1.8/master (#317)hdf5-1_8_22

* Revert incorrect bool type

* Correct grep text for filter test

* Check sizeof type to use correct ref_type

* h5dump reg ref chnages has no error file

* Fix comment

* Remove unneeded files

* Verify the decoded version for "all" and "none" selection.

* Remove double entry

* Add missing include

* Snapshot version 1.8 release 22 (snap4)
Update version to 1.8-snap5

* Fixes for test failures with --disable-tests --disable-tools options.
Don't test ph5diff if tests are disabled.

* Correct conditions for parallel builds with and without tests.

* Snapshot version 1.8 release 22 (snap5)
Update version to 1.8.22-snap6

* TRILAB-192 merging warnings changes from develop

* Autotools reconfigure update

* Restore page ejects.

* Restore page eject chars

* Fix orphaned token

* Update LT files

* Correct extra flags and merge TRILAB-24

* Update release note for CMake warnings

* H5repack bug fixes from develop

* TRILAB-192 - merge changes from develop

Single source, config files, for warnings for both autotools and CMake.
Update CMake libraries, tools, tests to use correct flags.

* Add missing m4 file

* Remove 128bit config check fo 1.8

* TRILAB-192 update LTparse files

* A fix in the cleaning up code for datatype when datatype initialization via H5D__init_type() fails.
The code to fix the problem is the same as what is done in H5D__open_oid().

* Add missing " and update function calls incorrectly
named load_gcc_arguments.
Commit changes to gnu-cxxflags to remove unmatched " and to gnu-fflags
to not add C warnings flags to H5_FCFLAGS.

* TRILAB-192 - cleanup edits and match CMake CXX to autotools

* Fix shadowed type

* TRILAB-192 correct fortran commands

* TRILAB-192 version of std=f2008 special check

* Fix shadow variable

* Add prefix_relto_examplesdir function to set relative path to h5c++.

* TRILAB-192 - parser files cannot handle this warning

* Parallel Fortran tests now use the MPI module instead of including
mpif.h.

* Don't add general warnings flags for unsupported old versions of gcc and
g++ (older than gcc/g++ 4.2).
Correct gnu-cxxflags to determine warnings flags to be added based on
C++ compiler version instead of C compiler version.

* Snapshot version 1.8 release 22 (snap6)
Update version to 1.8.22-snap7

* TRILAB-244 separate CXX warnings and errors from C

* Fix NoFilter build

* Move ADD_H5_FLAGS macro from *CompilerFlags.cmake files to
config/cmake_ext_mod/HDFMacros.cmake for common use.

* Restrict errors to gcc 4.8 and above.

* OESS-65 replace szip with aec szip

* Correct CMake version

* Correct -Werror=unused-variable

* Add -Werror= flags to lists displayed in libhdf5.settings.

* Fix -Werror=unused-variable

* More fixes for unused variable

* Resolve warning errors from -Werror= flags:
  -Werror=bad-function-cast
  -Werror=bad-function-cast
  -Werror=implicit-function-declaration
  -Werror=nested-externs

* Remove verbose assignments in smoke_check 3 and 5 functions.

* Update to use optimization flags, C++ error flags, and correct
libhdf5.settings.in to remove unworkable changes.

* Update config/gnu-cxxflags.

* Add missing headers

* Fix ifort warning flag.
Restore AC_DEFUN([PAC_PROG_FC_DEFAULT_REALisDBLE] in m4/aclocal_fc.m4.
Add --enable-symbols, --enable-profiling, and --enable-optimization
options to autotools configure;  all configure flags for
--enable-production and --disable-production should match HDF5 1.10 and
1.12 production and debug default flags.

* Add github actions file

* Correct path

* OESS-65 Fix packaging

* Update reference name

* Correct filename

* disable pr action and enable fail fast

* Snapshot 1.8.22-snap7
Update version to 1.8.22-snap8.

* Correct mingw path

* Correct mingw paths

* Revise gnu-*flags and cmake/HDF*CompilerFlags.cmake files to add warning
flags for GCC compilers version 4.8 and above.
Removed files from gnu-warnings that only apply to versions < 4.8.
Consolidated warnings from versions < 4.8 that apply to versions >= 4.8
into the 4.8 warnings files.

* Update MANIFEST for removal of older warnings files.

* Yanked all MPI-1 calls
Added batch scripts in bin/batch.

* Snapshot 1.8.22-snap8.
Update version to 1.8.22-snap9.

* Squashed commit of the following:

commit 45b0cbc71929930a874e1c09e0770aa64d0ae697
Author: Larry Knox <lrknox@hdfgroup.org>
Date:   Thu Apr 23 13:14:56 2020 -0500

    Add C++ warnings treated as error for autotools builds.

commit 6debcddcc766601799d5bd661bd60946f951a07e
Author: Larry Knox <lrknox@hdfgroup.org>
Date:   Fri Jun 19 16:50:03 2020 -0500

    Remove tests for develop branch from testh5cc.sh.in.
    Add @H5_ECXXFLAGS@ to AM_CXXFLAGS.

commit fed497e7f207313b2a133d3b68c942b7d7104b90
Author: Larry Knox <lrknox@hdfgroup.org>
Date:   Fri Jun 12 15:06:39 2020 -0500

    Merge pull request #2646 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop

    * commit '998c6470d78e14228695419c3b514c35ecf3d69e':
      Remove unnecessary version conditions for Clang compilers.

commit 92e52ce5c211bd1d3991a3b8bb67287ac7b652aa
Author: Larry Knox <lrknox@hdfgroup.org>
Date:   Wed Jun 10 18:53:45 2020 -0500

    Merge pull request #2639 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop

    * commit 'a33667faf226f5d8c9633bf537893e8fce1bf1f6':
      Add c++ to --enable-sanitize-checks option.

commit 2e802534fb997b81fa98fdd1c7d97d4310898e0d
Author: Larry Knox <lrknox@hdfgroup.org>
Date:   Wed Jun 10 15:18:36 2020 -0500

    Merge pull request #2633 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop

    * commit '20eab963899841c9a003baebead8e3bc07d9e127':
      Remove duplicate entries in MANIFEST.
      Make changes to CMake CompilerFlags.cmake files so extra flags are loaded for non-GNU compilers.
      Update new clang files to not pick up clang as vendor for pgCC. Add new files to MANIFEST Temporary demotion of 2 -Werror warning flags that fail on macos 10.12 Remove Production flag unknown to Apple clang.

commit 96ef60a58a23847a7da89a891f2415055ec2ab60
Author: Larry Knox <lrknox@hdfgroup.org>
Date:   Mon Jun 8 16:24:49 2020 -0500

    Merge pull request #2631 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop

    * commit 'b942a4d8a3e27317cac50ce37ff5302d477664d8':
      Clean up code to get clang version in config/linux-gnulibc1

commit 8a7c687da568e8b50b38fa53da1ca63759be6ec4
Author: Larry Knox <lrknox@hdfgroup.org>
Date:   Mon Jun 8 11:42:37 2020 -0500

    Merge pull request #2623 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop

    * commit 'c7626f79fdee4eee13925e240ef41e61f3367eab':
      Add flags from config/clang-warnings/*general files to H5 C and CXX flags for all versions of Clang and Clang++ compilers. Switched from cut to awk in testcheck_version.sh.in to avoid dependence on tab vs. " " in version definitions in H5public.h.
      Add files for adding warning flags for clang compilers in autotools configure.

commit db3ef7ff3c1ed79167cecef831501411cff8291f
Merge: 5a0f8d7 f9f1310
Author: Larry Knox <lrknox@hdfgroup.org>
Date:   Fri Jun 19 14:46:22 2020 -0500

    Merge branch 'hdf5_1_12' of https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into hdf5_1_12

commit 5a0f8d7940ae57b445f545a0abd7e303ce6924ee
Author: Larry Knox <lrknox@hdfgroup.org>
Date:   Wed Jun 10 20:15:41 2020 -0500

    Merge pull request #2636 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:HDFFV-11000-update-testh5cc.sh.in-for-version to develop

    * commit '5c0bd670d6e9919c463fbc05de99e2ba55b0761e':
      Add tests for all version to H5_NO_DEPRECATED_SYMBOLS section and to section for current version, with and without default API version flags.
      HDFFV-11000:  update-testh5cc.sh.in to test sample versioned functions in HDF5 1.10, 1.12 and develop.

* Update configure and Makefile.ins after bin/reconfigure.

* Fix MANIFEST

* Fix HDFFV-10591

Description:
    h52gif produced a segfault when a buffer overflow occurred because
    the data size was corrupted and became very large.  This commit added
    a check on the data size against the buffer size to prevent the segfault.
    It also added error reporting to h52gif to display an error message
    instead of silently exiting when the failure occurred.
Platforms tested:
    Linux/64 (jelly)

* Snapshot 1.8.22-snap9. Update version to 1.8.22-snap10.

* Merge pull request #2686 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop

* commit '800f93f7c994f88dfa716746153ded4b1e690e3a':
  Remove path to szip header file from AM_CPPFLAGS when configure check of libsz fails. Fix for HDFFV-10830.

* Regenerate configure.

* Merge from 1.10-1.12-dev - LT parse needs update

* Incorporate pull request #2693 from develop for the fix to HDFFV-11080:
(1) Patch up the file pointer when reading attribute of variable length datatype
(2) Test to verify the fix when doing multiple threads
(3) Update MANIFEST
(4) Add new test to Cmake

* Switch bison and flex update of LT files from bin/genltanalyse to
bin/genparser, and from automatically updating the LT files whenever
reconfigure is run to running only on man<F12>ual command.

* Update hl/sr/H5LT files.
Add bin/genparser to MANIFEST; remove bin/genltanalyze.

* Fix to the merge of PR #2708 for HDFFV-11080 to the 1.8 branch.
Need to checkin test/Makefile.in for the new file added.

* Fix HDFFV-11120 and HDFFV-11121 (CVE-2018-13870 and CVE-2018-13869)

Description:
    When a buffer overflow occurred because a name length was corrupted
    and became very large, h5dump produced a segfault on one file and a
    memcpy parameter overlap on another file.  This commit added checks
    that detect a read pass the end of the buffer to prevent these error
    conditions.
Platforms tested:
    Linux/64 (jelly)

* Fixed typo

* Check for header szlib.h only when libsz passes AC_CHECK_LIB, so that
H5_HAVE_SALIB_H is not defined when szip is not enabled, to prevent
compile failures for incompatible szlib.

* HDFFV-11127 - force RTLD_LOCAL in dlopen

* spelling

* Remove extra parens

* Remove unnecessary assignment freom configure.ac.

* Add hypen to subrelease regex

* Add special case when H5_VERS_SUBRELEASE is 0

* Revert H5_VERS_SUBRELEASE check

* The version string has a second use for packaging

* MinGW uses "MinGW Makefiles"

* Snapshot 1.8.22-snap10. Update version to 1.8.22-snap11.

* Merge clang-format changes from develop

* remove stray file

* Source formatted

* Add options to github actions.

* Add back file, remove py file

* HDFFV-11096 Correct h5dump usage text

* Update formating

* remove autogen for 1.8 branch

* Fix comment whitespace

* Change '==' to 'eq' in test script

* Merge from develop

github updates
bin scripts
parser updates

* Snapshot 1.8.22-snap11. Update version to 1.8.22-snap12.

* Merge from 1.10

Comments, whitespace
Simple init and if block brackets.
Minimal code changes limited to return value and spelling

* Update autotools files

* Update FD source

* More merges from 1.10 comments and inits

* Comment fixes

* Fix macro argument

* Remove autogen file and cache dir

* Revert autotools files to previous version

* Correct boolean value and missing define

* URL and options corrections

* revert autoconf files

* Fix compile issues with vfd drivers.

* Fix HDFS test

* Remove extra #endif

* Move init above execution

* Multiple changes to bring branch up-to-date (#87)

Correct TARGET variable and CMake config file location.
Add option to allow filter plugins to be built inline.
Update CMake tools macros.

* hdf5 1 8 release text (#113)

* Multiple changes to bring branch up-to-date

Correct TARGET variable and CMake config file location.
Add option to allow filter plugins to be built inline.
Update CMake tools macros.

* release text updates - mostly whitespace

* Fixed HDFFV-10480 and HDFFV-11159 (#145)

* Fixed HDFFV-10480 and HDFFV-11159

Description
    Checked against buffer size to prevent segfault, in case of data corruption.

    + HDFFV-11159 CVE-2018-14033 Buffer over-read in H5O_layout_decode
    + HDFFV-10480 CVE-2018-11206 Buffer over-read in H5O_fill_new[/old]_decode and
        A user's patch was applied to this previously, but it is redone
        for a more correct fix, that is the check now accounted for the
        previous advance of the buffer pointer.

Platforms tested:
    Linux/64 (jelly)

* Fixed typo

* Update HDF5 1.8 copyright headers with updated copyright URL (#148)

* Update URL for COPYING file in copyright headers.

* Make fortran copyright headers uniformly spaced.

* Update url for Copyright file in c++/src/footer.html.

* OESS-98 Update plugin build option (#171)

* 1.8 has extra fortran CMake option (#176)

* 1.8 has extra fortran CMake option

* Update license URL

* OESS-98 fix tools test for plugins (#180)

* Hdf5 1 8 (#169)

* Fixed HDFFV-10480 and HDFFV-11159

Description
    Checked against buffer size to prevent segfault, in case of data corruption.

    + HDFFV-11159 CVE-2018-14033 Buffer over-read in H5O_layout_decode
    + HDFFV-10480 CVE-2018-11206 Buffer over-read in H5O_fill_new[/old]_decode and
        A user's patch was applied to this previously, but it is redone
        for a more correct fix, that is the check now accounted for the
        previous advance of the buffer pointer.

Platforms tested:
    Linux/64 (jelly)

* Fixed typo

* Fixed HDFFV-11150

Description
    Replaced an HDassert with a check for null pointer in H5O_dec_rc() to
    catch null pointer in corrupted data situation.
    Reversed the fix in svn-r24463 in which a check for null pointer prior
    to calling H5O_dec_rc()
Platforms tested:
    Linux/64 (jelly)

* HDF5 1 8 fix fortran build on macs (#186)

* Correct fortran and shared libs option

* Fix for no shared fortran build

* OESS-98 fix hdf5 link target (#191)

* Partial changes to RELEASE.txt for release. (#185)

* Partial changes to RELEASE.txt for release.

* Update supported and tested platforms.

* Update version to 1.8.22-12.

* close #195. (#196)

* Update HDF5PluginMacros.cmake

* Update HDF5PluginMacros.cmake

* Update directory for SZ filter in HDF5PluginMacros.cmake.
Updates for release:
    Switch configure default to production mode.
    Set HDF5_GENERATE_HEADERS to OFF.

* Restores maintainer mode in the autotools (#200)

Maintainer mode should be enabled in development branches.

Also adds helpful commenting.

Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c

* Update configure for Restores maintainer mode in the autotools (#200).

* Update MANIFEST for switch_maint_mode script.

* Restores maintainer mode in the autotools (#200) (#203)

* Restores maintainer mode in the autotools (#200)

Maintainer mode should be enabled in development branches.

Also adds helpful commenting.

Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c

* Update configure for Restores maintainer mode in the autotools (#200).

* Update MANIFEST for switch_maint_mode script.

Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>

* Hdf5 1 8 22 (#212)

* Restores maintainer mode in the autotools (#200)

Maintainer mode should be enabled in development branches.

Also adds helpful commenting.

Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c

* Update configure for Restores maintainer mode in the autotools (#200).

* Update MANIFEST for switch_maint_mode script.

Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>

* Update so numbers for 1.8.22 release.

* Add so numbers changes in Makefile.ins for 1.8.22 release.

* Brings ttsafe_attr_vlen.c changes from develop (#214)

Fixes exposed pthread problem on Windows.

* Update SO numbers for Hdf5 1 8 22 (#215)

* Restores maintainer mode in the autotools (#200)

Maintainer mode should be enabled in development branches.

Also adds helpful commenting.

Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c

* Update configure for Restores maintainer mode in the autotools (#200).

* Update MANIFEST for switch_maint_mode script.

* Update so numbers for 1.8.22 release.

* Add so numbers changes in Makefile.ins for 1.8.22 release.

Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>

* Update pkgconfig settings with version - #218 (#223)

* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".

* Update 1.8 final release notice.

* Hdf5 1 8 22 (#224)

* Restores maintainer mode in the autotools (#200)

Maintainer mode should be enabled in development branches.

Also adds helpful commenting.

Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c

* Update configure for Restores maintainer mode in the autotools (#200).

* Update MANIFEST for switch_maint_mode script.

* Update so numbers for 1.8.22 release.

* Add so numbers changes in Makefile.ins for 1.8.22 release.

* Update pkgconfig settings with version - #218 (#223)

* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".

* Update 1.8 final release notice.

Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>

* Update CMake/HDF5Examples version in bin/release

* Update CMake/HDF5Examples version number in bin/release (#225)

* Restores maintainer mode in the autotools (#200)

Maintainer mode should be enabled in development branches.

Also adds helpful commenting.

Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c

* Update configure for Restores maintainer mode in the autotools (#200).

* Update MANIFEST for switch_maint_mode script.

* Update so numbers for 1.8.22 release.

* Add so numbers changes in Makefile.ins for 1.8.22 release.

* Update pkgconfig settings with version - #218 (#223)

* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".

* Update 1.8 final release notice.

* Update CMake/HDF5Examples version in bin/release

Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>

* Fixed typo in an error message. (#228)

* Fixed typo in an error message. (#227)

* Remove duplicate setting (#239)

* Bring 3 small changes from Hdf5 1.8 to 1.8.22 (#241)

* Restores maintainer mode in the autotools (#200)

Maintainer mode should be enabled in development branches.

Also adds helpful commenting.

Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c

* Update configure for Restores maintainer mode in the autotools (#200).

* Update MANIFEST for switch_maint_mode script.

* Update so numbers for 1.8.22 release.

* Add so numbers changes in Makefile.ins for 1.8.22 release.

* Update pkgconfig settings with version - #218 (#223)

* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".

* Update 1.8 final release notice.

* Update CMake/HDF5Examples version in bin/release

* Fixed typo in an error message. (#227)

* Remove duplicate setting (#239)

Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>

* Stat st blocks fix 1822 (#251)

* Restores maintainer mode in the autotools (#200)

Maintainer mode should be enabled in development branches.

Also adds helpful commenting.

Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c

* Update configure for Restores maintainer mode in the autotools (#200).

* Update MANIFEST for switch_maint_mode script.

* Update so numbers for 1.8.22 release.

* Add so numbers changes in Makefile.ins for 1.8.22 release.

* Update pkgconfig settings with version - #218 (#223)

* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".

* Update 1.8 final release notice.

* Update CMake/HDF5Examples version in bin/release

* Fixed typo in an error message. (#227)

* Remove duplicate setting (#239)

* Fixes Autotools detection of the st_blocks field in stat (#246)

* Fixes Autotools detection of the st_blocks field in stat

The Autotools and CMake will now both correctly determine if the
stat struct has the st_blocks field and set H5_HAVE_STAT_ST_BLOCKS
appropriately.

* Fixes a typo in configure.ac

* Restore lines in RELEASE.txt.

Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>

* Stat st blocks fix 1822 (#256)

* Restores maintainer mode in the autotools (#200)

Maintainer mode should be enabled in development branches.

Also adds helpful commenting.

Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c

* Update configure for Restores maintainer mode in the autotools (#200).

* Update MANIFEST for switch_maint_mode script.

* Update so numbers for 1.8.22 release.

* Add so numbers changes in Makefile.ins for 1.8.22 release.

* Update pkgconfig settings with version - #218 (#223)

* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".

* Update 1.8 final release notice.

* Update CMake/HDF5Examples version in bin/release

* Fixed typo in an error message. (#227)

* Remove duplicate setting (#239)

* Fixes Autotools detection of the st_blocks field in stat (#246)

* Fixes Autotools detection of the st_blocks field in stat

The Autotools and CMake will now both correctly determine if the
stat struct has the st_blocks field and set H5_HAVE_STAT_ST_BLOCKS
appropriately.

* Fixes a typo in configure.ac

* Restore lines in RELEASE.txt.

* Updated configure with reconfigure.

Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>

* RELEASE.txt cleanup.

* Hdf5 1 8 22 (#261)

* Restores maintainer mode in the autotools (#200)

Maintainer mode should be enabled in development branches.

Also adds helpful commenting.

Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c

* Update configure for Restores maintainer mode in the autotools (#200).

* Update MANIFEST for switch_maint_mode script.

* Update so numbers for 1.8.22 release.

* Add so numbers changes in Makefile.ins for 1.8.22 release.

* Update pkgconfig settings with version - #218 (#223)

* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".

* Update 1.8 final release notice.

* Update CMake/HDF5Examples version in bin/release

* Fixed typo in an error message. (#227)

* Remove duplicate setting (#239)

* RELEASE.txt cleanup.

Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>

* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.

* )Update version.

* Hdf5 1 8 22 (#266)

* Restores maintainer mode in the autotools (#200)

Maintainer mode should be enabled in development branches.

Also adds helpful commenting.

Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c

* Update configure for Restores maintainer mode in the autotools (#200).

* Update MANIFEST for switch_maint_mode script.

* Update so numbers for 1.8.22 release.

* Add so numbers changes in Makefile.ins for 1.8.22 release.

* Update pkgconfig settings with version - #218 (#223)

* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".

* Update 1.8 final release notice.

* Update CMake/HDF5Examples version in bin/release

* Fixed typo in an error message. (#227)

* Remove duplicate setting (#239)

* RELEASE.txt cleanup.

* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.

* )Update version.

Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>

* Reverts lock/unlock callback signature to 1.8.21 version (#254)

* Reverts lock/unlock callback signature to 1.8.21 version

This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs
that have the lock callback implemented and that is just as no-op stubs.
These stubs were removed so the callbacks are now NULL pointers, like
the other VFDs in 1.8.

* Trivial whitespace fix

* Update version to 1.8.22-14.

* Hdf5 1 8 22 - Reverts lock/unlock callback signature to 1.8.21 version (#267)

* Restores maintainer mode in the autotools (#200)

Maintainer mode should be enabled in development branches.

Also adds helpful commenting.

Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c

* Update configure for Restores maintainer mode in the autotools (#200).

* Update MANIFEST for switch_maint_mode script.

* Update so numbers for 1.8.22 release.

* Add so numbers changes in Makefile.ins for 1.8.22 release.

* Update pkgconfig settings with version - #218 (#223)

* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".

* Update 1.8 final release notice.

* Update CMake/HDF5Examples version in bin/release

* Fixed typo in an error message. (#227)

* Remove duplicate setting (#239)

* RELEASE.txt cleanup.

* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.

* )Update version.

* Reverts lock/unlock callback signature to 1.8.21 version (#254)

* Reverts lock/unlock callback signature to 1.8.21 version

This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs
that have the lock callback implemented and that is just as no-op stubs.
These stubs were removed so the callbacks are now NULL pointers, like
the other VFDs in 1.8.

* Trivial whitespace fix

* Update version to 1.8.22-14.

Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>

* Update version in H5public.h

* Hdf5 1 8 22 (#269)

* Restores maintainer mode in the autotools (#200)

Maintainer mode should be enabled in development branches.

Also adds helpful commenting.

Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c

* Update configure for Restores maintainer mode in the autotools (#200).

* Update MANIFEST for switch_maint_mode script.

* Update so numbers for 1.8.22 release.

* Add so numbers changes in Makefile.ins for 1.8.22 release.

* Update pkgconfig settings with version - #218 (#223)

* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".

* Update 1.8 final release notice.

* Update CMake/HDF5Examples version in bin/release

* Fixed typo in an error message. (#227)

* Remove duplicate setting (#239)

* RELEASE.txt cleanup.

* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.

* )Update version.

* Reverts lock/unlock callback signature to 1.8.21 version (#254)

* Reverts lock/unlock callback signature to 1.8.21 version

This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs
that have the lock callback implemented and that is just as no-op stubs.
These stubs were removed so the callbacks are now NULL pointers, like
the other VFDs in 1.8.

* Trivial whitespace fix

* Update version to 1.8.22-14.

* Update version in H5public.h

Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>

* Set version 1.8.22 for release.

* dd RELEASE.txt entry for HDFFV-10741.

* Hdf5 1 8 22 (#279)

* Restores maintainer mode in the autotools (#200)

Maintainer mode should be enabled in development branches.

Also adds helpful commenting.

Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c

* Update configure for Restores maintainer mode in the autotools (#200).

* Update MANIFEST for switch_maint_mode script.

* Update so numbers for 1.8.22 release.

* Add so numbers changes in Makefile.ins for 1.8.22 release.

* Update pkgconfig settings with version - #218 (#223)

* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".

* Update 1.8 final release notice.

* Update CMake/HDF5Examples version in bin/release

* Fixed typo in an error message. (#227)

* Remove duplicate setting (#239)

* RELEASE.txt cleanup.

* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.

* )Update version.

* Reverts lock/unlock callback signature to 1.8.21 version (#254)

* Reverts lock/unlock callback signature to 1.8.21 version

This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs
that have the lock callback implemented and that is just as no-op stubs.
These stubs were removed so the callbacks are now NULL pointers, like
the other VFDs in 1.8.

* Trivial whitespace fix

* Update version to 1.8.22-14.

* Update version in H5public.h

* Set version 1.8.22 for release.

* dd RELEASE.txt entry for HDFFV-10741.

Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>

* Improve performance of multiple calls to H5Sget_select_elem_pointlist (#270) (#277)

* Cache the pointer to the next point to process after the last call to
H5S__get_select_elem_pointlist.  This allows the normal process of
iterating over the points in batches to be much more efficient, as the
library does not need to traverse the entirety of the preceding points
every time the funciton is re-entered.

* Update RELEASE.txt for point selection iteration performance fix.

* Hdf5 1 8 22 (#281)

* Restores maintainer mode in the autotools (#200)

Maintainer mode should be enabled in development branches.

Also adds helpful commenting.

Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c

* Update configure for Restores maintainer mode in the autotools (#200).

* Update MANIFEST for switch_maint_mode script.

* Update so numbers for 1.8.22 release.

* Add so numbers changes in Makefile.ins for 1.8.22 release.

* Update pkgconfig settings with version - #218 (#223)

* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".

* Update 1.8 final release notice.

* Update CMake/HDF5Examples version in bin/release

* Fixed typo in an error message. (#227)

* Remove duplicate setting (#239)

* RELEASE.txt cleanup.

* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.

* )Update version.

* Reverts lock/unlock callback signature to 1.8.21 version (#254)

* Reverts lock/unlock callback signature to 1.8.21 version

This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs
that have the lock callback implemented and that is just as no-op stubs.
These stubs were removed so the callbacks are now NULL pointers, like
the other VFDs in 1.8.

* Trivial whitespace fix

* Update version to 1.8.22-14.

* Update version in H5public.h

* Set version 1.8.22 for release.

* dd RELEASE.txt entry for HDFFV-10741.

* Improve performance of multiple calls to H5Sget_select_elem_pointlist (#270) (#277)

* Cache the pointer to the next point to process after the last call to
H5S__get_select_elem_pointlist.  This allows the normal process of
iterating over the points in batches to be much more efficient, as the
library does not need to traverse the entirety of the preceding points
every time the funciton is re-entered.

* Update RELEASE.txt for point selection iteration performance fix.

Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
Co-authored-by: Neil Fortner <nfortne2@hdfgroup.org>

* Hdf5 1 8 22 (#284)

* Fixed typo in an error message.

* Updated for HDFFV-11150, HDFFV-10480, and HDFFV-11159

* Update "Support for New Platforms and Compilers" section in RELEASE.txt;
add check_version workaround for binary compatibility to "Known
Problems".

* Add SUSE Linux to tested platforms.

* Update numbers in config/lt_vers.am and run bin/reconfigure for so
numbers.

* Update version in 3 files missed by merge.

Co-authored-by: Allen Byrne <byrn@hdfgroup.org>
Co-authored-by: Vailin Choi <vchoi@hdfgroup.org>
Co-authored-by: vchoi <vchoi@jelly.ad.hdfgroup.org>
Co-authored-by: hdftest <hdftest@hdfgroup.org>
Co-authored-by: Jordan Henderson <jhenderson@hdfgroup.org>
Co-authored-by: Dana Robinson <derobins@hdfgroup.org>
Co-authored-by: Binh-Minh Ribler <bmribler@hdfgroup.org>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org>
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Neil Fortner <nfortne2@hdfgroup.org>

1 files changed, 228 insertions, 169 deletions

diff --git a/c++/src/H5CommonFG.cpp b/c++/src/H5CommonFG.cpp
index 314a9fe..a8527e5 100644
--- a/c++/src/H5CommonFG.cpp
+++ b/c++/src/H5CommonFG.cpp
@@ -6,14 +6,14 @@
  * This file is part of HDF5.  The full HDF5 copyright notice, including     *
  * terms governing use, modification, and redistribution, is contained in    *
  * the COPYING file, which can be found at the root of the source code       *
- * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.  *
+ * distribution tree, or in https://www.hdfgroup.org/licenses.               *
  * If you do not have access to either file, you may request a copy from     *
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
 #include <string>
 
-#include "H5private.h"          // for HDmemset
+#include "H5private.h" // for HDmemset
 #include "H5Include.h"
 #include "H5Exception.h"
 #include "H5IdComponent.h"
@@ -72,14 +72,14 @@ namespace H5 {
 //      May 2018 - 1.8.21
 //          - Added an argument with default value LinkCreatPropList::DEFAULT
 //--------------------------------------------------------------------------
-Group CommonFG::createGroup(const char* name, size_t size_hint, const LinkCreatPropList& lcpl) const
+Group
+CommonFG::createGroup(const char *name, size_t size_hint, const LinkCreatPropList &lcpl) const
 {
     // Group creation property list for size hint
     hid_t gcpl_id = 0;
 
     // Set the local heap size hint
-    if (size_hint > 0)
-    {
+    if (size_hint > 0) {
         // If the creation of the property list failed, throw an exception
         if ((gcpl_id = H5Pcreate(H5P_GROUP_CREATE)) < 0)
             throwException("createGroup", "H5Pcreate failed");
@@ -95,18 +95,18 @@ Group CommonFG::createGroup(const char* name, size_t size_hint, const LinkCreatP
     hid_t group_id = H5Gcreate2(getLocId(), name, lcpl.getId(), gcpl_id, H5P_DEFAULT);
 
     // Close the group creation property list, if necessary
-    if(gcpl_id > 0)
+    if (gcpl_id > 0)
         H5Pclose(gcpl_id);
 
     // If the creation of the group failed, throw an exception
-    if(group_id < 0)
+    if (group_id < 0)
         throwException("createGroup", "H5Gcreate2 failed");
 
     // No failure, create and return the Group object
-    Group group;
+    Group     group;
     CommonFG *ptr = &group;
     ptr->p_setId(group_id);
-    return(group);
+    return (group);
 }
 
 //--------------------------------------------------------------------------
@@ -118,9 +118,10 @@ Group CommonFG::createGroup(const char* name, size_t size_hint, const LinkCreatP
 //      May 2018 - 1.8.21
 //          - Added LinkCreatPropList& with default value LinkCreatPropList::DEFAULT
 //--------------------------------------------------------------------------
-Group CommonFG::createGroup(const H5std_string& name, size_t size_hint, const LinkCreatPropList& lcpl) const
+Group
+CommonFG::createGroup(const H5std_string &name, size_t size_hint, const LinkCreatPropList &lcpl) const
 {
-    return(createGroup(name.c_str(), size_hint, lcpl));
+    return (createGroup(name.c_str(), size_hint, lcpl));
 }
 
 //--------------------------------------------------------------------------
@@ -132,21 +133,22 @@ Group CommonFG::createGroup(const H5std_string& name, size_t size_hint, const Li
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-Group CommonFG::openGroup(const char* name) const
+Group
+CommonFG::openGroup(const char *name) const
 {
     // Call C routine H5Gopen2 to open the named group, giving the
     // location id which can be a file id or a group id
     hid_t group_id = H5Gopen2(getLocId(), name, H5P_DEFAULT);
 
     // If the opening of the group failed, throw an exception
-    if(group_id < 0)
+    if (group_id < 0)
         throwException("openGroup", "H5Gopen2 failed");
 
     // No failure, create and return the Group object
-    Group group;
+    Group     group;
     CommonFG *ptr = &group;
     ptr->p_setId(group_id);
-    return(group);
+    return (group);
 }
 
 //--------------------------------------------------------------------------
@@ -156,9 +158,10 @@ Group CommonFG::openGroup(const char* name) const
 ///             \c H5std_string for \a name.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-Group CommonFG::openGroup(const H5std_string& name) const
+Group
+CommonFG::openGroup(const H5std_string &name) const
 {
-    return(openGroup(name.c_str()));
+    return (openGroup(name.c_str()));
 }
 
 //--------------------------------------------------------------------------
@@ -172,24 +175,27 @@ Group CommonFG::openGroup(const H5std_string& name) const
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DataSet CommonFG::createDataSet(const char* name, const DataType& data_type, const DataSpace& data_space, const DSetCreatPropList& create_plist) const
+DataSet
+CommonFG::createDataSet(const char *name, const DataType &data_type, const DataSpace &data_space,
+                        const DSetCreatPropList &create_plist) const
 {
     // Obtain identifiers for C API
-    hid_t type_id = data_type.getId();
-    hid_t space_id = data_space.getId();
+    hid_t type_id         = data_type.getId();
+    hid_t space_id        = data_space.getId();
     hid_t create_plist_id = create_plist.getId();
 
     // Call C routine H5Dcreate2 to create the named dataset
-    hid_t dataset_id = H5Dcreate2(getLocId(), name, type_id, space_id, H5P_DEFAULT, create_plist_id, H5P_DEFAULT);
+    hid_t dataset_id =
+        H5Dcreate2(getLocId(), name, type_id, space_id, H5P_DEFAULT, create_plist_id, H5P_DEFAULT);
 
     // If the creation of the dataset failed, throw an exception
-    if(dataset_id < 0)
+    if (dataset_id < 0)
         throwException("createDataSet", "H5Dcreate2 failed");
 
     // No failure, create and return the DataSet object
     DataSet dataset;
     f_DataSet_setId(&dataset, dataset_id);
-    return(dataset);
+    return (dataset);
 }
 
 //--------------------------------------------------------------------------
@@ -199,9 +205,11 @@ DataSet CommonFG::createDataSet(const char* name, const DataType& data_type, con
 ///             \c H5std_string for \a name.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DataSet CommonFG::createDataSet(const H5std_string& name, const DataType& data_type, const DataSpace& data_space, const DSetCreatPropList& create_plist) const
+DataSet
+CommonFG::createDataSet(const H5std_string &name, const DataType &data_type, const DataSpace &data_space,
+                        const DSetCreatPropList &create_plist) const
 {
-    return(createDataSet(name.c_str(), data_type, data_space, create_plist));
+    return (createDataSet(name.c_str(), data_type, data_space, create_plist));
 }
 
 //--------------------------------------------------------------------------
@@ -212,20 +220,21 @@ DataSet CommonFG::createDataSet(const H5std_string& name, const DataType& data_t
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DataSet CommonFG::openDataSet(const char* name) const
+DataSet
+CommonFG::openDataSet(const char *name) const
 {
     // Call C function H5Dopen2 to open the specified dataset, giving
     // the location id and the dataset's name
     hid_t dataset_id = H5Dopen2(getLocId(), name, H5P_DEFAULT);
 
     // If the dataset's opening failed, throw an exception
-    if(dataset_id < 0)
+    if (dataset_id < 0)
         throwException("openDataSet", "H5Dopen2 failed");
 
     // No failure, create and return the DataSet object
     DataSet dataset;
     f_DataSet_setId(&dataset, dataset_id);
-    return(dataset);
+    return (dataset);
 }
 
 //--------------------------------------------------------------------------
@@ -235,9 +244,10 @@ DataSet CommonFG::openDataSet(const char* name) const
 ///             \c H5std_string for \a name.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DataSet CommonFG::openDataSet(const H5std_string& name) const
+DataSet
+CommonFG::openDataSet(const H5std_string &name) const
 {
-    return(openDataSet(name.c_str()));
+    return (openDataSet(name.c_str()));
 }
 
 //--------------------------------------------------------------------------
@@ -262,13 +272,15 @@ DataSet CommonFG::openDataSet(const H5std_string& name) const
 // Modification
 //      2007: QAK modified to use H5L APIs - BMR
 //--------------------------------------------------------------------------
-void CommonFG::link(H5L_type_t link_type, const char* curr_name, const char* new_name) const
+void
+CommonFG::link(H5L_type_t link_type, const char *curr_name, const char *new_name) const
 {
     herr_t ret_value = -1;
 
-    switch(link_type) {
+    switch (link_type) {
         case H5L_TYPE_HARD:
-            ret_value = H5Lcreate_hard(getLocId(), curr_name, H5L_SAME_LOC, new_name, H5P_DEFAULT, H5P_DEFAULT);
+            ret_value =
+                H5Lcreate_hard(getLocId(), curr_name, H5L_SAME_LOC, new_name, H5P_DEFAULT, H5P_DEFAULT);
             break;
 
         case H5L_TYPE_SOFT:
@@ -283,7 +295,7 @@ void CommonFG::link(H5L_type_t link_type, const char* curr_name, const char* new
             break;
     } /* end switch */
 
-    if(ret_value < 0)
+    if (ret_value < 0)
         throwException("link", "creating link failed");
 }
 
@@ -294,7 +306,8 @@ void CommonFG::link(H5L_type_t link_type, const char* curr_name, const char* new
 ///             \c H5std_string for \a curr_name and \a new_name.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-void CommonFG::link(H5L_type_t link_type, const H5std_string& curr_name, const H5std_string& new_name) const
+void
+CommonFG::link(H5L_type_t link_type, const H5std_string &curr_name, const H5std_string &new_name) const
 {
     link(link_type, curr_name.c_str(), new_name.c_str());
 }
@@ -348,10 +361,11 @@ void CommonFG::unlink(const H5std_string& name) const
 //      2007: QAK modified to use H5L APIs - BMR
 //      May 2018: Deprecated in favor of H5Location::moveLink (1.8.21)
 //--------------------------------------------------------------------------
-void CommonFG::move(const char* src, const char* dst) const
+void
+CommonFG::move(const char *src, const char *dst) const
 {
     herr_t ret_value = H5Lmove(getLocId(), src, H5L_SAME_LOC, dst, H5P_DEFAULT, H5P_DEFAULT);
-    if(ret_value < 0)
+    if (ret_value < 0)
         throwException("move", "H5Lmove failed");
 }
 
@@ -364,7 +378,8 @@ void CommonFG::move(const char* src, const char* dst) const
 // Modification
 //      May 2018: Deprecated in favor of H5Location::moveLink (1.8.21)
 //--------------------------------------------------------------------------
-void CommonFG::move(const H5std_string& src, const H5std_string& dst) const
+void
+CommonFG::move(const H5std_string &src, const H5std_string &dst) const
 {
     move(src.c_str(), dst.c_str());
 }
@@ -383,10 +398,11 @@ void CommonFG::move(const H5std_string& src, const H5std_string& dst) const
 /// https://support.hdfgroup.org/HDF5/doc/RM/RM_H5G.html#Group-GetObjinfo
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-void CommonFG::getObjinfo(const char* name, hbool_t follow_link, H5G_stat_t& statbuf) const
+void
+CommonFG::getObjinfo(const char *name, hbool_t follow_link, H5G_stat_t &statbuf) const
 {
     herr_t ret_value = H5Gget_objinfo(getLocId(), name, follow_link, &statbuf);
-    if(ret_value < 0)
+    if (ret_value < 0)
         throwException("getObjinfo", "H5Gget_objinfo failed");
 }
 
@@ -397,7 +413,8 @@ void CommonFG::getObjinfo(const char* name, hbool_t follow_link, H5G_stat_t& sta
 ///             \c H5std_string for \a name.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-void CommonFG::getObjinfo(const H5std_string& name, hbool_t follow_link, H5G_stat_t& statbuf) const
+void
+CommonFG::getObjinfo(const H5std_string &name, hbool_t follow_link, H5G_stat_t &statbuf) const
 {
     getObjinfo(name.c_str(), follow_link, statbuf);
 }
@@ -410,10 +427,11 @@ void CommonFG::getObjinfo(const H5std_string& name, hbool_t follow_link, H5G_sta
 // Programmer   Binh-Minh Ribler - Nov, 2005
 // Note: need to modify to use H5Oget_info and H5Lget_info - BMR
 //--------------------------------------------------------------------------
-void CommonFG::getObjinfo(const char* name, H5G_stat_t& statbuf) const
+void
+CommonFG::getObjinfo(const char *name, H5G_stat_t &statbuf) const
 {
     herr_t ret_value = H5Gget_objinfo(getLocId(), name, 0, &statbuf);
-    if(ret_value < 0)
+    if (ret_value < 0)
         throwException("getObjinfo", "H5Gget_objinfo failed");
 }
 
@@ -424,7 +442,8 @@ void CommonFG::getObjinfo(const char* name, H5G_stat_t& statbuf) const
 ///             \c H5std_string for \a name.
 // Programmer   Binh-Minh Ribler - Nov, 2005
 //--------------------------------------------------------------------------
-void CommonFG::getObjinfo(const H5std_string& name, H5G_stat_t& statbuf) const
+void
+CommonFG::getObjinfo(const H5std_string &name, H5G_stat_t &statbuf) const
 {
     getObjinfo(name.c_str(), statbuf);
 }
@@ -503,7 +522,8 @@ H5std_string CommonFG::getLinkval(const H5std_string& name, size_t size) const
 // Modification
 //              Replaced the version without const parameter - Apr, 2014
 //--------------------------------------------------------------------------
-void CommonFG::mount(const char* name, const H5File& child, const PropList& plist) const
+void
+CommonFG::mount(const char *name, const H5File &child, const PropList &plist) const
 {
     // Obtain identifiers for C API
     hid_t plist_id = plist.getId();
@@ -513,7 +533,7 @@ void CommonFG::mount(const char* name, const H5File& child, const PropList& plis
     herr_t ret_value = H5Fmount(getLocId(), name, child_id, plist_id);
 
     // Raise exception if H5Fmount returns negative value
-    if(ret_value < 0)
+    if (ret_value < 0)
         throwException("mount", "H5Fmount failed");
 }
 
@@ -525,7 +545,8 @@ void CommonFG::mount(const char* name, const H5File& child, const PropList& plis
 // Modification
 //              Replaced the version without const parameter - Apr, 2014
 //--------------------------------------------------------------------------
-void CommonFG::mount(const H5std_string& name, const H5File& child, const PropList& plist) const
+void
+CommonFG::mount(const H5std_string &name, const H5File &child, const PropList &plist) const
 {
     mount(name.c_str(), child, plist);
 }
@@ -537,13 +558,14 @@ void CommonFG::mount(const H5std_string& name, const H5File& child, const PropLi
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-void CommonFG::unmount(const char* name) const
+void
+CommonFG::unmount(const char *name) const
 {
     // Call C routine H5Fmount to do the mouting
     herr_t ret_value = H5Funmount(getLocId(), name);
 
     // Raise exception if H5Funmount returns negative value
-    if(ret_value < 0)
+    if (ret_value < 0)
         throwException("unmount", "H5Funmount failed");
 }
 
@@ -554,7 +576,8 @@ void CommonFG::unmount(const char* name) const
 ///             \c H5std_string for \a name.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-void CommonFG::unmount(const H5std_string& name) const
+void
+CommonFG::unmount(const H5std_string &name) const
 {
     unmount(name.c_str());
 }
@@ -567,20 +590,21 @@ void CommonFG::unmount(const H5std_string& name) const
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DataType CommonFG::openDataType(const char* name) const
+DataType
+CommonFG::openDataType(const char *name) const
 {
     // Call C function H5Topen2 to open the named datatype in this group,
     // given either the file or group id
     hid_t type_id = H5Topen2(getLocId(), name, H5P_DEFAULT);
 
     // If the datatype's opening failed, throw an exception
-    if(type_id < 0)
+    if (type_id < 0)
         throwException("openDataType", "H5Topen2 failed");
 
     // No failure, create and return the DataType object
     DataType data_type;
     f_DataType_setId(&data_type, type_id);
-    return(data_type);
+    return (data_type);
 }
 
 //--------------------------------------------------------------------------
@@ -590,9 +614,10 @@ DataType CommonFG::openDataType(const char* name) const
 ///             \c H5std_string for \a name.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DataType CommonFG::openDataType(const H5std_string& name) const
+DataType
+CommonFG::openDataType(const H5std_string &name) const
 {
-    return(openDataType(name.c_str()));
+    return (openDataType(name.c_str()));
 }
 
 //--------------------------------------------------------------------------
@@ -603,20 +628,21 @@ DataType CommonFG::openDataType(const H5std_string& name) const
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - Jul, 2005
 //--------------------------------------------------------------------------
-ArrayType CommonFG::openArrayType(const char* name) const
+ArrayType
+CommonFG::openArrayType(const char *name) const
 {
     // Call C function H5Topen2 to open the named datatype in this group,
     // given either the file or group id
     hid_t type_id = H5Topen2(getLocId(), name, H5P_DEFAULT);
 
     // If the datatype's opening failed, throw an exception
-    if(type_id < 0)
+    if (type_id < 0)
         throwException("openArrayType", "H5Topen2 failed");
 
     // No failure, create and return the ArrayType object
     ArrayType array_type;
     f_DataType_setId(&array_type, type_id);
-    return(array_type);
+    return (array_type);
 }
 
 //--------------------------------------------------------------------------
@@ -626,9 +652,10 @@ ArrayType CommonFG::openArrayType(const char* name) const
 ///             \c H5std_string for \a name.
 // Programmer   Binh-Minh Ribler - Jul, 2005
 //--------------------------------------------------------------------------
-ArrayType CommonFG::openArrayType(const H5std_string& name) const
+ArrayType
+CommonFG::openArrayType(const H5std_string &name) const
 {
-    return(openArrayType(name.c_str()));
+    return (openArrayType(name.c_str()));
 }
 
 //--------------------------------------------------------------------------
@@ -639,20 +666,21 @@ ArrayType CommonFG::openArrayType(const H5std_string& name) const
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-CompType CommonFG::openCompType(const char* name) const
+CompType
+CommonFG::openCompType(const char *name) const
 {
     // Call C function H5Topen2 to open the named datatype in this group,
     // given either the file or group id
     hid_t type_id = H5Topen2(getLocId(), name, H5P_DEFAULT);
 
     // If the datatype's opening failed, throw an exception
-    if(type_id < 0)
+    if (type_id < 0)
         throwException("openCompType", "H5Topen2 failed");
 
     // No failure, create and return the CompType object
     CompType comp_type;
     f_DataType_setId(&comp_type, type_id);
-    return(comp_type);
+    return (comp_type);
 }
 
 //--------------------------------------------------------------------------
@@ -662,9 +690,10 @@ CompType CommonFG::openCompType(const char* name) const
 ///             \c H5std_string for \a name.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-CompType CommonFG::openCompType(const H5std_string& name) const
+CompType
+CommonFG::openCompType(const H5std_string &name) const
 {
-    return(openCompType(name.c_str()));
+    return (openCompType(name.c_str()));
 }
 
 //--------------------------------------------------------------------------
@@ -675,20 +704,21 @@ CompType CommonFG::openCompType(const H5std_string& name) const
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-EnumType CommonFG::openEnumType(const char* name) const
+EnumType
+CommonFG::openEnumType(const char *name) const
 {
     // Call C function H5Topen2 to open the named datatype in this group,
     // given either the file or group id
     hid_t type_id = H5Topen2(getLocId(), name, H5P_DEFAULT);
 
     // If the datatype's opening failed, throw an exception
-    if(type_id < 0)
+    if (type_id < 0)
         throwException("openEnumType", "H5Topen2 failed");
 
     // No failure, create and return the EnumType object
     EnumType enum_type;
     f_DataType_setId(&enum_type, type_id);
-    return(enum_type);
+    return (enum_type);
 }
 
 //--------------------------------------------------------------------------
@@ -698,9 +728,10 @@ EnumType CommonFG::openEnumType(const char* name) const
 ///             \c H5std_string for \a name.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-EnumType CommonFG::openEnumType(const H5std_string& name) const
+EnumType
+CommonFG::openEnumType(const H5std_string &name) const
 {
-    return(openEnumType(name.c_str()));
+    return (openEnumType(name.c_str()));
 }
 
 //--------------------------------------------------------------------------
@@ -711,20 +742,21 @@ EnumType CommonFG::openEnumType(const H5std_string& name) const
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-IntType CommonFG::openIntType(const char* name) const
+IntType
+CommonFG::openIntType(const char *name) const
 {
     // Call C function H5Topen2 to open the named datatype in this group,
     // given either the file or group id
     hid_t type_id = H5Topen2(getLocId(), name, H5P_DEFAULT);
 
     // If the datatype's opening failed, throw an exception
-    if(type_id < 0)
+    if (type_id < 0)
         throwException("openIntType", "H5Topen2 failed");
 
     // No failure, create and return the IntType object
     IntType int_type;
     f_DataType_setId(&int_type, type_id);
-    return(int_type);
+    return (int_type);
 }
 
 //--------------------------------------------------------------------------
@@ -734,9 +766,10 @@ IntType CommonFG::openIntType(const char* name) const
 ///             \c H5std_string for \a name.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-IntType CommonFG::openIntType(const H5std_string& name) const
+IntType
+CommonFG::openIntType(const H5std_string &name) const
 {
-    return(openIntType(name.c_str()));
+    return (openIntType(name.c_str()));
 }
 
 //--------------------------------------------------------------------------
@@ -747,20 +780,21 @@ IntType CommonFG::openIntType(const H5std_string& name) const
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-FloatType CommonFG::openFloatType(const char* name) const
+FloatType
+CommonFG::openFloatType(const char *name) const
 {
     // Call C function H5Topen2 to open the named datatype in this group,
     // given either the file or group id
     hid_t type_id = H5Topen2(getLocId(), name, H5P_DEFAULT);
 
     // If the datatype's opening failed, throw an exception
-    if(type_id < 0)
+    if (type_id < 0)
         throwException("openFloatType", "H5Topen2 failed");
 
     // No failure, create and return the FloatType object
     FloatType float_type;
     f_DataType_setId(&float_type, type_id);
-    return(float_type);
+    return (float_type);
 }
 
 //--------------------------------------------------------------------------
@@ -770,9 +804,10 @@ FloatType CommonFG::openFloatType(const char* name) const
 ///             \c H5std_string for \a name.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-FloatType CommonFG::openFloatType(const H5std_string& name) const
+FloatType
+CommonFG::openFloatType(const H5std_string &name) const
 {
-    return(openFloatType(name.c_str()));
+    return (openFloatType(name.c_str()));
 }
 
 //--------------------------------------------------------------------------
@@ -783,20 +818,21 @@ FloatType CommonFG::openFloatType(const H5std_string& name) const
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-StrType CommonFG::openStrType(const char* name) const
+StrType
+CommonFG::openStrType(const char *name) const
 {
     // Call C function H5Topen2 to open the named datatype in this group,
     // given either the file or group id
     hid_t type_id = H5Topen2(getLocId(), name, H5P_DEFAULT);
 
     // If the datatype's opening failed, throw an exception
-    if(type_id < 0)
+    if (type_id < 0)
         throwException("openStrType", "H5Topen2 failed");
 
     // No failure, create and return the StrType object
     StrType str_type;
     f_DataType_setId(&str_type, type_id);
-    return(str_type);
+    return (str_type);
 }
 
 //--------------------------------------------------------------------------
@@ -806,9 +842,10 @@ StrType CommonFG::openStrType(const char* name) const
 ///             \c H5std_string for \a name.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-StrType CommonFG::openStrType(const H5std_string& name) const
+StrType
+CommonFG::openStrType(const H5std_string &name) const
 {
-    return(openStrType(name.c_str()));
+    return (openStrType(name.c_str()));
 }
 
 //--------------------------------------------------------------------------
@@ -819,20 +856,21 @@ StrType CommonFG::openStrType(const H5std_string& name) const
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - Jul, 2005
 //--------------------------------------------------------------------------
-VarLenType CommonFG::openVarLenType(const char* name) const
+VarLenType
+CommonFG::openVarLenType(const char *name) const
 {
     // Call C function H5Topen2 to open the named datatype in this group,
     // given either the file or group id
     hid_t type_id = H5Topen2(getLocId(), name, H5P_DEFAULT);
 
     // If the datatype's opening failed, throw an exception
-    if(type_id < 0)
+    if (type_id < 0)
         throwException("openVarLenType", "H5Topen2 failed");
 
     // No failure, create and return the VarLenType object
     VarLenType varlen_type;
     f_DataType_setId(&varlen_type, type_id);
-    return(varlen_type);
+    return (varlen_type);
 }
 
 //--------------------------------------------------------------------------
@@ -842,9 +880,10 @@ VarLenType CommonFG::openVarLenType(const char* name) const
 ///             \c H5std_string for \a name.
 // Programmer   Binh-Minh Ribler - Jul, 2005
 //--------------------------------------------------------------------------
-VarLenType CommonFG::openVarLenType(const H5std_string& name) const
+VarLenType
+CommonFG::openVarLenType(const H5std_string &name) const
 {
-    return(openVarLenType(name.c_str()));
+    return (openVarLenType(name.c_str()));
 }
 
 #ifndef H5_NO_DEPRECATED_SYMBOLS
@@ -861,14 +900,14 @@ VarLenType CommonFG::openVarLenType(const H5std_string& name) const
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-int CommonFG::iterateElems(const char* name, int *idx, H5G_iterate_t op , void* op_data)
+int
+CommonFG::iterateElems(const char *name, int *idx, H5G_iterate_t op, void *op_data)
 {
     int ret_value = H5Giterate(getLocId(), name, idx, op, op_data);
-    if(ret_value < 0)
-    {
+    if (ret_value < 0) {
         throwException("iterateElems", "H5Giterate failed");
     }
-    return(ret_value);
+    return (ret_value);
 }
 
 //--------------------------------------------------------------------------
@@ -878,9 +917,10 @@ int CommonFG::iterateElems(const char* name, int *idx, H5G_iterate_t op , void*
 ///             \c H5std_string for \a name.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-int CommonFG::iterateElems(const H5std_string& name, int *idx, H5G_iterate_t op , void* op_data)
+int
+CommonFG::iterateElems(const H5std_string &name, int *idx, H5G_iterate_t op, void *op_data)
 {
-    return(iterateElems(name.c_str(), idx, op, op_data));
+    return (iterateElems(name.c_str(), idx, op, op_data));
 }
 #endif /* H5_NO_DEPRECATED_SYMBOLS */
 
@@ -891,12 +931,13 @@ int CommonFG::iterateElems(const H5std_string& name, int *idx, H5G_iterate_t op
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - January, 2003
 //--------------------------------------------------------------------------
-hsize_t CommonFG::getNumObjs() const
+hsize_t
+CommonFG::getNumObjs() const
 {
-    H5G_info_t           ginfo;                  /* Group information */
+    H5G_info_t ginfo; /* Group information */
 
     herr_t ret_value = H5Gget_info(getLocId(), &ginfo);
-    if(ret_value < 0)
+    if (ret_value < 0)
         throwException("getNumObjs", "H5Gget_info failed");
     return (ginfo.nlinks);
 }
@@ -916,28 +957,30 @@ hsize_t CommonFG::getNumObjs() const
 ///             each time the group is opened.
 // Programmer   Binh-Minh Ribler - Mar, 2005
 //--------------------------------------------------------------------------
-H5std_string CommonFG::getObjnameByIdx(hsize_t idx) const
+H5std_string
+CommonFG::getObjnameByIdx(hsize_t idx) const
 {
     // call H5Lget_name_by_idx with name as NULL to get its length
-    ssize_t name_len = H5Lget_name_by_idx(getLocId(), ".", H5_INDEX_NAME, H5_ITER_INC, idx, NULL, 0, H5P_DEFAULT);
-    if(name_len < 0)
+    ssize_t name_len =
+        H5Lget_name_by_idx(getLocId(), ".", H5_INDEX_NAME, H5_ITER_INC, idx, NULL, 0, H5P_DEFAULT);
+    if (name_len < 0)
         throwException("getObjnameByIdx", "H5Lget_name_by_idx failed");
 
     // now, allocate C buffer to get the name
-    char* name_C = new char[name_len+1];
-    HDmemset(name_C, 0, name_len+1); // clear buffer
+    char *name_C = new char[name_len + 1];
+    HDmemset(name_C, 0, name_len + 1); // clear buffer
 
-    name_len = H5Lget_name_by_idx(getLocId(), ".", H5_INDEX_NAME, H5_ITER_INC, idx, name_C, name_len+1, H5P_DEFAULT);
+    name_len = H5Lget_name_by_idx(getLocId(), ".", H5_INDEX_NAME, H5_ITER_INC, idx, name_C, name_len + 1,
+                                  H5P_DEFAULT);
 
-    if (name_len < 0)
-    {
-        delete []name_C;
+    if (name_len < 0) {
+        delete[] name_C;
         throwException("getObjnameByIdx", "H5Lget_name_by_idx failed");
     }
 
     // clean up and return the string
     H5std_string name = H5std_string(name_C);
-    delete []name_C;
+    delete[] name_C;
     return (name);
 }
 
@@ -958,10 +1001,12 @@ H5std_string CommonFG::getObjnameByIdx(hsize_t idx) const
 ///             each time the group is opened.
 // Programmer   Binh-Minh Ribler - January, 2003
 //--------------------------------------------------------------------------
-ssize_t CommonFG::getObjnameByIdx(hsize_t idx, char* name, size_t size) const
+ssize_t
+CommonFG::getObjnameByIdx(hsize_t idx, char *name, size_t size) const
 {
-    ssize_t name_len = H5Lget_name_by_idx(getLocId(), ".", H5_INDEX_NAME, H5_ITER_INC, idx, name, size, H5P_DEFAULT);
-    if(name_len < 0)
+    ssize_t name_len =
+        H5Lget_name_by_idx(getLocId(), ".", H5_INDEX_NAME, H5_ITER_INC, idx, name, size, H5P_DEFAULT);
+    if (name_len < 0)
         throwException("getObjnameByIdx", "H5Lget_name_by_idx failed");
 
     return (name_len);
@@ -974,22 +1019,22 @@ ssize_t CommonFG::getObjnameByIdx(hsize_t idx, char* name, size_t size) const
 ///             \c H5std_string for \a name.
 // Programmer   Binh-Minh Ribler - January, 2003
 //--------------------------------------------------------------------------
-ssize_t CommonFG::getObjnameByIdx(hsize_t idx, H5std_string& name, size_t size) const
+ssize_t
+CommonFG::getObjnameByIdx(hsize_t idx, H5std_string &name, size_t size) const
 {
-    char* name_C = new char[size+1]; // temporary C-string for object name
-    HDmemset(name_C, 0, size+1); // clear buffer
+    char *name_C = new char[size + 1]; // temporary C-string for object name
+    HDmemset(name_C, 0, size + 1);     // clear buffer
 
     // call overloaded function to get the name
-    ssize_t name_len = getObjnameByIdx(idx, name_C, size+1);
-    if(name_len < 0)
-    {
-      delete []name_C;
+    ssize_t name_len = getObjnameByIdx(idx, name_C, size + 1);
+    if (name_len < 0) {
+        delete[] name_C;
         throwException("getObjnameByIdx", "H5Lget_name_by_idx failed");
     }
 
     // clean up and return the string
     name = H5std_string(name_C);
-    delete []name_C;
+    delete[] name_C;
     return (name_len);
 }
 
@@ -1011,7 +1056,8 @@ ssize_t CommonFG::getObjnameByIdx(hsize_t idx, H5std_string& name, size_t size)
 ///             - object type is not one of the valid values above
 // Programmer   Binh-Minh Ribler - April, 2014
 //--------------------------------------------------------------------------
-H5O_type_t CommonFG::childObjType(const char* objname) const
+H5O_type_t
+CommonFG::childObjType(const char *objname) const
 {
     H5O_info_t objinfo;
     H5O_type_t objtype = H5O_TYPE_UNKNOWN;
@@ -1024,19 +1070,18 @@ H5O_type_t CommonFG::childObjType(const char* objname) const
         throwException("childObjType", "H5Oget_info_by_name failed");
     // Return a valid type or throw an exception for unknown type
     else
-      switch (objinfo.type)
-        {
-        case H5O_TYPE_GROUP:
-        case H5O_TYPE_DATASET:
-        case H5O_TYPE_NAMED_DATATYPE:
-            objtype = objinfo.type;
-            break;
-        case H5O_TYPE_UNKNOWN:
-        case H5O_TYPE_NTYPES:
-        default:
-            throwException("childObjType", "Unknown type of object");
+        switch (objinfo.type) {
+            case H5O_TYPE_GROUP:
+            case H5O_TYPE_DATASET:
+            case H5O_TYPE_NAMED_DATATYPE:
+                objtype = objinfo.type;
+                break;
+            case H5O_TYPE_UNKNOWN:
+            case H5O_TYPE_NTYPES:
+            default:
+                throwException("childObjType", "Unknown type of object");
         }
-    return(objtype);
+    return (objtype);
 }
 
 //--------------------------------------------------------------------------
@@ -1049,11 +1094,12 @@ H5O_type_t CommonFG::childObjType(const char* objname) const
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - April, 2014
 //--------------------------------------------------------------------------
-H5O_type_t CommonFG::childObjType(const H5std_string& objname) const
+H5O_type_t
+CommonFG::childObjType(const H5std_string &objname) const
 {
     // Use overloaded function
     H5O_type_t objtype = childObjType(objname.c_str());
-    return(objtype);
+    return (objtype);
 }
 
 //--------------------------------------------------------------------------
@@ -1085,9 +1131,10 @@ H5O_type_t CommonFG::childObjType(const H5std_string& objname) const
 //        can be added later when needed.
 // Programmer   Binh-Minh Ribler - April, 2014
 //--------------------------------------------------------------------------
-H5O_type_t CommonFG::childObjType(hsize_t index, H5_index_t index_type, H5_iter_order_t order, const char* objname) const
+H5O_type_t
+CommonFG::childObjType(hsize_t index, H5_index_t index_type, H5_iter_order_t order, const char *objname) const
 {
-    herr_t ret_value;
+    herr_t     ret_value;
     H5O_info_t objinfo;
     H5O_type_t objtype = H5O_TYPE_UNKNOWN;
 
@@ -1099,19 +1146,18 @@ H5O_type_t CommonFG::childObjType(hsize_t index, H5_index_t index_type, H5_iter_
         throwException("childObjType", "H5Oget_info_by_idx failed");
     // Return a valid type or throw an exception for unknown type
     else
-      switch (objinfo.type)
-        {
-        case H5O_TYPE_GROUP:
-        case H5O_TYPE_DATASET:
-        case H5O_TYPE_NAMED_DATATYPE:
-            objtype = objinfo.type;
-            break;
-        case H5O_TYPE_UNKNOWN:
-        case H5O_TYPE_NTYPES:
-        default:
-            throwException("childObjType", "Unknown type of object");
+        switch (objinfo.type) {
+            case H5O_TYPE_GROUP:
+            case H5O_TYPE_DATASET:
+            case H5O_TYPE_NAMED_DATATYPE:
+                objtype = objinfo.type;
+                break;
+            case H5O_TYPE_UNKNOWN:
+            case H5O_TYPE_NTYPES:
+            default:
+                throwException("childObjType", "Unknown type of object");
         }
-    return(objtype);
+    return (objtype);
 }
 
 //--------------------------------------------------------------------------
@@ -1128,10 +1174,11 @@ H5O_type_t CommonFG::childObjType(hsize_t index, H5_index_t index_type, H5_iter_
 ///             - version number is not one of the valid values above
 // Programmer   Binh-Minh Ribler - April, 2014
 //--------------------------------------------------------------------------
-unsigned CommonFG::childObjVersion(const char* objname) const
+unsigned
+CommonFG::childObjVersion(const char *objname) const
 {
     H5O_info_t objinfo;
-    unsigned version = 0;
+    unsigned   version = 0;
 
     // Use C API to get information of the object
     herr_t ret_value = H5Oget_info_by_name(getLocId(), objname, &objinfo, H5P_DEFAULT);
@@ -1140,13 +1187,12 @@ unsigned CommonFG::childObjVersion(const char* objname) const
     if (ret_value < 0)
         throwException("childObjVersion", "H5Oget_info_by_name failed");
     // Return a valid version or throw an exception for invalid value
-    else
-    {
+    else {
         version = objinfo.hdr.version;
         if (version != H5O_VERSION_1 && version != H5O_VERSION_2)
             throwException("childObjVersion", "Invalid version for object");
     }
-    return(version);
+    return (version);
 }
 
 //--------------------------------------------------------------------------
@@ -1159,11 +1205,12 @@ unsigned CommonFG::childObjVersion(const char* objname) const
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - April, 2014
 //--------------------------------------------------------------------------
-unsigned CommonFG::childObjVersion(const H5std_string& objname) const
+unsigned
+CommonFG::childObjVersion(const H5std_string &objname) const
 {
     // Use overloaded function
     unsigned version = childObjVersion(objname.c_str());
-    return(version);
+    return (version);
 }
 
 #ifndef H5_NO_DEPRECATED_SYMBOLS
@@ -1177,7 +1224,8 @@ unsigned CommonFG::childObjVersion(const H5std_string& objname) const
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - January, 2003
 //--------------------------------------------------------------------------
-H5G_obj_t CommonFG::getObjTypeByIdx(hsize_t idx) const
+H5G_obj_t
+CommonFG::getObjTypeByIdx(hsize_t idx) const
 {
     H5G_obj_t obj_type = H5Gget_objtype_by_idx(getLocId(), idx);
     if (obj_type == H5G_UNKNOWN)
@@ -1199,10 +1247,11 @@ H5G_obj_t CommonFG::getObjTypeByIdx(hsize_t idx) const
 // Modification
 //              Modified to use the other function. -BMR, 2016/03/07
 //--------------------------------------------------------------------------
-H5G_obj_t CommonFG::getObjTypeByIdx(hsize_t idx, char* type_name) const
+H5G_obj_t
+CommonFG::getObjTypeByIdx(hsize_t idx, char *type_name) const
 {
     H5std_string stype_name(type_name);
-    return(getObjTypeByIdx(idx, stype_name));
+    return (getObjTypeByIdx(idx, stype_name));
 }
 //--------------------------------------------------------------------------
 // Function:    CommonFG::getObjTypeByIdx
@@ -1215,15 +1264,23 @@ H5G_obj_t CommonFG::getObjTypeByIdx(hsize_t idx, char* type_name) const
 ///\exception   H5::FileIException or H5::GroupIException
 // Programmer   Binh-Minh Ribler - January, 2003
 //--------------------------------------------------------------------------
-H5G_obj_t CommonFG::getObjTypeByIdx(hsize_t idx, H5std_string& type_name) const
+H5G_obj_t
+CommonFG::getObjTypeByIdx(hsize_t idx, H5std_string &type_name) const
 {
     H5G_obj_t obj_type = H5Gget_objtype_by_idx(getLocId(), idx);
-    switch (obj_type)
-    {
-        case H5G_LINK: type_name = H5std_string("symbolic link"); break;
-        case H5G_GROUP: type_name = H5std_string("group"); break;
-        case H5G_DATASET: type_name = H5std_string("dataset"); break;
-        case H5G_TYPE: type_name = H5std_string("datatype"); break;
+    switch (obj_type) {
+        case H5G_LINK:
+            type_name = H5std_string("symbolic link");
+            break;
+        case H5G_GROUP:
+            type_name = H5std_string("group");
+            break;
+        case H5G_DATASET:
+            type_name = H5std_string("dataset");
+            break;
+        case H5G_TYPE:
+            type_name = H5std_string("datatype");
+            break;
         case H5G_UNKNOWN:
         case H5G_UDLINK:
         case H5G_RESERVED_5:
@@ -1263,7 +1320,8 @@ CommonFG::~CommonFG() {}
 // param        new_id - IN: New id to set
 // Programmer   Binh-Minh Ribler - 2015
 //--------------------------------------------------------------------------
-void f_DataType_setId(DataType* dtype, hid_t new_id)
+void
+f_DataType_setId(DataType *dtype, hid_t new_id)
 {
     dtype->p_setId(new_id);
 }
@@ -1278,11 +1336,12 @@ void f_DataType_setId(DataType* dtype, hid_t new_id)
 // param        new_id - IN: New id to set
 // Programmer   Binh-Minh Ribler - 2015
 //--------------------------------------------------------------------------
-void f_DataSet_setId(DataSet* dset, hid_t new_id)
+void
+f_DataSet_setId(DataSet *dset, hid_t new_id)
 {
     dset->p_setId(new_id);
 }
 
 #endif // DOXYGEN_SHOULD_SKIP_THIS
 
-} // end namespace
+} // namespace H5