diff options
| author | Larry Knox <lrknox@hdfgroup.org> | 2021-02-08 16:56:16 (GMT) |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2021-02-08 16:56:16 (GMT) |
| commit | 22c67ff6570f16050f0a5654cf1c84df917bb598 (patch) | |
| tree | 38fb63aa498b250c2543fe7e22a511706de96a42 /configure | |
| parent | 551f15f8ae02ca9c995619b216121081eb07633e (diff) | |
| download | hdf5-hdf5-1_8_22.zip hdf5-hdf5-1_8_22.tar.gz hdf5-hdf5-1_8_22.tar.bz2 | |
1.8/master (#317)hdf5-1_8_22
* Revert incorrect bool type
* Correct grep text for filter test
* Check sizeof type to use correct ref_type
* h5dump reg ref chnages has no error file
* Fix comment
* Remove unneeded files
* Verify the decoded version for "all" and "none" selection.
* Remove double entry
* Add missing include
* Snapshot version 1.8 release 22 (snap4)
Update version to 1.8-snap5
* Fixes for test failures with --disable-tests --disable-tools options.
Don't test ph5diff if tests are disabled.
* Correct conditions for parallel builds with and without tests.
* Snapshot version 1.8 release 22 (snap5)
Update version to 1.8.22-snap6
* TRILAB-192 merging warnings changes from develop
* Autotools reconfigure update
* Restore page ejects.
* Restore page eject chars
* Fix orphaned token
* Update LT files
* Correct extra flags and merge TRILAB-24
* Update release note for CMake warnings
* H5repack bug fixes from develop
* TRILAB-192 - merge changes from develop
Single source, config files, for warnings for both autotools and CMake.
Update CMake libraries, tools, tests to use correct flags.
* Add missing m4 file
* Remove 128bit config check fo 1.8
* TRILAB-192 update LTparse files
* A fix in the cleaning up code for datatype when datatype initialization via H5D__init_type() fails.
The code to fix the problem is the same as what is done in H5D__open_oid().
* Add missing " and update function calls incorrectly
named load_gcc_arguments.
Commit changes to gnu-cxxflags to remove unmatched " and to gnu-fflags
to not add C warnings flags to H5_FCFLAGS.
* TRILAB-192 - cleanup edits and match CMake CXX to autotools
* Fix shadowed type
* TRILAB-192 correct fortran commands
* TRILAB-192 version of std=f2008 special check
* Fix shadow variable
* Add prefix_relto_examplesdir function to set relative path to h5c++.
* TRILAB-192 - parser files cannot handle this warning
* Parallel Fortran tests now use the MPI module instead of including
mpif.h.
* Don't add general warnings flags for unsupported old versions of gcc and
g++ (older than gcc/g++ 4.2).
Correct gnu-cxxflags to determine warnings flags to be added based on
C++ compiler version instead of C compiler version.
* Snapshot version 1.8 release 22 (snap6)
Update version to 1.8.22-snap7
* TRILAB-244 separate CXX warnings and errors from C
* Fix NoFilter build
* Move ADD_H5_FLAGS macro from *CompilerFlags.cmake files to
config/cmake_ext_mod/HDFMacros.cmake for common use.
* Restrict errors to gcc 4.8 and above.
* OESS-65 replace szip with aec szip
* Correct CMake version
* Correct -Werror=unused-variable
* Add -Werror= flags to lists displayed in libhdf5.settings.
* Fix -Werror=unused-variable
* More fixes for unused variable
* Resolve warning errors from -Werror= flags:
-Werror=bad-function-cast
-Werror=bad-function-cast
-Werror=implicit-function-declaration
-Werror=nested-externs
* Remove verbose assignments in smoke_check 3 and 5 functions.
* Update to use optimization flags, C++ error flags, and correct
libhdf5.settings.in to remove unworkable changes.
* Update config/gnu-cxxflags.
* Add missing headers
* Fix ifort warning flag.
Restore AC_DEFUN([PAC_PROG_FC_DEFAULT_REALisDBLE] in m4/aclocal_fc.m4.
Add --enable-symbols, --enable-profiling, and --enable-optimization
options to autotools configure; all configure flags for
--enable-production and --disable-production should match HDF5 1.10 and
1.12 production and debug default flags.
* Add github actions file
* Correct path
* OESS-65 Fix packaging
* Update reference name
* Correct filename
* disable pr action and enable fail fast
* Snapshot 1.8.22-snap7
Update version to 1.8.22-snap8.
* Correct mingw path
* Correct mingw paths
* Revise gnu-*flags and cmake/HDF*CompilerFlags.cmake files to add warning
flags for GCC compilers version 4.8 and above.
Removed files from gnu-warnings that only apply to versions < 4.8.
Consolidated warnings from versions < 4.8 that apply to versions >= 4.8
into the 4.8 warnings files.
* Update MANIFEST for removal of older warnings files.
* Yanked all MPI-1 calls
Added batch scripts in bin/batch.
* Snapshot 1.8.22-snap8.
Update version to 1.8.22-snap9.
* Squashed commit of the following:
commit 45b0cbc71929930a874e1c09e0770aa64d0ae697
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Thu Apr 23 13:14:56 2020 -0500
Add C++ warnings treated as error for autotools builds.
commit 6debcddcc766601799d5bd661bd60946f951a07e
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Fri Jun 19 16:50:03 2020 -0500
Remove tests for develop branch from testh5cc.sh.in.
Add @H5_ECXXFLAGS@ to AM_CXXFLAGS.
commit fed497e7f207313b2a133d3b68c942b7d7104b90
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Fri Jun 12 15:06:39 2020 -0500
Merge pull request #2646 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit '998c6470d78e14228695419c3b514c35ecf3d69e':
Remove unnecessary version conditions for Clang compilers.
commit 92e52ce5c211bd1d3991a3b8bb67287ac7b652aa
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Wed Jun 10 18:53:45 2020 -0500
Merge pull request #2639 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit 'a33667faf226f5d8c9633bf537893e8fce1bf1f6':
Add c++ to --enable-sanitize-checks option.
commit 2e802534fb997b81fa98fdd1c7d97d4310898e0d
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Wed Jun 10 15:18:36 2020 -0500
Merge pull request #2633 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit '20eab963899841c9a003baebead8e3bc07d9e127':
Remove duplicate entries in MANIFEST.
Make changes to CMake CompilerFlags.cmake files so extra flags are loaded for non-GNU compilers.
Update new clang files to not pick up clang as vendor for pgCC. Add new files to MANIFEST Temporary demotion of 2 -Werror warning flags that fail on macos 10.12 Remove Production flag unknown to Apple clang.
commit 96ef60a58a23847a7da89a891f2415055ec2ab60
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Mon Jun 8 16:24:49 2020 -0500
Merge pull request #2631 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit 'b942a4d8a3e27317cac50ce37ff5302d477664d8':
Clean up code to get clang version in config/linux-gnulibc1
commit 8a7c687da568e8b50b38fa53da1ca63759be6ec4
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Mon Jun 8 11:42:37 2020 -0500
Merge pull request #2623 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit 'c7626f79fdee4eee13925e240ef41e61f3367eab':
Add flags from config/clang-warnings/*general files to H5 C and CXX flags for all versions of Clang and Clang++ compilers. Switched from cut to awk in testcheck_version.sh.in to avoid dependence on tab vs. " " in version definitions in H5public.h.
Add files for adding warning flags for clang compilers in autotools configure.
commit db3ef7ff3c1ed79167cecef831501411cff8291f
Merge: 5a0f8d7 f9f1310
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Fri Jun 19 14:46:22 2020 -0500
Merge branch 'hdf5_1_12' of https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into hdf5_1_12
commit 5a0f8d7940ae57b445f545a0abd7e303ce6924ee
Author: Larry Knox <lrknox@hdfgroup.org>
Date: Wed Jun 10 20:15:41 2020 -0500
Merge pull request #2636 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:HDFFV-11000-update-testh5cc.sh.in-for-version to develop
* commit '5c0bd670d6e9919c463fbc05de99e2ba55b0761e':
Add tests for all version to H5_NO_DEPRECATED_SYMBOLS section and to section for current version, with and without default API version flags.
HDFFV-11000: update-testh5cc.sh.in to test sample versioned functions in HDF5 1.10, 1.12 and develop.
* Update configure and Makefile.ins after bin/reconfigure.
* Fix MANIFEST
* Fix HDFFV-10591
Description:
h52gif produced a segfault when a buffer overflow occurred because
the data size was corrupted and became very large. This commit added
a check on the data size against the buffer size to prevent the segfault.
It also added error reporting to h52gif to display an error message
instead of silently exiting when the failure occurred.
Platforms tested:
Linux/64 (jelly)
* Snapshot 1.8.22-snap9. Update version to 1.8.22-snap10.
* Merge pull request #2686 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit '800f93f7c994f88dfa716746153ded4b1e690e3a':
Remove path to szip header file from AM_CPPFLAGS when configure check of libsz fails. Fix for HDFFV-10830.
* Regenerate configure.
* Merge from 1.10-1.12-dev - LT parse needs update
* Incorporate pull request #2693 from develop for the fix to HDFFV-11080:
(1) Patch up the file pointer when reading attribute of variable length datatype
(2) Test to verify the fix when doing multiple threads
(3) Update MANIFEST
(4) Add new test to Cmake
* Switch bison and flex update of LT files from bin/genltanalyse to
bin/genparser, and from automatically updating the LT files whenever
reconfigure is run to running only on man<F12>ual command.
* Update hl/sr/H5LT files.
Add bin/genparser to MANIFEST; remove bin/genltanalyze.
* Fix to the merge of PR #2708 for HDFFV-11080 to the 1.8 branch.
Need to checkin test/Makefile.in for the new file added.
* Fix HDFFV-11120 and HDFFV-11121 (CVE-2018-13870 and CVE-2018-13869)
Description:
When a buffer overflow occurred because a name length was corrupted
and became very large, h5dump produced a segfault on one file and a
memcpy parameter overlap on another file. This commit added checks
that detect a read pass the end of the buffer to prevent these error
conditions.
Platforms tested:
Linux/64 (jelly)
* Fixed typo
* Check for header szlib.h only when libsz passes AC_CHECK_LIB, so that
H5_HAVE_SALIB_H is not defined when szip is not enabled, to prevent
compile failures for incompatible szlib.
* HDFFV-11127 - force RTLD_LOCAL in dlopen
* spelling
* Remove extra parens
* Remove unnecessary assignment freom configure.ac.
* Add hypen to subrelease regex
* Add special case when H5_VERS_SUBRELEASE is 0
* Revert H5_VERS_SUBRELEASE check
* The version string has a second use for packaging
* MinGW uses "MinGW Makefiles"
* Snapshot 1.8.22-snap10. Update version to 1.8.22-snap11.
* Merge clang-format changes from develop
* remove stray file
* Source formatted
* Add options to github actions.
* Add back file, remove py file
* HDFFV-11096 Correct h5dump usage text
* Update formating
* remove autogen for 1.8 branch
* Fix comment whitespace
* Change '==' to 'eq' in test script
* Merge from develop
github updates
bin scripts
parser updates
* Snapshot 1.8.22-snap11. Update version to 1.8.22-snap12.
* Merge from 1.10
Comments, whitespace
Simple init and if block brackets.
Minimal code changes limited to return value and spelling
* Update autotools files
* Update FD source
* More merges from 1.10 comments and inits
* Comment fixes
* Fix macro argument
* Remove autogen file and cache dir
* Revert autotools files to previous version
* Correct boolean value and missing define
* URL and options corrections
* revert autoconf files
* Fix compile issues with vfd drivers.
* Fix HDFS test
* Remove extra #endif
* Move init above execution
* Multiple changes to bring branch up-to-date (#87)
Correct TARGET variable and CMake config file location.
Add option to allow filter plugins to be built inline.
Update CMake tools macros.
* hdf5 1 8 release text (#113)
* Multiple changes to bring branch up-to-date
Correct TARGET variable and CMake config file location.
Add option to allow filter plugins to be built inline.
Update CMake tools macros.
* release text updates - mostly whitespace
* Fixed HDFFV-10480 and HDFFV-11159 (#145)
* Fixed HDFFV-10480 and HDFFV-11159
Description
Checked against buffer size to prevent segfault, in case of data corruption.
+ HDFFV-11159 CVE-2018-14033 Buffer over-read in H5O_layout_decode
+ HDFFV-10480 CVE-2018-11206 Buffer over-read in H5O_fill_new[/old]_decode and
A user's patch was applied to this previously, but it is redone
for a more correct fix, that is the check now accounted for the
previous advance of the buffer pointer.
Platforms tested:
Linux/64 (jelly)
* Fixed typo
* Update HDF5 1.8 copyright headers with updated copyright URL (#148)
* Update URL for COPYING file in copyright headers.
* Make fortran copyright headers uniformly spaced.
* Update url for Copyright file in c++/src/footer.html.
* OESS-98 Update plugin build option (#171)
* 1.8 has extra fortran CMake option (#176)
* 1.8 has extra fortran CMake option
* Update license URL
* OESS-98 fix tools test for plugins (#180)
* Hdf5 1 8 (#169)
* Fixed HDFFV-10480 and HDFFV-11159
Description
Checked against buffer size to prevent segfault, in case of data corruption.
+ HDFFV-11159 CVE-2018-14033 Buffer over-read in H5O_layout_decode
+ HDFFV-10480 CVE-2018-11206 Buffer over-read in H5O_fill_new[/old]_decode and
A user's patch was applied to this previously, but it is redone
for a more correct fix, that is the check now accounted for the
previous advance of the buffer pointer.
Platforms tested:
Linux/64 (jelly)
* Fixed typo
* Fixed HDFFV-11150
Description
Replaced an HDassert with a check for null pointer in H5O_dec_rc() to
catch null pointer in corrupted data situation.
Reversed the fix in svn-r24463 in which a check for null pointer prior
to calling H5O_dec_rc()
Platforms tested:
Linux/64 (jelly)
* HDF5 1 8 fix fortran build on macs (#186)
* Correct fortran and shared libs option
* Fix for no shared fortran build
* OESS-98 fix hdf5 link target (#191)
* Partial changes to RELEASE.txt for release. (#185)
* Partial changes to RELEASE.txt for release.
* Update supported and tested platforms.
* Update version to 1.8.22-12.
* close #195. (#196)
* Update HDF5PluginMacros.cmake
* Update HDF5PluginMacros.cmake
* Update directory for SZ filter in HDF5PluginMacros.cmake.
Updates for release:
Switch configure default to production mode.
Set HDF5_GENERATE_HEADERS to OFF.
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Restores maintainer mode in the autotools (#200) (#203)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
* Hdf5 1 8 22 (#212)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Brings ttsafe_attr_vlen.c changes from develop (#214)
Fixes exposed pthread problem on Windows.
* Update SO numbers for Hdf5 1 8 22 (#215)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Hdf5 1 8 22 (#224)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
* Update CMake/HDF5Examples version in bin/release
* Update CMake/HDF5Examples version number in bin/release (#225)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
* Fixed typo in an error message. (#228)
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* Bring 3 small changes from Hdf5 1.8 to 1.8.22 (#241)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
* Stat st blocks fix 1822 (#251)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* Fixes Autotools detection of the st_blocks field in stat (#246)
* Fixes Autotools detection of the st_blocks field in stat
The Autotools and CMake will now both correctly determine if the
stat struct has the st_blocks field and set H5_HAVE_STAT_ST_BLOCKS
appropriately.
* Fixes a typo in configure.ac
* Restore lines in RELEASE.txt.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
* Stat st blocks fix 1822 (#256)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* Fixes Autotools detection of the st_blocks field in stat (#246)
* Fixes Autotools detection of the st_blocks field in stat
The Autotools and CMake will now both correctly determine if the
stat struct has the st_blocks field and set H5_HAVE_STAT_ST_BLOCKS
appropriately.
* Fixes a typo in configure.ac
* Restore lines in RELEASE.txt.
* Updated configure with reconfigure.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
* RELEASE.txt cleanup.
* Hdf5 1 8 22 (#261)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* RELEASE.txt cleanup.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.
* )Update version.
* Hdf5 1 8 22 (#266)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* RELEASE.txt cleanup.
* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.
* )Update version.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
* Reverts lock/unlock callback signature to 1.8.21 version (#254)
* Reverts lock/unlock callback signature to 1.8.21 version
This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs
that have the lock callback implemented and that is just as no-op stubs.
These stubs were removed so the callbacks are now NULL pointers, like
the other VFDs in 1.8.
* Trivial whitespace fix
* Update version to 1.8.22-14.
* Hdf5 1 8 22 - Reverts lock/unlock callback signature to 1.8.21 version (#267)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* RELEASE.txt cleanup.
* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.
* )Update version.
* Reverts lock/unlock callback signature to 1.8.21 version (#254)
* Reverts lock/unlock callback signature to 1.8.21 version
This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs
that have the lock callback implemented and that is just as no-op stubs.
These stubs were removed so the callbacks are now NULL pointers, like
the other VFDs in 1.8.
* Trivial whitespace fix
* Update version to 1.8.22-14.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
* Update version in H5public.h
* Hdf5 1 8 22 (#269)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* RELEASE.txt cleanup.
* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.
* )Update version.
* Reverts lock/unlock callback signature to 1.8.21 version (#254)
* Reverts lock/unlock callback signature to 1.8.21 version
This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs
that have the lock callback implemented and that is just as no-op stubs.
These stubs were removed so the callbacks are now NULL pointers, like
the other VFDs in 1.8.
* Trivial whitespace fix
* Update version to 1.8.22-14.
* Update version in H5public.h
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
* Set version 1.8.22 for release.
* dd RELEASE.txt entry for HDFFV-10741.
* Hdf5 1 8 22 (#279)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* RELEASE.txt cleanup.
* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.
* )Update version.
* Reverts lock/unlock callback signature to 1.8.21 version (#254)
* Reverts lock/unlock callback signature to 1.8.21 version
This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs
that have the lock callback implemented and that is just as no-op stubs.
These stubs were removed so the callbacks are now NULL pointers, like
the other VFDs in 1.8.
* Trivial whitespace fix
* Update version to 1.8.22-14.
* Update version in H5public.h
* Set version 1.8.22 for release.
* dd RELEASE.txt entry for HDFFV-10741.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
* Improve performance of multiple calls to H5Sget_select_elem_pointlist (#270) (#277)
* Cache the pointer to the next point to process after the last call to
H5S__get_select_elem_pointlist. This allows the normal process of
iterating over the points in batches to be much more efficient, as the
library does not need to traverse the entirety of the preceding points
every time the funciton is re-entered.
* Update RELEASE.txt for point selection iteration performance fix.
* Hdf5 1 8 22 (#281)
* Restores maintainer mode in the autotools (#200)
Maintainer mode should be enabled in development branches.
Also adds helpful commenting.
Add bin/switch_maint_mode
Disable maintainer mode for release.
Fix incomplete merge for stub functions in H5Fdhdfs.c
* Update configure for Restores maintainer mode in the autotools (#200).
* Update MANIFEST for switch_maint_mode script.
* Update so numbers for 1.8.22 release.
* Add so numbers changes in Makefile.ins for 1.8.22 release.
* Update pkgconfig settings with version - #218 (#223)
* Add notice of final HDFF5 1.8 release.
Add solaris 64bit alignment issue to "Known Problems".
* Update 1.8 final release notice.
* Update CMake/HDF5Examples version in bin/release
* Fixed typo in an error message. (#227)
* Remove duplicate setting (#239)
* RELEASE.txt cleanup.
* Add macOS Big Sur to tested machines, also missing entries for macOS 10.13 and 10.14.
* )Update version.
* Reverts lock/unlock callback signature to 1.8.21 version (#254)
* Reverts lock/unlock callback signature to 1.8.21 version
This callback is unused in 1.8. The ros3 and hdfs VFDs are the only VFDs
that have the lock callback implemented and that is just as no-op stubs.
These stubs were removed so the callbacks are now NULL pointers, like
the other VFDs in 1.8.
* Trivial whitespace fix
* Update version to 1.8.22-14.
* Update version in H5public.h
* Set version 1.8.22 for release.
* dd RELEASE.txt entry for HDFFV-10741.
* Improve performance of multiple calls to H5Sget_select_elem_pointlist (#270) (#277)
* Cache the pointer to the next point to process after the last call to
H5S__get_select_elem_pointlist. This allows the normal process of
iterating over the points in batches to be much more efficient, as the
library does not need to traverse the entirety of the preceding points
every time the funciton is re-entered.
* Update RELEASE.txt for point selection iteration performance fix.
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
Co-authored-by: Neil Fortner <nfortne2@hdfgroup.org>
* Hdf5 1 8 22 (#284)
* Fixed typo in an error message.
* Updated for HDFFV-11150, HDFFV-10480, and HDFFV-11159
* Update "Support for New Platforms and Compilers" section in RELEASE.txt;
add check_version workaround for binary compatibility to "Known
Problems".
* Add SUSE Linux to tested platforms.
* Update numbers in config/lt_vers.am and run bin/reconfigure for so
numbers.
* Update version in 3 files missed by merge.
Co-authored-by: Allen Byrne <byrn@hdfgroup.org>
Co-authored-by: Vailin Choi <vchoi@hdfgroup.org>
Co-authored-by: vchoi <vchoi@jelly.ad.hdfgroup.org>
Co-authored-by: hdftest <hdftest@hdfgroup.org>
Co-authored-by: Jordan Henderson <jhenderson@hdfgroup.org>
Co-authored-by: Dana Robinson <derobins@hdfgroup.org>
Co-authored-by: Binh-Minh Ribler <bmribler@hdfgroup.org>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org>
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Neil Fortner <nfortne2@hdfgroup.org>
Diffstat (limited to 'configure')
| -rwxr-xr-x | configure | 1504 |
1 files changed, 1245 insertions, 259 deletions
@@ -1,7 +1,7 @@ #! /bin/sh # From configure.ac Id. # Guess values for system-dependent variables and create Makefiles. -# Generated by GNU Autoconf 2.69 for HDF5 1.8.21. +# Generated by GNU Autoconf 2.69 for HDF5 1.8.22. # # Report bugs to <help@hdfgroup.org>. # @@ -591,8 +591,8 @@ MAKEFLAGS= # Identity of this package. PACKAGE_NAME='HDF5' PACKAGE_TARNAME='hdf5' -PACKAGE_VERSION='1.8.21' -PACKAGE_STRING='HDF5 1.8.21' +PACKAGE_VERSION='1.8.22' +PACKAGE_STRING='HDF5 1.8.22' PACKAGE_BUGREPORT='help@hdfgroup.org' PACKAGE_URL='' @@ -642,6 +642,12 @@ HAVE_SHARED_CONDITIONAL_FALSE HAVE_SHARED_CONDITIONAL_TRUE fortran_linux_linker_option SEARCH +BUILD_TOOLS_CONDITIONAL_FALSE +BUILD_TOOLS_CONDITIONAL_TRUE +BUILD_TESTS_PARALLEL_CONDITIONAL_FALSE +BUILD_TESTS_PARALLEL_CONDITIONAL_TRUE +BUILD_TESTS_CONDITIONAL_FALSE +BUILD_TESTS_CONDITIONAL_TRUE BUILD_HDF5_HL_CONDITIONAL_FALSE BUILD_HDF5_HL_CONDITIONAL_TRUE BUILD_FORTRAN_CONDITIONAL_FALSE @@ -665,6 +671,12 @@ CONFIG_MODE CONFIG_USER CONFIG_DATE H5_VERSION +examplesdir +JNI_LDFLAGS +HAVE_LIBHDFS +ROS3_VFD_CONDITIONAL_FALSE +ROS3_VFD_CONDITIONAL_TRUE +ROS3_VFD DIRECT_VFD_CONDITIONAL_FALSE DIRECT_VFD_CONDITIONAL_TRUE ADD_PARALLEL_FILES @@ -673,6 +685,10 @@ CLEARFILEBUF INSTRUMENT_LIBRARY TRACE_API DEBUG_PKG +OPTIMIZATION +PROFILING +DEV_WARNINGS +SYMBOLS HAVE_PTHREAD BUILD_SHARED_SZIP_CONDITIONAL_FALSE BUILD_SHARED_SZIP_CONDITIONAL_TRUE @@ -708,6 +724,8 @@ EGREP GREP SED LIBTOOL +HDF5_TOOLS +HDF5_TESTS FORTRAN_SHARED_CONDITIONAL_FALSE FORTRAN_SHARED_CONDITIONAL_TRUE H5_FORTRAN_SHARED @@ -771,6 +789,7 @@ ac_ct_CC LDFLAGS CFLAGS CC +CLANG_SANITIZE_CHECKS UNAME_INFO enable_static enable_shared @@ -796,9 +815,11 @@ AM_CXXFLAGS AM_FCFLAGS AM_CFLAGS H5_LDFLAGS +H5_ECXXFLAGS H5_CXXFLAGS H5_FCFLAGS H5_CPPFLAGS +H5_ECFLAGS H5_CFLAGS CPPFLAGS host_os @@ -882,12 +903,15 @@ ac_user_opts=' enable_option_checking enable_silent_rules enable_maintainer_mode +enable_sanitize_checks enable_dependency_tracking enable_unsupported enable_fortran enable_fortran2003 enable_cxx enable_hl +enable_tests +enable_tools enable_shared enable_static with_pic @@ -905,6 +929,10 @@ with_zlib with_szlib enable_threadsafe with_pthread +enable_symbols +enable_developer_warnings +enable_profiling +enable_optimization enable_debug enable_codestack enable_metadata_trace_file @@ -915,6 +943,9 @@ enable_using_memchecker enable_parallel with_mpe enable_direct_vfd +enable_ros3_vfd +with_libhdfs +with_examplesdir with_default_plugindir enable_dconv_exception enable_dconv_accuracy @@ -1480,7 +1511,7 @@ if test "$ac_init_help" = "long"; then # Omit some internal or obsolete options to make the list less imposing. # This message is too long to be a string in the A/UX 3.1 sh. cat <<_ACEOF -\`configure' configures HDF5 1.8.21 to adapt to many kinds of systems. +\`configure' configures HDF5 1.8.22 to adapt to many kinds of systems. Usage: $0 [OPTION]... [VAR=VALUE]... @@ -1550,7 +1581,7 @@ fi if test -n "$ac_init_help"; then case $ac_init_help in - short | recursive ) echo "Configuration of HDF5 1.8.21:";; + short | recursive ) echo "Configuration of HDF5 1.8.22:";; esac cat <<\_ACEOF @@ -1563,6 +1594,12 @@ Optional Features: --enable-maintainer-mode enable make rules and dependencies not useful (and sometimes confusing) to the casual installer + --enable-sanitize-checks=address + (clang/clang++ compilers only) Enable sanitize + checks. Address is useful for detecting issues + dealing with memory. See AddressSanitizer in + config/sanitizer/README.md for more information. + [default=none] --enable-dependency-tracking do not reject slow dependency extractors --disable-dependency-tracking @@ -1573,6 +1610,8 @@ Optional Features: specify --enable-fortran [default=no] --enable-cxx Compile the C++ interface [default=no] --enable-hl Enable the high level library [default=yes] + --enable-tests Compile the HDF5 tests [default=yes] + --enable-tools Compile the HDF5 tools [default=yes] --enable-shared[=PKGS] build shared libraries [default=yes] --enable-static[=PKGS] build static libraries [default=yes] --enable-fast-install[=PKGS] @@ -1586,6 +1625,38 @@ Optional Features: --enable-threadsafe Enable thread-safe capability. Not compatible with the high-level library, Fortran, or C++ wrappers. [default=no] + --enable-symbols=(yes|no|<custom>) + Add debug symbols to the library (e.g.: build with + -g). This is independent of the build mode and + optimization level. The custom string allows special + settings like -ggdb, etc. to be used. [default=yes + if debug build, otherwise no] + --enable-developer-warnings + Determines whether developer warnings will be + emitted. These are usually performance suggestions + (e.g. -Wsuggest-attribute) and do not flag poor code + quality. [default=no] + --enable-profiling=(yes|no|<custom>) + Enable profiling flags (e.g.: -pg). This can be set + independently from the build mode. The custom + setting can be used to pass alternative profiling + flags (e.g.: -P for using Prof with gcc). + [default=no] + --enable-optimization=(high|debug|none|<custom>) + Enable optimization flags/settings (e.g.: -O3). This + can be set independently from the build mode. + Optimizations for a given compiler can be specified + at several levels: High, with aggressive + optimizations turned on; debug, with optimizations + that are unlikely to interfere with debugging or + profiling; and none, with no optimizations at all. + See the compiler-specific config/*-flags file for + more details. Alternatively, optimization options + can be specified directly by specifying them as a + string value. These custom optimzation flags will + completely replace all other optimization flags. + [default depends on build mode: debug=debug, + production=high, clean=none] --enable-debug=all Turn on debugging in all packages. One may also specify a comma-separated list of package names without the leading H5 or the word no. The default @@ -1606,12 +1677,14 @@ Optional Features: Enable this option if a memory allocation and/or bounds checking tool will be used on the HDF5 library. Enabling this causes the library to be more - picky about it's memory operations and also disables - the library's free space manager code. Default=no. + picky about its memory operations and also disables + the library's free space manager code. [default=no] --enable-parallel Search for MPI-IO and MPI support files --enable-direct-vfd Build the direct I/O virtual file driver (VFD). This is based on the POSIX (sec2) VFD and requires the open() call to take the O_DIRECT flag. [default=no] + --enable-ros3-vfd Build the Read-Only S3 virtual file driver (VFD). + [default=no] --enable-dconv-exception if exception handling functions is checked during data conversions [default=yes] @@ -1655,6 +1728,11 @@ Optional Packages: --with-pthread=DIR Specify alternative path to Pthreads library when thread-safe capability is built --with-mpe=DIR Use MPE instrumentation [default=no] + --with-libhdfs=DIR Provide libhdfs library to enable HDFS virtual file + driver (VFD) [default=no] + --with-examplesdir=location + Specify path for examples + [default="DATAROOTDIR/hdf5_examples"] --with-default-plugindir=location Specify default location for plugins [default="/usr/local/hdf5/lib/plugin"] @@ -1745,7 +1823,7 @@ fi test -n "$ac_init_help" && exit $ac_status if $ac_init_version; then cat <<\_ACEOF -HDF5 configure 1.8.21 +HDF5 configure 1.8.22 generated by GNU Autoconf 2.69 Copyright (C) 2012 Free Software Foundation, Inc. @@ -2682,7 +2760,7 @@ cat >config.log <<_ACEOF This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. -It was created by HDF5 $as_me 1.8.21, which was +It was created by HDF5 $as_me 1.8.22, which was generated by GNU Autoconf 2.69. Invocation command line was $ $0 $@ @@ -3553,7 +3631,7 @@ fi # Define the identity of the package. PACKAGE='hdf5' - VERSION='1.8.21' + VERSION='1.8.22' cat >>confdefs.h <<_ACEOF @@ -3686,16 +3764,45 @@ fi AM_BACKSLASH='\' -## AM_MAINTAINER_MODE turns off "rebuild rules" that contain dependencies -## for Makefiles, configure, src/H5config.h, etc. If AM_MAINTAINER_MODE -## is *not* included here, these files will be rebuilt if out of date. -## This is a problem because if users try to build on a machine with -## the wrong versions of autoconf and automake, these files will be -## rebuilt with the wrong versions and bad things can happen. -## Also, CVS doesn't preserve dependencies between timestamps, so -## Makefiles will often think rebuilding needs to occur when it doesn't. -## Developers should './configure --enable-maintainer-mode' to turn on -## rebuild rules. +## AM_MAINTAINER_MODE determines the behavior of "rebuild rules" that contain +## dependencies for Makefile.in files, configure, src/H5config.h, etc. If +## AM_MAINTAINER_MODE is enabled, these files will be rebuilt if out of date. +## When disabled, the autotools build files can get out of sync and the build +## system will not complain or try to regenerate downstream files. +## +## The AM_MAINTAINER_MODE macro also determines whether the +## --(enable|disable)-maintainer-mode configure option is available. When the +## macro is present, with or without a parameter, the option will be added +## to the generated configure script. +## +## In summary: +## +## AM_MAINTAINER_MODE([enable]) +## - Build dependencies ON by default +## - Configure option exists +## +## AM_MAINTAINER_MODE([disable]) +## - Build dependencies OFF by default +## - Configure option exists +## +## AM_MAINTAINER_MODE +## - Build dependencies OFF by default +## - Configure option exists +## +## No AM_MAINTAINER_MODE macro +## - Build dependencies ON by default +## - No configure option to control build dependencies +## +## The biggest concern for us is that version control systems like git +## usually don't preserve dependencies between timestamps, so the build +## system will often think that upstream build files like Makefile.am are +## dirty and that rebuilding needs to occur when it doesn't. This is a problem +## in release branches where we provide the autotools-generated files. Users +## who don't have autoconf, automake, etc. will then have difficulty building +## release branches checked out from git. +## +## By default, maintainer mode is enabled in development branches and disabled +## in release branches. { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether to enable maintainer-specific portions of Makefiles" >&5 $as_echo_n "checking whether to enable maintainer-specific portions of Makefiles... " >&6; } @@ -3826,6 +3933,11 @@ case $host_os in *\ *) host_os=`echo "$host_os" | sed 's/ /-/g'`;; esac ## H5_CFLAGS (and company) are for CFLAGS that should be used on HDF5, but ## not exported to h5cc (or h5fc, etc.) +## +## H5_ECFLAGS (and company) are for warnings that should be treated as errors. +## + + @@ -3970,13 +4082,13 @@ fi ## turning on debug or profiling flags for the compiler. The search order ## is: ## -## CPU-VENDOR-OS -## VENDOR-OS -## CPU-OS -## CPU-VENDOR -## OS -## VENDOR -## CPU +## CPU-VENDOR-OS +## VENDOR-OS +## CPU-OS +## CPU-VENDOR +## OS +## VENDOR +## CPU ## ## If the `OS' ends with a version number then remove it. For instance, ## `freebsd3.1' would become `freebsd' @@ -3988,6 +4100,9 @@ case $host_os in freebsd*) host_os_novers=freebsd ;; + netbsd*) + host_os_novers=netbsd + ;; solaris*) host_os_novers=solaris ;; @@ -4043,6 +4158,61 @@ $as_echo "no" >&6; } test "$hname_tmp" = "$hname" && break done +## +## Enable/disable sanitizer checks for clang compilers, initially address sanitizer +## +{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for clang sanitizer checks" >&5 +$as_echo_n "checking for clang sanitizer checks... " >&6; } +# Check whether --enable-sanitize-checks was given. +if test "${enable_sanitize_checks+set}" = set; then : + enableval=$enable_sanitize_checks; CLANG_SANITIZE_CHECKS=$enableval +fi + + +# Set default +if test "X-$CLANG_SANITIZE_CHECKS" = X- ; then + CLANG_SANITIZE_CHECKS=none +fi + +if test "X$CC_BASENAME" = "Xclang"; then + + + # There are several sanitizer tools. At present we are testing + # and describing only -fsanitizer=address with autotools. + case "X-$CLANG_SANITIZE_CHECKS" in + X-no|X-none) + CLANG_SANITIZE_CHECKS=none + CLANG_SANITIZE_LIST= + ;; + *) + CLANG_SANITIZE_LIST=$CLANG_SANITIZE_CHECKS + ;; + esac + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CLANG_SANITIZE_CHECKS" >&5 +$as_echo "$CLANG_SANITIZE_CHECKS" >&6; } + + # Other tools can be added to the list of checks + # The clang compiler doesn't support some of them; they should be + # checked before adding them to the list in the help message. + # The sanitizers/sanitizers.cmake file lists these options: + # address, memory, memoryWithOrigins, undefined, thread, leak, + # 'address;undefined'. Which and which combinations of these are + # supported varies by compiler version, but unsupported options + # or combinations will result in configure errors reported in config.log. + # Comma separated lists of sanitize options wil be entered intact in + # one -fsanitize=<list> flag. Space separated lists will be entered in + # separate -fsanitize=<item> flags. + # NOTE: No sanity checking done here! + if test -n "$CLANG_SANITIZE_LIST"; then + H5_CFLAGS="$H5_CFLAGS -fno-omit-frame-pointer" + H5_CXXFLAGS="$H5_CXXFLAGS -fno-omit-frame-pointer" + for sanitizer in `echo $CLANG_SANITIZE_LIST`; do + H5_CFLAGS="$H5_CFLAGS -fsanitize=${sanitizer}" + H5_CXXFLAGS="$H5_CXXFLAGS -fsanitize=${sanitizer}" + done + fi +fi + ## ---------------------------------------------------------------------- ## Some built-in configure checks can only see CFLAGS (not AM_CFLAGS), so ## we need to add this in so configure works as intended. We will need to @@ -6473,12 +6643,9 @@ ac_compiler_gnu=$ac_cv_fc_compiler_gnu HAVE_SIZEOF_FORTRAN="no" { $as_echo "$as_me:${as_lineno-$LINENO}: checking if Fortran compiler supports intrinsic SIZEOF" >&5 $as_echo_n "checking if Fortran compiler supports intrinsic SIZEOF... " >&6; } + TEST_SRC="`sed -n '/PROGRAM PROG_FC_SIZEOF/,/END PROGRAM PROG_FC_SIZEOF/p' $srcdir/m4/aclocal_fc.f90`" cat > conftest.$ac_ext <<_ACEOF - - PROGRAM main - i = sizeof(x) - END PROGRAM - +$TEST_SRC _ACEOF if ac_fn_fc_try_link "$LINENO"; then : { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 @@ -6497,15 +6664,9 @@ rm -f core conftest.err conftest.$ac_objext \ HAVE_C_SIZEOF_FORTRAN="no" { $as_echo "$as_me:${as_lineno-$LINENO}: checking if Fortran compiler supports intrinsic C_SIZEOF" >&5 $as_echo_n "checking if Fortran compiler supports intrinsic C_SIZEOF... " >&6; } + TEST_SRC="`sed -n '/PROGRAM PROG_FC_C_SIZEOF/,/END PROGRAM PROG_FC_C_SIZEOF/p' $srcdir/m4/aclocal_fc.f90`" cat > conftest.$ac_ext <<_ACEOF - - PROGRAM main - USE ISO_C_BINDING - INTEGER(C_INT) :: a - INTEGER(C_SIZE_T) :: result - result = C_SIZEOF(a) - END PROGRAM - +$TEST_SRC _ACEOF if ac_fn_fc_try_link "$LINENO"; then : { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 @@ -6524,14 +6685,9 @@ rm -f core conftest.err conftest.$ac_objext \ HAVE_STORAGE_SIZE_FORTRAN="no" { $as_echo "$as_me:${as_lineno-$LINENO}: checking if Fortran compiler supports intrinsic STORAGE_SIZE" >&5 $as_echo_n "checking if Fortran compiler supports intrinsic STORAGE_SIZE... " >&6; } + TEST_SRC="`sed -ne '/PROGRAM PROG_FC_STORAGE_SIZE/,/END PROGRAM PROG_FC_STORAGE_SIZE/p' $srcdir/m4/aclocal_fc.f90`" cat > conftest.$ac_ext <<_ACEOF - - PROGRAM main - INTEGER :: a - INTEGER :: result - result = STORAGE_SIZE(a) - END PROGRAM - +$TEST_SRC _ACEOF if ac_fn_fc_try_link "$LINENO"; then : { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 @@ -6593,35 +6749,22 @@ rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext ## Checking if the compiler supports the required Fortran 2003 features and ## disable Fortran 2003 if it does not. + HAVE_F2003_REQUIREMENTS="no" { $as_echo "$as_me:${as_lineno-$LINENO}: checking if Fortran compiler version compatible with Fortran 2003 HDF" >&5 $as_echo_n "checking if Fortran compiler version compatible with Fortran 2003 HDF... " >&6; } - HAVE_FORTRAN_2003="no" - HAVE_F2003_REQUIREMENTS="no" - cat > conftest.$ac_ext <<_ACEOF - program main - - - USE iso_c_binding - IMPLICIT NONE - TYPE(C_PTR) :: ptr - TYPE(C_FUNPTR) :: funptr - CHARACTER(LEN=80, KIND=c_char), TARGET :: ichr - - ptr = C_LOC(ichr(1:1)) - - - end + TEST_SRC="`sed -n '/PROG_FC_HAVE_F2003_REQUIREMENTS/,/END PROGRAM PROG_FC_HAVE_F2003_REQUIREMENTS/p' $srcdir/m4/aclocal_fc.f90`" + cat > conftest.$ac_ext <<_ACEOF +$TEST_SRC _ACEOF -if ac_fn_fc_try_link "$LINENO"; then : +if ac_fn_fc_try_compile "$LINENO"; then : { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 $as_echo "yes" >&6; } - HAVE_F2003_REQUIREMENTS=yes + HAVE_F2003_REQUIREMENTS="yes" else { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } fi -rm -f core conftest.err conftest.$ac_objext \ - conftest$ac_exeext conftest.$ac_ext +rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext if test "X$HAVE_F2003_REQUIREMENTS" = "Xno"; then @@ -6689,7 +6832,7 @@ fi ## We need to check for a C++ compiler unconditionally, since ## AC_PROG_CXX defines some macros that Automake 1.9.x uses and will ## miss even if c++ is not enabled. - ac_ext=cpp +ac_ext=cpp ac_cpp='$CXXCPP $CPPFLAGS' ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5' ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5' @@ -7106,7 +7249,7 @@ else fi - ac_ext=cpp +ac_ext=cpp ac_cpp='$CXXCPP $CPPFLAGS' ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5' ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5' @@ -7238,7 +7381,7 @@ ac_cpp='$CPP $CPPFLAGS' ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5' ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5' ac_compiler_gnu=$ac_cv_c_compiler_gnu - ## this is checked for when AC_HEADER_STDC is done + ## this is checked for when AC_HEADER_STDC is done { $as_echo "$as_me:${as_lineno-$LINENO}: checking if c++ interface enabled" >&5 $as_echo_n "checking if c++ interface enabled... " >&6; } @@ -7253,6 +7396,9 @@ if test "X$HDF_CXX" = "Xyes"; then echo "yes" HDF5_INTERFACES="$HDF5_INTERFACES c++" + ## Expose the compiler for *.in files + + ## Change to the C++ language ac_ext=cpp ac_cpp='$CXXCPP $CPPFLAGS' @@ -7261,18 +7407,16 @@ ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ex ac_compiler_gnu=$ac_cv_cxx_compiler_gnu - # Checking if C++ needs old style header files in includes + ## Checking if C++ needs old style header files in includes { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX needs old style header files in includes" >&5 $as_echo_n "checking if $CXX needs old style header files in includes... " >&6; } + TEST_SRC="`(echo \"#define OLD_HEADER_FILENAME 1\"; cat $srcdir/config/cmake_ext_mod/HDFCXXTests.cpp)`" + cat confdefs.h - <<_ACEOF >conftest.$ac_ext /* end confdefs.h. */ - -#include <iostream> - -int main(void) { return 0; } - +$TEST_SRC _ACEOF if ac_fn_cxx_try_link "$LINENO"; then : { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 @@ -7287,23 +7431,15 @@ rm -f core conftest.err conftest.$ac_objext \ conftest$ac_exeext conftest.$ac_ext - # Checking if C++ can handle namespaces + ## Checking if C++ can handle namespaces { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX can handle namespaces" >&5 $as_echo_n "checking if $CXX can handle namespaces... " >&6; } + TEST_SRC="`(echo \"#define HDF_NO_NAMESPACE 1\"; cat $srcdir/config/cmake_ext_mod/HDFCXXTests.cpp)`" + cat confdefs.h - <<_ACEOF >conftest.$ac_ext /* end confdefs.h. */ - -namespace H5 { -int fnord; -} - -int main(void) { - using namespace H5; - fnord = 37; - return 0; -} - +$TEST_SRC _ACEOF if ac_fn_cxx_try_link "$LINENO"; then : { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 @@ -7311,88 +7447,57 @@ $as_echo "yes" >&6; } else { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } - CXXFLAGS="${CXXFLAGS} -DH5_NO_NAMESPACE" - AM_CXXFLAGS="${AM_CXXFLAGS} -DH5_NO_NAMESPACE" + CXXFLAGS="${CXXFLAGS} -DHDF_NO_NAMESPACE" + AM_CXXFLAGS="${AM_CXXFLAGS} -DHDF_NO_NAMESPACE" fi rm -f core conftest.err conftest.$ac_objext \ conftest$ac_exeext conftest.$ac_ext - # Checking if C++ has offsetof extension + ## if C++ can handle static cast - { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX has offsetof extension" >&5 -$as_echo_n "checking if $CXX has offsetof extension... " >&6; } - cat confdefs.h - <<_ACEOF >conftest.$ac_ext -/* end confdefs.h. */ - - #include <stdio.h> - #include <stddef.h> - -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus - extern "C" -# endif - int FC_DUMMY_MAIN() { return 1; } -#endif -#endif -int -main () -{ - - struct index_st - { - unsigned char type; - unsigned char num; - unsigned int len; - }; - typedef struct index_st index_t; - int x,y; - x = offsetof(struct index_st, len); - y = offsetof(index_t, num) + { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX can handle static cast" >&5 +$as_echo_n "checking if $CXX can handle static cast... " >&6; } + TEST_SRC="`(echo \"#define NO_STATIC_CAST 1\"; cat $srcdir/config/cmake_ext_mod/HDFCXXTests.cpp)`" - ; - return 0; -} + cat confdefs.h - <<_ACEOF >conftest.$ac_ext +/* end confdefs.h. */ +$TEST_SRC _ACEOF if ac_fn_cxx_try_link "$LINENO"; then : { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 $as_echo "yes" >&6; } - -$as_echo "#define CXX_HAVE_OFFSETOF 1" >>confdefs.h - else { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } + CXXFLAGS="${CXXFLAGS} -DNO_STATIC_CAST" + AM_CXXFLAGS="${AM_CXXFLAGS} -DNO_STATIC_CAST" fi rm -f core conftest.err conftest.$ac_objext \ conftest$ac_exeext conftest.$ac_ext - # if C++ can handle static cast + ## Checking if C++ has offsetof extension, + ## note: this test has to be the last of the C++ tests because it sets a definition + ## which would be used in the other tests, causing them to fail. + + { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX has offsetof extension" >&5 +$as_echo_n "checking if $CXX has offsetof extension... " >&6; } + TEST_SRC="`(echo \"#define CXX_HAVE_OFFSETOF 1\"; cat $srcdir/config/cmake_ext_mod/HDFCXXTests.cpp)`" - { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX can handle static cast" >&5 -$as_echo_n "checking if $CXX can handle static cast... " >&6; } cat confdefs.h - <<_ACEOF >conftest.$ac_ext /* end confdefs.h. */ - -int main(void) { - float test_float; - int test_int; - test_float = 37.0; - test_int = static_cast <int> (test_float); - return 0; -} - +$TEST_SRC _ACEOF if ac_fn_cxx_try_link "$LINENO"; then : { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 $as_echo "yes" >&6; } + +$as_echo "#define CXX_HAVE_OFFSETOF 1" >>confdefs.h + else { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } - CXXFLAGS="${CXXFLAGS} -DNO_STATIC_CAST" - AM_CXXFLAGS="${AM_CXXFLAGS} -DNO_STATIC_CAST" fi rm -f core conftest.err conftest.$ac_objext \ conftest$ac_exeext conftest.$ac_ext @@ -7501,7 +7606,6 @@ fi ## Check which archiving tool to use. This needs to be done before ## the AM_PROG_LIBTOOL macro. ## - if test -z "$AR"; then for ac_prog in ar xar do @@ -7661,36 +7765,36 @@ fi ## The following variables are used to distinguish between building a ## serial and parallel library. ## -## HAVE_PARALLEL -- defined in H5config.h if we are building -## a parallel library even if configure wasn't -## able to find some header file or library that -## might be required. This is defined if the -## user explicitly states -## that a parallel library is being built by supplying -## the `--enable-parallel' configure switch. +## HAVE_PARALLEL -- defined in H5config.h if we are building +## a parallel library even if configure wasn't +## able to find some header file or library that +## might be required. This is defined if the +## user explicitly states +## that a parallel library is being built by supplying +## the `--enable-parallel' configure switch. ## -## PARALLEL -- This variable is set to a non-null value if -## we're building a parallel version of the library. +## PARALLEL -- This variable is set to a non-null value if +## we're building a parallel version of the library. ## -## RUNSERIAL -- This is a command which will be prepended to -## the executable name to run the executable using -## a single process. For serial versions of the -## library this will normally be empty. For parallel -## versions it might be something like `mpiexec -n 1'. -## The value of this variable is substituted in *.in -## files. +## RUNSERIAL -- This is a command which will be prepended to +## the executable name to run the executable using +## a single process. For serial versions of the +## library this will normally be empty. For parallel +## versions it might be something like `mpiexec -n 1'. +## The value of this variable is substituted in *.in +## files. ## -## RUNPARALLEL -- This is a command which will be prepended to -## the executable name to run the executable on -## multiple processors. For the serial library the -## value will normally be the empty string. For -## parallel library it should be something like -## "mpiexec -n \$\${NPROCS:=6}" where NPROCS will -## eventually contain the number of processors on which -## to run the executable (the double dollarsigns are to -## protect the expansion until make executes the -## command). The value of this variable is -## substituted in *.in files. +## RUNPARALLEL -- This is a command which will be prepended to +## the executable name to run the executable on +## multiple processors. For the serial library the +## value will normally be the empty string. For +## parallel library it should be something like +## "mpiexec -n \$\${NPROCS:=6}" where NPROCS will +## eventually contain the number of processors on which +## to run the executable (the double dollarsigns are to +## protect the expansion until make executes the +## command). The value of this variable is +## substituted in *.in files. ## @@ -7752,6 +7856,52 @@ fi ## ---------------------------------------------------------------------- +## Check if they would like to disable building tests +## + +## This needs to be exposed for the library info file. + + +## Default is to build tests +HDF5_TESTS=yes + +{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if building tests is disabled" >&5 +$as_echo_n "checking if building tests is disabled... " >&6; } + +# Check whether --enable-tests was given. +if test "${enable_tests+set}" = set; then : + enableval=$enable_tests; HDF5_TESTS=$enableval +fi + + +if test "X$HDF5_TESTS" = "Xno"; then + echo "Building HDF5 tests is disabled" +fi + +## ---------------------------------------------------------------------- +## Check if they would like to disable building tools +## + +## This needs to be exposed for the library info file. + + +## Default is to build tests and tools +HDF5_TOOLS=yes + +{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if building tools is disabled" >&5 +$as_echo_n "checking if building tools is disabled... " >&6; } + +# Check whether --enable-tools was given. +if test "${enable_tools+set}" = set; then : + enableval=$enable_tools; HDF5_TOOLS=$enableval +fi + + +if test "X$HDF5_TOOLS" = "Xno"; then + echo "Building HDF5 tools is disabled" +fi + +## ---------------------------------------------------------------------- ## Create libtool. If shared/static libraries are going to be enabled ## or disabled, it should happen before these macros. @@ -22292,8 +22442,8 @@ if test "X$STATIC_EXEC" = "Xyes"; then echo "yes" ## Issue a warning if -static flag is not supported. if test "X$lt_cv_prog_compiler_static_works" = "Xno"; then - echo " warning: -static flag not supported on this system; executable won't statically link shared system libraries." - LT_STATIC_EXEC="" + echo " warning: -static flag not supported on this system; executable won't statically link shared system libraries." + LT_STATIC_EXEC="" else LT_STATIC_EXEC="-all-static" fi @@ -24962,7 +25112,6 @@ $as_echo "yes" >&6; } else { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } - fi rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext @@ -24979,12 +25128,18 @@ fi ## ---------------------------------------------------------------------- -## Is the dmalloc present? It has a header file `dmalloc.h' and a library -## `-ldmalloc' and their locations might be specified with the `--with-dmalloc' -## command-line switch. The value is an include path and/or a library path. -## If the library path is specified then it must be preceded by a comma. +## Is dmalloc (debug malloc library) requested? It has a header file +## `dmalloc.h' and a library `-ldmalloc' and their locations might be +## specified with the `--with-dmalloc' command-line switch. The value +## is an include path and/or a library path. If the library path is +## specified then it must be preceded by a comma. ## + +## Default is not present +HAVE_DMALLOC=no + + # Check whether --with-dmalloc was given. if test "${with_dmalloc+set}" = set; then : withval=$with_dmalloc; @@ -24993,8 +25148,8 @@ else fi -case $withval in - yes) +case "X-$withval" in + X-yes) HAVE_DMALLOC="yes" for ac_header in dmalloc.h do : @@ -25071,7 +25226,7 @@ fi as_fn_error $? "couldn't find dmalloc library" "$LINENO" 5 fi ;; - no) + X-|X-no|X-none) HAVE_DMALLOC="no" { $as_echo "$as_me:${as_lineno-$LINENO}: checking for dmalloc library" >&5 $as_echo_n "checking for dmalloc library... " >&6; } @@ -25203,8 +25358,8 @@ else fi -case $withval in - yes) +case "X-$withval" in + X-yes) HAVE_ZLIB="yes" for ac_header in zlib.h do : @@ -25289,7 +25444,7 @@ fi fi ;; - no) + X-|X-no|X-none) HAVE_ZLIB="no" { $as_echo "$as_me:${as_lineno-$LINENO}: checking for zlib" >&5 $as_echo_n "checking for zlib... " >&6; } @@ -25423,7 +25578,7 @@ $as_echo "#define HAVE_FILTER_DEFLATE 1" >>confdefs.h if test "X$EXTERNAL_FILTERS" != "X"; then EXTERNAL_FILTERS="${EXTERNAL_FILTERS}," fi - EXTERNAL_FILTERS="${EXTERNAL_FILTERS}deflate(zlib)" + EXTERNAL_FILTERS="${EXTERNAL_FILTERS}deflate(zlib)" fi @@ -25443,8 +25598,8 @@ else fi -case $withval in - yes) +case "X-$withval" in + X-yes) HAVE_SZLIB="yes" for ac_header in szlib.h do : @@ -25521,7 +25676,7 @@ fi as_fn_error $? "couldn't find szlib library" "$LINENO" 5 fi ;; - no) + X-|X-no|X-none) HAVE_SZLIB="no" { $as_echo "$as_me:${as_lineno-$LINENO}: checking for szlib" >&5 $as_echo_n "checking for szlib... " >&6; } @@ -25553,27 +25708,13 @@ $as_echo "suppressed" >&6; } AM_CPPFLAGS="$AM_CPPFLAGS -I$szlib_inc" fi - for ac_header in szlib.h -do : - ac_fn_c_check_header_mongrel "$LINENO" "szlib.h" "ac_cv_header_szlib_h" "$ac_includes_default" -if test "x$ac_cv_header_szlib_h" = xyes; then : - cat >>confdefs.h <<_ACEOF -#define HAVE_SZLIB_H 1 -_ACEOF - HAVE_SZLIB_H="yes" -else - CPPFLAGS="$saved_CPPFLAGS"; AM_CPPFLAGS="$saved_AM_CPPFLAGS" unset HAVE_SZLIB -fi - -done - if test -n "$szlib_lib"; then LDFLAGS="$LDFLAGS -L$szlib_lib" AM_LDFLAGS="$AM_LDFLAGS -L$szlib_lib" fi - if test "x$HAVE_SZLIB" = "xyes" -a "x$HAVE_SZLIB_H" = "xyes"; then + if test "x$HAVE_SZLIB" = "xyes"; then { $as_echo "$as_me:${as_lineno-$LINENO}: checking for SZ_BufftoBuffCompress in -lsz" >&5 $as_echo_n "checking for SZ_BufftoBuffCompress in -lsz... " >&6; } if ${ac_cv_lib_sz_SZ_BufftoBuffCompress+:} false; then : @@ -25626,9 +25767,28 @@ _ACEOF LIBS="-lsz $LIBS" else - LDFLAGS="$saved_LDFLAGS"; AM_LDFLAGS="$saved_AM_LDFLAGS"; unset HAVE_SZLIB + CPPFLAGS="$saved_CPPFLAGS"; AM_CPPFLAGS="$saved_AM_CPPFLAGS"; LDFLAGS="$saved_LDFLAGS"; AM_LDFLAGS="$saved_AM_LDFLAGS"; unset HAVE_SZLIB fi + if test -n "$HAVE_SZLIB"; then + for ac_header in szlib.h +do : + ac_fn_c_check_header_mongrel "$LINENO" "szlib.h" "ac_cv_header_szlib_h" "$ac_includes_default" +if test "x$ac_cv_header_szlib_h" = xyes; then : + cat >>confdefs.h <<_ACEOF +#define HAVE_SZLIB_H 1 +_ACEOF + HAVE_SZLIB_H="yes" +else + CPPFLAGS="$saved_CPPFLAGS"; AM_CPPFLAGS="$saved_AM_CPPFLAGS" unset HAVE_SZLIB +fi + +done + + else + { $as_echo "$as_me:${as_lineno-$LINENO}: result: Using SZ_BufftoBuffCompress from libsz in $szlib_lib failed. Szip not enabled." >&5 +$as_echo "Using SZ_BufftoBuffCompress from libsz in $szlib_lib failed. Szip not enabled." >&6; } + fi fi if test -z "$HAVE_SZLIB" -a -n "$HDF5_CONFIG_ABORT"; then @@ -25648,7 +25808,7 @@ $as_echo_n "checking for szlib encoder... " >&6; } if test -z "$LD_LIBRARY_PATH"; then export LD_LIBRARY_PATH="$szlib_lib" else - export LD_LIBRARY_PATH="$szlib_lib:$LD_LIBRARY_PATH" + export LD_LIBRARY_PATH="$LD_LIBRARY_PATH:$szlib_lib" fi LL_PATH="$LD_LIBRARY_PATH" @@ -25665,16 +25825,29 @@ else cat confdefs.h - <<_ACEOF >conftest.$ac_ext /* end confdefs.h. */ - #include <szlib.h> + #include "szlib.h" + +#ifdef FC_DUMMY_MAIN +#ifndef FC_DUMMY_MAIN_EQ_F77 +# ifdef __cplusplus + extern "C" +# endif + int FC_DUMMY_MAIN() { return 1; } +#endif +#endif +int +main () +{ - int main(void) - { /* SZ_encoder_enabled returns 1 if encoder is present */ - if(SZ_encoder_enabled() == 1) - exit(0); - else - exit(1); - } + if(SZ_encoder_enabled() == 1) + exit(0); + else + exit(1); + + ; + return 0; +} _ACEOF if ac_fn_c_try_run "$LINENO"; then : @@ -25686,6 +25859,7 @@ rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \ conftest.$ac_objext conftest.beam conftest.$ac_ext fi + fi @@ -25708,13 +25882,13 @@ $as_echo "no" >&6; } if test "X$EXTERNAL_FILTERS" != "X"; then EXTERNAL_FILTERS="${EXTERNAL_FILTERS}," fi - EXTERNAL_FILTERS="${EXTERNAL_FILTERS}szip(encoder)" + EXTERNAL_FILTERS="${EXTERNAL_FILTERS}szip(encoder)" fi if test ${hdf5_cv_szlib_can_encode} = "no"; then if test "X$EXTERNAL_FILTERS" != "X"; then EXTERNAL_FILTERS="${EXTERNAL_FILTERS}," fi - EXTERNAL_FILTERS="${EXTERNAL_FILTERS}szip(no encoder)" + EXTERNAL_FILTERS="${EXTERNAL_FILTERS}szip(no encoder)" fi fi @@ -25818,6 +25992,11 @@ rm -f confcache ## Enable thread-safe version of library. It requires Pthreads support ## on POSIX systems. ## + + +## Default is no thread-safety +THREADSAFE=no + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for thread safe support" >&5 $as_echo_n "checking for thread safe support... " >&6; } # Check whether --enable-threadsafe was given. @@ -25846,7 +26025,7 @@ if test "X${ALLOW_UNSUPPORTED}" != "Xyes"; then fi fi -## --enable-threadsafe is also incompatible with --enable-fortran, unless +## --enable-threadsafe is also incompatible with --enable-fortran unless ## --enable-unsupported has been specified on the configure line. if test "X${ALLOW_UNSUPPORTED}" != "Xyes"; then if test "X${HDF_FORTRAN}" = "Xyes" -a "X${enable_threadsafe}" = "Xyes"; then @@ -25877,7 +26056,7 @@ $as_echo "#define HAVE_THREADSAFE 1" >>confdefs.h ## ---------------------------------------------------------------------- - ## Is the pthreads library present? It has a header file `pthread.h' and + ## Is the Pthreads library present? It has a header file `pthread.h' and ## a library `-lpthread' and their locations might be specified with the ## `--with-pthread' command-line switch. The value is an include path ## and/or a library path. If the library path is specified then it must @@ -26176,6 +26355,7 @@ cat confdefs.h - <<_ACEOF >conftest.$ac_ext #include <sys/time.h> #include <time.h> + #ifdef FC_DUMMY_MAIN #ifndef FC_DUMMY_MAIN_EQ_F77 # ifdef __cplusplus @@ -26252,7 +26432,7 @@ esac ## ---------------------------------------------------------------------- -## Does the struct stat have the st_blocks field? This field is not Posix. +## Does the struct stat have the st_blocks field? This field is not POSIX. ## { $as_echo "$as_me:${as_lineno-$LINENO}: checking for st_blocks in struct stat" >&5 $as_echo_n "checking for st_blocks in struct stat... " >&6; } @@ -26404,7 +26584,9 @@ rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext $as_echo_n "checking for TIOCGWINSZ... " >&6; } cat confdefs.h - <<_ACEOF >conftest.$ac_ext /* end confdefs.h. */ + #include <sys/ioctl.h> + #ifdef FC_DUMMY_MAIN #ifndef FC_DUMMY_MAIN_EQ_F77 # ifdef __cplusplus @@ -26437,7 +26619,9 @@ rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext $as_echo_n "checking for TIOCGETD... " >&6; } cat confdefs.h - <<_ACEOF >conftest.$ac_ext /* end confdefs.h. */ + #include <sys/ioctl.h> + #ifdef FC_DUMMY_MAIN #ifndef FC_DUMMY_MAIN_EQ_F77 # ifdef __cplusplus @@ -26849,7 +27033,7 @@ cat confdefs.h - <<_ACEOF >conftest.$ac_ext int main () { - const char *fname = __FUNCTION__; + ; return 0; } @@ -26925,17 +27109,30 @@ else cat confdefs.h - <<_ACEOF >conftest.$ac_ext /* end confdefs.h. */ - #include <stdio.h> - #include <stdlib.h> - #include <string.h> + #include <stdio.h> + #include <stdlib.h> + #include <string.h> - int main(void) - { - char *s = malloc(128); - long long x = (long long)1048576 * (long long)1048576; - sprintf(s,"%${hdf5_cv_printf_ll}d",x); - exit(strcmp(s,"1099511627776")); - } +#ifdef FC_DUMMY_MAIN +#ifndef FC_DUMMY_MAIN_EQ_F77 +# ifdef __cplusplus + extern "C" +# endif + int FC_DUMMY_MAIN() { return 1; } +#endif +#endif +int +main () +{ + + char *s = malloc(128); + long long x = (long long)1048576 * (long long)1048576; + sprintf(s,"%${hdf5_cv_printf_ll}d",x); + exit(strcmp(s,"1099511627776")); + + ; + return 0; +} _ACEOF if ac_fn_c_try_run "$LINENO"; then : @@ -27015,6 +27212,200 @@ $as_echo "no" >&6; } fi ## ---------------------------------------------------------------------- +## Check if the compiler should include symbols +## +{ $as_echo "$as_me:${as_lineno-$LINENO}: checking enable debugging symbols" >&5 +$as_echo_n "checking enable debugging symbols... " >&6; } +# Check whether --enable-symbols was given. +if test "${enable_symbols+set}" = set; then : + enableval=$enable_symbols; SYMBOLS=$enableval +fi + + +## Set default +if test "X-$SYMBOLS" = X- ; then + if test "X-$CONFIG_MODE" = "X-development" ; then + SYMBOLS=yes + else + SYMBOLS=no + fi +fi + +## Allow this variable to be substituted in +## other files (src/libhdf5.settings.in, etc.) + + +case "X-$SYMBOLS" in + X-yes) + H5_CFLAGS="$H5_CFLAGS $SYMBOLS_CFLAGS" + H5_CXXFLAGS="$H5_CXXFLAGS $SYMBOLS_CXXFLAGS" + H5_FCFLAGS="$H5_FCFLAGS $SYMBOLS_FCFLAGS" + { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 +$as_echo "yes" >&6; } + ;; + X-no) + H5_CFLAGS="$H5_CFLAGS $NO_SYMBOLS_CFLAGS" + H5_CXXFLAGS="$H5_CXXFLAGS $NO_SYMBOLS_CXXFLAGS" + H5_FCFLAGS="$H5_FCFLAGS $NO_SYMBOLS_FCFLAGS" + { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 +$as_echo "no" >&6; } + ;; + *) + H5_CFLAGS="$H5_CFLAGS $SYMBOLS" + H5_CXXFLAGS="$H5_CXXFLAGS $SYMBOLS" + H5_FCFLAGS="$H5_FCFLAGS $SYMBOLS" + SYMBOLS="custom ($SYMBOLS)" + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $SYMBOLS" >&5 +$as_echo "$SYMBOLS" >&6; } + ;; +esac + +## ---------------------------------------------------------------------- +## Check if developer warnings should be turned on +## These are warnings that provide suggestions like gcc's -Wsuggest-attribute. +## They do not indicate code problems. +## +## Note that developers don't need to build with these regularly. They +## are just handy to check once in a while (before releases, etc.). +## +{ $as_echo "$as_me:${as_lineno-$LINENO}: checking enable developer warnings" >&5 +$as_echo_n "checking enable developer warnings... " >&6; } +# Check whether --enable-developer-warnings was given. +if test "${enable_developer_warnings+set}" = set; then : + enableval=$enable_developer_warnings; DEV_WARNINGS=$enableval +fi + + +## Set default +if test "X-$DEV_WARNINGS" = X- ; then + DEV_WARNINGS=no +fi + +## Allow this variable to be substituted in +## other files (src/libhdf5.settings.in, etc.) + + +case "X-$DEV_WARNINGS" in + X-yes) + H5_CFLAGS="$H5_CFLAGS $DEVELOPER_WARNING_CFLAGS" + { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 +$as_echo "yes" >&6; } + ;; + X-no) + H5_CFLAGS="$H5_CFLAGS $NO_DEVELOPER_WARNING_CFLAGS" + { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 +$as_echo "no" >&6; } + ;; + *) + as_fn_error $? "Unrecognized value: $DEV_WARNINGS" "$LINENO" 5 + ;; +esac + +## ---------------------------------------------------------------------- +## Check if the compiler should use profiling flags/settings +## +{ $as_echo "$as_me:${as_lineno-$LINENO}: checking profiling" >&5 +$as_echo_n "checking profiling... " >&6; } +# Check whether --enable-profiling was given. +if test "${enable_profiling+set}" = set; then : + enableval=$enable_profiling; PROFILING=$enableval +fi + + +## Default is no profiling +if test "X-$PROFILING" = X- ; then + PROFILING=no +fi + +## Allow this variable to be substituted in +## other files (src/libhdf5.settings.in, etc.) + + +case "X-$PROFILING" in + X-yes) + H5_CFLAGS="$H5_CFLAGS $PROFILE_CFLAGS" + H5_CXXFLAGS="$H5_CXXFLAGS $PROFILE_CXXFLAGS" + H5_FCFLAGS="$H5_FCFLAGS $PROFILE_FCFLAGS" + { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 +$as_echo "yes" >&6; } + ;; + X-no) + { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 +$as_echo "no" >&6; } + ;; + *) + H5_CFLAGS="$H5_CFLAGS $PROFILING" + H5_CXXFLAGS="$H5_CXXFLAGS $PROFILING" + H5_FCFLAGS="$H5_FCFLAGS $PROFILING" + PROFILING="custom ($PROFILING)" + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $PROFILING" >&5 +$as_echo "$PROFILING" >&6; } + ;; +esac + +## ---------------------------------------------------------------------- +## Check if the compiler should use a particular optimization setting +## +{ $as_echo "$as_me:${as_lineno-$LINENO}: checking optimization level" >&5 +$as_echo_n "checking optimization level... " >&6; } +# Check whether --enable-optimization was given. +if test "${enable_optimization+set}" = set; then : + enableval=$enable_optimization; OPTIMIZATION=$enableval +fi + + +## Set the default optimization level. This depends on the compiler mode. +if test "X-$OPTIMIZATION" = X- ; then + case "X-$CONFIG_MODE" in + X-debug) + OPTIMIZATION=debug + ;; + X-production) + OPTIMIZATION=high + ;; + X-clean) + OPTIMIZATION=none + ;; + esac +fi + +## Allow this variable to be substituted in +## other files (src/libhdf5.settings.in, etc.) + + +case "X-$OPTIMIZATION" in + X-high) + H5_CFLAGS="$H5_CFLAGS $HIGH_OPT_CFLAGS" + H5_CXXFLAGS="$H5_CXXFLAGS $HIGH_OPT_CXXFLAGS" + H5_FCFLAGS="$H5_FCFLAGS $HIGH_OPT_FCFLAGS" + { $as_echo "$as_me:${as_lineno-$LINENO}: result: high" >&5 +$as_echo "high" >&6; } + ;; + X-debug) + H5_CFLAGS="$H5_CFLAGS $DEBUG_OPT_CFLAGS" + H5_CXXFLAGS="$H5_CXXFLAGS $DEBUG_OPT_CXXFLAGS" + H5_FCFLAGS="$H5_FCFLAGS $DEBUG_OPT_FCFLAGS" + { $as_echo "$as_me:${as_lineno-$LINENO}: result: debug" >&5 +$as_echo "debug" >&6; } + ;; + X-none) + H5_CFLAGS="$H5_CFLAGS $NO_OPT_CFLAGS" + H5_CXXFLAGS="$H5_CXXFLAGS $NO_OPT_CXXFLAGS" + H5_FCFLAGS="$H5_FCFLAGS $NO_OPT_FCFLAGS" + { $as_echo "$as_me:${as_lineno-$LINENO}: result: none" >&5 +$as_echo "none" >&6; } + ;; + *) + H5_CFLAGS="$H5_CFLAGS $OPTIMIZATION" + H5_CXXFLAGS="$H5_CXXFLAGS $OPTIMIZATION" + H5_FCFLAGS="$H5_FCFLAGS $OPTIMIZATION" + OPTIMIZATION="custom ($OPTIMIZATION)" + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $OPTIMIZATION" >&5 +$as_echo "$OPTIMIZATION" >&6; } + ;; +esac + +## ---------------------------------------------------------------------- ## Turn on debugging by setting compiler flags ## This must come after the enable-production since it depends on production. ## @@ -27232,7 +27623,6 @@ esac ## more scrupulous with it's memory operations. Enabling this also ## disables the library's free space manager code. ## - { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether a memory checking tool will be used" >&5 $as_echo_n "checking whether a memory checking tool will be used... " >&6; } # Check whether --enable-using-memchecker was given. @@ -27241,20 +27631,30 @@ if test "${enable_using_memchecker+set}" = set; then : fi +## Allow this variable to be substituted in +## other files (src/libhdf5.settings.in, etc.) + + +## Set the default level. +if test "X-$USINGMEMCHECKER" = X- ; then + USINGMEMCHECKER=no +fi + case "X-$USINGMEMCHECKER" in X-yes) - USINGMEMCHECKER=yes - { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 -$as_echo "yes" >&6; } $as_echo "#define USING_MEMCHECKER 1" >>confdefs.h + { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 +$as_echo "yes" >&6; } ;; - *) - USINGMEMCHECKER=no + X-no) { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } ;; + *) + as_fn_error $? "Unrecognized value: $USINGMEMCHECKER" "$LINENO" 5 + ;; esac ## Checkpoint the cache @@ -27405,7 +27805,7 @@ int main () { MPI_Init(0, (void *)0); - MPI_File_open(0, (void *)0, 0, 0, (void *)0); + MPI_File_open(0, (void *)0, 0, 0, (void *)0); ; return 0; } @@ -27416,7 +27816,7 @@ $as_echo "yes" >&6; } else { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } - as_fn_error $? "unable to link a simple MPI-IO C program" "$LINENO" 5 + as_fn_error $? "unable to link a simple MPI-IO C program" "$LINENO" 5 fi rm -f core conftest.err conftest.$ac_objext \ conftest$ac_exeext conftest.$ac_ext @@ -27429,17 +27829,11 @@ ac_compile='$FC -c $FCFLAGS $ac_fcflags_srcext conftest.$ac_ext >&5' ac_link='$FC -o conftest$ac_exeext $FCFLAGS $LDFLAGS $ac_fcflags_srcext conftest.$ac_ext $LIBS >&5' ac_compiler_gnu=$ac_cv_fc_compiler_gnu - + TEST_SRC="`sed -n '/PROGRAM FC_MPI_CHECK/,/END PROGRAM FC_MPI_CHECK/p' $srcdir/m4/aclocal_fc.f90`" { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether a simple MPI-IO Fortran program can be linked" >&5 $as_echo_n "checking whether a simple MPI-IO Fortran program can be linked... " >&6; } cat > conftest.$ac_ext <<_ACEOF - - PROGRAM main - USE mpi - INTEGER :: comm, amode, info, fh, ierror - CHARACTER(LEN=1) :: filename - CALL MPI_File_open( comm, filename, amode, info, fh, ierror) - END +$TEST_SRC _ACEOF if ac_fn_fc_try_link "$LINENO"; then : { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 @@ -27476,12 +27870,16 @@ esac ## ---------------------------------------------------------------------- ## Print some other parallel information and do some sanity checks. +## Needs to be done outside of the PARALLEL block since the serial +## build also needs to have values defined. ## ADD_PARALLEL_FILES="no" if test -n "$PARALLEL"; then - ## The 'testpar' directory should participate in the build - TESTPARALLEL=testpar + if test "X$HDF5_TESTS" = "Xyes"; then + ## The 'testpar' directory should participate in the build + TESTPARALLEL=testpar + fi ## We are building a parallel library @@ -27521,7 +27919,9 @@ $as_echo_n "checking for MPI_Comm_c2f and MPI_Comm_f2c functions... " >&6; } cat confdefs.h - <<_ACEOF >conftest.$ac_ext /* end confdefs.h. */ -#include <mpi.h> + + #include <mpi.h> + #ifdef FC_DUMMY_MAIN #ifndef FC_DUMMY_MAIN_EQ_F77 # ifdef __cplusplus @@ -27542,7 +27942,7 @@ if ac_fn_c_try_link "$LINENO"; then : $as_echo "#define HAVE_MPI_MULTI_LANG_Comm 1" >>confdefs.h - { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 + { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 $as_echo "yes" >&6; } else { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 @@ -27577,7 +27977,7 @@ if ac_fn_c_try_link "$LINENO"; then : $as_echo "#define HAVE_MPI_MULTI_LANG_Info 1" >>confdefs.h - { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 + { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 $as_echo "yes" >&6; } else { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 @@ -27864,8 +28264,9 @@ fi ## Check if Direct I/O driver is enabled by --enable-direct-vfd ## -## Check these regardless. If the checks are moved inside the main -## direct VFD block, the output is nested. + +## Default is no direct VFD +DIRECT_VFD=no if ${hdf5_cv_direct_io+:} false; then : $as_echo_n "(cached) " >&6 @@ -27925,6 +28326,7 @@ else $as_echo "no" >&6; } fi +## Direct VFD files are not built if not required. if test "X$DIRECT_VFD" = "Xyes"; then DIRECT_VFD_CONDITIONAL_TRUE= DIRECT_VFD_CONDITIONAL_FALSE='#' @@ -27935,6 +28337,548 @@ fi ## ---------------------------------------------------------------------- +## Check if Read-Only S3 virtual file driver is enabled by --enable-ros3-vfd +## + + +## Default is no Read-Only S3 VFD +ROS3_VFD=no + +# Check whether --enable-ros3-vfd was given. +if test "${enable_ros3_vfd+set}" = set; then : + enableval=$enable_ros3_vfd; ROS3_VFD=$enableval +else + ROS3_VFD=no +fi + + +if test "X$ROS3_VFD" = "Xyes"; then + for ac_header in curl/curl.h +do : + ac_fn_c_check_header_mongrel "$LINENO" "curl/curl.h" "ac_cv_header_curl_curl_h" "$ac_includes_default" +if test "x$ac_cv_header_curl_curl_h" = xyes; then : + cat >>confdefs.h <<_ACEOF +#define HAVE_CURL_CURL_H 1 +_ACEOF + +else + unset ROS3_VFD +fi + +done + + for ac_header in openssl/evp.h +do : + ac_fn_c_check_header_mongrel "$LINENO" "openssl/evp.h" "ac_cv_header_openssl_evp_h" "$ac_includes_default" +if test "x$ac_cv_header_openssl_evp_h" = xyes; then : + cat >>confdefs.h <<_ACEOF +#define HAVE_OPENSSL_EVP_H 1 +_ACEOF + +else + unset ROS3_VFD +fi + +done + + for ac_header in openssl/hmac.h +do : + ac_fn_c_check_header_mongrel "$LINENO" "openssl/hmac.h" "ac_cv_header_openssl_hmac_h" "$ac_includes_default" +if test "x$ac_cv_header_openssl_hmac_h" = xyes; then : + cat >>confdefs.h <<_ACEOF +#define HAVE_OPENSSL_HMAC_H 1 +_ACEOF + +else + unset ROS3_VFD +fi + +done + + for ac_header in openssl/sha.h +do : + ac_fn_c_check_header_mongrel "$LINENO" "openssl/sha.h" "ac_cv_header_openssl_sha_h" "$ac_includes_default" +if test "x$ac_cv_header_openssl_sha_h" = xyes; then : + cat >>confdefs.h <<_ACEOF +#define HAVE_OPENSSL_SHA_H 1 +_ACEOF + +else + unset ROS3_VFD +fi + +done + + if test "X$ROS3_VFD" = "Xyes"; then + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for curl_global_init in -lcurl" >&5 +$as_echo_n "checking for curl_global_init in -lcurl... " >&6; } +if ${ac_cv_lib_curl_curl_global_init+:} false; then : + $as_echo_n "(cached) " >&6 +else + ac_check_lib_save_LIBS=$LIBS +LIBS="-lcurl $LIBS" +cat confdefs.h - <<_ACEOF >conftest.$ac_ext +/* end confdefs.h. */ + +/* Override any GCC internal prototype to avoid an error. + Use char because int might match the return type of a GCC + builtin and then its argument prototype would still apply. */ +#ifdef __cplusplus +extern "C" +#endif +char curl_global_init (); +#ifdef FC_DUMMY_MAIN +#ifndef FC_DUMMY_MAIN_EQ_F77 +# ifdef __cplusplus + extern "C" +# endif + int FC_DUMMY_MAIN() { return 1; } +#endif +#endif +int +main () +{ +return curl_global_init (); + ; + return 0; +} +_ACEOF +if ac_fn_c_try_link "$LINENO"; then : + ac_cv_lib_curl_curl_global_init=yes +else + ac_cv_lib_curl_curl_global_init=no +fi +rm -f core conftest.err conftest.$ac_objext \ + conftest$ac_exeext conftest.$ac_ext +LIBS=$ac_check_lib_save_LIBS +fi +{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_curl_curl_global_init" >&5 +$as_echo "$ac_cv_lib_curl_curl_global_init" >&6; } +if test "x$ac_cv_lib_curl_curl_global_init" = xyes; then : + cat >>confdefs.h <<_ACEOF +#define HAVE_LIBCURL 1 +_ACEOF + + LIBS="-lcurl $LIBS" + +else + unset ROS3_VFD +fi + + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for EVP_sha256 in -lcrypto" >&5 +$as_echo_n "checking for EVP_sha256 in -lcrypto... " >&6; } +if ${ac_cv_lib_crypto_EVP_sha256+:} false; then : + $as_echo_n "(cached) " >&6 +else + ac_check_lib_save_LIBS=$LIBS +LIBS="-lcrypto $LIBS" +cat confdefs.h - <<_ACEOF >conftest.$ac_ext +/* end confdefs.h. */ + +/* Override any GCC internal prototype to avoid an error. + Use char because int might match the return type of a GCC + builtin and then its argument prototype would still apply. */ +#ifdef __cplusplus +extern "C" +#endif +char EVP_sha256 (); +#ifdef FC_DUMMY_MAIN +#ifndef FC_DUMMY_MAIN_EQ_F77 +# ifdef __cplusplus + extern "C" +# endif + int FC_DUMMY_MAIN() { return 1; } +#endif +#endif +int +main () +{ +return EVP_sha256 (); + ; + return 0; +} +_ACEOF +if ac_fn_c_try_link "$LINENO"; then : + ac_cv_lib_crypto_EVP_sha256=yes +else + ac_cv_lib_crypto_EVP_sha256=no +fi +rm -f core conftest.err conftest.$ac_objext \ + conftest$ac_exeext conftest.$ac_ext +LIBS=$ac_check_lib_save_LIBS +fi +{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_crypto_EVP_sha256" >&5 +$as_echo "$ac_cv_lib_crypto_EVP_sha256" >&6; } +if test "x$ac_cv_lib_crypto_EVP_sha256" = xyes; then : + cat >>confdefs.h <<_ACEOF +#define HAVE_LIBCRYPTO 1 +_ACEOF + + LIBS="-lcrypto $LIBS" + +else + unset ROS3_VFD +fi + + fi + + { $as_echo "$as_me:${as_lineno-$LINENO}: checking if the Read-Only S3 virtual file driver (VFD) is enabled" >&5 +$as_echo_n "checking if the Read-Only S3 virtual file driver (VFD) is enabled... " >&6; } + if test "X$ROS3_VFD" = "Xyes"; then + +$as_echo "#define HAVE_ROS3_VFD 1" >>confdefs.h + + { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5 +$as_echo "yes" >&6; } + else + { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 +$as_echo "no" >&6; } + ROS3_VFD=no + as_fn_error $? "The Read-Only S3 VFD was requested but cannot be built. + Please check that openssl and cURL are available on your + system, and/or re-configure without option + --enable-ros3-vfd." "$LINENO" 5 + fi +else + { $as_echo "$as_me:${as_lineno-$LINENO}: checking if the Read-Only S3 virtual file driver (VFD) is enabled" >&5 +$as_echo_n "checking if the Read-Only S3 virtual file driver (VFD) is enabled... " >&6; } + { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 +$as_echo "no" >&6; } + ROS3_VFD=no + +fi + +## Read-only S3 files are not built if not required. + if test "X$ROS3_VFD" = "Xyes"; then + ROS3_VFD_CONDITIONAL_TRUE= + ROS3_VFD_CONDITIONAL_FALSE='#' +else + ROS3_VFD_CONDITIONAL_TRUE='#' + ROS3_VFD_CONDITIONAL_FALSE= +fi + + + +## ---------------------------------------------------------------------- +## Is libhdfs (Hadoop Distributed File System) present? +## It might be specified with the `--with-libhdfs' command-line switch. +## If found, enables the HDFS VFD. +## + + +# Check whether --with-libhdfs was given. +if test "${with_libhdfs+set}" = set; then : + withval=$with_libhdfs; +else + withval=no +fi + + +case $withval in + no) + HAVE_LIBHDFS="no" + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for libhdfs" >&5 +$as_echo_n "checking for libhdfs... " >&6; } + { $as_echo "$as_me:${as_lineno-$LINENO}: result: suppressed" >&5 +$as_echo "suppressed" >&6; } + ;; + *) + HAVE_LIBHDFS="yes" + case "$withval" in + *,*) + libhdfs_inc="`echo $withval |cut -f1 -d,`" + libhdfs_lib="`echo $withval |cut -f2 -d, -s`" + ;; + yes) + libhdfs_inc="$HADOOP_HOME/include" + libhdfs_lib="$HADOOP_HOME/lib" + ;; + *) + if test -n "$withval"; then + libhdfs_inc="$withval/include" + libhdfs_lib="$withval/lib" + fi + ;; + esac + + if test -n "$libhdfs_inc"; then + CPPFLAGS="$CPPFLAGS -I$libhdfs_inc" + AM_CPPFLAGS="$AM_CPPFLAGS -I$libhdfs_inc" + fi + for ac_header in hdfs.h +do : + ac_fn_c_check_header_mongrel "$LINENO" "hdfs.h" "ac_cv_header_hdfs_h" "$ac_includes_default" +if test "x$ac_cv_header_hdfs_h" = xyes; then : + cat >>confdefs.h <<_ACEOF +#define HAVE_HDFS_H 1 +_ACEOF + +else + unset HAVE_LIBHDFS +fi + +done + + + if test "x$HAVE_LIBHDFS" = "xyes"; then + JNI_LDFLAGS="" + if test $JAVA_HOME != "" + then + JNI_LDFLAGS="-L$JAVA_HOME/jre/lib/$OS_ARCH -L$JAVA_HOME/jre/lib/$OS_ARCH/server" + fi + ldflags_bak=$LDFLAGS + LDFLAGS="$LDFLAGS $JNI_LDFLAGS" + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for JNI_GetCreatedJavaVMs in -ljvm" >&5 +$as_echo_n "checking for JNI_GetCreatedJavaVMs in -ljvm... " >&6; } +if ${ac_cv_lib_jvm_JNI_GetCreatedJavaVMs+:} false; then : + $as_echo_n "(cached) " >&6 +else + ac_check_lib_save_LIBS=$LIBS +LIBS="-ljvm $LIBS" +cat confdefs.h - <<_ACEOF >conftest.$ac_ext +/* end confdefs.h. */ + +/* Override any GCC internal prototype to avoid an error. + Use char because int might match the return type of a GCC + builtin and then its argument prototype would still apply. */ +#ifdef __cplusplus +extern "C" +#endif +char JNI_GetCreatedJavaVMs (); +#ifdef FC_DUMMY_MAIN +#ifndef FC_DUMMY_MAIN_EQ_F77 +# ifdef __cplusplus + extern "C" +# endif + int FC_DUMMY_MAIN() { return 1; } +#endif +#endif +int +main () +{ +return JNI_GetCreatedJavaVMs (); + ; + return 0; +} +_ACEOF +if ac_fn_c_try_link "$LINENO"; then : + ac_cv_lib_jvm_JNI_GetCreatedJavaVMs=yes +else + ac_cv_lib_jvm_JNI_GetCreatedJavaVMs=no +fi +rm -f core conftest.err conftest.$ac_objext \ + conftest$ac_exeext conftest.$ac_ext +LIBS=$ac_check_lib_save_LIBS +fi +{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_jvm_JNI_GetCreatedJavaVMs" >&5 +$as_echo "$ac_cv_lib_jvm_JNI_GetCreatedJavaVMs" >&6; } +if test "x$ac_cv_lib_jvm_JNI_GetCreatedJavaVMs" = xyes; then : + cat >>confdefs.h <<_ACEOF +#define HAVE_LIBJVM 1 +_ACEOF + + LIBS="-ljvm $LIBS" + +fi + + LDFLAGS=$ldflags_bak + + if test -n "$libhdfs_lib"; then + ## Hadoop distribution hides libraries down one level in 'lib/native' + libhdfs_lib="$libhdfs_lib/native" + LDFLAGS="$LDFLAGS -L$libhdfs_lib $JNI_LDFLAGS" + AM_LDFLAGS="$AM_LDFLAGS -L$libhdfs_lib $JNI_LDFLAGS" + fi + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for hdfsConnect in -lhdfs" >&5 +$as_echo_n "checking for hdfsConnect in -lhdfs... " >&6; } +if ${ac_cv_lib_hdfs_hdfsConnect+:} false; then : + $as_echo_n "(cached) " >&6 +else + ac_check_lib_save_LIBS=$LIBS +LIBS="-lhdfs $LIBS" +cat confdefs.h - <<_ACEOF >conftest.$ac_ext +/* end confdefs.h. */ + +/* Override any GCC internal prototype to avoid an error. + Use char because int might match the return type of a GCC + builtin and then its argument prototype would still apply. */ +#ifdef __cplusplus +extern "C" +#endif +char hdfsConnect (); +#ifdef FC_DUMMY_MAIN +#ifndef FC_DUMMY_MAIN_EQ_F77 +# ifdef __cplusplus + extern "C" +# endif + int FC_DUMMY_MAIN() { return 1; } +#endif +#endif +int +main () +{ +return hdfsConnect (); + ; + return 0; +} +_ACEOF +if ac_fn_c_try_link "$LINENO"; then : + ac_cv_lib_hdfs_hdfsConnect=yes +else + ac_cv_lib_hdfs_hdfsConnect=no +fi +rm -f core conftest.err conftest.$ac_objext \ + conftest$ac_exeext conftest.$ac_ext +LIBS=$ac_check_lib_save_LIBS +fi +{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_hdfs_hdfsConnect" >&5 +$as_echo "$ac_cv_lib_hdfs_hdfsConnect" >&6; } +if test "x$ac_cv_lib_hdfs_hdfsConnect" = xyes; then : + cat >>confdefs.h <<_ACEOF +#define HAVE_LIBHDFS 1 +_ACEOF + + LIBS="-lhdfs $LIBS" + +else + unset HAVE_LIBHDFS +fi + + fi + + if test -z "$HAVE_LIBHDFS"; then + as_fn_error $? "Set to use libhdfs library, but could not find or use + libhdfs. Please verify that the path to HADOOP_HOME is + valid, and/or reconfigure without --with-libhdfs." "$LINENO" 5 + fi + ;; +esac + +if test "x$HAVE_LIBHDFS" = "xyes"; then + +$as_echo "#define HAVE_LIBHDFS 1" >>confdefs.h + +fi + +## Checkpoint the cache +cat >confcache <<\_ACEOF +# This file is a shell script that caches the results of configure +# tests run on this system so they can be shared between configure +# scripts and configure runs, see configure's option --config-cache. +# It is not useful on other systems. If it contains results you don't +# want to keep, you may remove or edit it. +# +# config.status only pays attention to the cache file if you give it +# the --recheck option to rerun configure. +# +# `ac_cv_env_foo' variables (set or unset) will be overridden when +# loading this file, other *unset* `ac_cv_foo' will be assigned the +# following values. + +_ACEOF + +# The following way of writing the cache mishandles newlines in values, +# but we know of no workaround that is simple, portable, and efficient. +# So, we kill variables containing newlines. +# Ultrix sh set writes to stderr and can't be redirected directly, +# and sets the high bit in the cache file unless we assign to the vars. +( + for ac_var in `(set) 2>&1 | sed -n 's/^\([a-zA-Z_][a-zA-Z0-9_]*\)=.*/\1/p'`; do + eval ac_val=\$$ac_var + case $ac_val in #( + *${as_nl}*) + case $ac_var in #( + *_cv_*) { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: cache variable $ac_var contains a newline" >&5 +$as_echo "$as_me: WARNING: cache variable $ac_var contains a newline" >&2;} ;; + esac + case $ac_var in #( + _ | IFS | as_nl) ;; #( + BASH_ARGV | BASH_SOURCE) eval $ac_var= ;; #( + *) { eval $ac_var=; unset $ac_var;} ;; + esac ;; + esac + done + + (set) 2>&1 | + case $as_nl`(ac_space=' '; set) 2>&1` in #( + *${as_nl}ac_space=\ *) + # `set' does not quote correctly, so add quotes: double-quote + # substitution turns \\\\ into \\, and sed turns \\ into \. + sed -n \ + "s/'/'\\\\''/g; + s/^\\([_$as_cr_alnum]*_cv_[_$as_cr_alnum]*\\)=\\(.*\\)/\\1='\\2'/p" + ;; #( + *) + # `set' quotes correctly as required by POSIX, so do not add quotes. + sed -n "/^[_$as_cr_alnum]*_cv_[_$as_cr_alnum]*=/p" + ;; + esac | + sort +) | + sed ' + /^ac_cv_env_/b end + t clear + :clear + s/^\([^=]*\)=\(.*[{}].*\)$/test "${\1+set}" = set || &/ + t end + s/^\([^=]*\)=\(.*\)$/\1=${\1=\2}/ + :end' >>confcache +if diff "$cache_file" confcache >/dev/null 2>&1; then :; else + if test -w "$cache_file"; then + if test "x$cache_file" != "x/dev/null"; then + { $as_echo "$as_me:${as_lineno-$LINENO}: updating cache $cache_file" >&5 +$as_echo "$as_me: updating cache $cache_file" >&6;} + if test ! -f "$cache_file" || test -h "$cache_file"; then + cat confcache >"$cache_file" + else + case $cache_file in #( + */* | ?:*) + mv -f confcache "$cache_file"$$ && + mv -f "$cache_file"$$ "$cache_file" ;; #( + *) + mv -f confcache "$cache_file" ;; + esac + fi + fi + else + { $as_echo "$as_me:${as_lineno-$LINENO}: not updating unwritable cache $cache_file" >&5 +$as_echo "$as_me: not updating unwritable cache $cache_file" >&6;} + fi +fi +rm -f confcache + +## ---------------------------------------------------------------------- +## Use custom examples path. +## +{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for custom examples path definition" >&5 +$as_echo_n "checking for custom examples path definition... " >&6; } + +# Check whether --with-examplesdir was given. +if test "${with_examplesdir+set}" = set; then : + withval=$with_examplesdir; +else + withval="${datarootdir}/hdf5_examples" +fi + + +if test "X$withval" = "X"; then + { $as_echo "$as_me:${as_lineno-$LINENO}: result: default" >&5 +$as_echo "default" >&6; } + examplesdir="${datarootdir}/hdf5_examples" +else + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $withval" >&5 +$as_echo "$withval" >&6; } + examplesdir=$withval +fi + + + +cat >>confdefs.h <<_ACEOF +#define EXAMPLESDIR "$examplesdir" +_ACEOF + + +## ---------------------------------------------------------------------- ## Enable custom plugin default path for library. It requires SHARED support. ## { $as_echo "$as_me:${as_lineno-$LINENO}: checking for custom plugin default path definition" >&5 @@ -28849,7 +29793,7 @@ else BUILD_CXX_CONDITIONAL_FALSE= fi - if test -n "$TESTPARALLEL"; then + if test "X$PARALLEL" = "Xyes"; then BUILD_PARALLEL_CONDITIONAL_TRUE= BUILD_PARALLEL_CONDITIONAL_FALSE='#' else @@ -28873,6 +29817,29 @@ else BUILD_HDF5_HL_CONDITIONAL_FALSE= fi + if test "X$HDF5_TESTS" = "Xyes"; then + BUILD_TESTS_CONDITIONAL_TRUE= + BUILD_TESTS_CONDITIONAL_FALSE='#' +else + BUILD_TESTS_CONDITIONAL_TRUE='#' + BUILD_TESTS_CONDITIONAL_FALSE= +fi + + if test -n "$TESTPARALLEL"; then + BUILD_TESTS_PARALLEL_CONDITIONAL_TRUE= + BUILD_TESTS_PARALLEL_CONDITIONAL_FALSE='#' +else + BUILD_TESTS_PARALLEL_CONDITIONAL_TRUE='#' + BUILD_TESTS_PARALLEL_CONDITIONAL_FALSE= +fi + + if test "X$HDF5_TOOLS" = "Xyes"; then + BUILD_TOOLS_CONDITIONAL_TRUE= + BUILD_TOOLS_CONDITIONAL_FALSE='#' +else + BUILD_TOOLS_CONDITIONAL_TRUE='#' + BUILD_TOOLS_CONDITIONAL_FALSE= +fi ## ---------------------------------------------------------------------- @@ -29315,7 +30282,7 @@ Usage: $0 [OPTIONS] Report bugs to <bug-libtool@gnu.org>." lt_cl_version="\ -HDF5 config.lt 1.8.21 +HDF5 config.lt 1.8.22 configured by $0, generated by GNU Autoconf 2.69. Copyright (C) 2011 Free Software Foundation, Inc. @@ -30769,7 +31736,7 @@ else fi -ac_config_files="$ac_config_files src/libhdf5.settings Makefile src/Makefile test/Makefile test/testcheck_version.sh test/testerror.sh test/H5srcdir_str.h test/testlibinfo.sh test/testlinks_env.sh test/test_plugin.sh testpar/Makefile tools/Makefile tools/h5dump/Makefile tools/h5dump/h5dump_plugin.sh tools/h5dump/testh5dump.sh tools/h5dump/testh5dumppbits.sh tools/h5dump/testh5dumpxml.sh tools/h5ls/Makefile tools/h5ls/h5ls_plugin.sh tools/h5ls/testh5ls.sh tools/h5import/Makefile tools/h5import/h5importtestutil.sh tools/h5diff/Makefile tools/h5diff/h5diff_plugin.sh tools/h5diff/testh5diff.sh tools/h5diff/testph5diff.sh tools/h5jam/Makefile tools/h5jam/testh5jam.sh tools/h5repack/Makefile tools/h5repack/h5repack.sh tools/h5repack/h5repack_plugin.sh tools/h5copy/Makefile tools/h5copy/testh5copy.sh tools/lib/Makefile tools/misc/Makefile tools/misc/h5cc tools/misc/testh5mkgrp.sh tools/misc/testh5repart.sh tools/h5stat/testh5stat.sh tools/h5stat/Makefile tools/perform/Makefile examples/Makefile examples/run-c-ex.sh examples/testh5cc.sh c++/Makefile c++/src/Makefile c++/src/h5c++ c++/test/Makefile c++/test/H5srcdir_str.h c++/examples/Makefile c++/examples/run-c++-ex.sh c++/examples/testh5c++.sh fortran/Makefile fortran/src/h5fc fortran/src/Makefile fortran/test/Makefile fortran/testpar/Makefile fortran/examples/Makefile fortran/examples/run-fortran-ex.sh fortran/examples/testh5fc.sh hl/Makefile hl/src/Makefile hl/test/Makefile hl/test/H5srcdir_str.h hl/tools/Makefile hl/tools/gif2h5/Makefile hl/tools/gif2h5/h52giftest.sh hl/examples/Makefile hl/examples/run-hlc-ex.sh hl/c++/Makefile hl/c++/src/Makefile hl/c++/test/Makefile hl/c++/examples/Makefile hl/c++/examples/run-hlc++-ex.sh hl/fortran/Makefile hl/fortran/src/Makefile hl/fortran/test/Makefile hl/fortran/examples/Makefile hl/fortran/examples/run-hlfortran-ex.sh" +ac_config_files="$ac_config_files src/libhdf5.settings Makefile src/Makefile test/Makefile test/testcheck_version.sh test/testerror.sh test/H5srcdir_str.h test/testlibinfo.sh test/testlinks_env.sh test/test_plugin.sh testpar/Makefile testpar/testpflush.sh tools/Makefile tools/h5dump/Makefile tools/h5dump/h5dump_plugin.sh tools/h5dump/testh5dump.sh tools/h5dump/testh5dumppbits.sh tools/h5dump/testh5dumpxml.sh tools/h5ls/Makefile tools/h5ls/h5ls_plugin.sh tools/h5ls/testh5ls.sh tools/h5import/Makefile tools/h5import/h5importtestutil.sh tools/h5diff/Makefile tools/h5diff/h5diff_plugin.sh tools/h5diff/testh5diff.sh tools/h5diff/testph5diff.sh tools/h5jam/Makefile tools/h5jam/testh5jam.sh tools/h5repack/Makefile tools/h5repack/h5repack.sh tools/h5repack/h5repack_plugin.sh tools/h5copy/Makefile tools/h5copy/testh5copy.sh tools/lib/Makefile tools/libtest/Makefile tools/misc/Makefile tools/misc/testh5mkgrp.sh tools/misc/testh5repart.sh tools/h5stat/testh5stat.sh tools/h5stat/Makefile tools/perform/Makefile examples/Makefile examples/run-c-ex.sh examples/testh5cc.sh bin/h5cc bin/Makefile c++/Makefile c++/src/Makefile c++/src/h5c++ c++/test/Makefile c++/test/H5srcdir_str.h c++/examples/Makefile c++/examples/run-c++-ex.sh c++/examples/testh5c++.sh fortran/Makefile fortran/src/h5fc fortran/src/Makefile fortran/test/Makefile fortran/testpar/Makefile fortran/examples/Makefile fortran/examples/run-fortran-ex.sh fortran/examples/testh5fc.sh hl/Makefile hl/src/Makefile hl/test/Makefile hl/test/H5srcdir_str.h hl/tools/Makefile hl/tools/gif2h5/Makefile hl/tools/gif2h5/h52giftest.sh hl/examples/Makefile hl/examples/run-hlc-ex.sh hl/c++/Makefile hl/c++/src/Makefile hl/c++/test/Makefile hl/c++/examples/Makefile hl/c++/examples/run-hlc++-ex.sh hl/fortran/Makefile hl/fortran/src/Makefile hl/fortran/test/Makefile hl/fortran/examples/Makefile hl/fortran/examples/run-hlfortran-ex.sh" cat >confcache <<\_ACEOF @@ -30954,6 +31921,10 @@ if test -z "${DIRECT_VFD_CONDITIONAL_TRUE}" && test -z "${DIRECT_VFD_CONDITIONAL as_fn_error $? "conditional \"DIRECT_VFD_CONDITIONAL\" was never defined. Usually this means the macro was only invoked conditionally." "$LINENO" 5 fi +if test -z "${ROS3_VFD_CONDITIONAL_TRUE}" && test -z "${ROS3_VFD_CONDITIONAL_FALSE}"; then + as_fn_error $? "conditional \"ROS3_VFD_CONDITIONAL\" was never defined. +Usually this means the macro was only invoked conditionally." "$LINENO" 5 +fi if test -z "${BUILD_ALL_CONDITIONAL_TRUE}" && test -z "${BUILD_ALL_CONDITIONAL_FALSE}"; then as_fn_error $? "conditional \"BUILD_ALL_CONDITIONAL\" was never defined. Usually this means the macro was only invoked conditionally." "$LINENO" 5 @@ -30974,6 +31945,18 @@ if test -z "${BUILD_HDF5_HL_CONDITIONAL_TRUE}" && test -z "${BUILD_HDF5_HL_CONDI as_fn_error $? "conditional \"BUILD_HDF5_HL_CONDITIONAL\" was never defined. Usually this means the macro was only invoked conditionally." "$LINENO" 5 fi +if test -z "${BUILD_TESTS_CONDITIONAL_TRUE}" && test -z "${BUILD_TESTS_CONDITIONAL_FALSE}"; then + as_fn_error $? "conditional \"BUILD_TESTS_CONDITIONAL\" was never defined. +Usually this means the macro was only invoked conditionally." "$LINENO" 5 +fi +if test -z "${BUILD_TESTS_PARALLEL_CONDITIONAL_TRUE}" && test -z "${BUILD_TESTS_PARALLEL_CONDITIONAL_FALSE}"; then + as_fn_error $? "conditional \"BUILD_TESTS_PARALLEL_CONDITIONAL\" was never defined. +Usually this means the macro was only invoked conditionally." "$LINENO" 5 +fi +if test -z "${BUILD_TOOLS_CONDITIONAL_TRUE}" && test -z "${BUILD_TOOLS_CONDITIONAL_FALSE}"; then + as_fn_error $? "conditional \"BUILD_TOOLS_CONDITIONAL\" was never defined. +Usually this means the macro was only invoked conditionally." "$LINENO" 5 +fi if test -z "${HAVE_SHARED_CONDITIONAL_TRUE}" && test -z "${HAVE_SHARED_CONDITIONAL_FALSE}"; then as_fn_error $? "conditional \"HAVE_SHARED_CONDITIONAL\" was never defined. Usually this means the macro was only invoked conditionally." "$LINENO" 5 @@ -31375,7 +32358,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1 # report actual input values of CONFIG_FILES etc. instead of their # values after options handling. ac_log=" -This file was extended by HDF5 $as_me 1.8.21, which was +This file was extended by HDF5 $as_me 1.8.22, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = $CONFIG_FILES @@ -31441,7 +32424,7 @@ _ACEOF cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1 ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`" ac_cs_version="\\ -HDF5 config.status 1.8.21 +HDF5 config.status 1.8.22 configured by $0, generated by GNU Autoconf 2.69, with options \\"\$ac_cs_config\\" @@ -32053,6 +33036,7 @@ do "test/testlinks_env.sh") CONFIG_FILES="$CONFIG_FILES test/testlinks_env.sh" ;; "test/test_plugin.sh") CONFIG_FILES="$CONFIG_FILES test/test_plugin.sh" ;; "testpar/Makefile") CONFIG_FILES="$CONFIG_FILES testpar/Makefile" ;; + "testpar/testpflush.sh") CONFIG_FILES="$CONFIG_FILES testpar/testpflush.sh" ;; "tools/Makefile") CONFIG_FILES="$CONFIG_FILES tools/Makefile" ;; "tools/h5dump/Makefile") CONFIG_FILES="$CONFIG_FILES tools/h5dump/Makefile" ;; "tools/h5dump/h5dump_plugin.sh") CONFIG_FILES="$CONFIG_FILES tools/h5dump/h5dump_plugin.sh" ;; @@ -32076,8 +33060,8 @@ do "tools/h5copy/Makefile") CONFIG_FILES="$CONFIG_FILES tools/h5copy/Makefile" ;; "tools/h5copy/testh5copy.sh") CONFIG_FILES="$CONFIG_FILES tools/h5copy/testh5copy.sh" ;; "tools/lib/Makefile") CONFIG_FILES="$CONFIG_FILES tools/lib/Makefile" ;; + "tools/libtest/Makefile") CONFIG_FILES="$CONFIG_FILES tools/libtest/Makefile" ;; "tools/misc/Makefile") CONFIG_FILES="$CONFIG_FILES tools/misc/Makefile" ;; - "tools/misc/h5cc") CONFIG_FILES="$CONFIG_FILES tools/misc/h5cc" ;; "tools/misc/testh5mkgrp.sh") CONFIG_FILES="$CONFIG_FILES tools/misc/testh5mkgrp.sh" ;; "tools/misc/testh5repart.sh") CONFIG_FILES="$CONFIG_FILES tools/misc/testh5repart.sh" ;; "tools/h5stat/testh5stat.sh") CONFIG_FILES="$CONFIG_FILES tools/h5stat/testh5stat.sh" ;; @@ -32086,6 +33070,8 @@ do "examples/Makefile") CONFIG_FILES="$CONFIG_FILES examples/Makefile" ;; "examples/run-c-ex.sh") CONFIG_FILES="$CONFIG_FILES examples/run-c-ex.sh" ;; "examples/testh5cc.sh") CONFIG_FILES="$CONFIG_FILES examples/testh5cc.sh" ;; + "bin/h5cc") CONFIG_FILES="$CONFIG_FILES bin/h5cc" ;; + "bin/Makefile") CONFIG_FILES="$CONFIG_FILES bin/Makefile" ;; "c++/Makefile") CONFIG_FILES="$CONFIG_FILES c++/Makefile" ;; "c++/src/Makefile") CONFIG_FILES="$CONFIG_FILES c++/src/Makefile" ;; "c++/src/h5c++") CONFIG_FILES="$CONFIG_FILES c++/src/h5c++" ;; @@ -33728,7 +34714,7 @@ $as_echo "$as_me: WARNING: unrecognized options: $ac_unrecognized_opts" >&2;} fi -chmod 755 tools/misc/h5cc +chmod 755 bin/h5cc if test "X$HDF_CXX" = "Xyes"; then chmod 755 c++/src/h5c++ fi @@ -33745,14 +34731,14 @@ if test "X$HDF_FORTRAN" = "Xyes"; then ;; esac - ### libtool does not pass the correct argument linking (-WL,-Wl,,) for the NAG Fortran compiler + ### libtool does not pass the correct argument linking (-Wl,-Wl,,) for the NAG Fortran compiler ### on Linux (other OSs have not been tested). ### Therefore, detect if we are using the NAG Fortran compiler, and replace the wl="-Wl," for Fortran to ### wl="-Wl,-Wl,," in the libtool file. (HDFFV-10037) case "`uname`" in Linux*) if test "X$FC_BASENAME" = "Xnagfor"; then - cat libtool | awk '/BEGIN LIBTOOL TAG CONFIG: FC/{flag=1}flag&&/wl=/{$NF="wl=\"-Wl,-Wl,,\"";flag=0}1' > libtool.tmp && mv -f libtool.tmp libtool && chmod 755 libtool + cat libtool | awk '/BEGIN LIBTOOL TAG CONFIG: FC/{flag=1}flag&&/wl=/{$NF="wl=\"-Wl,-Wl,,\"";flag=0}1' > libtool.tmp && mv -f libtool.tmp libtool && chmod 755 libtool fi ;; esac |