diff options
Diffstat (limited to 'c++')
121 files changed, 865 insertions, 715 deletions
diff --git a/c++/COPYING b/c++/COPYING deleted file mode 100644 index 6497ace..0000000 --- a/c++/COPYING +++ /dev/null @@ -1,13 +0,0 @@ - - Copyright by The HDF Group and - The Board of Trustees of the University of Illinois. - All rights reserved. - - The files and subdirectories in this directory are part of HDF5. - The full HDF5 copyright notice, including terms governing use, - modification, and redistribution, is contained in the COPYING file - which can be found at the root of the source code distribution tree - or in https://support.hdfgroup.org/ftp/HDF5/releases. If you do - not have access to either file, you may request a copy from - help@hdfgroup.org. - diff --git a/c++/Makefile.am b/c++/Makefile.am index 319ce6e..5d8258b 100644 --- a/c++/Makefile.am +++ b/c++/Makefile.am @@ -6,7 +6,7 @@ # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code -# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# distribution tree, or in https://www.hdfgroup.org/licenses. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. ## @@ -14,7 +14,7 @@ ## Run automake to generate a Makefile.in from this file. # # Top-level HDF5-C++ Makefile(.in) -# +# include $(top_srcdir)/config/commence.am diff --git a/c++/Makefile.in b/c++/Makefile.in index aa4076d..1145613 100644 --- a/c++/Makefile.in +++ b/c++/Makefile.in @@ -22,12 +22,12 @@ # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code -# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# distribution tree, or in https://www.hdfgroup.org/licenses. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. # # Top-level HDF5-C++ Makefile(.in) -# +# VPATH = @srcdir@ am__is_gnu_make = { \ if test -z '$(MAKELEVEL)'; then \ @@ -113,6 +113,7 @@ am__aclocal_m4_deps = $(top_srcdir)/m4/aclocal_cxx.m4 \ $(top_srcdir)/m4/ax_check_junit.m4 \ $(top_srcdir)/m4/ax_java_options.m4 \ $(top_srcdir)/m4/ax_jni_include_dir.m4 \ + $(top_srcdir)/m4/ax_prog_doxygen.m4 \ $(top_srcdir)/m4/ax_prog_jar.m4 \ $(top_srcdir)/m4/ax_prog_java.m4 \ $(top_srcdir)/m4/ax_prog_java_works.m4 \ @@ -386,7 +387,7 @@ am__set_b = \ esac am__DIST_COMMON = $(srcdir)/Makefile.in $(top_srcdir)/bin/test-driver \ $(top_srcdir)/config/commence.am \ - $(top_srcdir)/config/conclude.am COPYING + $(top_srcdir)/config/conclude.am DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST) am__relativize = \ dir0=`pwd`; \ @@ -419,7 +420,7 @@ AMTAR = @AMTAR@ # H5_CFLAGS holds flags that should be used when building hdf5, # but which should not be exported to h5cc for building other programs. -# AM_CFLAGS is an automake construct which should be used by Makefiles +# AM_CFLAGS is an automake construct which should be used by Makefiles # instead of CFLAGS, as CFLAGS is reserved solely for the user to define. # This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well. AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@ @@ -444,6 +445,7 @@ CC = @CC@ CCDEPMODE = @CCDEPMODE@ CC_VERSION = @CC_VERSION@ CFLAGS = @CFLAGS@ +CLANG_SANITIZE_CHECKS = @CLANG_SANITIZE_CHECKS@ CODESTACK = @CODESTACK@ CONFIG_DATE = @CONFIG_DATE@ CONFIG_MODE = @CONFIG_MODE@ @@ -460,11 +462,54 @@ DEFAULT_API_VERSION = @DEFAULT_API_VERSION@ DEFS = @DEFS@ DEPDIR = @DEPDIR@ DEPRECATED_SYMBOLS = @DEPRECATED_SYMBOLS@ -DEV_WARNINGS = @DEV_WARNINGS@ +DESIRED_FILE_LOCKING = @DESIRED_FILE_LOCKING@ +DIAGS = @DIAGS@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ +DOXYGEN_EXAMPLES_DIRECTORY = @DOXYGEN_EXAMPLES_DIRECTORY@ +DOXYGEN_EXTERNAL_SEARCH = @DOXYGEN_EXTERNAL_SEARCH@ +DOXYGEN_HTML_EXTRA_FILES = @DOXYGEN_HTML_EXTRA_FILES@ +DOXYGEN_HTML_EXTRA_STYLESHEET = @DOXYGEN_HTML_EXTRA_STYLESHEET@ +DOXYGEN_HTML_FOOTER = @DOXYGEN_HTML_FOOTER@ +DOXYGEN_HTML_HEADER = @DOXYGEN_HTML_HEADER@ +DOXYGEN_INCLUDE_ALIASES = @DOXYGEN_INCLUDE_ALIASES@ +DOXYGEN_INPUT_DIRECTORY = @DOXYGEN_INPUT_DIRECTORY@ +DOXYGEN_LAYOUT_FILE = @DOXYGEN_LAYOUT_FILE@ +DOXYGEN_MACRO_EXPANSION = @DOXYGEN_MACRO_EXPANSION@ +DOXYGEN_OPTIMIZE_OUTPUT_FOR_C = @DOXYGEN_OPTIMIZE_OUTPUT_FOR_C@ +DOXYGEN_OUTPUT_DIRECTORY = @DOXYGEN_OUTPUT_DIRECTORY@ +DOXYGEN_PACKAGE = @DOXYGEN_PACKAGE@ +DOXYGEN_PAPER_SIZE = @DOXYGEN_PAPER_SIZE@ +DOXYGEN_PROJECT_BRIEF = @DOXYGEN_PROJECT_BRIEF@ +DOXYGEN_PROJECT_LOGO = @DOXYGEN_PROJECT_LOGO@ +DOXYGEN_SEARCHENGINE_URL = @DOXYGEN_SEARCHENGINE_URL@ +DOXYGEN_SERVER_BASED_SEARCH = @DOXYGEN_SERVER_BASED_SEARCH@ +DOXYGEN_VERSION_STRING = @DOXYGEN_VERSION_STRING@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ +DX_CONFIG = @DX_CONFIG@ +DX_DOCDIR = @DX_DOCDIR@ +DX_DOT = @DX_DOT@ +DX_DOXYGEN = @DX_DOXYGEN@ +DX_DVIPS = @DX_DVIPS@ +DX_EGREP = @DX_EGREP@ +DX_ENV = @DX_ENV@ +DX_FLAG_chi = @DX_FLAG_chi@ +DX_FLAG_chm = @DX_FLAG_chm@ +DX_FLAG_doc = @DX_FLAG_doc@ +DX_FLAG_dot = @DX_FLAG_dot@ +DX_FLAG_html = @DX_FLAG_html@ +DX_FLAG_man = @DX_FLAG_man@ +DX_FLAG_pdf = @DX_FLAG_pdf@ +DX_FLAG_ps = @DX_FLAG_ps@ +DX_FLAG_rtf = @DX_FLAG_rtf@ +DX_FLAG_xml = @DX_FLAG_xml@ +DX_HHC = @DX_HHC@ +DX_LATEX = @DX_LATEX@ +DX_MAKEINDEX = @DX_MAKEINDEX@ +DX_PDFLATEX = @DX_PDFLATEX@ +DX_PERL = @DX_PERL@ +DX_PROJECT = @DX_PROJECT@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -498,6 +543,7 @@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ +H5_IS_DARWIN = @H5_IS_DARWIN@ H5_JAVACFLAGS = @H5_JAVACFLAGS@ H5_JAVAFLAGS = @H5_JAVAFLAGS@ H5_JNIFLAGS = @H5_JNIFLAGS@ @@ -508,6 +554,7 @@ HAVE_DMALLOC = @HAVE_DMALLOC@ HAVE_Fortran_INTEGER_SIZEOF_16 = @HAVE_Fortran_INTEGER_SIZEOF_16@ HAVE_LIBHDFS = @HAVE_LIBHDFS@ HAVE_PTHREAD = @HAVE_PTHREAD@ +HDF5_DOXYGEN = @HDF5_DOXYGEN@ HDF5_HL = @HDF5_HL@ HDF5_INTERFACES = @HDF5_INTERFACES@ HDF5_TESTS = @HDF5_TESTS@ @@ -520,6 +567,7 @@ HL = @HL@ HL_FOR = @HL_FOR@ HSIZE_T = @HSIZE_T@ HSSIZE_T = @HSSIZE_T@ +IGNORE_DISABLED_FILE_LOCKS = @IGNORE_DISABLED_FILE_LOCKS@ INSTALL = @INSTALL@ INSTALL_DATA = @INSTALL_DATA@ INSTALL_PROGRAM = @INSTALL_PROGRAM@ @@ -557,6 +605,7 @@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MAP_API = @MAP_API@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ +MIRROR_VFD = @MIRROR_VFD@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -593,6 +642,7 @@ PATH_SEPARATOR = @PATH_SEPARATOR@ PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ +RECURSIVE_RW_LOCKS = @RECURSIVE_RW_LOCKS@ ROOT = @ROOT@ ROS3_VFD = @ROS3_VFD@ RUNPARALLEL = @RUNPARALLEL@ @@ -616,6 +666,7 @@ TIME = @TIME@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ +USE_FILE_LOCKING = @USE_FILE_LOCKING@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ @@ -708,15 +759,15 @@ LIBH5_HL = $(top_builddir)/hl/src/libhdf5_hl.la LIBH5F_HL = $(top_builddir)/hl/fortran/src/libhdf5hl_fortran.la LIBH5CPP_HL = $(top_builddir)/hl/c++/src/libhdf5_hl_cpp.la -# Note that in svn revision 19400 the '/' after DESTDIR in H5* variables below -# has been removed. According to the official description of DESTDIR by Gnu at -# http://www.gnu.org/prep/standards/html_node/DESTDIR.html, DESTDIR is -# prepended to the normal and complete install path that it precedes for the -# purpose of installing in a temporary directory which is useful for building -# rpms and other packages. The '/' after ${DESTDIR} will be followed by another -# '/' at the beginning of the normal install path. When DESTDIR is empty the -# path then begins with '//', which is incorrect and causes problems at least for -# Cygwin. +# Note that in svn revision 19400 the '/' after DESTDIR in H5* variables below +# has been removed. According to the official description of DESTDIR by Gnu at +# http://www.gnu.org/prep/standards/html_node/DESTDIR.html, DESTDIR is +# prepended to the normal and complete install path that it precedes for the +# purpose of installing in a temporary directory which is useful for building +# rpms and other packages. The '/' after ${DESTDIR} will be followed by another +# '/' at the beginning of the normal install path. When DESTDIR is empty the +# path then begins with '//', which is incorrect and causes problems at least for +# Cygwin. # Scripts used to build examples # If only shared libraries have been installed, have h5cc build examples with @@ -758,7 +809,7 @@ LIB = $(lib_LIBRARIES) $(lib_LTLIBRARIES) $(noinst_LIBRARIES) \ PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS) \ $(EXTRA_PROG) -chk_TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) +chk_TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) TEST_EXTENSIONS = .sh SH_LOG_COMPILER = $(SHELL) AM_SH_LOG_FLAGS = @@ -1237,9 +1288,9 @@ uninstall-am: # commands that should be executed even if a file with the same name already # exists. .PHONY: build-check-clean build-check-p build-check-s build-lib build-progs \ - build-tests check-clean check-install check-p check-s check-vfd \ - check-passthrough-vol install-doc lib progs tests uninstall-doc \ - _exec_check-s _test help + build-tests check-clean check-install check-p check-s check-vfd \ + check-passthrough-vol install-doc lib progs tests uninstall-doc \ + _exec_check-s _test help trace doxygen help: @$(top_srcdir)/bin/makehelp diff --git a/c++/examples/CMakeLists.txt b/c++/examples/CMakeLists.txt index 890d22d..c50315f 100644 --- a/c++/examples/CMakeLists.txt +++ b/c++/examples/CMakeLists.txt @@ -34,38 +34,52 @@ set (tutr_examples foreach (example ${examples}) add_executable (cpp_ex_${example} ${HDF5_CPP_EXAMPLES_SOURCE_DIR}/${example}.cpp) - target_include_directories (cpp_ex_${example} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") + target_include_directories (cpp_ex_${example} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") if (NOT BUILD_SHARED_LIBS) TARGET_C_PROPERTIES (cpp_ex_${example} STATIC) target_link_libraries (cpp_ex_${example} PRIVATE ${HDF5_CPP_LIB_TARGET} ${HDF5_LIB_TARGET}) else () TARGET_C_PROPERTIES (cpp_ex_${example} SHARED) target_link_libraries (cpp_ex_${example} PRIVATE ${HDF5_CPP_LIBSH_TARGET} ${HDF5_LIBSH_TARGET}) - if (MINGW) + if (MINGW AND HDF5_MINGW_STATIC_GCC_LIBS) target_link_options (${HDF5_CPP_LIBSH_TARGET} PRIVATE -static-libgcc -static-libstdc++ ) endif () endif () set_target_properties (cpp_ex_${example} PROPERTIES FOLDER examples/cpp) + + #----------------------------------------------------------------------------- + # Add Target to clang-format + #----------------------------------------------------------------------------- + if (HDF5_ENABLE_FORMATTERS) + clang_format (HDF5_CPP_EXAMPLES_${example}_FORMAT cpp_ex_${example}) + endif () endforeach () foreach (example ${tutr_examples}) add_executable (cpp_ex_${example} ${HDF5_CPP_EXAMPLES_SOURCE_DIR}/${example}.cpp) - target_include_directories (cpp_ex_${example} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") + target_include_directories (cpp_ex_${example} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") if (NOT BUILD_SHARED_LIBS) TARGET_C_PROPERTIES (cpp_ex_${example} STATIC) target_link_libraries (cpp_ex_${example} PRIVATE ${HDF5_CPP_LIB_TARGET} ${HDF5_LIB_TARGET}) else () TARGET_C_PROPERTIES (cpp_ex_${example} SHARED) target_link_libraries (cpp_ex_${example} PRIVATE ${HDF5_CPP_LIBSH_TARGET} ${HDF5_LIBSH_TARGET}) - if (MINGW) + if (MINGW AND HDF5_MINGW_STATIC_GCC_LIBS) target_link_options (${HDF5_CPP_LIBSH_TARGET} PRIVATE -static-libgcc -static-libstdc++ ) endif () endif () set_target_properties (cpp_ex_${example} PROPERTIES FOLDER examples/cpp) + + #----------------------------------------------------------------------------- + # Add Target to clang-format + #----------------------------------------------------------------------------- + if (HDF5_ENABLE_FORMATTERS) + clang_format (HDF5_CPP_EXAMPLES_${example}_FORMAT cpp_ex_${example}) + endif () endforeach () if (BUILD_TESTING AND HDF5_TEST_CPP AND HDF5_TEST_EXAMPLES AND HDF5_TEST_SERIAL) diff --git a/c++/examples/CMakeTests.cmake b/c++/examples/CMakeTests.cmake index bbe3433..a7fc9b8 100644 --- a/c++/examples/CMakeTests.cmake +++ b/c++/examples/CMakeTests.cmake @@ -5,7 +5,7 @@ # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code -# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# distribution tree, or in https://www.hdfgroup.org/licenses. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. # diff --git a/c++/examples/Makefile.am b/c++/examples/Makefile.am index 0648504..a316e1b 100644 --- a/c++/examples/Makefile.am +++ b/c++/examples/Makefile.am @@ -6,7 +6,7 @@ # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code -# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# distribution tree, or in https://www.hdfgroup.org/licenses. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. ## @@ -49,8 +49,8 @@ CXX_API=yes # Where to install examples # Note: no '/' after DESTDIR. Explanation in commence.am -EXAMPLEDIR=$(examplesdir)/c++ -EXAMPLETOPDIR=$(examplesdir) +EXAMPLEDIR=${DESTDIR}$(examplesdir)/c++ +EXAMPLETOPDIR=${DESTDIR}$(examplesdir) # How to build programs using h5c++ $(EXTRA_PROG): $(H5CPP) diff --git a/c++/examples/Makefile.in b/c++/examples/Makefile.in index a9ca371..58af9ea 100644 --- a/c++/examples/Makefile.in +++ b/c++/examples/Makefile.in @@ -22,7 +22,7 @@ # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code -# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# distribution tree, or in https://www.hdfgroup.org/licenses. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. # @@ -117,6 +117,7 @@ am__aclocal_m4_deps = $(top_srcdir)/m4/aclocal_cxx.m4 \ $(top_srcdir)/m4/ax_check_junit.m4 \ $(top_srcdir)/m4/ax_java_options.m4 \ $(top_srcdir)/m4/ax_jni_include_dir.m4 \ + $(top_srcdir)/m4/ax_prog_doxygen.m4 \ $(top_srcdir)/m4/ax_prog_jar.m4 \ $(top_srcdir)/m4/ax_prog_java.m4 \ $(top_srcdir)/m4/ax_prog_java_works.m4 \ @@ -367,7 +368,7 @@ AMTAR = @AMTAR@ # H5_CFLAGS holds flags that should be used when building hdf5, # but which should not be exported to h5cc for building other programs. -# AM_CFLAGS is an automake construct which should be used by Makefiles +# AM_CFLAGS is an automake construct which should be used by Makefiles # instead of CFLAGS, as CFLAGS is reserved solely for the user to define. # This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well. AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@ @@ -392,6 +393,7 @@ CC = @CC@ CCDEPMODE = @CCDEPMODE@ CC_VERSION = @CC_VERSION@ CFLAGS = @CFLAGS@ +CLANG_SANITIZE_CHECKS = @CLANG_SANITIZE_CHECKS@ CODESTACK = @CODESTACK@ CONFIG_DATE = @CONFIG_DATE@ CONFIG_MODE = @CONFIG_MODE@ @@ -408,11 +410,54 @@ DEFAULT_API_VERSION = @DEFAULT_API_VERSION@ DEFS = @DEFS@ DEPDIR = @DEPDIR@ DEPRECATED_SYMBOLS = @DEPRECATED_SYMBOLS@ -DEV_WARNINGS = @DEV_WARNINGS@ +DESIRED_FILE_LOCKING = @DESIRED_FILE_LOCKING@ +DIAGS = @DIAGS@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ +DOXYGEN_EXAMPLES_DIRECTORY = @DOXYGEN_EXAMPLES_DIRECTORY@ +DOXYGEN_EXTERNAL_SEARCH = @DOXYGEN_EXTERNAL_SEARCH@ +DOXYGEN_HTML_EXTRA_FILES = @DOXYGEN_HTML_EXTRA_FILES@ +DOXYGEN_HTML_EXTRA_STYLESHEET = @DOXYGEN_HTML_EXTRA_STYLESHEET@ +DOXYGEN_HTML_FOOTER = @DOXYGEN_HTML_FOOTER@ +DOXYGEN_HTML_HEADER = @DOXYGEN_HTML_HEADER@ +DOXYGEN_INCLUDE_ALIASES = @DOXYGEN_INCLUDE_ALIASES@ +DOXYGEN_INPUT_DIRECTORY = @DOXYGEN_INPUT_DIRECTORY@ +DOXYGEN_LAYOUT_FILE = @DOXYGEN_LAYOUT_FILE@ +DOXYGEN_MACRO_EXPANSION = @DOXYGEN_MACRO_EXPANSION@ +DOXYGEN_OPTIMIZE_OUTPUT_FOR_C = @DOXYGEN_OPTIMIZE_OUTPUT_FOR_C@ +DOXYGEN_OUTPUT_DIRECTORY = @DOXYGEN_OUTPUT_DIRECTORY@ +DOXYGEN_PACKAGE = @DOXYGEN_PACKAGE@ +DOXYGEN_PAPER_SIZE = @DOXYGEN_PAPER_SIZE@ +DOXYGEN_PROJECT_BRIEF = @DOXYGEN_PROJECT_BRIEF@ +DOXYGEN_PROJECT_LOGO = @DOXYGEN_PROJECT_LOGO@ +DOXYGEN_SEARCHENGINE_URL = @DOXYGEN_SEARCHENGINE_URL@ +DOXYGEN_SERVER_BASED_SEARCH = @DOXYGEN_SERVER_BASED_SEARCH@ +DOXYGEN_VERSION_STRING = @DOXYGEN_VERSION_STRING@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ +DX_CONFIG = @DX_CONFIG@ +DX_DOCDIR = @DX_DOCDIR@ +DX_DOT = @DX_DOT@ +DX_DOXYGEN = @DX_DOXYGEN@ +DX_DVIPS = @DX_DVIPS@ +DX_EGREP = @DX_EGREP@ +DX_ENV = @DX_ENV@ +DX_FLAG_chi = @DX_FLAG_chi@ +DX_FLAG_chm = @DX_FLAG_chm@ +DX_FLAG_doc = @DX_FLAG_doc@ +DX_FLAG_dot = @DX_FLAG_dot@ +DX_FLAG_html = @DX_FLAG_html@ +DX_FLAG_man = @DX_FLAG_man@ +DX_FLAG_pdf = @DX_FLAG_pdf@ +DX_FLAG_ps = @DX_FLAG_ps@ +DX_FLAG_rtf = @DX_FLAG_rtf@ +DX_FLAG_xml = @DX_FLAG_xml@ +DX_HHC = @DX_HHC@ +DX_LATEX = @DX_LATEX@ +DX_MAKEINDEX = @DX_MAKEINDEX@ +DX_PDFLATEX = @DX_PDFLATEX@ +DX_PERL = @DX_PERL@ +DX_PROJECT = @DX_PROJECT@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -446,6 +491,7 @@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ +H5_IS_DARWIN = @H5_IS_DARWIN@ H5_JAVACFLAGS = @H5_JAVACFLAGS@ H5_JAVAFLAGS = @H5_JAVAFLAGS@ H5_JNIFLAGS = @H5_JNIFLAGS@ @@ -456,6 +502,7 @@ HAVE_DMALLOC = @HAVE_DMALLOC@ HAVE_Fortran_INTEGER_SIZEOF_16 = @HAVE_Fortran_INTEGER_SIZEOF_16@ HAVE_LIBHDFS = @HAVE_LIBHDFS@ HAVE_PTHREAD = @HAVE_PTHREAD@ +HDF5_DOXYGEN = @HDF5_DOXYGEN@ HDF5_HL = @HDF5_HL@ HDF5_INTERFACES = @HDF5_INTERFACES@ HDF5_TESTS = @HDF5_TESTS@ @@ -468,6 +515,7 @@ HL = @HL@ HL_FOR = @HL_FOR@ HSIZE_T = @HSIZE_T@ HSSIZE_T = @HSSIZE_T@ +IGNORE_DISABLED_FILE_LOCKS = @IGNORE_DISABLED_FILE_LOCKS@ INSTALL = @INSTALL@ INSTALL_DATA = @INSTALL_DATA@ INSTALL_PROGRAM = @INSTALL_PROGRAM@ @@ -505,6 +553,7 @@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MAP_API = @MAP_API@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ +MIRROR_VFD = @MIRROR_VFD@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -541,6 +590,7 @@ PATH_SEPARATOR = @PATH_SEPARATOR@ PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ +RECURSIVE_RW_LOCKS = @RECURSIVE_RW_LOCKS@ ROOT = @ROOT@ ROS3_VFD = @ROS3_VFD@ RUNPARALLEL = @RUNPARALLEL@ @@ -564,6 +614,7 @@ TIME = @TIME@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ +USE_FILE_LOCKING = @USE_FILE_LOCKING@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ @@ -656,15 +707,15 @@ LIBH5_HL = $(top_builddir)/hl/src/libhdf5_hl.la LIBH5F_HL = $(top_builddir)/hl/fortran/src/libhdf5hl_fortran.la LIBH5CPP_HL = $(top_builddir)/hl/c++/src/libhdf5_hl_cpp.la -# Note that in svn revision 19400 the '/' after DESTDIR in H5* variables below -# has been removed. According to the official description of DESTDIR by Gnu at -# http://www.gnu.org/prep/standards/html_node/DESTDIR.html, DESTDIR is -# prepended to the normal and complete install path that it precedes for the -# purpose of installing in a temporary directory which is useful for building -# rpms and other packages. The '/' after ${DESTDIR} will be followed by another -# '/' at the beginning of the normal install path. When DESTDIR is empty the -# path then begins with '//', which is incorrect and causes problems at least for -# Cygwin. +# Note that in svn revision 19400 the '/' after DESTDIR in H5* variables below +# has been removed. According to the official description of DESTDIR by Gnu at +# http://www.gnu.org/prep/standards/html_node/DESTDIR.html, DESTDIR is +# prepended to the normal and complete install path that it precedes for the +# purpose of installing in a temporary directory which is useful for building +# rpms and other packages. The '/' after ${DESTDIR} will be followed by another +# '/' at the beginning of the normal install path. When DESTDIR is empty the +# path then begins with '//', which is incorrect and causes problems at least for +# Cygwin. # Scripts used to build examples # If only shared libraries have been installed, have h5cc build examples with @@ -709,8 +760,8 @@ CXX_API = yes # Where to install examples # Note: no '/' after DESTDIR. Explanation in commence.am -EXAMPLEDIR = $(examplesdir)/c++ -EXAMPLETOPDIR = $(examplesdir) +EXAMPLEDIR = ${DESTDIR}$(examplesdir)/c++ +EXAMPLETOPDIR = ${DESTDIR}$(examplesdir) # Assume that all tests in this directory are examples, and tell # conclude.am when to build them. @@ -731,7 +782,7 @@ LIB = $(lib_LIBRARIES) $(lib_LTLIBRARIES) $(noinst_LIBRARIES) \ PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS) \ $(EXTRA_PROG) -chk_TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) +chk_TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) TEST_EXTENSIONS = .sh SH_LOG_COMPILER = $(SHELL) AM_SH_LOG_FLAGS = @@ -1097,9 +1148,9 @@ uninstall-am: uninstall-local # commands that should be executed even if a file with the same name already # exists. .PHONY: build-check-clean build-check-p build-check-s build-lib build-progs \ - build-tests check-clean check-install check-p check-s check-vfd \ - check-passthrough-vol install-doc lib progs tests uninstall-doc \ - _exec_check-s _test help + build-tests check-clean check-install check-p check-s check-vfd \ + check-passthrough-vol install-doc lib progs tests uninstall-doc \ + _exec_check-s _test help trace doxygen help: @$(top_srcdir)/bin/makehelp @@ -1150,7 +1201,7 @@ install-data-local: uninstall-local: @$(MAKE) $(AM_MAKEFLAGS) uninstall-examples -install-examples: $(EXAMPLEDIR) $(INSTALL_FILES) +install-examples: $(EXAMPLEDIR) $(INSTALL_FILES) @for f in X $(INSTALL_FILES); do \ if test $$f != X; then \ (set -x; $(INSTALL) $(srcdir)/$$f $(EXAMPLEDIR)/. || exit 1); \ @@ -1197,7 +1248,7 @@ installcheck-local: H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \ else \ $(MAKE) $(AM_MAKEFLAGS) check; \ - fi + fi @if test "$(INSTALL_FILES)" -a $(TEST_EXAMPLES_SCRIPT) -a -d $(EXAMPLEDIR); then \ echo "============================"; \ echo "Testing $(TEST_EXAMPLES_SCRIPT)"; \ diff --git a/c++/examples/chunks.cpp b/c++/examples/chunks.cpp index fdcb6d3..3717fcb 100644 --- a/c++/examples/chunks.cpp +++ b/c++/examples/chunks.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -16,11 +16,7 @@ * We will read from the file created by extend.cpp */ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cout; using std::endl; diff --git a/c++/examples/compound.cpp b/c++/examples/compound.cpp index 45b001e..8975845 100644 --- a/c++/examples/compound.cpp +++ b/c++/examples/compound.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -17,11 +17,7 @@ * and read back fields' subsets. */ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cout; using std::endl; diff --git a/c++/examples/create.cpp b/c++/examples/create.cpp index 968c897..e55230f 100644 --- a/c++/examples/create.cpp +++ b/c++/examples/create.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -15,11 +15,7 @@ * This example writes a dataset to a new HDF5 file. */ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif #include <string> #include "H5Cpp.h" diff --git a/c++/examples/extend_ds.cpp b/c++/examples/extend_ds.cpp index 9145088..24f5f3e 100644 --- a/c++/examples/extend_ds.cpp +++ b/c++/examples/extend_ds.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -18,11 +18,7 @@ * */ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif #include <string> using std::cout; diff --git a/c++/examples/h5group.cpp b/c++/examples/h5group.cpp index 3d2c6d9..f9ec176 100644 --- a/c++/examples/h5group.cpp +++ b/c++/examples/h5group.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -20,11 +20,7 @@ * the C version is used in this example. */ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cout; using std::endl; diff --git a/c++/examples/h5tutr_cmprss.cpp b/c++/examples/h5tutr_cmprss.cpp index 23a7aba..7c55709 100644 --- a/c++/examples/h5tutr_cmprss.cpp +++ b/c++/examples/h5tutr_cmprss.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/examples/h5tutr_crtatt.cpp b/c++/examples/h5tutr_crtatt.cpp index fdedadf..76a4730 100644 --- a/c++/examples/h5tutr_crtatt.cpp +++ b/c++/examples/h5tutr_crtatt.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/examples/h5tutr_crtdat.cpp b/c++/examples/h5tutr_crtdat.cpp index aef78d9..93a245c 100644 --- a/c++/examples/h5tutr_crtdat.cpp +++ b/c++/examples/h5tutr_crtdat.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/examples/h5tutr_crtgrp.cpp b/c++/examples/h5tutr_crtgrp.cpp index 8e48eec..45d1929 100644 --- a/c++/examples/h5tutr_crtgrp.cpp +++ b/c++/examples/h5tutr_crtgrp.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/examples/h5tutr_crtgrpar.cpp b/c++/examples/h5tutr_crtgrpar.cpp index 3414cee..7c7bab5c 100644 --- a/c++/examples/h5tutr_crtgrpar.cpp +++ b/c++/examples/h5tutr_crtgrpar.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/examples/h5tutr_crtgrpd.cpp b/c++/examples/h5tutr_crtgrpd.cpp index 8ada706..14b45c0 100644 --- a/c++/examples/h5tutr_crtgrpd.cpp +++ b/c++/examples/h5tutr_crtgrpd.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/examples/h5tutr_extend.cpp b/c++/examples/h5tutr_extend.cpp index 71a8ffb..bd7e9a5 100644 --- a/c++/examples/h5tutr_extend.cpp +++ b/c++/examples/h5tutr_extend.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/examples/h5tutr_rdwt.cpp b/c++/examples/h5tutr_rdwt.cpp index 4d265cd..3e1ee82 100644 --- a/c++/examples/h5tutr_rdwt.cpp +++ b/c++/examples/h5tutr_rdwt.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/examples/h5tutr_subset.cpp b/c++/examples/h5tutr_subset.cpp index d4b77c3..5c62c89 100644 --- a/c++/examples/h5tutr_subset.cpp +++ b/c++/examples/h5tutr_subset.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/examples/readdata.cpp b/c++/examples/readdata.cpp index e088cce..e247a8e 100644 --- a/c++/examples/readdata.cpp +++ b/c++/examples/readdata.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -17,11 +17,7 @@ // information about the dataset in the SDS.h5 file is obtained. // -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cout; using std::endl; diff --git a/c++/examples/run-c++-ex.sh.in b/c++/examples/run-c++-ex.sh.in index 03e1eac..a593d6c 100644 --- a/c++/examples/run-c++-ex.sh.in +++ b/c++/examples/run-c++-ex.sh.in @@ -6,7 +6,7 @@ # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code -# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# distribution tree, or in https://www.hdfgroup.org/licenses. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. @@ -141,5 +141,5 @@ rm *.o rm *.h5 echo -exit $EXIT_VALUE +exit $EXIT_VALUE diff --git a/c++/examples/testh5c++.sh.in b/c++/examples/testh5c++.sh.in index 907a980..44dc9e7 100644 --- a/c++/examples/testh5c++.sh.in +++ b/c++/examples/testh5c++.sh.in @@ -7,7 +7,7 @@ # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code -# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# distribution tree, or in https://www.hdfgroup.org/licenses. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. # @@ -67,11 +67,7 @@ temp_FILES="a.out $applib" cat > $appmain <<EOF #include <string> -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif #include "H5Cpp.h" @@ -95,19 +91,11 @@ EOF # generate prog1 cat > $prog1 <<EOF -#ifdef OLD_HEADER_FILENAME - #include <iostream.h> -#else - #include <iostream> -#endif +#include <iostream> #include <string> -#ifndef H5_NO_NAMESPACE -#ifndef H5_NO_STD - using std::cout; - using std::endl; -#endif // H5_NO_STD -#endif +using std::cout; +using std::endl; int sub1(void) { cout << "in sub1" << endl; @@ -117,19 +105,11 @@ EOF # generate prog2 cat > $prog2 <<EOF -#ifdef OLD_HEADER_FILENAME - #include <iostream.h> -#else - #include <iostream> -#endif +#include <iostream> #include <string> -#ifndef H5_NO_NAMESPACE -#ifndef H5_NO_STD - using std::cout; - using std::endl; -#endif // H5_NO_STD -#endif +using std::cout; +using std::endl; int sub2(void) { cout << "in sub2" << endl; @@ -142,11 +122,7 @@ EOF cat > $hdf5main <<EOF #include <string> -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif #include "H5Cpp.h" diff --git a/c++/examples/writedata.cpp b/c++/examples/writedata.cpp index 61cd43a..f2b715a 100644 --- a/c++/examples/writedata.cpp +++ b/c++/examples/writedata.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -20,11 +20,7 @@ * file is closed. Program reopens the file and reads and displays the result. */ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cout; using std::endl; diff --git a/c++/src/CMakeLists.txt b/c++/src/CMakeLists.txt index 39f0f3a..835d422 100644 --- a/c++/src/CMakeLists.txt +++ b/c++/src/CMakeLists.txt @@ -5,7 +5,7 @@ project (HDF5_CPP_SRC CXX) # Generate configure file #----------------------------------------------------------------------------- configure_file (${HDF_RESOURCES_DIR}/H5cxx_config.h.in - ${HDF5_BINARY_DIR}/H5cxx_pubconf.h + ${HDF5_SRC_BINARY_DIR}/H5cxx_pubconf.h ) #----------------------------------------------------------------------------- @@ -87,9 +87,10 @@ set (CPP_HDRS if (NOT ONLY_SHARED_LIBS) add_library (${HDF5_CPP_LIB_TARGET} STATIC ${CPP_SOURCES} ${CPP_HDRS}) target_include_directories (${HDF5_CPP_LIB_TARGET} - PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>" + PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>" INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>" ) + target_compile_options(${HDF5_CPP_LIB_TARGET} PRIVATE "${HDF5_CMAKE_CXX_FLAGS}") target_compile_definitions(${HDF5_CPP_LIB_TARGET} PRIVATE $<$<BOOL:${HDF5_ENABLE_PARALLEL}>:MPICH_SKIP_MPICXX;MPICH_IGNORE_CXX_SEEK># Parallel/MPI, prevent spurious cpp/cxx warnings ) @@ -104,9 +105,10 @@ endif () if (BUILD_SHARED_LIBS) add_library (${HDF5_CPP_LIBSH_TARGET} SHARED ${CPP_SOURCES} ${CPP_HDRS}) target_include_directories (${HDF5_CPP_LIBSH_TARGET} - PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>" + PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>" INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>" ) + target_compile_options(${HDF5_CPP_LIBSH_TARGET} PRIVATE "${HDF5_CMAKE_CXX_FLAGS}") target_compile_definitions(${HDF5_CPP_LIBSH_TARGET} PUBLIC "H5_BUILT_AS_DYNAMIC_LIB" PRIVATE $<$<BOOL:${HDF5_ENABLE_PARALLEL}>:MPICH_SKIP_MPICXX;MPICH_IGNORE_CXX_SEEK># Parallel/MPI, prevent spurious cpp/cxx warnings @@ -115,7 +117,7 @@ if (BUILD_SHARED_LIBS) target_link_libraries (${HDF5_CPP_LIBSH_TARGET} PUBLIC ${HDF5_LIBSH_TARGET} ) - if (MINGW) + if (MINGW AND HDF5_MINGW_STATIC_GCC_LIBS) target_link_options (${HDF5_CPP_LIBSH_TARGET} PRIVATE -static-libgcc -static-libstdc++ ) @@ -127,6 +129,17 @@ if (BUILD_SHARED_LIBS) endif () #----------------------------------------------------------------------------- +# Add Target to clang-format +#----------------------------------------------------------------------------- +if (HDF5_ENABLE_FORMATTERS) + if (NOT ONLY_SHARED_LIBS) + clang_format (HDF5_CPP_SRC_FORMAT ${HDF5_CPP_LIB_TARGET}) + else () + clang_format (HDF5_CPP_SRC_FORMAT ${HDF5_CPP_LIBSH_TARGET}) + endif () +endif () + +#----------------------------------------------------------------------------- # Add file(s) to CMake Install #----------------------------------------------------------------------------- install ( @@ -181,22 +194,26 @@ if (BUILD_SHARED_LIBS) set (_PKG_CONFIG_SH_LIBS "${_PKG_CONFIG_SH_LIBS} -l${HDF5_CPP_LIB_CORENAME}") endif () -set (_PKG_CONFIG_REQUIRES "${HDF5_LIB_CORENAME}") -set (_PKG_CONFIG_REQUIRES_PRIVATE "${HDF5_LIB_CORENAME}") +set (_PKG_CONFIG_REQUIRES "${HDF5_LIB_CORENAME}-${HDF5_PACKAGE_VERSION}") +set (_PKG_CONFIG_REQUIRES_PRIVATE "${HDF5_LIB_CORENAME}-${HDF5_PACKAGE_VERSION}") configure_file ( - ${HDF_RESOURCES_DIR}/libhdf5.pc.in - ${HDF5_BINARY_DIR}/CMakeFiles/${HDF5_CPP_LIB_CORENAME}-${HDF5_PACKAGE_VERSION}.pc + ${HDF_CONFIG_DIR}/libhdf5.pc.in + ${HDF5_BINARY_DIR}/CMakeFiles/${HDF5_CPP_LIB_CORENAME}.pc @ONLY ) install ( - FILES ${HDF5_BINARY_DIR}/CMakeFiles/${HDF5_CPP_LIB_CORENAME}-${HDF5_PACKAGE_VERSION}.pc + FILES ${HDF5_BINARY_DIR}/CMakeFiles/${HDF5_CPP_LIB_CORENAME}.pc DESTINATION ${HDF5_INSTALL_LIB_DIR}/pkgconfig COMPONENT cpplibraries ) if (NOT WIN32 AND NOT MINGW) - set (_PKG_CONFIG_COMPILER ${CMAKE_CXX_COMPILER}) + if (HDF5_ENABLE_PARALLEL AND MPI_CXX_FOUND) + set (_PKG_CONFIG_COMPILER ${MPI_CXX_COMPILER}) + else () + set (_PKG_CONFIG_COMPILER ${CMAKE_CXX_COMPILER}) + endif () configure_file ( ${HDF_RESOURCES_DIR}/libh5cc.in ${HDF5_BINARY_DIR}/CMakeFiles/h5c++ diff --git a/c++/src/H5AbstractDs.cpp b/c++/src/H5AbstractDs.cpp index 77d9248..eeb0155 100644 --- a/c++/src/H5AbstractDs.cpp +++ b/c++/src/H5AbstractDs.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5AbstractDs.h b/c++/src/H5AbstractDs.h index 0c66845..b84867b 100644 --- a/c++/src/H5AbstractDs.h +++ b/c++/src/H5AbstractDs.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __AbstractDs_H -#define __AbstractDs_H +#ifndef H5AbstractDs_H +#define H5AbstractDs_H namespace H5 { @@ -81,4 +81,4 @@ class H5_DLLCPP AbstractDs { }; // end of AbstractDs } // namespace H5 -#endif // __AbstractDs_H +#endif // H5AbstractDs_H diff --git a/c++/src/H5Alltypes.h b/c++/src/H5Alltypes.h index d67f3fe..7a14774 100644 --- a/c++/src/H5Alltypes.h +++ b/c++/src/H5Alltypes.h @@ -7,7 +7,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5ArrayType.cpp b/c++/src/H5ArrayType.cpp index a567f8b..6999f1b 100644 --- a/c++/src/H5ArrayType.cpp +++ b/c++/src/H5ArrayType.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5ArrayType.h b/c++/src/H5ArrayType.h index 09f1592..4302352 100644 --- a/c++/src/H5ArrayType.h +++ b/c++/src/H5ArrayType.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5ArrayType_H -#define __H5ArrayType_H +#ifndef H5ArrayType_H +#define H5ArrayType_H namespace H5 { @@ -69,4 +69,4 @@ class H5_DLLCPP ArrayType : public DataType { }; // end of ArrayType } // namespace H5 -#endif // __H5ArrayType_H +#endif // H5ArrayType_H diff --git a/c++/src/H5AtomType.cpp b/c++/src/H5AtomType.cpp index 167b3d1..0b48046 100644 --- a/c++/src/H5AtomType.cpp +++ b/c++/src/H5AtomType.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5AtomType.h b/c++/src/H5AtomType.h index 337aca6..84da5e9 100644 --- a/c++/src/H5AtomType.h +++ b/c++/src/H5AtomType.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5AtomType_H -#define __H5AtomType_H +#ifndef H5AtomType_H +#define H5AtomType_H namespace H5 { @@ -83,4 +83,4 @@ class H5_DLLCPP AtomType : public DataType { }; // end of AtomType } // namespace H5 -#endif // __H5AtomType_H +#endif // H5AtomType_H diff --git a/c++/src/H5Attribute.cpp b/c++/src/H5Attribute.cpp index 1137eb8..0e37c2b 100644 --- a/c++/src/H5Attribute.cpp +++ b/c++/src/H5Attribute.cpp @@ -6,16 +6,12 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif #include <string> #include "H5private.h" // for HDfree @@ -41,7 +37,7 @@ namespace H5 { using std::cerr; using std::endl; -class H5_DLLCPP H5Object; // forward declaration for UserData4Aiterate +class H5Object; // forward declaration for UserData4Aiterate //-------------------------------------------------------------------------- // Function: Attribute default constructor @@ -314,7 +310,7 @@ Attribute::getName(char *attr_name, size_t buf_size) const H5std_string Attribute::getName() const { - H5std_string attr_name(""); // attribute name to return + H5std_string attr_name; // attribute name to return // Preliminary call to get the size of the attribute name ssize_t name_size = H5Aget_name(id, static_cast<size_t>(0), NULL); diff --git a/c++/src/H5Attribute.h b/c++/src/H5Attribute.h index 8783c00..41e5a31 100644 --- a/c++/src/H5Attribute.h +++ b/c++/src/H5Attribute.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5Attribute_H -#define __H5Attribute_H +#ifndef H5Attribute_H +#define H5Attribute_H namespace H5 { @@ -104,4 +104,4 @@ class H5_DLLCPP Attribute : public AbstractDs, public H5Location { }; // end of Attribute } // namespace H5 -#endif // __H5Attribute_H +#endif // H5Attribute_H diff --git a/c++/src/H5Classes.h b/c++/src/H5Classes.h index 618b46c..7820ce2 100644 --- a/c++/src/H5Classes.h +++ b/c++/src/H5Classes.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5Classes_H -#define __H5Classes_H +#ifndef H5Classes_H +#define H5Classes_H namespace H5 { class Exception; @@ -43,4 +43,4 @@ class H5File; class Attribute; class H5Library; } // namespace H5 -#endif // __H5Classes_H +#endif // H5Classes_H diff --git a/c++/src/H5CommonFG.cpp b/c++/src/H5CommonFG.cpp index 52f9175..fb602d9 100644 --- a/c++/src/H5CommonFG.cpp +++ b/c++/src/H5CommonFG.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5CommonFG.h b/c++/src/H5CommonFG.h index c3aef41..d87f9ca 100644 --- a/c++/src/H5CommonFG.h +++ b/c++/src/H5CommonFG.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __CommonFG_H -#define __CommonFG_H +#ifndef H5CommonFG_H +#define H5CommonFG_H namespace H5 { @@ -83,7 +83,7 @@ class H5_DLLCPP CommonFG { }; // end of CommonFG } // namespace H5 -#endif // __CommonFG_H +#endif // H5CommonFG_H /*************************************************************************** Design Note diff --git a/c++/src/H5CompType.cpp b/c++/src/H5CompType.cpp index 5eb030c..3b38c6d 100644 --- a/c++/src/H5CompType.cpp +++ b/c++/src/H5CompType.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5CompType.h b/c++/src/H5CompType.h index 66392d9..6a4c093 100644 --- a/c++/src/H5CompType.h +++ b/c++/src/H5CompType.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5CompType_H -#define __H5CompType_H +#ifndef H5CompType_H +#define H5CompType_H namespace H5 { @@ -124,4 +124,4 @@ class H5_DLLCPP CompType : public DataType { }; // end of CompType } // namespace H5 -#endif // __H5CompType_H +#endif // H5CompType_H diff --git a/c++/src/H5Cpp.h b/c++/src/H5Cpp.h index e614d69..9272bdb 100644 --- a/c++/src/H5Cpp.h +++ b/c++/src/H5Cpp.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5Cpp_H -#define __H5Cpp_H +#ifndef H5Cpp_H +#define H5Cpp_H #include "H5Include.h" #include "H5Exception.h" @@ -58,4 +58,4 @@ #define HOFFSET(TYPE, MEMBER) ((size_t) & ((TYPE *)0)->MEMBER) #endif -#endif // __H5Cpp_H +#endif // H5Cpp_H diff --git a/c++/src/H5CppDoc.h b/c++/src/H5CppDoc.h index 1108181..4337a6f 100644 --- a/c++/src/H5CppDoc.h +++ b/c++/src/H5CppDoc.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5CppDoc_H -#define __H5CppDoc_H +#ifndef H5CppDoc_H +#define H5CppDoc_H //------------------------------------------------------------------------- // The following section will be used to generate the 'Mainpage' @@ -92,4 +92,4 @@ /// This example shows how to work with groups. ///\example h5group.cpp -#endif // __H5CppDoc_H +#endif // H5CppDoc_H diff --git a/c++/src/H5DaccProp.cpp b/c++/src/H5DaccProp.cpp index 0a203d2..35c071a 100644 --- a/c++/src/H5DaccProp.cpp +++ b/c++/src/H5DaccProp.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5DaccProp.h b/c++/src/H5DaccProp.h index a467fac..7d6b250 100644 --- a/c++/src/H5DaccProp.h +++ b/c++/src/H5DaccProp.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5DSetAccPropList_H -#define __H5DSetAccPropList_H +#ifndef H5DSetAccPropList_H +#define H5DSetAccPropList_H namespace H5 { @@ -69,4 +69,4 @@ class H5_DLLCPP DSetAccPropList : public LinkAccPropList { }; // end of DSetAccPropList } // namespace H5 -#endif // __H5DSetAccPropList_H +#endif // H5DSetAccPropList_H diff --git a/c++/src/H5DataSet.cpp b/c++/src/H5DataSet.cpp index 607f88b..47031db 100644 --- a/c++/src/H5DataSet.cpp +++ b/c++/src/H5DataSet.cpp @@ -6,16 +6,12 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif #include <string> #include "H5private.h" // for HDfree @@ -46,7 +42,6 @@ using std::endl; //-------------------------------------------------------------------------- // Function: DataSet default constructor ///\brief Default constructor: creates a stub DataSet. -// Programmer Binh-Minh Ribler - 2000 //-------------------------------------------------------------------------- DataSet::DataSet() : H5Object(), AbstractDs(), id(H5I_INVALID_HID) { @@ -56,7 +51,6 @@ DataSet::DataSet() : H5Object(), AbstractDs(), id(H5I_INVALID_HID) // Function: DataSet overloaded constructor ///\brief Creates an DataSet object using the id of an existing dataset. ///\param existing_id - IN: Id of an existing dataset -// Programmer Binh-Minh Ribler - 2000 // Description // incRefCount() is needed here to prevent the id from being closed // prematurely. That is, when application uses the id of an @@ -73,7 +67,6 @@ DataSet::DataSet(const hid_t existing_id) : H5Object(), AbstractDs(), id(existin // Function: DataSet copy constructor ///\brief Copy constructor: same HDF5 object as \a original ///\param original - IN: DataSet instance to copy -// Programmer Binh-Minh Ribler - 2000 //-------------------------------------------------------------------------- DataSet::DataSet(const DataSet &original) : H5Object(), AbstractDs(), id(original.id) { @@ -81,6 +74,20 @@ DataSet::DataSet(const DataSet &original) : H5Object(), AbstractDs(), id(origina } //-------------------------------------------------------------------------- +// Function: DataSet assignment operator +///\brief Assignment operator: same HDF5 object as \a original +///\param original - IN: DataSet instance to copy +//-------------------------------------------------------------------------- +DataSet & +DataSet::operator=(const DataSet &original) +{ + if (this != &original) { + setId(original.id); + } + return (*this); +} + +//-------------------------------------------------------------------------- // Function: DataSet overload constructor - dereference ///\brief Given a reference, ref, to an hdf5 location, creates a /// DataSet object @@ -93,7 +100,6 @@ DataSet::DataSet(const DataSet &original) : H5Object(), AbstractDs(), id(origina ///\par Description /// \c loc can be DataSet, Group, H5File, or named DataType, that /// is a datatype that has been named by DataType::commit. -// Programmer Binh-Minh Ribler - Oct, 2006 //-------------------------------------------------------------------------- DataSet::DataSet(const H5Location &loc, const void *ref, H5R_type_t ref_type, const PropList &plist) : H5Object(), AbstractDs(), id(H5I_INVALID_HID) @@ -110,7 +116,6 @@ DataSet::DataSet(const H5Location &loc, const void *ref, H5R_type_t ref_type, co ///\param ref_type - IN: Reference type - default to H5R_OBJECT ///\param plist - IN: Property list - default to PropList::DEFAULT ///\exception H5::ReferenceException -// Programmer Binh-Minh Ribler - Oct, 2006 //-------------------------------------------------------------------------- DataSet::DataSet(const Attribute &attr, const void *ref, H5R_type_t ref_type, const PropList &plist) : H5Object(), AbstractDs(), id(H5I_INVALID_HID) @@ -123,7 +128,6 @@ DataSet::DataSet(const Attribute &attr, const void *ref, H5R_type_t ref_type, co ///\brief Gets a copy of the dataspace of this dataset. ///\return DataSpace instance ///\exception H5::DataSetIException -// Programmer Binh-Minh Ribler - 2000 //-------------------------------------------------------------------------- DataSpace DataSet::getSpace() const @@ -160,7 +164,6 @@ DataSet::p_get_type() const ///\brief Gets the dataset creation property list. ///\return DSetCreatPropList instance ///\exception H5::DataSetIException -// Programmer Binh-Minh Ribler - 2000 //-------------------------------------------------------------------------- DSetCreatPropList DataSet::getCreatePlist() const @@ -204,7 +207,6 @@ DataSet::getAccessPlist() const ///\exception H5::DataSetIException // Note: H5Dget_storage_size returns 0 when there is no data. This // function should have no failure. (from SLU) -// Programmer Binh-Minh Ribler - Mar, 2005 //-------------------------------------------------------------------------- hsize_t DataSet::getStorageSize() const @@ -218,7 +220,6 @@ DataSet::getStorageSize() const ///\brief Gets the size in memory of the dataset's data. ///\return Size of data (in memory) ///\exception H5::DataSetIException -// Programmer Binh-Minh Ribler - Apr 2009 //-------------------------------------------------------------------------- size_t DataSet::getInMemDataSize() const @@ -276,7 +277,6 @@ DataSet::getInMemDataSize() const ///\brief Returns the address of this dataset in the file. ///\return Address of dataset ///\exception H5::DataSetIException -// Programmer Binh-Minh Ribler - 2000 //-------------------------------------------------------------------------- haddr_t DataSet::getOffset() const @@ -295,7 +295,6 @@ DataSet::getOffset() const ///\brief Determines whether space has been allocated for a dataset. ///\param status - OUT: Space allocation status ///\exception H5::DataSetIException -// Programmer Binh-Minh Ribler - 2000 //-------------------------------------------------------------------------- void DataSet::getSpaceStatus(H5D_space_status_t &status) const @@ -313,7 +312,6 @@ DataSet::getSpaceStatus(H5D_space_status_t &status) const ///\param space - IN: Selection for the memory buffer ///\return Amount of storage ///\exception H5::DataSetIException -// Programmer Binh-Minh Ribler - 2000 //-------------------------------------------------------------------------- hsize_t DataSet::getVlenBufSize(const DataType &type, const DataSpace &space) const @@ -338,7 +336,6 @@ DataSet::getVlenBufSize(const DataType &type, const DataSpace &space) const // misses const's. This wrapper will be removed in future release. // Return Amount of storage // Exception H5::DataSetIException -// Programmer Binh-Minh Ribler - 2000 // Modification // Modified to call its replacement. -BMR, 2014/04/16 // Removed from documentation. -BMR, 2016/03/07 1.8.17 and 1.10.0 @@ -358,7 +355,6 @@ DataSet::getVlenBufSize(const DataType &type, const DataSpace &space) const ///\param xfer_plist - IN: Property list used to create the buffer ///\param buf - IN: Pointer to the buffer to be reclaimed ///\exception H5::DataSetIException -// Programmer Binh-Minh Ribler - 2000 //-------------------------------------------------------------------------- void DataSet::vlenReclaim(const DataType &type, const DataSpace &space, const DSetMemXferPropList &xfer_plist, @@ -384,7 +380,6 @@ DataSet::vlenReclaim(const DataType &type, const DataSpace &space, const DSetMem ///\param xfer_plist - IN: Property list used to create the buffer ///\param buf - IN: Pointer to the buffer to be reclaimed ///\exception H5::DataSetIException -// Programmer Binh-Minh Ribler - 2000 //\parDescription // This function has better prototype for the users than the // other, which might be removed at some point. BMR - 2006/12/20 @@ -417,7 +412,6 @@ DataSet::vlenReclaim(void *buf, const DataType &type, const DataSpace &space, /// This function reads raw data from this dataset into the /// buffer \a buf, converting from file datatype and dataspace /// to memory datatype \a mem_type and dataspace \a mem_space. -// Programmer Binh-Minh Ribler - 2000 //-------------------------------------------------------------------------- void DataSet::read(void *buf, const DataType &mem_type, const DataSpace &mem_space, const DataSpace &file_space, @@ -445,7 +439,6 @@ DataSet::read(void *buf, const DataType &mem_type, const DataSpace &mem_space, c ///\param file_space - IN: Dataset's dataspace in the file ///\param xfer_plist - IN: Transfer property list for this I/O operation ///\exception H5::DataSetIException -// Programmer Binh-Minh Ribler - 2000 // Modification // Jul 2009 // Follow the change to Attribute::read and use the following @@ -494,7 +487,6 @@ DataSet::read(H5std_string &strg, const DataType &mem_type, const DataSpace &mem /// \a buf to a dataset, converting from memory datatype /// \a mem_type and dataspace \a mem_space to file datatype /// and dataspace. -// Programmer Binh-Minh Ribler - 2000 //-------------------------------------------------------------------------- void DataSet::write(const void *buf, const DataType &mem_type, const DataSpace &mem_space, @@ -516,7 +508,6 @@ DataSet::write(const void *buf, const DataType &mem_type, const DataSpace &mem_s // Function: DataSet::write ///\brief This is an overloaded member function, provided for convenience. /// It takes a reference to a \c H5std_string for the buffer. -// Programmer Binh-Minh Ribler - 2000 // Modification // Jul 2009 // Modified to pass the buffer into H5Dwrite properly depending @@ -572,7 +563,6 @@ DataSet::write(const H5std_string &strg, const DataType &mem_type, const DataSpa ///\exception H5::DataSetIException ///\note This function may not work correctly yet - it's still /// under development. -// Programmer Binh-Minh Ribler - 2000 //-------------------------------------------------------------------------- int DataSet::iterateElems(void *buf, const DataType &type, const DataSpace &space, H5D_operator_t op, @@ -598,7 +588,6 @@ DataSet::iterateElems(void *buf, const DataType &type, const DataSpace &space, H ///\par Description /// For information, please refer to the H5Dset_extent API in /// the HDF5 C Reference Manual. -// Programmer Binh-Minh Ribler - 2000 //-------------------------------------------------------------------------- void DataSet::extend(const hsize_t *size) const @@ -617,7 +606,6 @@ DataSet::extend(const hsize_t *size) const ///\param buf_type - IN: Datatype of the elements in buffer ///\param space - IN: Dataspace describing memory buffer & containing selection to use ///\exception H5::DataSetIException -// Programmer Binh-Minh Ribler - 2014 //-------------------------------------------------------------------------- void DataSet::fillMemBuf(const void *fill, const DataType &fill_type, void *buf, const DataType &buf_type, @@ -643,7 +631,6 @@ DataSet::fillMemBuf(const void *fill, const DataType &fill_type, void *buf, cons // Param buf_type - IN: Datatype of the elements in buffer // Param space - IN: Dataspace describing memory buffer & containing selection to use // Exception H5::DataSetIException -// Programmer Binh-Minh Ribler - 2000 // Modification // Modified to call its replacement. -BMR, 2014/04/16 // Removed from documentation. -BMR, 2016/03/07 1.8.17 and 1.10.0 @@ -662,7 +649,6 @@ DataSet::fillMemBuf(const void *fill, const DataType &fill_type, void *buf, cons ///\param buf_type - IN: Datatype of the elements in buffer ///\param space - IN: Dataspace describing memory buffer & containing selection to use ///\exception H5::DataSetIException -// Programmer Binh-Minh Ribler - 2000 //-------------------------------------------------------------------------- void DataSet::fillMemBuf(void *buf, const DataType &buf_type, const DataSpace &space) const @@ -684,7 +670,6 @@ DataSet::fillMemBuf(void *buf, const DataType &buf_type, const DataSpace &space) // Param buf_type - IN: Datatype of the elements in buffer // Param space - IN: Dataspace describing memory buffer & containing selection to use // Exception H5::DataSetIException -// Programmer Binh-Minh Ribler - 2000 // Modification // Modified to call its replacement. -BMR, 2014/04/16 // Removed from documentation. -BMR, 2016/03/07 1.8.17 and 1.10.0 @@ -704,7 +689,6 @@ DataSet::fillMemBuf(void *buf, const DataType &buf_type, const DataSpace &space) // AbstractDs and Attribute are moved out of H5Object. In // addition, member IdComponent::id is moved into subclasses, and // IdComponent::getId now becomes pure virtual function. -// Programmer Binh-Minh Ribler - May, 2008 //-------------------------------------------------------------------------- hid_t DataSet::getId() const @@ -714,11 +698,10 @@ DataSet::getId() const //-------------------------------------------------------------------------- // Function: DataSet::p_read_fixed_len (private) -// brief Reads a fixed length \a H5std_string from a dataset. -// param mem_type - IN: DataSet datatype (in memory) -// param strg - IN: Buffer for read string -// exception H5::DataSetIException -// Programmer Binh-Minh Ribler - Jul, 2009 +// brief Reads a fixed length \a H5std_string from a dataset. +// param mem_type - IN: DataSet datatype (in memory) +// param strg - IN: Buffer for read string +// exceptio n H5::DataSetIException // Modification // Jul 2009 // Added in follow to the change in Attribute::read @@ -752,11 +735,10 @@ DataSet::p_read_fixed_len(const hid_t mem_type_id, const hid_t mem_space_id, con //-------------------------------------------------------------------------- // Function: DataSet::p_read_variable_len (private) -// brief Reads a variable length \a H5std_string from an dataset. -// param mem_type - IN: DataSet datatype (in memory) -// param strg - IN: Buffer for read string -// exception H5::DataSetIException -// Programmer Binh-Minh Ribler - Jul, 2009 +// brief Reads a variable length \a H5std_string from an dataset. +// param mem_type - IN: DataSet datatype (in memory) +// param strg - IN: Buffer for read string +// exception H5::DataSetIException // Modification // Jul 2009 // Added in follow to the change in Attribute::read @@ -791,7 +773,6 @@ DataSet::p_read_variable_len(const hid_t mem_type_id, const hid_t mem_space_id, // The underlaying reference counting in the C library ensures // that the current valid id of this object is properly closed. // Then the object's id is reset to the new id. -// Programmer Binh-Minh Ribler - 2000 //-------------------------------------------------------------------------- void DataSet::p_setId(const hid_t new_id) @@ -815,7 +796,6 @@ DataSet::p_setId(const hid_t new_id) // Applications shouldn't need to use it. // param dset - IN/OUT: DataSet object to be changed // param new_id - IN: New id to set -// Programmer Binh-Minh Ribler - 2015 //-------------------------------------------------------------------------- void f_PropList_setId(PropList *plist, hid_t new_id) @@ -830,7 +810,6 @@ f_PropList_setId(PropList *plist, hid_t new_id) ///\brief Closes this dataset. /// ///\exception H5::DataSetIException -// Programmer Binh-Minh Ribler - Mar 9, 2005 //-------------------------------------------------------------------------- void DataSet::close() @@ -848,7 +827,6 @@ DataSet::close() //-------------------------------------------------------------------------- // Function: DataSet destructor ///\brief Properly terminates access to this dataset. -// Programmer Binh-Minh Ribler - 2000 // Modification // - Replaced resetIdComponent() with decRefCount() to use C // library ID reference counting mechanism - BMR, Jun 1, 2004 diff --git a/c++/src/H5DataSet.h b/c++/src/H5DataSet.h index 0bf7589..333ed7a 100644 --- a/c++/src/H5DataSet.h +++ b/c++/src/H5DataSet.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5DataSet_H -#define __H5DataSet_H +#ifndef H5DataSet_H +#define H5DataSet_H namespace H5 { @@ -117,6 +117,9 @@ class H5_DLLCPP DataSet : public H5Object, public AbstractDs { // Copy constructor - same as the original DataSet. DataSet(const DataSet &original); + // Assignment operator + DataSet &operator=(const DataSet &original); + // Creates a copy of an existing DataSet using its id. DataSet(const hid_t existing_id); @@ -153,4 +156,4 @@ class H5_DLLCPP DataSet : public H5Object, public AbstractDs { }; // end of DataSet } // namespace H5 -#endif // __H5DataSet_H +#endif // H5DataSet_H diff --git a/c++/src/H5DataSpace.cpp b/c++/src/H5DataSpace.cpp index 47fdbbc..0485530 100644 --- a/c++/src/H5DataSpace.cpp +++ b/c++/src/H5DataSpace.cpp @@ -6,16 +6,12 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif #include <string> #include "H5Include.h" diff --git a/c++/src/H5DataSpace.h b/c++/src/H5DataSpace.h index b5e92bc..470de74 100644 --- a/c++/src/H5DataSpace.h +++ b/c++/src/H5DataSpace.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5DataSpace_H -#define __H5DataSpace_H +#ifndef H5DataSpace_H +#define H5DataSpace_H namespace H5 { @@ -43,7 +43,7 @@ class H5_DLLCPP DataSpace : public IdComponent { DataSpace &operator=(const DataSpace &rhs); // Closes this dataspace. - virtual void close(); + virtual void close() H5_OVERRIDE; // Makes copy of an existing dataspace. void copy(const DataSpace &like_space); @@ -115,13 +115,13 @@ class H5_DLLCPP DataSpace : public IdComponent { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("DataSpace"); } // Gets the dataspace id. - virtual hid_t getId() const; + virtual hid_t getId() const H5_OVERRIDE; // Deletes the global constant static void deleteConstants(); @@ -133,7 +133,7 @@ class H5_DLLCPP DataSpace : public IdComponent { protected: // Sets the dataspace id. - virtual void p_setId(const hid_t new_id); + virtual void p_setId(const hid_t new_id) H5_OVERRIDE; #endif // DOXYGEN_SHOULD_SKIP_THIS @@ -155,4 +155,4 @@ class H5_DLLCPP DataSpace : public IdComponent { }; // end of DataSpace } // namespace H5 -#endif // __H5DataSpace_H +#endif // H5DataSpace_H diff --git a/c++/src/H5DataType.cpp b/c++/src/H5DataType.cpp index eecce00..3228dcb 100644 --- a/c++/src/H5DataType.cpp +++ b/c++/src/H5DataType.cpp @@ -6,16 +6,12 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif #include <string> #include "H5Include.h" diff --git a/c++/src/H5DataType.h b/c++/src/H5DataType.h index 32badfe..49f5348 100644 --- a/c++/src/H5DataType.h +++ b/c++/src/H5DataType.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5DataType_H -#define __H5DataType_H +#ifndef H5DataType_H +#define H5DataType_H namespace H5 { @@ -183,4 +183,4 @@ class H5_DLLCPP DataType : public H5Object { }; // end of DataType } // namespace H5 -#endif // __H5DataType_H +#endif // H5DataType_H diff --git a/c++/src/H5DcreatProp.cpp b/c++/src/H5DcreatProp.cpp index 6cca01a..4c71d5e 100644 --- a/c++/src/H5DcreatProp.cpp +++ b/c++/src/H5DcreatProp.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5DcreatProp.h b/c++/src/H5DcreatProp.h index e73ec32..3c032ee 100644 --- a/c++/src/H5DcreatProp.h +++ b/c++/src/H5DcreatProp.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5DSCreatPropList_H -#define __H5DSCreatPropList_H +#ifndef H5DSCreatPropList_H +#define H5DSCreatPropList_H namespace H5 { @@ -159,4 +159,4 @@ class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { }; // end of DSetCreatPropList } // namespace H5 -#endif // __H5DSCreatPropList_H +#endif // H5DSCreatPropList_H diff --git a/c++/src/H5DxferProp.cpp b/c++/src/H5DxferProp.cpp index ed7df9a..2b50de4 100644 --- a/c++/src/H5DxferProp.cpp +++ b/c++/src/H5DxferProp.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -312,7 +312,7 @@ DSetMemXferPropList::getDataTransform() const { // Initialize string to "", so that if there is no expression, the returned // string will be empty - H5std_string expression(""); + H5std_string expression; // Preliminary call to get the expression's length ssize_t exp_len = H5Pget_data_transform(id, NULL, (size_t)0); diff --git a/c++/src/H5DxferProp.h b/c++/src/H5DxferProp.h index 59ece6f..1e4d668 100644 --- a/c++/src/H5DxferProp.h +++ b/c++/src/H5DxferProp.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5DSetMemXferPropList_H -#define __H5DSetMemXferPropList_H +#ifndef H5DSetMemXferPropList_H +#define H5DSetMemXferPropList_H namespace H5 { @@ -131,4 +131,4 @@ class H5_DLLCPP DSetMemXferPropList : public PropList { }; // end of DSetMemXferPropList } // namespace H5 -#endif // __H5DSetMemXferPropList_H +#endif // H5DSetMemXferPropList_H diff --git a/c++/src/H5EnumType.cpp b/c++/src/H5EnumType.cpp index a034a24..6c7b533 100644 --- a/c++/src/H5EnumType.cpp +++ b/c++/src/H5EnumType.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5EnumType.h b/c++/src/H5EnumType.h index e3d9a50..484405a 100644 --- a/c++/src/H5EnumType.h +++ b/c++/src/H5EnumType.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5EnumType_H -#define __H5EnumType_H +#ifndef H5EnumType_H +#define H5EnumType_H namespace H5 { @@ -87,4 +87,4 @@ class H5_DLLCPP EnumType : public DataType { }; // end of EnumType } // namespace H5 -#endif // __H5EnumType_H +#endif // H5EnumType_H diff --git a/c++/src/H5Exception.cpp b/c++/src/H5Exception.cpp index 934b179..6769439 100644 --- a/c++/src/H5Exception.cpp +++ b/c++/src/H5Exception.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -25,7 +25,7 @@ const char Exception::DEFAULT_MSG[] = "No detailed information provided"; ///\brief Default constructor. // Programmer Binh-Minh Ribler - 2000 //-------------------------------------------------------------------------- -Exception::Exception() : detail_message(""), func_name("") +Exception::Exception() { } diff --git a/c++/src/H5Exception.h b/c++/src/H5Exception.h index 44edac2..9970d22 100644 --- a/c++/src/H5Exception.h +++ b/c++/src/H5Exception.h @@ -7,22 +7,18 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5Exception_H -#define __H5Exception_H +#ifndef H5Exception_H +#define H5Exception_H #include <string> namespace H5 { -#ifdef H5_NO_STD -#define H5std_string ::string -#else #define H5std_string std::string -#endif /*! \class Exception \brief Exception provides wrappers of HDF5 error handling functions. @@ -94,86 +90,86 @@ class H5_DLLCPP FileIException : public Exception { public: FileIException(const H5std_string &func_name, const H5std_string &message = DEFAULT_MSG); FileIException(); - virtual ~FileIException() throw(); + virtual ~FileIException() throw() H5_OVERRIDE; }; class H5_DLLCPP GroupIException : public Exception { public: GroupIException(const H5std_string &func_name, const H5std_string &message = DEFAULT_MSG); GroupIException(); - virtual ~GroupIException() throw(); + virtual ~GroupIException() throw() H5_OVERRIDE; }; class H5_DLLCPP DataSpaceIException : public Exception { public: DataSpaceIException(const H5std_string &func_name, const H5std_string &message = DEFAULT_MSG); DataSpaceIException(); - virtual ~DataSpaceIException() throw(); + virtual ~DataSpaceIException() throw() H5_OVERRIDE; }; class H5_DLLCPP DataTypeIException : public Exception { public: DataTypeIException(const H5std_string &func_name, const H5std_string &message = DEFAULT_MSG); DataTypeIException(); - virtual ~DataTypeIException() throw(); + virtual ~DataTypeIException() throw() H5_OVERRIDE; }; class H5_DLLCPP ObjHeaderIException : public Exception { public: ObjHeaderIException(const H5std_string &func_name, const H5std_string &message = DEFAULT_MSG); ObjHeaderIException(); - virtual ~ObjHeaderIException() throw(); + virtual ~ObjHeaderIException() throw() H5_OVERRIDE; }; class H5_DLLCPP PropListIException : public Exception { public: PropListIException(const H5std_string &func_name, const H5std_string &message = DEFAULT_MSG); PropListIException(); - virtual ~PropListIException() throw(); + virtual ~PropListIException() throw() H5_OVERRIDE; }; class H5_DLLCPP DataSetIException : public Exception { public: DataSetIException(const H5std_string &func_name, const H5std_string &message = DEFAULT_MSG); DataSetIException(); - virtual ~DataSetIException() throw(); + virtual ~DataSetIException() throw() H5_OVERRIDE; }; class H5_DLLCPP AttributeIException : public Exception { public: AttributeIException(const H5std_string &func_name, const H5std_string &message = DEFAULT_MSG); AttributeIException(); - virtual ~AttributeIException() throw(); + virtual ~AttributeIException() throw() H5_OVERRIDE; }; class H5_DLLCPP ReferenceException : public Exception { public: ReferenceException(const H5std_string &func_name, const H5std_string &message = DEFAULT_MSG); ReferenceException(); - virtual ~ReferenceException() throw(); + virtual ~ReferenceException() throw() H5_OVERRIDE; }; class H5_DLLCPP LibraryIException : public Exception { public: LibraryIException(const H5std_string &func_name, const H5std_string &message = DEFAULT_MSG); LibraryIException(); - virtual ~LibraryIException() throw(); + virtual ~LibraryIException() throw() H5_OVERRIDE; }; class H5_DLLCPP LocationException : public Exception { public: LocationException(const H5std_string &func_name, const H5std_string &message = DEFAULT_MSG); LocationException(); - virtual ~LocationException() throw(); + virtual ~LocationException() throw() H5_OVERRIDE; }; class H5_DLLCPP IdComponentException : public Exception { public: IdComponentException(const H5std_string &func_name, const H5std_string &message = DEFAULT_MSG); IdComponentException(); - virtual ~IdComponentException() throw(); + virtual ~IdComponentException() throw() H5_OVERRIDE; }; // end of IdComponentException } // namespace H5 -#endif // __H5Exception_H +#endif // H5Exception_H diff --git a/c++/src/H5FaccProp.cpp b/c++/src/H5FaccProp.cpp index f6f35c5..005e599 100644 --- a/c++/src/H5FaccProp.cpp +++ b/c++/src/H5FaccProp.cpp @@ -6,16 +6,12 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif #include <string> using std::cerr; @@ -697,6 +693,52 @@ FileAccPropList::getGcReferences() const } //-------------------------------------------------------------------------- +// Function: FileAccPropList::setFileLocking +///\brief Sets file locking flags. +///\param use_file_locking - IN: Flag that determines if file locks should +// be used or not. +///\param ignore_when_disabled - IN: Flag that determines if file locks +// should be be used when disabled on the file system or not. +///\exception H5::PropListIException +///\par Description +/// For information, please refer to the H5Pset_file_locking API in +/// the HDF5 C Reference Manual. +// Programmer Dana Robinson - 2020 +//-------------------------------------------------------------------------- +void +FileAccPropList::setFileLocking(hbool_t use_file_locking, hbool_t ignore_when_disabled) const +{ + herr_t ret_value = H5Pset_file_locking(id, use_file_locking, ignore_when_disabled); + + if (ret_value < 0) { + throw PropListIException("FileAccPropList::setFileLocking", "H5Pset_file_locking failed"); + } +} + +//-------------------------------------------------------------------------- +// Function: FileAccPropList::getFileLocking +///\brief Gets file locking flags. +///\param use_file_locking - OUT: Flag that determines if file locks +// should be used or not. +///\param ignore_when_disabled - OUT: Flag that determines if file locks +// should be be used when disabled on the file system or not. +///\exception H5::PropListIException +///\par Description +/// For information, please refer to the H5Pget_file_locking API in +/// the HDF5 C Reference Manual. +// Programmer Dana Robinson - 2020 +//-------------------------------------------------------------------------- +void +FileAccPropList::getFileLocking(hbool_t &use_file_locking, hbool_t &ignore_when_disabled) const +{ + herr_t ret_value = H5Pget_file_locking(id, &use_file_locking, &ignore_when_disabled); + + if (ret_value < 0) { + throw PropListIException("FileAccPropList::getFileLocking", "H5Pget_file_locking failed"); + } +} + +//-------------------------------------------------------------------------- // Function: FileAccPropList::setLibverBounds ///\brief Sets bounds on versions of library format to be used when creating /// or writing objects. diff --git a/c++/src/H5FaccProp.h b/c++/src/H5FaccProp.h index d1a5051..998f870 100644 --- a/c++/src/H5FaccProp.h +++ b/c++/src/H5FaccProp.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5FileAccPropList_H -#define __H5FileAccPropList_H +#ifndef H5FileAccPropList_H +#define H5FileAccPropList_H namespace H5 { @@ -122,6 +122,12 @@ class H5_DLLCPP FileAccPropList : public PropList { // Returns garbage collecting references setting. unsigned getGcReferences() const; + // Sets file locking parameters. + void setFileLocking(hbool_t use_file_locking, hbool_t ignore_when_disabled) const; + + // Gets file locking parameters. + void getFileLocking(hbool_t &use_file_locking, hbool_t &ignore_when_disabled) const; + // Sets bounds on versions of library format to be used when creating // or writing objects. void setLibverBounds(H5F_libver_t libver_low, H5F_libver_t libver_high) const; @@ -162,4 +168,4 @@ class H5_DLLCPP FileAccPropList : public PropList { }; // end of FileAccPropList } // namespace H5 -#endif // __H5FileAccPropList_H +#endif // H5FileAccPropList_H diff --git a/c++/src/H5FcreatProp.cpp b/c++/src/H5FcreatProp.cpp index ccc9251..b9be563 100644 --- a/c++/src/H5FcreatProp.cpp +++ b/c++/src/H5FcreatProp.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5FcreatProp.h b/c++/src/H5FcreatProp.h index d19b60d..00ae0b1 100644 --- a/c++/src/H5FcreatProp.h +++ b/c++/src/H5FcreatProp.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5FileCreatPropList_H -#define __H5FileCreatPropList_H +#ifndef H5FileCreatPropList_H +#define H5FileCreatPropList_H namespace H5 { @@ -109,4 +109,4 @@ class H5_DLLCPP FileCreatPropList : public PropList { }; // end of FileCreatPropList } // namespace H5 -#endif // __H5FileCreatPropList_H +#endif // H5FileCreatPropList_H diff --git a/c++/src/H5File.cpp b/c++/src/H5File.cpp index 677c3e6..9a6f191 100644 --- a/c++/src/H5File.cpp +++ b/c++/src/H5File.cpp @@ -6,16 +6,12 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif #include <string> #include "H5Include.h" @@ -184,7 +180,7 @@ H5File::H5File(hid_t existing_id) : Group() ///\param original - IN: H5File instance to copy // December 2000 //-------------------------------------------------------------------------- -H5File::H5File(const H5File &original) : Group() +H5File::H5File(const H5File &original) : Group(original) { id = original.getId(); incRefCount(); // increment number of references to this id diff --git a/c++/src/H5File.h b/c++/src/H5File.h index 9231d5f..6126eec 100644 --- a/c++/src/H5File.h +++ b/c++/src/H5File.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5File_H -#define __H5File_H +#ifndef H5File_H +#define H5File_H namespace H5 { @@ -39,7 +39,7 @@ class H5_DLLCPP H5File : public Group { const FileAccPropList &access_plist = FileAccPropList::DEFAULT); // Close this file. - virtual void close(); + virtual void close() H5_OVERRIDE; // Gets a copy of the access property list of this file. FileAccPropList getAccessPlist() const; @@ -96,16 +96,16 @@ class H5_DLLCPP H5File : public Group { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("H5File"); } // Throw file exception. - virtual void throwException(const H5std_string &func_name, const H5std_string &msg) const; + virtual void throwException(const H5std_string &func_name, const H5std_string &msg) const H5_OVERRIDE; // For CommonFG to get the file id. - virtual hid_t getLocId() const; + virtual hid_t getLocId() const H5_OVERRIDE; // Default constructor H5File(); @@ -114,7 +114,7 @@ class H5_DLLCPP H5File : public Group { H5File(const H5File &original); // Gets the HDF5 file id. - virtual hid_t getId() const; + virtual hid_t getId() const H5_OVERRIDE; // H5File destructor. virtual ~H5File(); @@ -122,7 +122,7 @@ class H5_DLLCPP H5File : public Group { protected: #ifndef DOXYGEN_SHOULD_SKIP_THIS // Sets the HDF5 file id. - virtual void p_setId(const hid_t new_id); + virtual void p_setId(const hid_t new_id) H5_OVERRIDE; #endif // DOXYGEN_SHOULD_SKIP_THIS private: @@ -136,4 +136,4 @@ class H5_DLLCPP H5File : public Group { }; // end of H5File } // namespace H5 -#endif // __H5File_H +#endif // H5File_H diff --git a/c++/src/H5FloatType.cpp b/c++/src/H5FloatType.cpp index 3941f60..33f8377 100644 --- a/c++/src/H5FloatType.cpp +++ b/c++/src/H5FloatType.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5FloatType.h b/c++/src/H5FloatType.h index 2368113..c76be95 100644 --- a/c++/src/H5FloatType.h +++ b/c++/src/H5FloatType.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5FloatType_H -#define __H5FloatType_H +#ifndef H5FloatType_H +#define H5FloatType_H namespace H5 { @@ -84,4 +84,4 @@ class H5_DLLCPP FloatType : public AtomType { }; // end of FloatType } // namespace H5 -#endif // __H5FloatType_H +#endif // H5FloatType_H diff --git a/c++/src/H5Group.cpp b/c++/src/H5Group.cpp index f30f03b..fe791da 100644 --- a/c++/src/H5Group.cpp +++ b/c++/src/H5Group.cpp @@ -6,16 +6,12 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif #include <string> #include "H5Include.h" diff --git a/c++/src/H5Group.h b/c++/src/H5Group.h index 7b9dc54..b5f7e51 100644 --- a/c++/src/H5Group.h +++ b/c++/src/H5Group.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __Group_H -#define __Group_H +#ifndef H5Group_H +#define H5Group_H namespace H5 { @@ -24,20 +24,20 @@ namespace H5 { class H5_DLLCPP Group : public H5Object, public CommonFG { public: // Close this group. - virtual void close(); + virtual void close() H5_OVERRIDE; ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("Group"); } // Throw group exception. - virtual void throwException(const H5std_string &func_name, const H5std_string &msg) const; + virtual void throwException(const H5std_string &func_name, const H5std_string &msg) const H5_OVERRIDE; // for CommonFG to get the file id. - virtual hid_t getLocId() const; + virtual hid_t getLocId() const H5_OVERRIDE; // Creates a group by way of dereference. Group(const H5Location &loc, const void *ref, H5R_type_t ref_type = H5R_OBJECT, @@ -63,10 +63,10 @@ class H5_DLLCPP Group : public H5Object, public CommonFG { Group(const Group &original); // Gets the group id. - virtual hid_t getId() const; + virtual hid_t getId() const H5_OVERRIDE; // Destructor - virtual ~Group(); + virtual ~Group() H5_OVERRIDE; // Creates a copy of an existing group using its id. Group(const hid_t group_id); @@ -74,7 +74,7 @@ class H5_DLLCPP Group : public H5Object, public CommonFG { protected: #ifndef DOXYGEN_SHOULD_SKIP_THIS // Sets the group id. - virtual void p_setId(const hid_t new_id); + virtual void p_setId(const hid_t new_id) H5_OVERRIDE; #endif // DOXYGEN_SHOULD_SKIP_THIS private: @@ -83,4 +83,4 @@ class H5_DLLCPP Group : public H5Object, public CommonFG { }; // end of Group } // namespace H5 -#endif // __Group_H +#endif // H5Group_H diff --git a/c++/src/H5IdComponent.cpp b/c++/src/H5IdComponent.cpp index 485b860..18bcbd3 100644 --- a/c++/src/H5IdComponent.cpp +++ b/c++/src/H5IdComponent.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5IdComponent.h b/c++/src/H5IdComponent.h index 8db1af2..383d42d 100644 --- a/c++/src/H5IdComponent.h +++ b/c++/src/H5IdComponent.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __IdComponent_H -#define __IdComponent_H +#ifndef H5IdComponent_H +#define H5IdComponent_H namespace H5 { @@ -113,4 +113,4 @@ class H5_DLLCPP IdComponent { }; // end class IdComponent } // namespace H5 -#endif // __IdComponent_H +#endif // H5IdComponent_H diff --git a/c++/src/H5Include.h b/c++/src/H5Include.h index c26ba33..0dc930d 100644 --- a/c++/src/H5Include.h +++ b/c++/src/H5Include.h @@ -7,26 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ #include <hdf5.h> -// Define bool type for platforms that don't support bool yet -#ifdef BOOL_NOTDEFINED -#ifdef false -#undef false -#endif -#ifdef true -#undef true -#endif -typedef int bool; -const bool false = 0; -const bool true = 1; -#endif - // These are defined in H5Opkg.h, which should not be included in the C++ API, // so re-define them here for now. @@ -37,3 +24,10 @@ const bool true = 1; * magic number as prefix and checksum as suffix for all chunks. */ #define H5O_VERSION_2 2 + +// Define H5_OVERRIDE to override for C++11. +#if defined(__cplusplus) && (201103L <= __cplusplus) +#define H5_OVERRIDE override +#else +#define H5_OVERRIDE +#endif diff --git a/c++/src/H5IntType.cpp b/c++/src/H5IntType.cpp index 00eea5e..27c4491 100644 --- a/c++/src/H5IntType.cpp +++ b/c++/src/H5IntType.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5IntType.h b/c++/src/H5IntType.h index e8bccca..185c8f0 100644 --- a/c++/src/H5IntType.h +++ b/c++/src/H5IntType.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5IntType_H -#define __H5IntType_H +#ifndef H5IntType_H +#define H5IntType_H namespace H5 { @@ -66,4 +66,4 @@ class H5_DLLCPP IntType : public AtomType { }; // end of IntType } // namespace H5 -#endif // __H5IntType_H +#endif // H5IntType_H diff --git a/c++/src/H5LaccProp.cpp b/c++/src/H5LaccProp.cpp index bd6c26b..feaa555 100644 --- a/c++/src/H5LaccProp.cpp +++ b/c++/src/H5LaccProp.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5LaccProp.h b/c++/src/H5LaccProp.h index 337f0b7..4fa516c 100644 --- a/c++/src/H5LaccProp.h +++ b/c++/src/H5LaccProp.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5LinkAccPropList_H -#define __H5LinkAccPropList_H +#ifndef H5LinkAccPropList_H +#define H5LinkAccPropList_H namespace H5 { @@ -70,4 +70,4 @@ class H5_DLLCPP LinkAccPropList : public PropList { }; // end of LinkAccPropList } // namespace H5 -#endif // __H5LinkAccPropList_H +#endif // H5LinkAccPropList_H diff --git a/c++/src/H5LcreatProp.cpp b/c++/src/H5LcreatProp.cpp index 7bcdd2b..29721c1 100644 --- a/c++/src/H5LcreatProp.cpp +++ b/c++/src/H5LcreatProp.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5LcreatProp.h b/c++/src/H5LcreatProp.h index 7194bdc..aea38e7 100644 --- a/c++/src/H5LcreatProp.h +++ b/c++/src/H5LcreatProp.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5LinkCreatPropList_H -#define __H5LinkCreatPropList_H +#ifndef H5LinkCreatPropList_H +#define H5LinkCreatPropList_H namespace H5 { @@ -77,4 +77,4 @@ class H5_DLLCPP LinkCreatPropList : public PropList { }; // end of LinkCreatPropList } // namespace H5 -#endif // __H5LinkCreatPropList_H +#endif // H5LinkCreatPropList_H diff --git a/c++/src/H5Library.cpp b/c++/src/H5Library.cpp index f64bce4..37516be 100644 --- a/c++/src/H5Library.cpp +++ b/c++/src/H5Library.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5Library.h b/c++/src/H5Library.h index d3f2831..3df8d56 100644 --- a/c++/src/H5Library.h +++ b/c++/src/H5Library.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5Library_H -#define __H5Library_H +#ifndef H5Library_H +#define H5Library_H namespace H5 { @@ -69,4 +69,4 @@ class H5_DLLCPP H5Library { }; // end of H5Library } // namespace H5 -#endif // __H5Library_H +#endif // H5Library_H diff --git a/c++/src/H5Location.cpp b/c++/src/H5Location.cpp index ba498d9..065de0c 100644 --- a/c++/src/H5Location.cpp +++ b/c++/src/H5Location.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -348,7 +348,7 @@ H5Location::getComment(const char *name, size_t buf_size) const { // Initialize string to "", so that if there is no comment, the returned // string will be empty - H5std_string comment(""); + H5std_string comment; // Preliminary call to get the comment's length ssize_t comment_len = H5Oget_comment_by_name(getId(), name, NULL, (size_t)0, H5P_DEFAULT); @@ -400,6 +400,7 @@ H5Location::getComment(const H5std_string &name, size_t buf_size) const { return (getComment(name.c_str(), buf_size)); } + #ifndef DOXYGEN_SHOULD_SKIP_THIS //-------------------------------------------------------------------------- @@ -648,6 +649,7 @@ H5Location::p_get_obj_type(void *ref, H5R_type_t ref_type) const return (obj_type); } #endif // DOXYGEN_SHOULD_SKIP_THIS + #endif /* H5_NO_DEPRECATED_SYMBOLS */ //-------------------------------------------------------------------------- @@ -706,6 +708,7 @@ H5Location::p_get_ref_obj_type(void *ref, H5R_type_t ref_type) const } return (obj_type); } +#endif // DOXYGEN_SHOULD_SKIP_THIS //-------------------------------------------------------------------------- // Function: H5Location::getRegion @@ -1818,7 +1821,7 @@ H5Location::getLinkval(const char *name, size_t size) const H5L_info2_t linkinfo; char * value_C; // value in C string size_t val_size = size; - H5std_string value = ""; + H5std_string value; herr_t ret_value; // if user doesn't provide buffer size, determine it @@ -2155,6 +2158,7 @@ H5Location::childObjType(const char *objname) const break; case H5O_TYPE_UNKNOWN: case H5O_TYPE_NTYPES: + case H5O_TYPE_MAP: default: throwException("childObjType", "Unknown type of object"); } @@ -2233,6 +2237,7 @@ H5Location::childObjType(hsize_t index, H5_index_t index_type, H5_iter_order_t o break; case H5O_TYPE_UNKNOWN: case H5O_TYPE_NTYPES: + case H5O_TYPE_MAP: default: throwException("childObjType", "Unknown type of object"); } @@ -2294,7 +2299,6 @@ H5Location::childObjVersion(const H5std_string &objname) const } #ifndef H5_NO_DEPRECATED_SYMBOLS -#ifndef DOXYGEN_SHOULD_SKIP_THIS //-------------------------------------------------------------------------- // Function: H5Location::getObjTypeByIdx ///\brief Returns the type of an object in this group, given the @@ -2372,7 +2376,6 @@ H5Location::getObjTypeByIdx(hsize_t idx, H5std_string &type_name) const return (obj_type); } -#endif // DOXYGEN_SHOULD_SKIP_THIS #endif /* H5_NO_DEPRECATED_SYMBOLS */ //-------------------------------------------------------------------------- @@ -2435,6 +2438,4 @@ H5Location::~H5Location() { } -#endif // DOXYGEN_SHOULD_SKIP_THIS - } // namespace H5 diff --git a/c++/src/H5Location.h b/c++/src/H5Location.h index 3ea58cd..740d0ce 100644 --- a/c++/src/H5Location.h +++ b/c++/src/H5Location.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5Location_H -#define __H5Location_H +#ifndef H5Location_H +#define H5Location_H #include "H5Classes.h" // constains forward class declarations @@ -339,4 +339,4 @@ class H5_DLLCPP H5Location : public IdComponent { }; // end of H5Location } // namespace H5 -#endif // __H5Location_H +#endif // H5Location_H diff --git a/c++/src/H5Object.cpp b/c++/src/H5Object.cpp index 9fd750a..71109d3 100644 --- a/c++/src/H5Object.cpp +++ b/c++/src/H5Object.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -42,8 +42,11 @@ namespace H5 { #ifndef DOXYGEN_SHOULD_SKIP_THIS // userAttrOpWrpr interfaces between the user's function and the // C library function H5Aiterate2 -extern "C" herr_t -userAttrOpWrpr(hid_t loc_id, const char *attr_name, const H5A_info_t *ainfo, void *op_data) +extern "C" { + +static herr_t +userAttrOpWrpr(H5_ATTR_UNUSED hid_t loc_id, const char *attr_name, H5_ATTR_UNUSED const H5A_info_t *ainfo, + void *op_data) { H5std_string s_attr_name = H5std_string(attr_name); UserData4Aiterate *myData = reinterpret_cast<UserData4Aiterate *>(op_data); @@ -53,8 +56,9 @@ userAttrOpWrpr(hid_t loc_id, const char *attr_name, const H5A_info_t *ainfo, voi // userVisitOpWrpr interfaces between the user's function and the // C library function H5Ovisit3 -extern "C" herr_t -userVisitOpWrpr(hid_t obj_id, const char *attr_name, const H5O_info2_t *obj_info, void *op_data) +static herr_t +userVisitOpWrpr(H5_ATTR_UNUSED hid_t obj_id, const char *attr_name, const H5O_info2_t *obj_info, + void *op_data) { H5std_string s_attr_name = H5std_string(attr_name); UserData4Visit *myData = reinterpret_cast<UserData4Visit *>(op_data); @@ -62,6 +66,8 @@ userVisitOpWrpr(hid_t obj_id, const char *attr_name, const H5O_info2_t *obj_info return status; } +} // extern "C" + //-------------------------------------------------------------------------- // Function: H5Object default constructor (protected) // Programmer Binh-Minh Ribler - 2000 @@ -473,7 +479,7 @@ H5Object::getObjName(char *obj_name, size_t buf_size) const H5std_string H5Object::getObjName() const { - H5std_string obj_name(""); // object name to return + H5std_string obj_name; // object name to return // Preliminary call to get the size of the object name ssize_t name_size = H5Iget_name(getId(), NULL, static_cast<size_t>(0)); diff --git a/c++/src/H5Object.h b/c++/src/H5Object.h index 104e2a5..bc2f14a 100644 --- a/c++/src/H5Object.h +++ b/c++/src/H5Object.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5Object_H -#define __H5Object_H +#ifndef H5Object_H +#define H5Object_H namespace H5 { @@ -106,7 +106,7 @@ class H5_DLLCPP H5Object : public H5Location { void removeAttr(const H5std_string &name) const; // Returns an identifier. - virtual hid_t getId() const = 0; + virtual hid_t getId() const H5_OVERRIDE = 0; // Gets the name of this HDF5 object, i.e., Group, DataSet, or // DataType. @@ -122,14 +122,14 @@ class H5_DLLCPP H5Object : public H5Location { // Sets the identifier of this object to a new value. - this one // doesn't increment reference count - virtual void p_setId(const hid_t new_id) = 0; + virtual void p_setId(const hid_t new_id) H5_OVERRIDE = 0; // Noop destructor. - virtual ~H5Object(); + virtual ~H5Object() H5_OVERRIDE; #endif // DOXYGEN_SHOULD_SKIP_THIS }; // end of H5Object } // namespace H5 -#endif // __H5Object_H +#endif // H5Object_H diff --git a/c++/src/H5OcreatProp.cpp b/c++/src/H5OcreatProp.cpp index 20e781a..81dae31 100644 --- a/c++/src/H5OcreatProp.cpp +++ b/c++/src/H5OcreatProp.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5OcreatProp.h b/c++/src/H5OcreatProp.h index ffafd44..7f6d411 100644 --- a/c++/src/H5OcreatProp.h +++ b/c++/src/H5OcreatProp.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5ObjCreatPropList_H -#define __H5ObjCreatPropList_H +#ifndef H5ObjCreatPropList_H +#define H5ObjCreatPropList_H namespace H5 { @@ -75,4 +75,4 @@ class H5_DLLCPP ObjCreatPropList : public PropList { }; // end of ObjCreatPropList } // namespace H5 -#endif // __H5ObjCreatPropList_H +#endif // H5ObjCreatPropList_H diff --git a/c++/src/H5PredType.cpp b/c++/src/H5PredType.cpp index 5943a1b..9e67968 100644 --- a/c++/src/H5PredType.cpp +++ b/c++/src/H5PredType.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -27,6 +27,7 @@ #include "H5DataType.h" #include "H5AtomType.h" #include "H5PredType.h" +#include "H5private.h" namespace H5 { @@ -89,7 +90,7 @@ PredType::operator=(const PredType &rhs) // These dummy functions do not inherit from DataType - they'll // throw an DataTypeIException if invoked. void -PredType::commit(H5Location &loc, const char *name) +PredType::commit(H5_ATTR_UNUSED H5Location &loc, H5_ATTR_UNUSED const char *name) { throw DataTypeIException("PredType::commit", "Error: Attempted to commit a predefined datatype. Invalid operation!"); diff --git a/c++/src/H5PredType.h b/c++/src/H5PredType.h index 2d1185b..b40d2b3 100644 --- a/c++/src/H5PredType.h +++ b/c++/src/H5PredType.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5PredType_H -#define __H5PredType_H +#ifndef H5PredType_H +#define H5PredType_H namespace H5 { @@ -435,11 +435,11 @@ class H5_DLLCPP PredType : public AtomType { #if H5_SIZEOF_UINT_FAST64_T != 0 static PredType *NATIVE_UINT_FAST64_; #endif /* H5_SIZEOF_UINT_FAST64_T */ - // End of Declaration of pointers + // End of Declaration of pointers #endif // DOXYGEN_SHOULD_SKIP_THIS }; // end of PredType } // namespace H5 -#endif // __H5PredType_H +#endif // H5PredType_H diff --git a/c++/src/H5PropList.cpp b/c++/src/H5PropList.cpp index 7d6447b..fda4114 100644 --- a/c++/src/H5PropList.cpp +++ b/c++/src/H5PropList.cpp @@ -6,16 +6,12 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif #include <string> @@ -157,6 +153,8 @@ PropList::PropList(const hid_t plist_id) : IdComponent() case H5I_ERROR_STACK: case H5I_NTYPES: case H5I_UNINIT: + case H5I_MAP: + case H5I_SPACE_SEL_ITER: default: id = H5P_DEFAULT; break; diff --git a/c++/src/H5PropList.h b/c++/src/H5PropList.h index 805f6da..12c8b4b 100644 --- a/c++/src/H5PropList.h +++ b/c++/src/H5PropList.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5PropList_H -#define __H5PropList_H +#ifndef H5PropList_H +#define H5PropList_H namespace H5 { @@ -144,4 +144,4 @@ class H5_DLLCPP PropList : public IdComponent { }; // end of PropList } // namespace H5 -#endif // __H5PropList_H +#endif // H5PropList_H diff --git a/c++/src/H5StrType.cpp b/c++/src/H5StrType.cpp index 5dcf4a6..5df48f3 100644 --- a/c++/src/H5StrType.cpp +++ b/c++/src/H5StrType.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -32,6 +32,7 @@ #include "H5StrType.h" #include "H5DataSet.h" #include "H5PredType.h" +#include "H5private.h" namespace H5 { @@ -104,7 +105,7 @@ StrType::StrType(const PredType &pred_type, const size_t &size) : AtomType() // This constructor replaced the previous one. // Programmer Binh-Minh Ribler - Nov 28, 2005 //-------------------------------------------------------------------------- -StrType::StrType(const int dummy, const size_t &size) : AtomType() +StrType::StrType(H5_ATTR_UNUSED const int dummy, const size_t &size) : AtomType() { // use DataType::copy to make a copy of the string predefined type // then set its length diff --git a/c++/src/H5StrType.h b/c++/src/H5StrType.h index d442bc4..d272c53 100644 --- a/c++/src/H5StrType.h +++ b/c++/src/H5StrType.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5StrType_H -#define __H5StrType_H +#ifndef H5StrType_H +#define H5StrType_H namespace H5 { @@ -78,4 +78,4 @@ class H5_DLLCPP StrType : public AtomType { }; // end of StrType } // namespace H5 -#endif // __H5StrType_H +#endif // H5StrType_H diff --git a/c++/src/H5VarLenType.cpp b/c++/src/H5VarLenType.cpp index 13d1a5f..0270feb 100644 --- a/c++/src/H5VarLenType.cpp +++ b/c++/src/H5VarLenType.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/src/H5VarLenType.h b/c++/src/H5VarLenType.h index 56c699b..f767e0e 100644 --- a/c++/src/H5VarLenType.h +++ b/c++/src/H5VarLenType.h @@ -7,13 +7,13 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5VarLenType_H -#define __H5VarLenType_H +#ifndef H5VarLenType_H +#define H5VarLenType_H namespace H5 { @@ -61,4 +61,4 @@ class H5_DLLCPP VarLenType : public DataType { }; // end of VarLenType } // namespace H5 -#endif // __H5VarLenType_H +#endif // H5VarLenType_H diff --git a/c++/src/Makefile.am b/c++/src/Makefile.am index eb50209..74ef367 100644 --- a/c++/src/Makefile.am +++ b/c++/src/Makefile.am @@ -6,7 +6,7 @@ # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code -# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# distribution tree, or in https://www.hdfgroup.org/licenses. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. ## diff --git a/c++/src/Makefile.in b/c++/src/Makefile.in index f59bb02..4e42c0f 100644 --- a/c++/src/Makefile.in +++ b/c++/src/Makefile.in @@ -22,7 +22,7 @@ # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code -# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# distribution tree, or in https://www.hdfgroup.org/licenses. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. # @@ -116,6 +116,7 @@ am__aclocal_m4_deps = $(top_srcdir)/m4/aclocal_cxx.m4 \ $(top_srcdir)/m4/ax_check_junit.m4 \ $(top_srcdir)/m4/ax_java_options.m4 \ $(top_srcdir)/m4/ax_jni_include_dir.m4 \ + $(top_srcdir)/m4/ax_prog_doxygen.m4 \ $(top_srcdir)/m4/ax_prog_jar.m4 \ $(top_srcdir)/m4/ax_prog_java.m4 \ $(top_srcdir)/m4/ax_prog_java_works.m4 \ @@ -430,7 +431,7 @@ AMTAR = @AMTAR@ # H5_CFLAGS holds flags that should be used when building hdf5, # but which should not be exported to h5cc for building other programs. -# AM_CFLAGS is an automake construct which should be used by Makefiles +# AM_CFLAGS is an automake construct which should be used by Makefiles # instead of CFLAGS, as CFLAGS is reserved solely for the user to define. # This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well. AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@ @@ -457,6 +458,7 @@ CC = @CC@ CCDEPMODE = @CCDEPMODE@ CC_VERSION = @CC_VERSION@ CFLAGS = @CFLAGS@ +CLANG_SANITIZE_CHECKS = @CLANG_SANITIZE_CHECKS@ CODESTACK = @CODESTACK@ CONFIG_DATE = @CONFIG_DATE@ CONFIG_MODE = @CONFIG_MODE@ @@ -473,11 +475,54 @@ DEFAULT_API_VERSION = @DEFAULT_API_VERSION@ DEFS = @DEFS@ DEPDIR = @DEPDIR@ DEPRECATED_SYMBOLS = @DEPRECATED_SYMBOLS@ -DEV_WARNINGS = @DEV_WARNINGS@ +DESIRED_FILE_LOCKING = @DESIRED_FILE_LOCKING@ +DIAGS = @DIAGS@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ +DOXYGEN_EXAMPLES_DIRECTORY = @DOXYGEN_EXAMPLES_DIRECTORY@ +DOXYGEN_EXTERNAL_SEARCH = @DOXYGEN_EXTERNAL_SEARCH@ +DOXYGEN_HTML_EXTRA_FILES = @DOXYGEN_HTML_EXTRA_FILES@ +DOXYGEN_HTML_EXTRA_STYLESHEET = @DOXYGEN_HTML_EXTRA_STYLESHEET@ +DOXYGEN_HTML_FOOTER = @DOXYGEN_HTML_FOOTER@ +DOXYGEN_HTML_HEADER = @DOXYGEN_HTML_HEADER@ +DOXYGEN_INCLUDE_ALIASES = @DOXYGEN_INCLUDE_ALIASES@ +DOXYGEN_INPUT_DIRECTORY = @DOXYGEN_INPUT_DIRECTORY@ +DOXYGEN_LAYOUT_FILE = @DOXYGEN_LAYOUT_FILE@ +DOXYGEN_MACRO_EXPANSION = @DOXYGEN_MACRO_EXPANSION@ +DOXYGEN_OPTIMIZE_OUTPUT_FOR_C = @DOXYGEN_OPTIMIZE_OUTPUT_FOR_C@ +DOXYGEN_OUTPUT_DIRECTORY = @DOXYGEN_OUTPUT_DIRECTORY@ +DOXYGEN_PACKAGE = @DOXYGEN_PACKAGE@ +DOXYGEN_PAPER_SIZE = @DOXYGEN_PAPER_SIZE@ +DOXYGEN_PROJECT_BRIEF = @DOXYGEN_PROJECT_BRIEF@ +DOXYGEN_PROJECT_LOGO = @DOXYGEN_PROJECT_LOGO@ +DOXYGEN_SEARCHENGINE_URL = @DOXYGEN_SEARCHENGINE_URL@ +DOXYGEN_SERVER_BASED_SEARCH = @DOXYGEN_SERVER_BASED_SEARCH@ +DOXYGEN_VERSION_STRING = @DOXYGEN_VERSION_STRING@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ +DX_CONFIG = @DX_CONFIG@ +DX_DOCDIR = @DX_DOCDIR@ +DX_DOT = @DX_DOT@ +DX_DOXYGEN = @DX_DOXYGEN@ +DX_DVIPS = @DX_DVIPS@ +DX_EGREP = @DX_EGREP@ +DX_ENV = @DX_ENV@ +DX_FLAG_chi = @DX_FLAG_chi@ +DX_FLAG_chm = @DX_FLAG_chm@ +DX_FLAG_doc = @DX_FLAG_doc@ +DX_FLAG_dot = @DX_FLAG_dot@ +DX_FLAG_html = @DX_FLAG_html@ +DX_FLAG_man = @DX_FLAG_man@ +DX_FLAG_pdf = @DX_FLAG_pdf@ +DX_FLAG_ps = @DX_FLAG_ps@ +DX_FLAG_rtf = @DX_FLAG_rtf@ +DX_FLAG_xml = @DX_FLAG_xml@ +DX_HHC = @DX_HHC@ +DX_LATEX = @DX_LATEX@ +DX_MAKEINDEX = @DX_MAKEINDEX@ +DX_PDFLATEX = @DX_PDFLATEX@ +DX_PERL = @DX_PERL@ +DX_PROJECT = @DX_PROJECT@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -511,6 +556,7 @@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ +H5_IS_DARWIN = @H5_IS_DARWIN@ H5_JAVACFLAGS = @H5_JAVACFLAGS@ H5_JAVAFLAGS = @H5_JAVAFLAGS@ H5_JNIFLAGS = @H5_JNIFLAGS@ @@ -521,6 +567,7 @@ HAVE_DMALLOC = @HAVE_DMALLOC@ HAVE_Fortran_INTEGER_SIZEOF_16 = @HAVE_Fortran_INTEGER_SIZEOF_16@ HAVE_LIBHDFS = @HAVE_LIBHDFS@ HAVE_PTHREAD = @HAVE_PTHREAD@ +HDF5_DOXYGEN = @HDF5_DOXYGEN@ HDF5_HL = @HDF5_HL@ HDF5_INTERFACES = @HDF5_INTERFACES@ HDF5_TESTS = @HDF5_TESTS@ @@ -533,6 +580,7 @@ HL = @HL@ HL_FOR = @HL_FOR@ HSIZE_T = @HSIZE_T@ HSSIZE_T = @HSSIZE_T@ +IGNORE_DISABLED_FILE_LOCKS = @IGNORE_DISABLED_FILE_LOCKS@ INSTALL = @INSTALL@ INSTALL_DATA = @INSTALL_DATA@ INSTALL_PROGRAM = @INSTALL_PROGRAM@ @@ -570,6 +618,7 @@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MAP_API = @MAP_API@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ +MIRROR_VFD = @MIRROR_VFD@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -606,6 +655,7 @@ PATH_SEPARATOR = @PATH_SEPARATOR@ PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ +RECURSIVE_RW_LOCKS = @RECURSIVE_RW_LOCKS@ ROOT = @ROOT@ ROS3_VFD = @ROS3_VFD@ RUNPARALLEL = @RUNPARALLEL@ @@ -629,6 +679,7 @@ TIME = @TIME@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ +USE_FILE_LOCKING = @USE_FILE_LOCKING@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ @@ -721,15 +772,15 @@ LIBH5_HL = $(top_builddir)/hl/src/libhdf5_hl.la LIBH5F_HL = $(top_builddir)/hl/fortran/src/libhdf5hl_fortran.la LIBH5CPP_HL = $(top_builddir)/hl/c++/src/libhdf5_hl_cpp.la -# Note that in svn revision 19400 the '/' after DESTDIR in H5* variables below -# has been removed. According to the official description of DESTDIR by Gnu at -# http://www.gnu.org/prep/standards/html_node/DESTDIR.html, DESTDIR is -# prepended to the normal and complete install path that it precedes for the -# purpose of installing in a temporary directory which is useful for building -# rpms and other packages. The '/' after ${DESTDIR} will be followed by another -# '/' at the beginning of the normal install path. When DESTDIR is empty the -# path then begins with '//', which is incorrect and causes problems at least for -# Cygwin. +# Note that in svn revision 19400 the '/' after DESTDIR in H5* variables below +# has been removed. According to the official description of DESTDIR by Gnu at +# http://www.gnu.org/prep/standards/html_node/DESTDIR.html, DESTDIR is +# prepended to the normal and complete install path that it precedes for the +# purpose of installing in a temporary directory which is useful for building +# rpms and other packages. The '/' after ${DESTDIR} will be followed by another +# '/' at the beginning of the normal install path. When DESTDIR is empty the +# path then begins with '//', which is incorrect and causes problems at least for +# Cygwin. # Scripts used to build examples # If only shared libraries have been installed, have h5cc build examples with @@ -754,30 +805,30 @@ CHECK_CLEANFILES = *.chkexe *.chklog *.clog *.clog2 # See libtool versioning documentation online. # After making changes, run bin/reconfigure to update other configure related # files like Makefile.in. -LT_VERS_INTERFACE = 200 -LT_VERS_AGE = 0 +LT_VERS_INTERFACE = 201 +LT_VERS_AGE = 1 LT_VERS_REVISION = 0 -LT_CXX_VERS_INTERFACE = 200 +LT_CXX_VERS_INTERFACE = 201 LT_CXX_VERS_REVISION = 0 -LT_CXX_VERS_AGE = 0 -LT_F_VERS_INTERFACE = 200 +LT_CXX_VERS_AGE = 1 +LT_F_VERS_INTERFACE = 201 LT_F_VERS_REVISION = 0 -LT_F_VERS_AGE = 0 +LT_F_VERS_AGE = 1 LT_HL_VERS_INTERFACE = 200 -LT_HL_VERS_REVISION = 0 +LT_HL_VERS_REVISION = 1 LT_HL_VERS_AGE = 0 LT_HL_CXX_VERS_INTERFACE = 200 -LT_HL_CXX_VERS_REVISION = 0 +LT_HL_CXX_VERS_REVISION = 1 LT_HL_CXX_VERS_AGE = 0 LT_HL_F_VERS_INTERFACE = 200 -LT_HL_F_VERS_REVISION = 0 +LT_HL_F_VERS_REVISION = 1 LT_HL_F_VERS_AGE = 0 -LT_JAVA_VERS_INTERFACE = 200 +LT_JAVA_VERS_INTERFACE = 201 LT_JAVA_VERS_REVISION = 0 -LT_JAVA_VERS_AGE = 0 -LT_TOOLS_VERS_INTERFACE = 200 +LT_JAVA_VERS_AGE = 1 +LT_TOOLS_VERS_INTERFACE = 201 LT_TOOLS_VERS_REVISION = 0 -LT_TOOLS_VERS_AGE = 0 +LT_TOOLS_VERS_AGE = 1 # This is our main target lib_LTLIBRARIES = libhdf5_cpp.la @@ -834,7 +885,7 @@ LIB = $(lib_LIBRARIES) $(lib_LTLIBRARIES) $(noinst_LIBRARIES) \ PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS) \ $(EXTRA_PROG) -chk_TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) +chk_TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) TEST_EXTENSIONS = .sh SH_LOG_COMPILER = $(SHELL) AM_SH_LOG_FLAGS = @@ -1411,9 +1462,9 @@ uninstall-am: uninstall-binSCRIPTS uninstall-includeHEADERS \ # commands that should be executed even if a file with the same name already # exists. .PHONY: build-check-clean build-check-p build-check-s build-lib build-progs \ - build-tests check-clean check-install check-p check-s check-vfd \ - check-passthrough-vol install-doc lib progs tests uninstall-doc \ - _exec_check-s _test help + build-tests check-clean check-install check-p check-s check-vfd \ + check-passthrough-vol install-doc lib progs tests uninstall-doc \ + _exec_check-s _test help trace doxygen help: @$(top_srcdir)/bin/makehelp diff --git a/c++/src/cpp_doc_config b/c++/src/cpp_doc_config index 1c30292..f17652e 100644 --- a/c++/src/cpp_doc_config +++ b/c++/src/cpp_doc_config @@ -38,7 +38,7 @@ PROJECT_NAME = # could be handy for archiving the generated documentation or if some version # control system is used. -PROJECT_NUMBER = "1.12.0" +PROJECT_NUMBER = "1.12.1" # Using the PROJECT_BRIEF tag one can provide an optional one line description # for a project that appears at the top of each page and should give viewer a diff --git a/c++/src/h5c++.in b/c++/src/h5c++.in index f068f51..cf993b9 100644 --- a/c++/src/h5c++.in +++ b/c++/src/h5c++.in @@ -7,7 +7,7 @@ # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code -# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# distribution tree, or in https://www.hdfgroup.org/licenses. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. # @@ -311,7 +311,7 @@ fi if test "x$do_link" = "xyes"; then shared_link="" - # conditionally link with the hl library + # conditionally link with the hl library if test "X$HL" = "Xhl"; then libraries=" $libraries -lhdf5_hl_cpp -lhdf5_cpp -lhdf5_hl -lhdf5 " else diff --git a/c++/src/header.html b/c++/src/header.html index cb42565..5b92416 100644 --- a/c++/src/header.html +++ b/c++/src/header.html @@ -13,7 +13,7 @@ xmlns="http://www.w3.org/TR/REC-html40"> * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * diff --git a/c++/test/CMakeLists.txt b/c++/test/CMakeLists.txt index 29534a7..1255e39 100644 --- a/c++/test/CMakeLists.txt +++ b/c++/test/CMakeLists.txt @@ -37,8 +37,9 @@ set (CPP_TEST_SOURCES set (srcdir ${CMAKE_CURRENT_SOURCE_DIR}) configure_file (${HDF5_CPP_TEST_SOURCE_DIR}/H5srcdir_str.h.in H5srcdir_str.h @ONLY) -add_executable (cpp_testhdf5 ${CPP_TEST_SOURCES} ) -target_include_directories (cpp_testhdf5 PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") +add_executable (cpp_testhdf5 ${CPP_TEST_SOURCES} ${HDF5_CPP_TEST_SOURCE_DIR}/h5cpputil.h) +target_include_directories (cpp_testhdf5 PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_TEST_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") +target_compile_options(cpp_testhdf5 PRIVATE "${HDF5_CMAKE_CXX_FLAGS}") target_compile_definitions(cpp_testhdf5 PRIVATE $<$<BOOL:${HDF5_ENABLE_PARALLEL}>:MPICH_SKIP_MPICXX;MPICH_IGNORE_CXX_SEEK># Parallel/MPI, prevent spurious cpp/cxx warnings ) @@ -48,7 +49,7 @@ if (NOT BUILD_SHARED_LIBS) else () TARGET_C_PROPERTIES (cpp_testhdf5 SHARED) target_link_libraries (cpp_testhdf5 PRIVATE ${HDF5_CPP_LIBSH_TARGET} ${HDF5_LIBSH_TARGET} ${HDF5_TEST_LIBSH_TARGET}) - if (MINGW) + if (MINGW AND HDF5_MINGW_STATIC_GCC_LIBS) target_link_options (${HDF5_CPP_LIBSH_TARGET} PRIVATE -static-libgcc -static-libstdc++ ) @@ -56,6 +57,13 @@ else () endif () set_target_properties (cpp_testhdf5 PROPERTIES FOLDER test/cpp) +#----------------------------------------------------------------------------- +# Add Target to clang-format +#----------------------------------------------------------------------------- +if (HDF5_ENABLE_FORMATTERS) + clang_format (HDF5_CPP_TEST_cpp_testhdf5_FORMAT cpp_testhdf5) +endif () + if (HDF5_TEST_CPP AND HDF5_TEST_SERIAL) include (CMakeTests.cmake) endif () diff --git a/c++/test/CMakeTests.cmake b/c++/test/CMakeTests.cmake index a25dc6b..2a0a6be 100644 --- a/c++/test/CMakeTests.cmake +++ b/c++/test/CMakeTests.cmake @@ -5,7 +5,7 @@ # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code -# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# distribution tree, or in https://www.hdfgroup.org/licenses. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. # diff --git a/c++/test/CMakeVFDTests.cmake b/c++/test/CMakeVFDTests.cmake index fcae446..360d14e 100644 --- a/c++/test/CMakeVFDTests.cmake +++ b/c++/test/CMakeVFDTests.cmake @@ -5,7 +5,7 @@ # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code -# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# distribution tree, or in https://www.hdfgroup.org/licenses. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. # @@ -26,7 +26,7 @@ set (VFD_LIST family ) -if (DIRECT_VFD) +if (H5_HAVE_DIRECT) set (VFD_LIST ${VFD_LIST} direct) endif () diff --git a/c++/test/H5srcdir_str.h.in b/c++/test/H5srcdir_str.h.in index bab1df3..988c065 100644 --- a/c++/test/H5srcdir_str.h.in +++ b/c++/test/H5srcdir_str.h.in @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ diff --git a/c++/test/Makefile.am b/c++/test/Makefile.am index 0fc17fc..0194b0e 100644 --- a/c++/test/Makefile.am +++ b/c++/test/Makefile.am @@ -6,7 +6,7 @@ # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code -# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# distribution tree, or in https://www.hdfgroup.org/licenses. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. ## diff --git a/c++/test/Makefile.in b/c++/test/Makefile.in index 0f79807..7d0e712 100644 --- a/c++/test/Makefile.in +++ b/c++/test/Makefile.in @@ -22,7 +22,7 @@ # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code -# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# distribution tree, or in https://www.hdfgroup.org/licenses. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. # @@ -114,6 +114,7 @@ am__aclocal_m4_deps = $(top_srcdir)/m4/aclocal_cxx.m4 \ $(top_srcdir)/m4/ax_check_junit.m4 \ $(top_srcdir)/m4/ax_java_options.m4 \ $(top_srcdir)/m4/ax_jni_include_dir.m4 \ + $(top_srcdir)/m4/ax_prog_doxygen.m4 \ $(top_srcdir)/m4/ax_prog_jar.m4 \ $(top_srcdir)/m4/ax_prog_java.m4 \ $(top_srcdir)/m4/ax_prog_java_works.m4 \ @@ -419,7 +420,7 @@ AMTAR = @AMTAR@ # H5_CFLAGS holds flags that should be used when building hdf5, # but which should not be exported to h5cc for building other programs. -# AM_CFLAGS is an automake construct which should be used by Makefiles +# AM_CFLAGS is an automake construct which should be used by Makefiles # instead of CFLAGS, as CFLAGS is reserved solely for the user to define. # This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well. AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@ @@ -447,6 +448,7 @@ CC = @CC@ CCDEPMODE = @CCDEPMODE@ CC_VERSION = @CC_VERSION@ CFLAGS = @CFLAGS@ +CLANG_SANITIZE_CHECKS = @CLANG_SANITIZE_CHECKS@ CODESTACK = @CODESTACK@ CONFIG_DATE = @CONFIG_DATE@ CONFIG_MODE = @CONFIG_MODE@ @@ -463,11 +465,54 @@ DEFAULT_API_VERSION = @DEFAULT_API_VERSION@ DEFS = @DEFS@ DEPDIR = @DEPDIR@ DEPRECATED_SYMBOLS = @DEPRECATED_SYMBOLS@ -DEV_WARNINGS = @DEV_WARNINGS@ +DESIRED_FILE_LOCKING = @DESIRED_FILE_LOCKING@ +DIAGS = @DIAGS@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ +DOXYGEN_EXAMPLES_DIRECTORY = @DOXYGEN_EXAMPLES_DIRECTORY@ +DOXYGEN_EXTERNAL_SEARCH = @DOXYGEN_EXTERNAL_SEARCH@ +DOXYGEN_HTML_EXTRA_FILES = @DOXYGEN_HTML_EXTRA_FILES@ +DOXYGEN_HTML_EXTRA_STYLESHEET = @DOXYGEN_HTML_EXTRA_STYLESHEET@ +DOXYGEN_HTML_FOOTER = @DOXYGEN_HTML_FOOTER@ +DOXYGEN_HTML_HEADER = @DOXYGEN_HTML_HEADER@ +DOXYGEN_INCLUDE_ALIASES = @DOXYGEN_INCLUDE_ALIASES@ +DOXYGEN_INPUT_DIRECTORY = @DOXYGEN_INPUT_DIRECTORY@ +DOXYGEN_LAYOUT_FILE = @DOXYGEN_LAYOUT_FILE@ +DOXYGEN_MACRO_EXPANSION = @DOXYGEN_MACRO_EXPANSION@ +DOXYGEN_OPTIMIZE_OUTPUT_FOR_C = @DOXYGEN_OPTIMIZE_OUTPUT_FOR_C@ +DOXYGEN_OUTPUT_DIRECTORY = @DOXYGEN_OUTPUT_DIRECTORY@ +DOXYGEN_PACKAGE = @DOXYGEN_PACKAGE@ +DOXYGEN_PAPER_SIZE = @DOXYGEN_PAPER_SIZE@ +DOXYGEN_PROJECT_BRIEF = @DOXYGEN_PROJECT_BRIEF@ +DOXYGEN_PROJECT_LOGO = @DOXYGEN_PROJECT_LOGO@ +DOXYGEN_SEARCHENGINE_URL = @DOXYGEN_SEARCHENGINE_URL@ +DOXYGEN_SERVER_BASED_SEARCH = @DOXYGEN_SERVER_BASED_SEARCH@ +DOXYGEN_VERSION_STRING = @DOXYGEN_VERSION_STRING@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ +DX_CONFIG = @DX_CONFIG@ +DX_DOCDIR = @DX_DOCDIR@ +DX_DOT = @DX_DOT@ +DX_DOXYGEN = @DX_DOXYGEN@ +DX_DVIPS = @DX_DVIPS@ +DX_EGREP = @DX_EGREP@ +DX_ENV = @DX_ENV@ +DX_FLAG_chi = @DX_FLAG_chi@ +DX_FLAG_chm = @DX_FLAG_chm@ +DX_FLAG_doc = @DX_FLAG_doc@ +DX_FLAG_dot = @DX_FLAG_dot@ +DX_FLAG_html = @DX_FLAG_html@ +DX_FLAG_man = @DX_FLAG_man@ +DX_FLAG_pdf = @DX_FLAG_pdf@ +DX_FLAG_ps = @DX_FLAG_ps@ +DX_FLAG_rtf = @DX_FLAG_rtf@ +DX_FLAG_xml = @DX_FLAG_xml@ +DX_HHC = @DX_HHC@ +DX_LATEX = @DX_LATEX@ +DX_MAKEINDEX = @DX_MAKEINDEX@ +DX_PDFLATEX = @DX_PDFLATEX@ +DX_PERL = @DX_PERL@ +DX_PROJECT = @DX_PROJECT@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -501,6 +546,7 @@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ +H5_IS_DARWIN = @H5_IS_DARWIN@ H5_JAVACFLAGS = @H5_JAVACFLAGS@ H5_JAVAFLAGS = @H5_JAVAFLAGS@ H5_JNIFLAGS = @H5_JNIFLAGS@ @@ -511,6 +557,7 @@ HAVE_DMALLOC = @HAVE_DMALLOC@ HAVE_Fortran_INTEGER_SIZEOF_16 = @HAVE_Fortran_INTEGER_SIZEOF_16@ HAVE_LIBHDFS = @HAVE_LIBHDFS@ HAVE_PTHREAD = @HAVE_PTHREAD@ +HDF5_DOXYGEN = @HDF5_DOXYGEN@ HDF5_HL = @HDF5_HL@ HDF5_INTERFACES = @HDF5_INTERFACES@ HDF5_TESTS = @HDF5_TESTS@ @@ -523,6 +570,7 @@ HL = @HL@ HL_FOR = @HL_FOR@ HSIZE_T = @HSIZE_T@ HSSIZE_T = @HSSIZE_T@ +IGNORE_DISABLED_FILE_LOCKS = @IGNORE_DISABLED_FILE_LOCKS@ INSTALL = @INSTALL@ INSTALL_DATA = @INSTALL_DATA@ INSTALL_PROGRAM = @INSTALL_PROGRAM@ @@ -560,6 +608,7 @@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MAP_API = @MAP_API@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ +MIRROR_VFD = @MIRROR_VFD@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -596,6 +645,7 @@ PATH_SEPARATOR = @PATH_SEPARATOR@ PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ +RECURSIVE_RW_LOCKS = @RECURSIVE_RW_LOCKS@ ROOT = @ROOT@ ROS3_VFD = @ROS3_VFD@ RUNPARALLEL = @RUNPARALLEL@ @@ -619,6 +669,7 @@ TIME = @TIME@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ +USE_FILE_LOCKING = @USE_FILE_LOCKING@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ @@ -711,15 +762,15 @@ LIBH5_HL = $(top_builddir)/hl/src/libhdf5_hl.la LIBH5F_HL = $(top_builddir)/hl/fortran/src/libhdf5hl_fortran.la LIBH5CPP_HL = $(top_builddir)/hl/c++/src/libhdf5_hl_cpp.la -# Note that in svn revision 19400 the '/' after DESTDIR in H5* variables below -# has been removed. According to the official description of DESTDIR by Gnu at -# http://www.gnu.org/prep/standards/html_node/DESTDIR.html, DESTDIR is -# prepended to the normal and complete install path that it precedes for the -# purpose of installing in a temporary directory which is useful for building -# rpms and other packages. The '/' after ${DESTDIR} will be followed by another -# '/' at the beginning of the normal install path. When DESTDIR is empty the -# path then begins with '//', which is incorrect and causes problems at least for -# Cygwin. +# Note that in svn revision 19400 the '/' after DESTDIR in H5* variables below +# has been removed. According to the official description of DESTDIR by Gnu at +# http://www.gnu.org/prep/standards/html_node/DESTDIR.html, DESTDIR is +# prepended to the normal and complete install path that it precedes for the +# purpose of installing in a temporary directory which is useful for building +# rpms and other packages. The '/' after ${DESTDIR} will be followed by another +# '/' at the beginning of the normal install path. When DESTDIR is empty the +# path then begins with '//', which is incorrect and causes problems at least for +# Cygwin. # Scripts used to build examples # If only shared libraries have been installed, have h5cc build examples with @@ -769,7 +820,7 @@ LIB = $(lib_LIBRARIES) $(lib_LTLIBRARIES) $(noinst_LIBRARIES) \ PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS) \ $(EXTRA_PROG) -chk_TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) +chk_TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) TEST_EXTENSIONS = .sh SH_LOG_COMPILER = $(SHELL) AM_SH_LOG_FLAGS = @@ -1249,9 +1300,9 @@ uninstall-am: # commands that should be executed even if a file with the same name already # exists. .PHONY: build-check-clean build-check-p build-check-s build-lib build-progs \ - build-tests check-clean check-install check-p check-s check-vfd \ - check-passthrough-vol install-doc lib progs tests uninstall-doc \ - _exec_check-s _test help + build-tests check-clean check-install check-p check-s check-vfd \ + check-passthrough-vol install-doc lib progs tests uninstall-doc \ + _exec_check-s _test help trace doxygen help: @$(top_srcdir)/bin/makehelp diff --git a/c++/test/dsets.cpp b/c++/test/dsets.cpp index 0116d6c..52e3e73 100644 --- a/c++/test/dsets.cpp +++ b/c++/test/dsets.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -23,11 +23,7 @@ ***************************************************************************/ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cerr; using std::endl; @@ -46,6 +42,8 @@ const H5std_string DSET_SIMPLE_IO_NAME("simple_io"); const H5std_string DSET_TCONV_NAME("tconv"); const H5std_string DSET_COMPRESS_NAME("compressed"); const H5std_string DSET_BOGUS_NAME("bogus"); +const H5std_string DSET_OPERATOR("testing operator="); +const H5std_string DSET_OPERATOR_PATH("/testing operator="); /* Temporary filter IDs used for testing */ const int H5Z_FILTER_BOGUS = 305; @@ -62,9 +60,6 @@ static size_t filter_bogus(unsigned int flags, size_t cd_nelmts, const unsigned * Return Success: 0 * * Failure: -1 - * - * Programmer Binh-Minh Ribler (using C version) - * Friday, January 5, 2001 *------------------------------------------------------------------------- */ static herr_t @@ -188,9 +183,6 @@ test_create(H5File &file) * Return Success: 0 * * Failure: -1 - * - * Programmer Binh-Minh Ribler (using C version) - * Friday, January 5, 2001 *------------------------------------------------------------------------- */ static herr_t @@ -267,9 +259,6 @@ test_simple_io(H5File &file) * Return Success: 0 * * Failure: -1 - * - * Programmer Binh-Minh Ribler - * Thursday, March 22, 2012 *------------------------------------------------------------------------- */ static herr_t @@ -329,9 +318,6 @@ test_datasize(FileAccPropList &fapl) * Return Success: 0 * * Failure: -1 - * - * Programmer Binh-Minh Ribler (using C version) - * Friday, January 5, 2001 *------------------------------------------------------------------------- */ static herr_t @@ -398,13 +384,13 @@ test_tconv(H5File &file) /* This message derives from H5Z */ const H5Z_class2_t H5Z_BOGUS[1] = {{ - H5Z_CLASS_T_VERS, /* H5Z_class_t version number */ - H5Z_FILTER_BOGUS, /* Filter id number */ - 1, 1, /* Encode and decode enabled */ - "bogus", /* Filter name for debugging */ - NULL, /* The "can apply" callback */ - NULL, /* The "set local" callback */ - (H5Z_func_t)filter_bogus, /* The actual filter function */ + H5Z_CLASS_T_VERS, /* H5Z_class_t version number */ + H5Z_FILTER_BOGUS, /* Filter id number */ + 1, 1, /* Encode and decode enabled */ + "bogus", /* Filter name for debugging */ + NULL, /* The "can apply" callback */ + NULL, /* The "set local" callback */ + filter_bogus, /* The actual filter function */ }}; /*------------------------------------------------------------------------- @@ -439,9 +425,6 @@ filter_bogus(unsigned int flags, size_t cd_nelmts, const unsigned int cd_values[ * Return Success: 0 * * Failure: -1 - * - * Programmer Binh-Minh Ribler (using C version) - * Friday, January 5, 2001 *------------------------------------------------------------------------- */ static herr_t @@ -712,10 +695,6 @@ test_compression(H5File &file) * Return Success: 0 * * Failure: -1 - * - * Programmer Binh-Minh Ribler - * Friday, April 22, 2016 - * *------------------------------------------------------------------------- */ const H5std_string DSET_NBIT_NAME("nbit_dataset"); @@ -827,9 +806,6 @@ test_nbit_compression(H5File &file) * Return Success: 0 * * Failure: -1 - * - * Programmer Binh-Minh Ribler (using C version) - * Saturday, February 17, 2001 *------------------------------------------------------------------------- */ static herr_t @@ -903,9 +879,6 @@ test_multiopen(H5File &file) * Return Success: 0 * * Failure: -1 - * - * Programmer Binh-Minh Ribler (using C version) - * February 17, 2001 *------------------------------------------------------------------------- */ static herr_t @@ -1161,7 +1134,7 @@ const int RANK1 = 1; const H5std_string FILE_ACCPLIST("test_accplist.h5"); static herr_t -test_chunk_cache(FileAccPropList fapl) +test_chunk_cache(const FileAccPropList &fapl) { SUBTEST("DSetAccPropList::set/getChunkCache"); @@ -1173,7 +1146,7 @@ test_chunk_cache(FileAccPropList fapl) // Verify that chunk cache parameters are the same int mdc_nelmts = 0; size_t nslots_1 = 0, nslots_4 = 0, nbytes_1 = 0, nbytes_4 = 0; - double w0_1 = 0.0F, w0_4 = 0.0F; + double w0_1 = 0.0, w0_4 = 0.0; fapl_def.getCache(mdc_nelmts, nslots_1, nbytes_1, w0_1); dapl.getChunkCache(nslots_4, nbytes_4, w0_4); verify_val(nslots_1, nslots_4, "DSetAccPropList::getChunkCache", __LINE__, __FILE__); @@ -1191,7 +1164,7 @@ test_chunk_cache(FileAccPropList fapl) // Set new rdcc settings on fapl local size_t nslots_2 = nslots_1 * 2; size_t nbytes_2 = nbytes_1 * 2; - double w0_2 = w0_1 / (double)2.0F; + double w0_2 = w0_1 / 2.0; fapl_local.getCache(mdc_nelmts, nslots_2, nbytes_2, w0_2); // Create a new file using default fcpl and the passed-in fapl @@ -1262,10 +1235,6 @@ test_chunk_cache(FileAccPropList fapl) * * Return Success: 0 * Failure: number of errors - * - * Programmer Binh-Minh Ribler - * Friday, March 10, 2017 - * *------------------------------------------------------------------------- */ const int RANK = 2; @@ -1332,6 +1301,60 @@ test_virtual() } // test_virtual /*------------------------------------------------------------------------- + * Function: test_operator + * + * Purpose Tests DataSet::operator= + * + * Return Success: 0 + * + * Failure: -1 + *------------------------------------------------------------------------- + */ +static herr_t +test_operator(H5File &file) +{ + SUBTEST("DataSet::operator="); + + try { + // Create a data space + hsize_t dims[2]; + dims[0] = 256; + dims[1] = 512; + DataSpace space(2, dims, NULL); + + // Create a dataset using the default dataset creation properties. + // We're not sure what they are, so we won't check. + DataSet dataset = file.createDataSet(DSET_OPERATOR, PredType::NATIVE_DOUBLE, space); + + // Add a comment to the dataset + file.setComment(DSET_OPERATOR, "Dataset using operator="); + + // Close the dataset + dataset.close(); + + // Re-open the dataset + DataSet another_dataset(file.openDataSet(DSET_OPERATOR)); + + // Try operator= to make another dataset + DataSet copied_dataset = another_dataset; + + H5std_string copied_dataset_name = copied_dataset.getObjName(); + H5std_string another_dataset_name = another_dataset.getObjName(); + + PASSED(); + return 0; + } // try block + + // catch all other exceptions + catch (Exception &E) { + issue_fail_msg("test_operator", __LINE__, __FILE__); + + // clean up and return with failure + return -1; + } +} // test_operator + +/*------------------------------------------------------------------------- * Function: test_dset * * Purpose Tests the dataset interface (H5D) @@ -1340,9 +1363,6 @@ test_virtual() * * Failure: -1 * - * Programmer Binh-Minh Ribler (using C version) - * Friday, January 5, 2001 - * * Modifications: * Nov 12, 01: * - moved h5_cleanup to outside of try block because @@ -1380,6 +1400,7 @@ test_dset() nerrors += test_multiopen(file) < 0 ? 1 : 0; nerrors += test_types(file) < 0 ? 1 : 0; nerrors += test_virtual() < 0 ? 1 : 0; + nerrors += test_operator(file) < 0 ? 1 : 0; nerrors += test_chunk_cache(fapl) < 0 ? 1 : 0; // Close group "emit diagnostics". diff --git a/c++/test/h5cpputil.cpp b/c++/test/h5cpputil.cpp index 960e9c9..78169b2 100644 --- a/c++/test/h5cpputil.cpp +++ b/c++/test/h5cpputil.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -19,11 +19,7 @@ ***************************************************************************/ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cerr; using std::endl; @@ -218,7 +214,7 @@ InvalidActionException::InvalidActionException() : Exception() // func - IN: Name of the function where failure should occur // message - IN: Message //-------------------------------------------------------------------------- -InvalidActionException::InvalidActionException(const H5std_string func, const H5std_string message) +InvalidActionException::InvalidActionException(const H5std_string &func, const H5std_string &message) : Exception(func, message) { } @@ -247,7 +243,7 @@ TestFailedException::TestFailedException() : Exception() // func - IN: Name of the function where failure should occur // message - IN: Message //-------------------------------------------------------------------------- -TestFailedException::TestFailedException(const H5std_string func, const H5std_string message) +TestFailedException::TestFailedException(const H5std_string &func, const H5std_string &message) : Exception(func, message) { } diff --git a/c++/test/h5cpputil.h b/c++/test/h5cpputil.h index 97ed00b..444bc68 100644 --- a/c++/test/h5cpputil.h +++ b/c++/test/h5cpputil.h @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -19,8 +19,8 @@ ***************************************************************************/ -#ifndef _h5cpputil_h -#define _h5cpputil_h +#ifndef H5cpputil_H +#define H5cpputil_H #include "h5test.h" @@ -48,14 +48,14 @@ void issue_fail_msg(const char *where, int line, const char *file_name, const ch class InvalidActionException : public Exception { public: - InvalidActionException(const H5std_string func_name, const H5std_string message = DEFAULT_MSG); + InvalidActionException(const H5std_string &func_name, const H5std_string &message = DEFAULT_MSG); InvalidActionException(); virtual ~InvalidActionException() throw(); }; class TestFailedException : public Exception { public: - TestFailedException(const H5std_string func_name, const H5std_string message = DEFAULT_MSG); + TestFailedException(const H5std_string &func_name, const H5std_string &message = DEFAULT_MSG); TestFailedException(); virtual ~TestFailedException() throw(); }; diff --git a/c++/test/tarray.cpp b/c++/test/tarray.cpp index c61388d..7525c5f 100644 --- a/c++/test/tarray.cpp +++ b/c++/test/tarray.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -16,11 +16,7 @@ tarray.cpp - HDF5 C++ testing the array datatype functionality ***************************************************************************/ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cerr; using std::endl; @@ -85,7 +81,7 @@ test_array_compound_array() // Initialize array data to write for (idxi = 0; idxi < SPACE1_DIM1; idxi++) for (idxj = 0; idxj < ARRAY1_DIM1; idxj++) { - wdata[idxi][idxj].i = idxi * 10 + idxj; + wdata[idxi][idxj].i = static_cast<int>(idxi * 10 + idxj); for (idxk = 0; idxk < ARRAY1_DIM1; idxk++) { float temp = idxi * 10.0 + idxj * 2.5 + idxk; wdata[idxi][idxj].f[idxk] = temp; @@ -182,8 +178,9 @@ test_array_compound_array() // Check the array dimensions for (ii = 0; ii < ndims; ii++) if (rdims1[ii] != tdims1[ii]) { - TestErrPrintf("Array dimension information doesn't match!, rdims1[%d]=%zd, tdims1[%d]=z%d\n", - ii, rdims1[ii], ii, tdims1[ii]); + TestErrPrintf( + "Array dimension information doesn't match!, rdims1[%d]=%lld, tdims1[%d]=%lld\n", ii, + rdims1[ii], ii, tdims1[ii]); continue; } // end if @@ -200,8 +197,9 @@ test_array_compound_array() // Check the array dimensions for (ii = 0; ii < ndims; ii++) if (rdims1[ii] != tdims1[ii]) { - TestErrPrintf("Array dimension information doesn't match!, rdims1[%d]=%zd, tdims1[%d]=%zd\n", - ii, rdims1[ii], ii, tdims1[ii]); + TestErrPrintf( + "Array dimension information doesn't match!, rdims1[%d]=%lld, tdims1[%d]=%lld\n", ii, + rdims1[ii], ii, tdims1[ii]); continue; } // end if @@ -250,8 +248,9 @@ test_array_compound_array() // Check the array dimensions for (ii = 0; ii < ndims; ii++) if (rdims1[ii] != tdims1[ii]) { - TestErrPrintf("Array dimension information doesn't match!, rdims1[%d]=%zd, tdims1[%d]=%zd\n", - ii, rdims1[ii], ii, tdims1[ii]); + TestErrPrintf( + "Array dimension information doesn't match!, rdims1[%d]=%lld, tdims1[%d]=%lld\n", ii, + rdims1[ii], ii, tdims1[ii]); continue; } // end if @@ -266,9 +265,9 @@ test_array_compound_array() for (idxi = 0; idxi < SPACE1_DIM1; idxi++) { for (idxj = 0; idxj < ARRAY1_DIM1; idxj++) { if (wdata[idxi][idxj].i != rdata[idxi][idxj].i) { - TestErrPrintf( - "Array data information doesn't match!, wdata[%d][%d].i=%d, rdata[%d][%d].i=%d\n", - idxi, idxj, wdata[idxi][idxj].i, idxi, idxj, rdata[idxi][idxj].i); + TestErrPrintf("Array data information doesn't match!, wdata[%lld][%lld].i=%d, " + "rdata[%lld][%lld].i=%d\n", + idxi, idxj, wdata[idxi][idxj].i, idxi, idxj, rdata[idxi][idxj].i); continue; } // end if } // end for @@ -378,7 +377,6 @@ test_array_info() float f[ARRAY1_DIM1]; } s1_t; s1_t wdata[SPACE1_DIM1][ARRAY1_DIM1]; // Information to write - s1_t rdata[SPACE1_DIM1][ARRAY1_DIM1]; // Information read in hsize_t sdims1[] = {SPACE1_DIM1}; hsize_t tdims1[] = {ARRAY1_DIM1}; int ii; // counting variables @@ -388,7 +386,7 @@ test_array_info() // Initialize array data to write for (idxi = 0; idxi < SPACE1_DIM1; idxi++) for (idxj = 0; idxj < ARRAY1_DIM1; idxj++) { - wdata[idxi][idxj].i = idxi * 10 + idxj; + wdata[idxi][idxj].i = static_cast<int>(idxi * 10 + idxj); for (idxk = 0; idxk < ARRAY1_DIM1; idxk++) { float temp = idxi * 10.0 + idxj * 2.5 + idxk; wdata[idxi][idxj].f[idxk] = temp; @@ -460,7 +458,7 @@ test_array_info() for (ii = 0; ii < ndims; ii++) if (rdims1[ii] != tdims1[ii]) { TestErrPrintf( - "Array dimension information doesn't match!, rdims1[%d]=%zd, tdims1[%d]=z%d\n", ii, + "Array dimension information doesn't match!, rdims1[%d]=%llu, tdims1[%d]=z%llu\n", ii, rdims1[ii], ii, tdims1[ii]); continue; } // end if diff --git a/c++/test/tattr.cpp b/c++/test/tattr.cpp index 2290fff..adaa237 100644 --- a/c++/test/tattr.cpp +++ b/c++/test/tattr.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -17,11 +17,7 @@ C attribute interface (H5A) ***************************************************************************/ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cerr; using std::endl; @@ -173,8 +169,8 @@ test_attr_basic_write() // Verify values read in for (i = 0; i < ATTR1_DIM1; i++) if (attr_data1[i] != read_data1[i]) - TestErrPrintf("%d: attribute data different: attr_data1[%d]=%d,read_data1[%d]=%d\n", __LINE__, - i, attr_data1[i], i, read_data1[i]); + TestErrPrintf("%d: attribute data different: attr_data1[%llu]=%d,read_data1[%llu]=%d\n", + __LINE__, i, attr_data1[i], i, read_data1[i]); // Create two more attributes for this dataset, but only write to one. Attribute ds_attr2 = dataset.createAttribute(ATTR2_NAME, PredType::NATIVE_INT, att_space); @@ -189,7 +185,7 @@ test_attr_basic_write() // Verify values read in for (i = 0; i < ATTR1_DIM1; i++) if (attr_data1a[i] != read_data1[i]) - TestErrPrintf("%d: attribute data different: attr_data1a[%d]=%d,read_data1[%d]=%d\n", + TestErrPrintf("%d: attribute data different: attr_data1a[%llu]=%d,read_data1[%llu]=%d\n", __LINE__, i, attr_data1a[i], i, read_data1[i]); // Close both attributes @@ -452,8 +448,8 @@ test_attr_rename() // Verify values read in for (i = 0; i < ATTR1_DIM1; i++) if (attr_data1[i] != read_data1[i]) - TestErrPrintf("%d: attribute data different: attr_data1[%d]=%d,read_data1[%d]=%d\n", __LINE__, - i, attr_data1[i], i, read_data1[i]); + TestErrPrintf("%d: attribute data different: attr_data1[%llu]=%d,read_data1[%llu%d\n", + __LINE__, i, attr_data1[i], i, read_data1[i]); // Close attribute attr1.close(); @@ -476,7 +472,7 @@ test_attr_rename() // Verify values read in for (i = 0; i < ATTR1_DIM1; i++) if (attr_data1a[i] != read_data1[i]) - TestErrPrintf("%d: attribute data different: attr_data1a[%d]=%d,read_data1[%d]=%d\n", + TestErrPrintf("%d: attribute data different: attr_data1a[%llu]=%d,read_data1[%llu]=%d\n", __LINE__, i, attr_data1a[i], i, read_data1[i]); // Close attribute @@ -541,7 +537,7 @@ test_attr_basic_read() // Verify values read in for (i = 0; i < ATTR1_DIM1; i++) if (attr_data1[i] != read_data1[i]) - TestErrPrintf("%d: attribute data different: attr_data1[%d]=%d, read_data1[%d]=%d\n", + TestErrPrintf("%d: attribute data different: attr_data1[%llu]=%d, read_data1[%llu]=%d\n", __LINE__, i, attr_data1[i], i, read_data1[i]); /* @@ -572,9 +568,9 @@ test_attr_basic_read() for (i = 0; i < ATTR2_DIM1; i++) for (j = 0; j < ATTR2_DIM2; j++) if (attr_data2[i][j] != read_data2[i][j]) { - TestErrPrintf( - "%d: attribute data different: attr_data2[%d][%d]=%d, read_data2[%d][%d]=%d\n", - __LINE__, i, j, attr_data2[i][j], i, j, read_data2[i][j]); + TestErrPrintf("%d: attribute data different: attr_data2[%llu][%llu]=%d, " + "read_data2[%llu][%llu]=%d\n", + __LINE__, i, j, attr_data2[i][j], i, j, read_data2[i][j]); } PASSED(); } // end try block @@ -775,16 +771,16 @@ test_attr_compound_read() hsize_t ii, jj; for (ii = 0; ii < ATTR4_DIM1; ii++) for (jj = 0; jj < ATTR4_DIM2; jj++) - if (HDmemcmp(&attr_data4[ii][jj], &read_data4[ii][jj], sizeof(struct attr4_struct))) { - TestErrPrintf( - "%d:attribute data different: attr_data4[%d][%d].i=%d, read_data4[%d][%d].i=%d\n", - __LINE__, ii, jj, attr_data4[ii][jj].i, ii, jj, read_data4[ii][jj].i); - TestErrPrintf( - "%d:attribute data different: attr_data4[%d][%d].d=%f, read_data4[%d][%d].d=%f\n", - __LINE__, ii, jj, attr_data4[ii][jj].d, ii, jj, read_data4[ii][jj].d); - TestErrPrintf( - "%d:attribute data different: attr_data4[%d][%d].c=%c, read_data4[%d][%d].c=%c\n", - __LINE__, ii, jj, attr_data4[ii][jj].c, ii, jj, read_data4[ii][jj].c); + if (HDmemcmp(&attr_data4[ii][jj], &read_data4[ii][jj], sizeof(struct attr4_struct)) != 0) { + TestErrPrintf("%d:attribute data different: attr_data4[%llu][%llu].i=%d, " + "read_data4[%llu][%llu].i=%d\n", + __LINE__, ii, jj, attr_data4[ii][jj].i, ii, jj, read_data4[ii][jj].i); + TestErrPrintf("%d:attribute data different: attr_data4[%llu][%llu].d=%f, " + "read_data4[%llu][%llu].d=%f\n", + __LINE__, ii, jj, attr_data4[ii][jj].d, ii, jj, read_data4[ii][jj].d); + TestErrPrintf("%d:attribute data different: attr_data4[%llu][%llu].c=%c, " + "read_data4[%llu][%llu].c=%c\n", + __LINE__, ii, jj, attr_data4[ii][jj].c, ii, jj, read_data4[ii][jj].c); } /* end if */ // Verify name @@ -1048,7 +1044,7 @@ test_attr_mult_read() hsize_t dims[ATTR_MAX_DIMS]; // Attribute dimensions int ndims = space.getSimpleExtentDims(dims); if ((long)dims[0] != (long)ATTR1_DIM1) - TestErrPrintf("%d:attribute dimensions different: dims[0]=%d, should be %d\n", __LINE__, + TestErrPrintf("%d:attribute dimensions different: dims[0]=%d, should be %llu\n", __LINE__, (int)dims[0], ATTR1_DIM1); /* Verify Datatype */ @@ -1076,8 +1072,8 @@ test_attr_mult_read() // Verify values read in for (i = 0; i < ATTR1_DIM1; i++) if (attr_data1[i] != read_data1[i]) - TestErrPrintf("%d: attribute data different: attr_data1[%d]=%d,read_data1[%d]=%d\n", __LINE__, - i, attr_data1[i], i, read_data1[i]); + TestErrPrintf("%d: attribute data different: attr_data1[%llu]=%d,read_data1[%llu]=%d\n", + __LINE__, i, attr_data1[i], i, read_data1[i]); // Verify Name H5std_string attr_name = attr.getName(); @@ -1131,9 +1127,9 @@ test_attr_mult_read() for (i = 0; i < ATTR2_DIM1; i++) for (j = 0; j < ATTR2_DIM2; j++) if (attr_data2[i][j] != read_data2[i][j]) - TestErrPrintf( - "%d: attribute data different: attr_data2[%d][%d]=%d, read_data2[%d][%d]=%d\n", - __LINE__, i, j, attr_data2[i][j], i, j, read_data2[i][j]); + TestErrPrintf("%d: attribute data different: attr_data2[%llu][%llu]=%d, " + "read_data2[%llu][%llu]=%d\n", + __LINE__, i, j, attr_data2[i][j], i, j, read_data2[i][j]); // Verify Name attr_name = attr.getName(); @@ -1186,8 +1182,8 @@ test_attr_mult_read() for (j = 0; j < ATTR3_DIM2; j++) for (k = 0; k < ATTR3_DIM3; k++) if (attr_data3[i][j][k] != read_data3[i][j][k]) - TestErrPrintf("%d: attribute data different: attr_data3[%d][%d][%d]=%f, " - "read_data3[%d][%d][%d]=%f\n", + TestErrPrintf("%d: attribute data different: attr_data3[%llu][%llu][%llu]=%f, " + "read_data3[%llu][%llu][%llu]=%f\n", __LINE__, i, j, k, attr_data3[i][j][k], i, j, k, read_data3[i][j][k]); // Verify Name diff --git a/c++/test/tcompound.cpp b/c++/test/tcompound.cpp index 7b48a78..82c21e8 100644 --- a/c++/test/tcompound.cpp +++ b/c++/test/tcompound.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -16,11 +16,7 @@ tcompound.cpp - HDF5 C++ testing the compound data type functionality ***************************************************************************/ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cerr; using std::endl; @@ -491,7 +487,7 @@ test_compound_5() int_array.close(); /* Check results */ - if (memcmp(src[1].name, dst[1].name, sizeof(src[1].name)) || src[1].tdim != dst[1].tdim || + if (memcmp(src[1].name, dst[1].name, sizeof(src[1].name)) != 0 || src[1].tdim != dst[1].tdim || src[1].coll_ids[0] != dst[1].coll_ids[0] || src[1].coll_ids[1] != dst[1].coll_ids[1] || src[1].coll_ids[2] != dst[1].coll_ids[2] || src[1].coll_ids[3] != dst[1].coll_ids[3]) { H5_FAILED(); diff --git a/c++/test/tdspl.cpp b/c++/test/tdspl.cpp index 4cdf408..257233e 100644 --- a/c++/test/tdspl.cpp +++ b/c++/test/tdspl.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -17,11 +17,7 @@ list functionality ***************************************************************************/ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cerr; using std::endl; diff --git a/c++/test/testhdf5.cpp b/c++/test/testhdf5.cpp index a38d36d..71428ce 100644 --- a/c++/test/testhdf5.cpp +++ b/c++/test/testhdf5.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -38,11 +38,7 @@ GetTestNumErrs() -- Retrieve the number of testing errors ***************************************************************************/ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cerr; using std::endl; diff --git a/c++/test/tfile.cpp b/c++/test/tfile.cpp index b4e5da5..5e4e91b 100644 --- a/c++/test/tfile.cpp +++ b/c++/test/tfile.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -20,11 +20,7 @@ h5_fileaccess() -- in h5test.c, returns a file access template ***************************************************************************/ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cerr; using std::endl; diff --git a/c++/test/tfilter.cpp b/c++/test/tfilter.cpp index e7788e5..e89838c 100644 --- a/c++/test/tfilter.cpp +++ b/c++/test/tfilter.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -16,11 +16,7 @@ tfilter.cpp - HDF5 C++ testing various filters and their combination. ***************************************************************************/ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cerr; using std::endl; @@ -49,20 +45,18 @@ static herr_t test_filter_internal(hid_t fid, const char *name, hid_t dcpl, /* Temporary filter IDs used for testing */ const int H5Z_FILTER_BOGUS = 305; -#if 0 // H5_ATTR_UNUSED variables caused warning, so duplicated below with NULL instead -static size_t filter_bogus(unsigned int flags, size_t cd_nelmts, - const unsigned int *cd_values, size_t nbytes, size_t *buf_size, void **buf); -#endif -static size_t filter_bogus(size_t nbytes); +static size_t filter_bogus(unsigned int flags, size_t cd_nelmts, const unsigned int *cd_values, size_t nbytes, + size_t *buf_size, void **buf); + /* This message derives from H5Z */ const H5Z_class2_t H5Z_BOGUS[1] = {{ - H5Z_CLASS_T_VERS, /* H5Z_class_t version */ - H5Z_FILTER_BOGUS, /* Filter id number */ - 1, 1, /* Encoding and decoding enabled */ - "bogus", /* Filter name for debugging */ - NULL, /* The "can apply" callback */ - NULL, /* The "set local" callback */ - (H5Z_func_t)filter_bogus, /* The actual filter function */ + H5Z_CLASS_T_VERS, /* H5Z_class_t version */ + H5Z_FILTER_BOGUS, /* Filter id number */ + 1, 1, /* Encoding and decoding enabled */ + "bogus", /* Filter name for debugging */ + NULL, /* The "can apply" callback */ + NULL, /* The "set local" callback */ + filter_bogus, /* The actual filter function */ }}; /*------------------------------------------------------------------------- @@ -79,13 +73,15 @@ const H5Z_class2_t H5Z_BOGUS[1] = {{ *------------------------------------------------------------------------- */ static size_t -#if 0 // H5_ATTR_UNUSED variables caused warning, so duplicated below with NULL instead -filter_bogus(unsigned int H5_ATTR_UNUSED flags, size_t H5_ATTR_UNUSED cd_nelmts, - const unsigned int H5_ATTR_UNUSED *cd_values, size_t nbytes, - size_t H5_ATTR_UNUSED *buf_size, void H5_ATTR_UNUSED **buf) -#endif -filter_bogus(size_t nbytes) +filter_bogus(unsigned int flags, size_t cd_nelmts, const unsigned int *cd_values, size_t nbytes, + size_t *buf_size, void **buf) { + (void)flags; + (void)cd_nelmts; + (void)cd_values; + (void)buf_size; + (void)buf; + return nbytes; } diff --git a/c++/test/th5s.cpp b/c++/test/th5s.cpp index 8709c25..9952e68 100644 --- a/c++/test/th5s.cpp +++ b/c++/test/th5s.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -19,11 +19,7 @@ EXTERNAL ROUTINES/VARIABLES: ***************************************************************************/ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cerr; using std::endl; @@ -516,7 +512,7 @@ test_h5s_compound_scalar_read() dataset.read(&rdata, type); // Verify read data - if (HDmemcmp(&space4_data, &rdata, sizeof(struct space4_struct))) { + if (HDmemcmp(&space4_data, &rdata, sizeof(struct space4_struct)) != 0) { cerr << "scalar data different: space4_data.c1=" << space4_data.c1 << ", read_data4.c1=" << rdata.c1 << endl; cerr << "scalar data different: space4_data.u=" << space4_data.u << ", read_data4.u=" << rdata.u diff --git a/c++/test/titerate.cpp b/c++/test/titerate.cpp index 83229b9..17620ca 100644 --- a/c++/test/titerate.cpp +++ b/c++/test/titerate.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -16,11 +16,7 @@ titerate.cpp - HDF5 C++ testing iterate related functionality ***************************************************************************/ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cerr; using std::endl; diff --git a/c++/test/tlinks.cpp b/c++/test/tlinks.cpp index 8690ac2..e8dad5b 100644 --- a/c++/test/tlinks.cpp +++ b/c++/test/tlinks.cpp @@ -5,7 +5,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -16,11 +16,7 @@ C link interface (H5L) ***************************************************************************/ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cerr; using std::endl; @@ -593,7 +589,7 @@ visit_obj_cb(H5Object &obj, const H5std_string name, const H5O_info2_t *oinfo, v ovisit_ud_t *op_data = static_cast<ovisit_ud_t *>(_op_data); // Check for correct object information - if (strcmp(op_data->info[op_data->idx].path, name.c_str())) + if (strcmp(op_data->info[op_data->idx].path, name.c_str()) != 0) return (H5_ITER_ERROR); if (op_data->info[op_data->idx].type != oinfo->type) return (H5_ITER_ERROR); diff --git a/c++/test/tobject.cpp b/c++/test/tobject.cpp index 10efe89..5892f39 100644 --- a/c++/test/tobject.cpp +++ b/c++/test/tobject.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -16,11 +16,7 @@ tobject.cpp - HDF5 C++ testing object related functionality ***************************************************************************/ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif #include <string> #include "H5Cpp.h" // C++ API header file @@ -423,8 +419,7 @@ const H5std_string DSETNAME("dataset"); static void test_open_object_header() { - hsize_t dims[2]; - H5G_info_t ginfo; /* Group info struct */ + hsize_t dims[2]; // Output message about test being performed SUBTEST("Group::getObjId"); @@ -479,6 +474,7 @@ test_open_object_header() dset.setId(obj_dset); dspace = dset.getSpace(); bool is_simple = dspace.isSimple(); + verify_val(is_simple, true, "isSimple", __LINE__, __FILE__); dspace.close(); // Open datatype object from the group diff --git a/c++/test/trefer.cpp b/c++/test/trefer.cpp index beba36a..939b0ee 100644 --- a/c++/test/trefer.cpp +++ b/c++/test/trefer.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -17,11 +17,7 @@ Reference interface (H5R) ***************************************************************************/ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cerr; using std::endl; diff --git a/c++/test/ttypes.cpp b/c++/test/ttypes.cpp index 7858757..a244965 100644 --- a/c++/test/ttypes.cpp +++ b/c++/test/ttypes.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -16,11 +16,7 @@ ttypes.cpp - HDF5 C++ testing the general datatype functionality ***************************************************************************/ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cerr; using std::endl; @@ -399,7 +395,7 @@ test_vltype() // Verify that the copied type has a valid id bool is_valid = IdComponent::isValid(vltype2.getId()); - verify_val(in_class, true, "isValid on vltype2", __LINE__, __FILE__); + verify_val(is_valid, true, "isValid on vltype2", __LINE__, __FILE__); in_class = vltype2.detectClass(H5T_VLEN); verify_val(in_class, true, "VarLenType::detectClass() with H5T_VLEN for vltype2", __LINE__, __FILE__); @@ -730,8 +726,11 @@ test_named() // It should be possible to define an attribute for the named type Attribute attr1 = itype.createAttribute("attr1", PredType::NATIVE_UCHAR, space); - for (i = 0; i < ds_size[0] * ds_size[1]; i++) - attr_data[0][i] = (int)i; /*tricky*/ + for (hsize_t i = 0; i < ds_size[0]; i++) { + for (hsize_t j = 0; j < ds_size[1]; j++) { + attr_data[i][j] = static_cast<unsigned>(i * ds_size[1] + j); + } + } attr1.write(PredType::NATIVE_UINT, attr_data); attr1.close(); @@ -1017,8 +1016,8 @@ test_encode_decode() FloatType decoded_flttyp(decoded_flt_ptr->getId()); verify_val(flttyp == decoded_flttyp, true, "DataType::decode", __LINE__, __FILE__); - H5std_string norm_string; - H5T_norm_t mant_norm = decoded_flttyp.getNorm(norm_string); + // H5std_string norm_string; + // H5T_norm_t mant_norm = decoded_flttyp.getNorm(norm_string); // verify_val(decoded_flttyp.isVariableStr(), true, "DataType::decode", __LINE__, __FILE__); delete decoded_flt_ptr; diff --git a/c++/test/tvlstr.cpp b/c++/test/tvlstr.cpp index 8f0c0ab..b371518 100644 --- a/c++/test/tvlstr.cpp +++ b/c++/test/tvlstr.cpp @@ -6,7 +6,7 @@ * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * - * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ @@ -18,11 +18,7 @@ EXTERNAL ROUTINES/VARIABLES: ***************************************************************************/ -#ifdef OLD_HEADER_FILENAME -#include <iostream.h> -#else #include <iostream> -#endif using std::cerr; using std::endl; @@ -187,7 +183,7 @@ test_vlstring_dataset() // Test scalar type dataset with 1 value. dset1 = root.createDataSet("test_scalar_small", vlst, ds_space); - dynstring_ds_write = (char *)HDcalloc(1, sizeof(char)); + dynstring_ds_write = (char *)HDcalloc(2, sizeof(char)); HDmemset(dynstring_ds_write, 'A', 1); // Write data to the dataset, then read it back. @@ -865,7 +861,7 @@ read_scalar_dset(H5File &file, DataType &type, DataSpace &space, char *name, cha dset.read(&data_read, type, space, space); dset.close(); - if (HDstrcmp(data, data_read)) + if (HDstrcmp(data, data_read) != 0) TestErrPrintf("Expected %s for dataset %s but read %s\n", data, name, data_read); HDfree(data_read); |