData = op_data;
+    userData->op = user_op;
+    userData->obj = this;
+
+    // Call the C API passing in op wrapper and info
+    herr_t ret_value = H5Ovisit2(getId(), idx_type, order, userVisitOpWrpr, static_cast<void *>(userData), fields);
+
+    // Release memory
+    delete userData;
+
+    // Throw exception if H5Ovisit2 failed, which could be a failure in
+    // the library or in the call back operator
+    if (ret_value < 0)
+        throw Exception(inMemFunc("visit"), "H5Ovisit2 failed");
+}
+
+//--------------------------------------------------------------------------
 // Function:    H5Object::objVersion
 ///\brief       Returns the header version of this HDF5 object.
 ///\return      Object version, which can have the following values:
diff --git a/c++/src/H5Object.h b/c++/src/H5Object.h
index 10b3865..4a4e909 100644
--- a/c++/src/H5Object.h
+++ b/c++/src/H5Object.h
@@ -40,16 +40,30 @@ namespace H5 {
 // Inheritance: H5Location -> IdComponent
 
 // Define the operator function pointer for H5Aiterate().
-typedef void (*attr_operator_t)(H5Object& loc/*in*/,
-                                 const H5std_string attr_name/*in*/,
-                                 void *operator_data/*in,out*/);
+typedef void (*attr_operator_t)(H5Object& loc,
+                                 const H5std_string attr_name,
+                                 void *operator_data);
+
+// Define the operator function pointer for H5Ovisit2().
+typedef int (*visit_operator_t)(H5Object& obj,
+                                 const H5std_string attr_name,
+                                 const H5O_info_t *oinfo,
+                                 void *operator_data);
 
 // User data for attribute iteration
 class UserData4Aiterate {
     public:
         attr_operator_t op;
         void* opData;
-        H5Object* location;
+        H5Object* location; // Consider changing to H5Location
+};
+
+// User data for visit iteration
+class UserData4Visit {
+    public:
+        visit_operator_t op;
+        void* opData;
+        H5Object* obj;
 };
 
 class H5_DLLCPP H5Object : public H5Location {
@@ -71,6 +85,9 @@ class H5_DLLCPP H5Object : public H5Location {
         // Iterate user's function over the attributes of this object.
         int iterateAttrs(attr_operator_t user_op, unsigned* idx = NULL, void* op_data = NULL);
 
+        // Recursively visit elements reachable from this object.
+        void visit(H5_index_t idx_type, H5_iter_order_t order, visit_operator_t user_op, void *op_data, unsigned int fields);
+
         // Returns the object header version of an object
         unsigned objVersion() const;
 
@@ -98,6 +115,7 @@ class H5_DLLCPP H5Object : public H5Location {
         ssize_t getObjName(H5std_string& obj_name, size_t len = 0) const;
         H5std_string getObjName() const;
 
+
 #ifndef DOXYGEN_SHOULD_SKIP_THIS
 
    protected:
diff --git a/c++/src/cpp_doc_config b/c++/src/cpp_doc_config
index 697fb77..14ca90c 100644
--- a/c++/src/cpp_doc_config
+++ b/c++/src/cpp_doc_config
@@ -38,7 +38,7 @@ PROJECT_NAME           =
 # could be handy for archiving the generated documentation or if some version
 # control system is used.
 
-PROJECT_NUMBER         = "1.11.4"
+PROJECT_NUMBER         = "1.11.6"
 
 # Using the PROJECT_BRIEF tag one can provide an optional one line description
 # for a project that appears at the top of each page and should give viewer a
diff --git a/c++/test/CMakeLists.txt b/c++/test/CMakeLists.txt
index 8e2d685..95ca9b1 100644
--- a/c++/test/CMakeLists.txt
+++ b/c++/test/CMakeLists.txt
@@ -38,16 +38,17 @@ set (srcdir ${CMAKE_CURRENT_SOURCE_DIR})
 configure_file (${HDF5_CPP_TEST_SOURCE_DIR}/H5srcdir_str.h.in H5srcdir_str.h  @ONLY)
 
 add_executable (cpp_testhdf5 ${CPP_TEST_SOURCES} )
-target_include_directories(cpp_testhdf5 PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (cpp_testhdf5 PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 target_compile_definitions(cpp_testhdf5
     PRIVATE $<$<BOOL:${HDF5_ENABLE_PARALLEL}>:MPICH_SKIP_MPICXX;MPICH_IGNORE_CXX_SEEK># Parallel/MPI, prevent spurious cpp/cxx warnings
 )
-TARGET_C_PROPERTIES (cpp_testhdf5 STATIC)
-target_link_libraries (cpp_testhdf5 PRIVATE
-    ${HDF5_CPP_LIB_TARGET}
-    ${HDF5_LIB_TARGET}
-    ${HDF5_TEST_LIB_TARGET}
-)
+if (NOT BUILD_SHARED_LIBS)
+  TARGET_C_PROPERTIES (cpp_testhdf5 STATIC)
+  target_link_libraries (cpp_testhdf5 PRIVATE ${HDF5_CPP_LIB_TARGET} ${HDF5_LIB_TARGET} ${HDF5_TEST_LIB_TARGET})
+else ()
+  TARGET_C_PROPERTIES (cpp_testhdf5 SHARED)
+  target_link_libraries (cpp_testhdf5 PRIVATE ${HDF5_CPP_LIBSH_TARGET} ${HDF5_LIBSH_TARGET} ${HDF5_TEST_LIBSH_TARGET})
+endif ()
 set_target_properties (cpp_testhdf5 PROPERTIES FOLDER test/cpp)
 
 include (CMakeTests.cmake)
diff --git a/c++/test/tarray.cpp b/c++/test/tarray.cpp
index 6bd4ca6..fccc556 100644
--- a/c++/test/tarray.cpp
+++ b/c++/test/tarray.cpp
@@ -286,7 +286,7 @@ H5::DataType getArr()
     *dims = 5; 
     H5::ArrayType ret; 
     ret = H5::ArrayType(H5::PredType::NATIVE_INT, 1, dims); 
-    delete[] dims; 
+    delete dims; 
     return ret;
 }
 
@@ -371,7 +371,6 @@ static void test_array_info()
     s1_t rdata[SPACE1_DIM1][ARRAY1_DIM1];   // Information read in
     hsize_t sdims1[] = {SPACE1_DIM1};
     hsize_t tdims1[] = {ARRAY1_DIM1};
-    int     nmemb;      // Number of compound members
     int     ii;         // counting variables
     hsize_t idxi, idxj, idxk; // dimension indicing variables
     H5T_class_t mclass; // Datatype class for field
diff --git a/c++/test/tfile.cpp b/c++/test/tfile.cpp
author	Victor Stinner <vstinner@python.org>	2021-03-18 01:46:06 (GMT)
committer	GitHub <noreply@github.com>	2021-03-18 01:46:06 (GMT)
commit	e0bf70d08c4a4a68782702e747e6bf7670667591 (patch)
tree	36994e29ed642e690b7932129ee150c484fd20d9 /Python/_warnings.c
parent	08fb8ac99ab03d767aa0f1cfab3573eddf9df018 (diff)
download	cpython-e0bf70d08c4a4a68782702e747e6bf7670667591.zip cpython-e0bf70d08c4a4a68782702e747e6bf7670667591.tar.gz cpython-e0bf70d08c4a4a68782702e747e6bf7670667591.tar.bz2